BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039151
(279 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476949|ref|XP_002282659.2| PREDICTED: carbamoyl-phosphate synthase small chain [Vitis
vinifera]
gi|296088611|emb|CBI37602.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/279 (86%), Positives = 262/279 (93%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 47 RPWKTSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 106
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEES QCFLAGLVIRSLSIGTSNWRCAETLG+YLAERNIMGIYDVDTRA
Sbjct: 107 PHIGNTGVNFDDEESSQCFLAGLVIRSLSIGTSNWRCAETLGDYLAERNIMGIYDVDTRA 166
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSLIGVLSTE+SK+D+ELL++S SWDIVG+DLIS VS P+EWV+ T +W
Sbjct: 167 ITRRLRQDGSLIGVLSTEDSKTDEELLKISCSWDIVGVDLISGVSCNSPYEWVDKTGSEW 226
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN++E +T+RVIAYDFGIKHNILRRLASYGC+I VVPSTWPASETLK+KPDGVLFSN
Sbjct: 227 DFNSNETAGETFRVIAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSN 286
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKE+LGKVPVFGICMGHQLLGQALG
Sbjct: 287 GPGDPSAVPYAVETVKEILGKVPVFGICMGHQLLGQALG 325
>gi|21535793|emb|CAC85725.1| putative carbamoyl phosphate synthase small subunit [Nicotiana
tabacum]
Length = 432
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/279 (86%), Positives = 258/279 (92%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW VA+ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 53 RPWKVADARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 112
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNF DEES QCFLAGLVIRSLSI TSNWRC ETL YLA+RNIMGIYDVDTRA
Sbjct: 113 PHIGNTGVNFGDEESMQCFLAGLVIRSLSISTSNWRCKETLDEYLAKRNIMGIYDVDTRA 172
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSLIGVLSTE SK+D+ELLEMSR+WDIVG+DLIS VS K P+EWV+ T DW
Sbjct: 173 ITRRLRQDGSLIGVLSTENSKTDEELLEMSRTWDIVGVDLISGVSCKSPYEWVDRTASDW 232
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN + RN +T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLK+KPDGVLFSN
Sbjct: 233 DFNDNGRNKETFNVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSN 292
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKEL+GK+PVFGICMGHQLLGQALG
Sbjct: 293 GPGDPSAVPYAVEAVKELIGKIPVFGICMGHQLLGQALG 331
>gi|262181537|gb|ACY29659.1| anthranilate synthase 02 [Vitis vinifera]
Length = 426
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/279 (86%), Positives = 262/279 (93%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVL+TN
Sbjct: 47 RPWKTSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLVTN 106
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEES QCFLAGLVIRSLSIGTSNWRCAETLG+YLAERNIMGIYDVDTRA
Sbjct: 107 PHIGNTGVNFDDEESSQCFLAGLVIRSLSIGTSNWRCAETLGDYLAERNIMGIYDVDTRA 166
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSLIGVLSTE+SK+D+ELL++S SWDIVG+DLIS VS P+EWV+ T +W
Sbjct: 167 ITRRLRQDGSLIGVLSTEDSKTDEELLKISCSWDIVGVDLISGVSCNSPYEWVDKTGSEW 226
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN++E +T+RVIAYDFGIKHNILRRLASYGC+I VVPSTWPASETLK+KPDGVLFSN
Sbjct: 227 DFNSNETAGETFRVIAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSN 286
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKE+LGKVPVFGICMGHQLLGQALG
Sbjct: 287 GPGDPSAVPYAVETVKEILGKVPVFGICMGHQLLGQALG 325
>gi|255571716|ref|XP_002526801.1| Carbamoyl-phosphate synthase small chain, putative [Ricinus
communis]
gi|223533805|gb|EEF35536.1| Carbamoyl-phosphate synthase small chain, putative [Ricinus
communis]
Length = 418
Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust.
Identities = 236/279 (84%), Positives = 257/279 (92%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGA GTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 53 RPWKTSDARLVLEDGSIWKAKSFGARGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 112
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNF DEES QCFLAGLVIRSLSIGTSNWRC +TLG+YLAERNIMGIYDVDTRA
Sbjct: 113 PHIGNTGVNFGDEESTQCFLAGLVIRSLSIGTSNWRCTKTLGDYLAERNIMGIYDVDTRA 172
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLSTE+SK+D+ELL+MSRSWDIVG+DLISDVS P++WV+ T +W
Sbjct: 173 ITRRLREDGSLIGVLSTEDSKTDEELLKMSRSWDIVGVDLISDVSCTAPYKWVDPTNSEW 232
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN++ R + + V+AYDFGIKHNILRRLASYGC+I VVPS WPA ETLKLKPDGVLFSN
Sbjct: 233 DFNSNGREGEVFHVVAYDFGIKHNILRRLASYGCKITVVPSKWPALETLKLKPDGVLFSN 292
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKELLGKVPVFGICMGHQLLGQALG
Sbjct: 293 GPGDPSAVPYAVETVKELLGKVPVFGICMGHQLLGQALG 331
>gi|224137896|ref|XP_002326467.1| predicted protein [Populus trichocarpa]
gi|222833789|gb|EEE72266.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/279 (84%), Positives = 255/279 (91%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGS+WRAKSFGA GTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 12 RPWKTSDARLVLEDGSVWRAKSFGARGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 71
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEESRQCFLAGLVIRSLSI TSNWRC + LG+YL ERNIMGIYDVDTRA
Sbjct: 72 PHIGNTGVNFDDEESRQCFLAGLVIRSLSISTSNWRCTKALGDYLLERNIMGIYDVDTRA 131
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSL+GVL+TEESK+D+ELLEMSRSWDIVGIDLIS V+ P+EWV+ T P+W
Sbjct: 132 ITRRLRQDGSLVGVLTTEESKTDEELLEMSRSWDIVGIDLISGVTCTAPYEWVDKTDPEW 191
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN R + Y VIAYDFGIKHNILRRL+SYGC+I VVPS+WPASETLK+KPDGVLFSN
Sbjct: 192 DFNCEGR-GEIYHVIAYDFGIKHNILRRLSSYGCKITVVPSSWPASETLKMKPDGVLFSN 250
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVP AV VKELLGKVPVFGICMGHQLLGQALG
Sbjct: 251 GPGDPSAVPCAVKTVKELLGKVPVFGICMGHQLLGQALG 289
>gi|449435154|ref|XP_004135360.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Cucumis
sativus]
gi|449524226|ref|XP_004169124.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Cucumis
sativus]
Length = 432
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/279 (84%), Positives = 256/279 (91%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW V++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 53 RPWKVSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 112
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEE+RQCFL GLVIRSLS+ TSNWRC +TLG+YL ERNIMGIYDVDTRA
Sbjct: 113 PHIGNTGVNFDDEEARQCFLTGLVIRSLSVSTSNWRCKQTLGDYLIERNIMGIYDVDTRA 172
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLSTE+SKSD ELLEMSRSW+IVG+DLIS VS K PFEWV+ T +W
Sbjct: 173 ITRRLREDGSLIGVLSTEKSKSDDELLEMSRSWNIVGVDLISGVSCKSPFEWVDRTDLEW 232
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +S+T+ V+AYDFGIK NILRRLASYGC+I VVPSTW ASETLKL PDGVLFSN
Sbjct: 233 EFKSGGHSSETFHVVAYDFGIKSNILRRLASYGCKITVVPSTWAASETLKLNPDGVLFSN 292
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK+LLGKVPVFGICMGHQLLGQALG
Sbjct: 293 GPGDPSAVPYAVETVKQLLGKVPVFGICMGHQLLGQALG 331
>gi|284519836|gb|ADB92668.1| carbamoyl-phosphate synthase [Populus tremula x Populus alba]
Length = 400
Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/279 (84%), Positives = 252/279 (90%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGS+WRAKSFGA GTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 42 RPWKTSDARLVLEDGSVWRAKSFGARGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 101
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEESRQCFLAGLVIRSLSI TSNWRC + LG+YL ERNIMGIYDVDTRA
Sbjct: 102 PHIGNTGVNFDDEESRQCFLAGLVIRSLSISTSNWRCTKELGDYLLERNIMGIYDVDTRA 161
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSL+GVL+TEESK+D+ELL+MSRSWDI GIDLIS VS P+EWV T +W
Sbjct: 162 ITRRLRQDGSLVGVLTTEESKTDEELLKMSRSWDIEGIDLISGVSCTAPYEWVGKTDLEW 221
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN R + Y V+AYDFGIKHNILRRLASYGC+I VVPS WPASETLK+KPDGVLFSN
Sbjct: 222 DFNREGRG-EIYHVVAYDFGIKHNILRRLASYGCKITVVPSKWPASETLKMKPDGVLFSN 280
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKELLGKVPVFGICMGHQLLGQALG
Sbjct: 281 GPGDPSAVPYAVETVKELLGKVPVFGICMGHQLLGQALG 319
>gi|224074207|ref|XP_002304301.1| predicted protein [Populus trichocarpa]
gi|222841733|gb|EEE79280.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/279 (84%), Positives = 251/279 (89%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGS+WRAKSFGA GTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 50 RPWKTSDARLVLEDGSVWRAKSFGARGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 109
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEESRQCFLAGLVIRSLSI TSNWRC + LG+YL ERNIMGIYDVDTRA
Sbjct: 110 PHIGNTGVNFDDEESRQCFLAGLVIRSLSISTSNWRCTKELGDYLLERNIMGIYDVDTRA 169
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSL+GVL+TEE K+D+ELL+MSRSWDI GIDLIS VS P+EWV+ T +W
Sbjct: 170 ITRRLRQDGSLVGVLTTEELKTDEELLKMSRSWDIEGIDLISGVSCTAPYEWVDKTDLEW 229
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN R + Y VIAYDFGIKHNILRRLASYGC+I VVPS WPASE LK+KPDGVLFSN
Sbjct: 230 DFNCEGR-GEIYHVIAYDFGIKHNILRRLASYGCKITVVPSNWPASEALKMKPDGVLFSN 288
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKELLGKVPVFGICMGHQLLGQALG
Sbjct: 289 GPGDPSAVPYAVETVKELLGKVPVFGICMGHQLLGQALG 327
>gi|356512801|ref|XP_003525104.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Glycine
max]
Length = 429
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/279 (83%), Positives = 258/279 (92%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW + ARL+LEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 38 RPWKTSGARLMLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 97
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNFDDEESRQCFLAGLVIRSLSI TS+WRCAETLG+YLAERNIMGIYDVDTRA
Sbjct: 98 PHIGNTGVNFDDEESRQCFLAGLVIRSLSISTSSWRCAETLGDYLAERNIMGIYDVDTRA 157
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQ GSLIGVLST+ SK+++ELL+M+ SWDIVGIDLIS VS + EWV++TK +W
Sbjct: 158 ITRRLRQKGSLIGVLSTDNSKTEEELLKMTHSWDIVGIDLISGVSCQSVHEWVDTTKQEW 217
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DF++ + + +T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLK+KPDGVLFSN
Sbjct: 218 DFSS-KGHGETFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSN 276
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK +LGKVPVFGICMGHQLLGQALG
Sbjct: 277 GPGDPSAVPYAVETVKNILGKVPVFGICMGHQLLGQALG 315
>gi|388511022|gb|AFK43577.1| unknown [Medicago truncatula]
Length = 431
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/279 (81%), Positives = 254/279 (91%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 41 RPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 100
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES QCFL+GLVIRSLSI TSNWRC + LG+YL ERN+MGIYDVDTRA
Sbjct: 101 PHIGNTGINFDDEESTQCFLSGLVIRSLSISTSNWRCEKDLGDYLTERNVMGIYDVDTRA 160
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P EW++ T+ +W
Sbjct: 161 ITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPHEWIDRTREEW 220
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F++ E T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLKL PDGVLFSN
Sbjct: 221 EFSSSEGPRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSN 280
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 281 GPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 319
>gi|357477159|ref|XP_003608865.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
gi|217073732|gb|ACJ85226.1| unknown [Medicago truncatula]
gi|355509920|gb|AES91062.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
Length = 431
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/279 (81%), Positives = 254/279 (91%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 41 RPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 100
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES QCFL+GLVIRSLSI TSNWRC + LG+YL ERN+MGIYDVDTRA
Sbjct: 101 PHIGNTGINFDDEESTQCFLSGLVIRSLSISTSNWRCEKDLGDYLTERNVMGIYDVDTRA 160
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P EW++ T+ +W
Sbjct: 161 ITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPHEWIDRTREEW 220
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F++ E T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLKL PDGVLFSN
Sbjct: 221 EFSSSEGPRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSN 280
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 281 GPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 319
>gi|297818374|ref|XP_002877070.1| hypothetical protein ARALYDRAFT_484564 [Arabidopsis lyrata subsp.
lyrata]
gi|297322908|gb|EFH53329.1| hypothetical protein ARALYDRAFT_484564 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 227/279 (81%), Positives = 252/279 (90%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
+PW NARLVLEDGSIW AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 51 KPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTN 110
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
P IGNTGVN DDEES QCFL GLVIR+LSI TSNWRC +TL +YL ERNIMG+YD+DTRA
Sbjct: 111 PQIGNTGVNPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERNIMGVYDLDTRA 170
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVL+TE+SK+D ELL+MSRSWDIVGIDLISDVS K P+EWV+ T P+W
Sbjct: 171 ITRRLREDGSLIGVLTTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNPEW 230
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFNT+ R+ K+Y+VIAYDFGIK NILRRL+SYGCQI VVPSTWPASE LK+ PDG+LFSN
Sbjct: 231 DFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTWPASEALKMNPDGILFSN 290
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKELLGKVPV+GICMGHQLLGQALG
Sbjct: 291 GPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALG 329
>gi|222154056|gb|ACM47218.1| plastid carbamoylphosphate synthetase small subunit 1 [Medicago
truncatula]
Length = 432
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/279 (81%), Positives = 254/279 (91%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARL+LEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 42 RPWKNSDARLLLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 101
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES +CFL+GLVIRSLSI TSNWRC + LG+YL ERN+MGI DVDTRA
Sbjct: 102 PHIGNTGINFDDEESTECFLSGLVIRSLSISTSNWRCVKDLGDYLTERNVMGICDVDTRA 161
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P+EWV+ TK +W
Sbjct: 162 ITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPYEWVDRTKEEW 221
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F++ E T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLKL PDGVLFSN
Sbjct: 222 EFSSSEGPRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSN 281
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 282 GPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 320
>gi|217071810|gb|ACJ84265.1| unknown [Medicago truncatula]
gi|388495080|gb|AFK35606.1| unknown [Medicago truncatula]
Length = 435
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/283 (80%), Positives = 254/283 (89%), Gaps = 4/283 (1%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 41 RPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 100
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSI----GTSNWRCAETLGNYLAERNIMGIYDV 116
PHIGNTG+NFDDEES QCFL+GLVIRSLSI TSNWRC + LG+YL ERN+MGIYDV
Sbjct: 101 PHIGNTGINFDDEESTQCFLSGLVIRSLSIRYLFSTSNWRCEKDLGDYLTERNVMGIYDV 160
Query: 117 DTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
DTRAITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P EW++ T
Sbjct: 161 DTRAITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPHEWIDRT 220
Query: 177 KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ +W+F++ E T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLKL PDGV
Sbjct: 221 REEWEFSSSEGPRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGV 280
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
LFSNGPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 281 LFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 323
>gi|356516335|ref|XP_003526851.1| PREDICTED: carbamoyl-phosphate synthase small chain-like [Glycine
max]
Length = 438
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/279 (81%), Positives = 252/279 (90%), Gaps = 2/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 46 RPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 105
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES QCFLAGLVIRSLSI TSNWRC + LG+YLAERNIMGIYDVDTRA
Sbjct: 106 PHIGNTGINFDDEESIQCFLAGLVIRSLSISTSNWRCKKDLGDYLAERNIMGIYDVDTRA 165
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSLIGVL+T+ S++D+ELL MS+SWDIVG DLIS VS K P EWV+ TK W
Sbjct: 166 ITRRLRQDGSLIGVLTTDNSRTDEELLHMSKSWDIVGKDLISGVSCKTPHEWVDKTKQQW 225
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F+ + +T+ V+AYDFGIKHNILRRLASYGC+I VVP TWPASETLK+KP+GV+FSN
Sbjct: 226 EFS--KVPGETFHVVAYDFGIKHNILRRLASYGCKITVVPCTWPASETLKMKPNGVIFSN 283
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYA+ VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 284 GPGDPSAVPYAIETVKNIIGKVPVFGICMGHQLLGQALG 322
>gi|18405507|ref|NP_566824.1| carbamoyl phosphate synthetase A [Arabidopsis thaliana]
gi|9294479|dbj|BAB02698.1| carbamoyl-phosphate synthetase small subunit [Arabidopsis thaliana]
gi|15028109|gb|AAK76678.1| putative carbamoyl phosphate synthetase small subunit [Arabidopsis
thaliana]
gi|19310631|gb|AAL85046.1| putative carbamoyl phosphate synthetase small subunit [Arabidopsis
thaliana]
gi|332643837|gb|AEE77358.1| carbamoyl phosphate synthetase A [Arabidopsis thaliana]
Length = 430
Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/279 (80%), Positives = 251/279 (89%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
+PW NARLVLEDGSIW AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 51 KPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTN 110
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
P IGNTGVN DDEES QCFL GLVIR+LSI TSNWRC +TL +YL ER+IMG+YD+DTRA
Sbjct: 111 PQIGNTGVNPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRA 170
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLSTE+SK+D ELL+MSRSWDIVGIDLISDVS K P+EWV+ T +W
Sbjct: 171 ITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEW 230
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFNT+ R+ K+Y+VIAYDFGIK NILRRL+SYGCQI VVPST+PA+E LK+ PDG+LFSN
Sbjct: 231 DFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSN 290
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKELLGKVPV+GICMGHQLLGQALG
Sbjct: 291 GPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALG 329
>gi|359807004|ref|NP_001241589.1| uncharacterized protein LOC100788470 [Glycine max]
gi|255644591|gb|ACU22798.1| unknown [Glycine max]
Length = 438
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/279 (82%), Positives = 249/279 (89%), Gaps = 2/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 46 RPWKNSDARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 105
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES QCFLAGLVIRSLSI TSNWRC + LG+YLAERNIMGIYDVDTRA
Sbjct: 106 PHIGNTGINFDDEESIQCFLAGLVIRSLSISTSNWRCKKPLGDYLAERNIMGIYDVDTRA 165
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSLIGVLST+ SK D+ELL MS+SW+IVG DLIS VS K P EWV+ TK W
Sbjct: 166 ITRRLRQDGSLIGVLSTDNSKKDEELLHMSKSWNIVGKDLISGVSCKTPHEWVDKTKQQW 225
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F+ + + + V+AYDFGIKHNILRRLASYGC+I VVP TW ASETLK+KPDGVLFSN
Sbjct: 226 EFS--KVPGEAFHVVAYDFGIKHNILRRLASYGCKITVVPCTWSASETLKMKPDGVLFSN 283
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 284 GPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 322
>gi|2462781|gb|AAC25961.1| carbamoyl phosphate synthetase small subunit [Arabidopsis thaliana]
Length = 428
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/279 (80%), Positives = 251/279 (89%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
+PW NARLVLEDGSIW AKSFGA GT++ E+VFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 49 KPWTSYNARLVLEDGSIWPAKSFGAPGTRIAELVFNTSLTGYQEILTDPSYAGQFVLMTN 108
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
P IGNTGVN DDEES QCFL GLVIR+LSI TSNWRC +TL +YL ER+IMG+YD+DTRA
Sbjct: 109 PQIGNTGVNPDDEESGQCFLTGLVIRNLSISTSNWRCTKTLADYLTERDIMGVYDLDTRA 168
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLSTE+SK+D ELL+MSRSWDIVGIDLISDVS K P+EWV+ T +W
Sbjct: 169 ITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSCKSPYEWVDKTNAEW 228
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFNT+ R+ K+Y+VIAYDFGIK NILRRL+SYGCQI VVPST+PA+E LK+ PDG+LFSN
Sbjct: 229 DFNTNSRDGKSYKVIAYDFGIKQNILRRLSSYGCQITVVPSTFPAAEALKMNPDGILFSN 288
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VKELLGKVPV+GICMGHQLLGQALG
Sbjct: 289 GPGDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALG 327
>gi|388498956|gb|AFK37544.1| unknown [Lotus japonicus]
Length = 442
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/278 (80%), Positives = 254/278 (91%), Gaps = 1/278 (0%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
PW ++ARLVLEDGSIW+AKSFGA GTQVGEVVF+TSLTGYQEILTDPSYAGQFVLMTNP
Sbjct: 46 PWKNSDARLVLEDGSIWKAKSFGAIGTQVGEVVFDTSLTGYQEILTDPSYAGQFVLMTNP 105
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG+NFDDEESRQCFL+GLVIRSLSI TSNWRC + LG+YL ERNIMGIYDVDTRAI
Sbjct: 106 HIGNTGINFDDEESRQCFLSGLVIRSLSISTSNWRCVKDLGDYLIERNIMGIYDVDTRAI 165
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD 181
TRRLR+DGSLIGVLST+ +K+D+ELL+MS+SWDIVG+DLIS VS K P EWV++ K +W+
Sbjct: 166 TRRLREDGSLIGVLSTDNAKTDEELLQMSKSWDIVGVDLISGVSCKTPHEWVDNAKEEWE 225
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F++ + +T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLKL PDGVLFSNG
Sbjct: 226 FSS-KGPGETFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSNG 284
Query: 242 PGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 285 PGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 322
>gi|222154054|gb|ACM47217.1| plastid carbamoylphosphate synthetase small subunit 2 [Medicago
truncatula]
Length = 431
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/279 (79%), Positives = 249/279 (89%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 41 RPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 100
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES QCFL+GLVIRSLSI TSNWRC + LG+YL ERN+MGI DVDTRA
Sbjct: 101 PHIGNTGINFDDEESTQCFLSGLVIRSLSISTSNWRCEKDLGDYLTERNVMGICDVDTRA 160
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P EW++ T+ +W
Sbjct: 161 ITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPHEWIDRTREEW 220
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F++ E T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLKL PDGV F
Sbjct: 221 EFSSSEGPRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGVPFQQ 280
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 281 RPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 319
>gi|116787068|gb|ABK24362.1| unknown [Picea sitchensis]
Length = 456
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 221/279 (79%), Positives = 246/279 (88%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW A+ARLVLEDGSIW+AKSFGA GTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 76 RPWETADARLVLEDGSIWKAKSFGAKGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 135
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GLVIR+LS SNWR AETL YL +RN+MGI+DVDTRA
Sbjct: 136 PHIGNTGVNIDDEESNQCFLGGLVIRNLSTCVSNWRSAETLPEYLRKRNVMGIHDVDTRA 195
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGV+STE SKSD ELL M+RSWDIVG+DLIS V+ EP+EW ++T +W
Sbjct: 196 ITRRLREDGSLIGVISTESSKSDDELLNMARSWDIVGMDLISGVTCSEPYEWKDATSAEW 255
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DFN+H + S V+AYDFGIKHNILRR+ASYGC+I VVPSTWP+SE LKL PDGVLFSN
Sbjct: 256 DFNSHGKASDKLHVVAYDFGIKHNILRRIASYGCKITVVPSTWPSSEVLKLNPDGVLFSN 315
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK+++GK+PVFGICMGHQLLGQALG
Sbjct: 316 GPGDPSAVPYAVENVKQVVGKIPVFGICMGHQLLGQALG 354
>gi|195635437|gb|ACG37187.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/279 (77%), Positives = 250/279 (89%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEEYLTKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM++ W IVG+DLIS V+ P+EW++ T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSQTDNELLEMAKKWKIVGVDLISGVTCDAPYEWLDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F +++S+T+ V+AYDFGIKHNILRRLASYGC+I VVP+ WPASE L LKP+GVLFSN
Sbjct: 250 EFK-RDQSSETFHVVAYDFGIKHNILRRLASYGCKITVVPANWPASEVLNLKPNGVLFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|195637158|gb|ACG38047.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/279 (77%), Positives = 250/279 (89%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEEYLTKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM++ W IVG+DLIS V+ P+EW++ T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSQTDNELLEMAKKWKIVGVDLISGVTCDAPYEWLDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F +++S+T+ V+AYDFGIKHNILRRLASYGC+I VVP+ WPASE L LKP+GVLFSN
Sbjct: 250 EFK-RDQSSETFHVVAYDFGIKHNILRRLASYGCKITVVPANWPASEVLNLKPNGVLFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|297830456|ref|XP_002883110.1| carbamoyl phosphate synthetase small subunit [Arabidopsis lyrata
subsp. lyrata]
gi|297328950|gb|EFH59369.1| carbamoyl phosphate synthetase small subunit [Arabidopsis lyrata
subsp. lyrata]
Length = 433
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/277 (81%), Positives = 247/277 (89%), Gaps = 4/277 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDP---SYAGQFVLMTNPHI 63
NARLVLEDGS+W AKSFGASGT+V E+VFNTSLTGYQEILT P SYAGQFVLMTNP I
Sbjct: 56 NARLVLEDGSVWSAKSFGASGTRVAELVFNTSLTGYQEILTSPRLRSYAGQFVLMTNPQI 115
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GNTGVN DDEESRQCFLAGLVIRSLSI TSNWRC TLG+YLAERNIMGIYD+DTRAITR
Sbjct: 116 GNTGVNPDDEESRQCFLAGLVIRSLSISTSNWRCMITLGDYLAERNIMGIYDLDTRAITR 175
Query: 124 RLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
RLR+ GSL GVLST+ SK+D+ELL MSRSWDIVG+DLIS+VS K P+EWVE T P+W+FN
Sbjct: 176 RLRESGSLNGVLSTDGSKTDEELLHMSRSWDIVGLDLISNVSCKSPYEWVEKTNPEWEFN 235
Query: 184 THERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + K +YRVIAYDFGIK NILRRLASYGC+I VVPSTWPA+E L++ PDG+LFSNGP
Sbjct: 236 TTSSHHKESYRVIAYDFGIKQNILRRLASYGCEITVVPSTWPAAEALEMNPDGILFSNGP 295
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDPSAVPYAV VKELLGKVPV+GICMGHQLLGQALG
Sbjct: 296 GDPSAVPYAVETVKELLGKVPVYGICMGHQLLGQALG 332
>gi|226504602|ref|NP_001141795.1| uncharacterized protein LOC100273931 [Zea mays]
gi|194700674|gb|ACF84421.1| unknown [Zea mays]
gi|238009710|gb|ACR35890.1| unknown [Zea mays]
gi|413938493|gb|AFW73044.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/279 (76%), Positives = 249/279 (89%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEEYLTKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM++ W IVG+DLIS V+ P+EW++ T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSQTDNELLEMAKKWKIVGVDLISGVTCDAPYEWLDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F +++S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKP+GVLFSN
Sbjct: 250 EFK-RDQSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPNGVLFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V++++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQDIIGKVPVFGICMGHQLIGQALG 347
>gi|357137283|ref|XP_003570230.1| PREDICTED: carbamoyl-phosphate synthase small chain-like
[Brachypodium distachyon]
Length = 438
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 212/279 (75%), Positives = 251/279 (89%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQV EVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 62 RPWKLSDARLVLEDGSVWNAKSFGASGTQVAEVVFNTSLTGYQEILTDPSYAGQFVLMTN 121
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES +CFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 122 PHIGNTGVNPDDEESIKCFLGGLIIRNLSICTSNWRCTETLDEYLKKRNIMGIYDVDTRA 181
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S+ D+ELLEM++ W IVG+DLIS VS P+EW++ T +W
Sbjct: 182 ITRRLREDGSLIGVLSTDQSRKDEELLEMAQKWKIVGVDLISGVSCDAPYEWLDKTDSEW 241
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F ++++++T+ ++AYDFG+K NILRRLASYGC+I VVP++WPASETLKLKPDGVLFSN
Sbjct: 242 EFK-NKKSTETFHIVAYDFGVKQNILRRLASYGCKITVVPASWPASETLKLKPDGVLFSN 300
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 301 GPGDPAAVPYAVKTVQEIVGKVPVFGICMGHQLIGQALG 339
>gi|242066252|ref|XP_002454415.1| hypothetical protein SORBIDRAFT_04g030390 [Sorghum bicolor]
gi|241934246|gb|EES07391.1| hypothetical protein SORBIDRAFT_04g030390 [Sorghum bicolor]
Length = 446
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/279 (76%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESSQCFLGGLIIRNLSICTSNWRCKETLEEYLIKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM++ W IVG+DLIS V+ P+ W + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSQTDNELLEMAQKWKIVGVDLISGVTCDAPYVWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F +++S+T+ V+A+DFGIKHNILRRLASYGC+I VVP+ WPASE L LKPDGVLFSN
Sbjct: 250 EFKG-DQSSETFHVVAFDFGIKHNILRRLASYGCKITVVPANWPASEVLNLKPDGVLFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|413923626|gb|AFW63558.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 481
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/279 (76%), Positives = 245/279 (87%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 105 RPWKLSDARLVLEDGSVWTAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 164
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 165 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEKYLIKRNIMGIYDVDTRA 224
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S +D ELLEM++ W IVG+DLIS V+ P+EW + T +W
Sbjct: 225 ITRRLREDGSLIGVLSTDQSLTDNELLEMAQKWKIVGVDLISGVTCDAPYEWSDKTDSEW 284
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGVLFSN
Sbjct: 285 EFK-RDPSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVLFSN 343
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 344 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 382
>gi|212720831|ref|NP_001132055.1| uncharacterized protein LOC100193467 [Zea mays]
gi|194693312|gb|ACF80740.1| unknown [Zea mays]
Length = 446
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/279 (76%), Positives = 245/279 (87%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWTAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEKYLIKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S +D ELLEM++ W IVG+DLIS V+ P+EW + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSLTDNELLEMAQKWKIVGVDLISGVTCDAPYEWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGVLFSN
Sbjct: 250 EFK-RDPSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVLFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|413923627|gb|AFW63559.1| hypothetical protein ZEAMMB73_621614 [Zea mays]
Length = 488
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/279 (76%), Positives = 245/279 (87%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 105 RPWKLSDARLVLEDGSVWTAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 164
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 165 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEKYLIKRNIMGIYDVDTRA 224
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S +D ELLEM++ W IVG+DLIS V+ P+EW + T +W
Sbjct: 225 ITRRLREDGSLIGVLSTDQSLTDNELLEMAQKWKIVGVDLISGVTCDAPYEWSDKTDSEW 284
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGVLFSN
Sbjct: 285 EFK-RDPSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVLFSN 343
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 344 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 382
>gi|125583409|gb|EAZ24340.1| hypothetical protein OsJ_08093 [Oryza sativa Japonica Group]
Length = 422
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/279 (75%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 19 RPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 78
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES +CFLAGL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 79 PHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIMGIYDVDTRA 138
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM+++W IVG+DLIS V+ P+EW + T +W
Sbjct: 139 ITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYEWSDKTDSEW 198
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +++++ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGV FSN
Sbjct: 199 EFKKGQ-STESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVFFSN 257
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 258 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 296
>gi|41053163|dbj|BAD08105.1| putative carbamoyl-phosphate synthetase small subunit [Oryza sativa
Japonica Group]
Length = 473
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/279 (75%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES +CFLAGL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM+++W IVG+DLIS V+ P+EW + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYEWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +++++ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGV FSN
Sbjct: 250 EFKKGQ-STESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVFFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|115448201|ref|NP_001047880.1| Os02g0708100 [Oryza sativa Japonica Group]
gi|41053164|dbj|BAD08106.1| putative carbamoyl-phosphate synthetase small subunit [Oryza sativa
Japonica Group]
gi|113537411|dbj|BAF09794.1| Os02g0708100 [Oryza sativa Japonica Group]
gi|215717003|dbj|BAG95366.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/279 (75%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES +CFLAGL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM+++W IVG+DLIS V+ P+EW + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYEWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +++++ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGV FSN
Sbjct: 250 EFKKGQ-STESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVFFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|195624346|gb|ACG34003.1| carbamoyl-phosphate synthase small chain [Zea mays]
Length = 446
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/279 (76%), Positives = 245/279 (87%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWTAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEKYLIKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S +D ELLEM++ W IVG+DLIS V+ P+EW + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSLTDNELLEMAQKWKIVGVDLISGVTCDAPYEWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKP+GVLFSN
Sbjct: 250 EFK-RDPSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPNGVLFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|19387248|gb|AAL87160.1|AF480496_14 putative carbamoyl phosphate synthetase small subunit [Oryza sativa
Japonica Group]
Length = 462
Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/279 (75%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES +CFLAGL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM+++W IVG+DLIS V+ P+EW + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYEWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +++++ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKPDGV FSN
Sbjct: 250 EFKKGQ-STESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPDGVFFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|125540839|gb|EAY87234.1| hypothetical protein OsI_08636 [Oryza sativa Indica Group]
Length = 446
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/279 (75%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES +CFLAGL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHIGNTGVNPDDEESNRCFLAGLIIRNLSICTSNWRCTETLEEYLMKRNIMGIYDVDTRA 189
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM+++W IVG+DLIS V+ P+EW + T +W
Sbjct: 190 ITRRLREDGSLIGVLSTDQSRTDDELLEMAKNWKIVGVDLISGVTCDAPYEWSDKTDSEW 249
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F + +++++ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L L+PDGV FSN
Sbjct: 250 EFKKGQ-STESFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLRPDGVFFSN 308
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V+E++GKVPVFGICMGHQL+GQALG
Sbjct: 309 GPGDPAAVPYAVKTVQEIIGKVPVFGICMGHQLIGQALG 347
>gi|413938492|gb|AFW73043.1| hypothetical protein ZEAMMB73_532377 [Zea mays]
Length = 439
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/279 (74%), Positives = 243/279 (87%), Gaps = 8/279 (2%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+WRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 70 RPWKLSDARLVLEDGSVWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 129
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHI DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 130 PHI-------DDEESNQCFLGGLIIRNLSICTSNWRCKETLEEYLTKRNIMGIYDVDTRA 182
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S++D ELLEM++ W IVG+DLIS V+ P+EW++ T +W
Sbjct: 183 ITRRLREDGSLIGVLSTDQSQTDNELLEMAKKWKIVGVDLISGVTCDAPYEWLDKTDSEW 242
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F +++S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKP+GVLFSN
Sbjct: 243 EFK-RDQSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPNGVLFSN 301
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AVPYAV V++++GKVPVFGICMGHQL+GQALG
Sbjct: 302 GPGDPAAVPYAVKTVQDIIGKVPVFGICMGHQLIGQALG 340
>gi|357464521|ref|XP_003602542.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
gi|355491590|gb|AES72793.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
Length = 417
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/279 (75%), Positives = 239/279 (85%), Gaps = 15/279 (5%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARL+LEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 42 RPWKNSDARLLLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 101
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES +CFL+GLVIRSLSI TSNWRC + LG+YL ERN+MGIYDVDTRA
Sbjct: 102 PHIGNTGINFDDEESTECFLSGLVIRSLSISTSNWRCVKDLGDYLTERNVMGIYDVDTRA 161
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P+EWV+ TK +W
Sbjct: 162 ITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPYEWVDRTKEEW 221
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F++ E T+ V+AYDFGIKHNILRRL +TLKL PDGVLFSN
Sbjct: 222 EFSSSEGPRDTFHVVAYDFGIKHNILRRL---------------HPKTLKLNPDGVLFSN 266
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 267 GPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 305
>gi|255640056|gb|ACU20319.1| unknown [Glycine max]
Length = 297
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/252 (80%), Positives = 228/252 (90%), Gaps = 2/252 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ARLVLEDGSIW+AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 46 RPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 105
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+NFDDEES QCFLAGLVIRSLSI TSNWRC + LG+YLAERNIMGIYDVDTRA
Sbjct: 106 PHIGNTGINFDDEESIQCFLAGLVIRSLSISTSNWRCKKDLGDYLAERNIMGIYDVDTRA 165
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLRQDGSLIGVL+T+ S++D+ELL MS+SWDIVG DLIS VS K P EWV+ TK W
Sbjct: 166 ITRRLRQDGSLIGVLTTDNSRTDEELLHMSKSWDIVGKDLISGVSCKTPHEWVDKTKQQW 225
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+F+ + +T+ V+AYDFGIKHNILRRLASYGC+I VVP TWPASETLK+KP+GV+FSN
Sbjct: 226 EFS--KVPGETFHVVAYDFGIKHNILRRLASYGCKITVVPCTWPASETLKMKPNGVIFSN 283
Query: 241 GPGDPSAVPYAV 252
GPGDPSAVPYA+
Sbjct: 284 GPGDPSAVPYAI 295
>gi|168015574|ref|XP_001760325.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688339|gb|EDQ74716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 419
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/281 (71%), Positives = 236/281 (83%), Gaps = 2/281 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ RLVLEDGSIWR KSFGA+GTQVGEVVFNTSLTGYQEILTDPSY+GQFVLMT
Sbjct: 18 RPWKTSDCRLVLEDGSIWRGKSFGATGTQVGEVVFNTSLTGYQEILTDPSYSGQFVLMTQ 77
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG+N DDEES QCF GL+IRSLS SNWR +E L YL +RN+MGI D+DTRA
Sbjct: 78 PHIGNTGINLDDEESGQCFTGGLIIRSLSNIVSNWRSSEELPEYLRKRNVMGISDIDTRA 137
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR++GSLIGVL+T++SK+D EL+EM+++W IVG DLISD S EP+EW + T +W
Sbjct: 138 ITRRLREEGSLIGVLTTDKSKTDDELMEMAKTWKIVGKDLISDASCTEPYEWKDKTDSEW 197
Query: 181 DF--NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+F N + + + V+AYDFG+K NILRRL SYGC+I VVPST+PAS+ L L PDG+LF
Sbjct: 198 EFSPNVPDADDTKFHVVAYDFGVKQNILRRLTSYGCKITVVPSTYPASKVLDLNPDGILF 257
Query: 239 SNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSAVPYAV V++L+GKVPVFGICMGHQLLGQALG
Sbjct: 258 SNGPGDPSAVPYAVKSVQDLVGKVPVFGICMGHQLLGQALG 298
>gi|302809523|ref|XP_002986454.1| hypothetical protein SELMODRAFT_124090 [Selaginella moellendorffii]
gi|300145637|gb|EFJ12311.1| hypothetical protein SELMODRAFT_124090 [Selaginella moellendorffii]
Length = 385
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/283 (69%), Positives = 237/283 (83%), Gaps = 7/283 (2%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW + RLVL+DGS+W KSFGASGTQVGEVVFNT++TGYQEI+TDPSYAGQFV+MT
Sbjct: 5 RPWKTKDTRLVLQDGSVWNGKSFGASGTQVGEVVFNTAMTGYQEIITDPSYAGQFVVMTQ 64
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNF+DEES +C L GL++RSLS SNWR +TL YL +RNIMGI +DTRA
Sbjct: 65 PHIGNTGVNFEDEESSKCHLCGLIVRSLSDRVSNWRATQTLAEYLQKRNIMGISYLDTRA 124
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR DGSL GVLST+ +K+D+ELL ++++W IVG DLIS VS P+EW ++T+ +W
Sbjct: 125 ITRRLRNDGSLNGVLSTDATKTDEELLHIAQNWTIVGKDLISGVSCTRPYEWKDTTRHEW 184
Query: 181 DFNTHERNSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+F+ +++KT ++V+AYDFG+KHNIL+RLASYGC I VVPS WP SE +KLKPDG+
Sbjct: 185 EFS---KDAKTCVPLWQVVAYDFGVKHNILQRLASYGCNITVVPSNWPVSEVMKLKPDGI 241
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
LFSNGPGDPSAVPYAV VKELLG+VPVFGICMGHQLLGQALG
Sbjct: 242 LFSNGPGDPSAVPYAVETVKELLGQVPVFGICMGHQLLGQALG 284
>gi|168002255|ref|XP_001753829.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694805|gb|EDQ81151.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/281 (69%), Positives = 231/281 (82%), Gaps = 2/281 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW ++ RLVLEDGS+W KSFG++GTQVGEVVFNTSLTGYQEILTDPSY+GQFVLMT
Sbjct: 16 RPWKASDCRLVLEDGSVWSGKSFGSTGTQVGEVVFNTSLTGYQEILTDPSYSGQFVLMTQ 75
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DEES +CF L+IR LS SNWR +E L YL +RN+MGI D+DTRA
Sbjct: 76 PHIGNTGVNLGDEESGKCFTGALIIRRLSNIVSNWRSSEDLPEYLKKRNVMGISDIDTRA 135
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR++GSLIGVL+TE SK+D EL+EM+++W I G DLI+D S EP+EW E T +W
Sbjct: 136 ITRRLREEGSLIGVLTTENSKTDDELIEMAKTWKIAGKDLITDASCTEPYEWQEKTDDEW 195
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+F++ + SK + V+AYDFG+K NILRRL SYGC+I VVPST+P S+ L LKPDG+LF
Sbjct: 196 EFSSDIPDLESKKFHVVAYDFGVKQNILRRLTSYGCKITVVPSTYPTSKVLNLKPDGILF 255
Query: 239 SNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSAVPYAV V++L+G VPVFGICMGHQLLGQALG
Sbjct: 256 SNGPGDPSAVPYAVKSVQDLVGIVPVFGICMGHQLLGQALG 296
>gi|302794346|ref|XP_002978937.1| hypothetical protein SELMODRAFT_177367 [Selaginella moellendorffii]
gi|300153255|gb|EFJ19894.1| hypothetical protein SELMODRAFT_177367 [Selaginella moellendorffii]
Length = 446
Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 227/280 (81%), Gaps = 9/280 (3%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW + RLVL+DGS+W KSFGASGTQVGEVVFNT++TGYQEI+TDPSYAGQFV+MT
Sbjct: 74 RPWKTKDTRLVLQDGSVWNGKSFGASGTQVGEVVFNTAMTGYQEIITDPSYAGQFVVMTQ 133
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVNF+DEES +C L GL++RSLS SNWR +TL YL +RNIMGI +DTRA
Sbjct: 134 PHIGNTGVNFEDEESSKCHLCGLIVRSLSDRVSNWRATQTLAEYLQKRNIMGISYLDTRA 193
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR DGSL GVLST+ +K+D+ELL ++++W IVG DLIS VS +T+ +W
Sbjct: 194 ITRRLRNDGSLNGVLSTDATKTDEELLHIAQNWTIVGKDLISGVS--------YTTRHEW 245
Query: 181 DFNTHERNS-KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+F+ + +V+AYDFG+KHNIL+RLASYGC I VVPS WP SE +KLKPDG+LFS
Sbjct: 246 EFSKDAVAACDKLQVVAYDFGVKHNILQRLASYGCNITVVPSNWPVSEVMKLKPDGILFS 305
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDPSAVPYAV VKELLG+VPVFGICMGHQLLGQALG
Sbjct: 306 NGPGDPSAVPYAVETVKELLGQVPVFGICMGHQLLGQALG 345
>gi|229463797|gb|ACQ66324.1| carbamoyl phosphate synthetase A [Populus maximowiczii x Populus
nigra]
Length = 281
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/220 (83%), Positives = 199/220 (90%), Gaps = 1/220 (0%)
Query: 60 NPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTR 119
NPHIGNTGVNFDDEESRQCFLAGLVIRSLSI TSNWRC + LG+YL ERNIMGIYDVDTR
Sbjct: 1 NPHIGNTGVNFDDEESRQCFLAGLVIRSLSISTSNWRCTKALGDYLLERNIMGIYDVDTR 60
Query: 120 AITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPD 179
AITRRLRQDGSL+GVL+TEESK+D+ELLEMSRSWDIVGIDLIS V+ P+EWV+ T P+
Sbjct: 61 AITRRLRQDGSLVGVLTTEESKTDEELLEMSRSWDIVGIDLISGVTCTAPYEWVDKTDPE 120
Query: 180 WDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
WDFN R + Y VIAYDFGIKHNILRRL+SYGC+I VV S+WPASETLK+KPDGVLFS
Sbjct: 121 WDFNCEGR-GEIYHVIAYDFGIKHNILRRLSSYGCKITVVSSSWPASETLKMKPDGVLFS 179
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDPSAVPYAV VKELLGKVPVFGICMGHQLLGQALG
Sbjct: 180 NGPGDPSAVPYAVKTVKELLGKVPVFGICMGHQLLGQALG 219
>gi|229463795|gb|ACQ66323.1| carbamoyl phosphate synthetase A [Populus maximowiczii x Populus
nigra]
Length = 281
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/220 (82%), Positives = 194/220 (88%), Gaps = 1/220 (0%)
Query: 60 NPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTR 119
NPHIGNTGVNFDDEESRQC LAGLVIRSLSI TSNWRC + LG+YL ERNIMGIYDVDTR
Sbjct: 1 NPHIGNTGVNFDDEESRQCXLAGLVIRSLSISTSNWRCTKELGDYLLERNIMGIYDVDTR 60
Query: 120 AITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPD 179
AITRRLRQDGSL+GVL+TEE K+D+ELL+MSRSWDI GIDLIS VS P+EWV+ T +
Sbjct: 61 AITRRLRQDGSLVGVLTTEELKTDEELLKMSRSWDIEGIDLISGVSCTAPYEWVDKTDLE 120
Query: 180 WDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
WDFN R + Y VIAYDFGIKHNILRRLASYGC+I VVPS WPASE LK+KPDGVLFS
Sbjct: 121 WDFNCEGR-GEIYHVIAYDFGIKHNILRRLASYGCKITVVPSNWPASEALKMKPDGVLFS 179
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDPSAVPYAV VKELLGKVPVFGICMGHQLLGQALG
Sbjct: 180 NGPGDPSAVPYAVETVKELLGKVPVFGICMGHQLLGQALG 219
>gi|302840078|ref|XP_002951595.1| hypothetical protein VOLCADRAFT_81499 [Volvox carteri f.
nagariensis]
gi|300263204|gb|EFJ47406.1| hypothetical protein VOLCADRAFT_81499 [Volvox carteri f.
nagariensis]
Length = 449
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/281 (61%), Positives = 218/281 (77%), Gaps = 3/281 (1%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P+ NARLVLEDGS+W A +FGASGT++GEVVFNTSLTGYQEI+TDPSY GQFV T P
Sbjct: 70 PFPKKNARLVLEDGSVWHATAFGASGTEIGEVVFNTSLTGYQEIMTDPSYKGQFVAFTCP 129
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGN G+N++D ES +C L +++R LS SN+R +L Y + N++G+ ++DTRA+
Sbjct: 130 HIGNVGINYEDVESSKCHLGAIIVRDLSCVVSNYRSKMSLDAYCKKENVIGLANLDTRAL 189
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD 181
T+ LR+ G L+GV++T+ SKSD+EL+ M++SW IVG DL+S VS EP+EW + T +W+
Sbjct: 190 TKVLRETGCLVGVVTTDASKSDEELVNMAKSWTIVGKDLLSVVSCTEPYEWGKGTTEEWE 249
Query: 182 FNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
FN + SK Y V+AYDFGIK NILRRLAS+GC+I VVP+T+PASE LK+ PDGV F
Sbjct: 250 FNGRTKLSKQHGPYHVVAYDFGIKTNILRRLASFGCRITVVPATYPASEVLKMNPDGVFF 309
Query: 239 SNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSA PYAV K +LGK PVFGICMGHQ+LGQA G
Sbjct: 310 SNGPGDPSAAPYAVDNAKAILGKKPVFGICMGHQVLGQAFG 350
>gi|255078068|ref|XP_002502614.1| predicted protein [Micromonas sp. RCC299]
gi|226517879|gb|ACO63872.1| predicted protein [Micromonas sp. RCC299]
Length = 429
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 167/281 (59%), Positives = 219/281 (77%), Gaps = 2/281 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
+PW + RLVLEDGS+W +SFGA GT VGEVVFNTSL+GYQEILTDPSYAGQFVL T
Sbjct: 47 KPWKTHDCRLVLEDGSVWSGRSFGAKGTAVGEVVFNTSLSGYQEILTDPSYAGQFVLFTC 106
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
P IGN G+N +D ES + + G+++R LS+ SN+R A +L YL ++N++GI ++DTRA
Sbjct: 107 PEIGNVGINLEDMESTKAHMGGMLVRHLSLNVSNYRSAMSLPEYLEQQNVIGISEIDTRA 166
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR G L GV++T+ +K+D EL+ M++ W IVG D+IS+V+ EP+EW + T +W
Sbjct: 167 ITRRLRDTGCLNGVITTDAAKTDDELIAMAKGWTIVGKDMISEVTCTEPYEWQDPTGAEW 226
Query: 181 DFNTHERNSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+F + S + V+AYDFG+KHNI+RRLASYGC+I VVP++ PA+E + ++PDG+LF
Sbjct: 227 EFAAEAKASTKGSLHVVAYDFGVKHNIMRRLASYGCRITVVPASMPAAEVMAMEPDGILF 286
Query: 239 SNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSAVPYAV K +LG+VPVFGICMGHQ+LGQA G
Sbjct: 287 SNGPGDPSAVPYAVENAKAILGEVPVFGICMGHQVLGQAFG 327
>gi|145355504|ref|XP_001422001.1| Carbamoyl-phosphate synthase S chain [Ostreococcus lucimarinus
CCE9901]
gi|144582240|gb|ABP00295.1| Carbamoyl-phosphate synthase S chain [Ostreococcus lucimarinus
CCE9901]
Length = 415
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 168/280 (60%), Positives = 222/280 (79%), Gaps = 2/280 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
+PW + RLVLEDGS+W +SFGA TQVGEVVFNTSL+GYQEILTDPSYAGQFVL T
Sbjct: 39 KPWEERDCRLVLEDGSVWNGRSFGAKATQVGEVVFNTSLSGYQEILTDPSYAGQFVLFTC 98
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGN G+N D ES+Q + +++R+LS+ SN+R + LG YL E+ ++GI D+DTR
Sbjct: 99 PHIGNVGINEGDMESKQVHMGAMLVRNLSLNVSNYRSVKDLGTYLEEQGVIGITDIDTRE 158
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+ G L GVL+T+ S SD EL+ +++++IVG DLIS+V+ KEP+EW E+T +W
Sbjct: 159 ITRRLRETGCLNGVLTTDASLSDAELVAKAKAYNIVGKDLISEVTCKEPYEWKETTA-EW 217
Query: 181 DF-NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+F N + N ++ V+ YDFG+KHNILRRLAS+GC++ +VP+++PA + + + PDG+LFS
Sbjct: 218 EFSNEAKANKDSFNVVVYDFGVKHNILRRLASFGCKLTIVPASYPADKVMAMNPDGILFS 277
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDPSAVPYAV K++LGK+PVFGICMGHQ+LGQA G
Sbjct: 278 NGPGDPSAVPYAVENAKQILGKLPVFGICMGHQVLGQAFG 317
>gi|384245190|gb|EIE18685.1| carbamoyl-phosphate synthase S chain [Coccomyxa subellipsoidea
C-169]
Length = 425
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 166/279 (59%), Positives = 218/279 (78%), Gaps = 1/279 (0%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
PW +ARLVLEDGS+W ++FG GT + EVVFNTSLTGYQEILTDPSY GQFV+ T+P
Sbjct: 39 PWAKKDARLVLEDGSVWEGRAFGTQGTALAEVVFNTSLTGYQEILTDPSYKGQFVVFTHP 98
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGN G+NF D ES +C L G++IR L+ SN+R +TL YL E+ ++GI DVDTRAI
Sbjct: 99 HIGNVGINFGDMESEKCHLGGIIIRDLAASVSNYRSTKTLDAYLKEQGVLGIADVDTRAI 158
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD 181
TRRLR G+L GV++T+ S +L++ ++SW I+G DLIS+V+ EP+EW ++T+ +W+
Sbjct: 159 TRRLRDTGALNGVITTDLSTPVDDLVQQTKSWSILGKDLISEVTCSEPYEWKDTTEHEWE 218
Query: 182 FNTH-ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
FN + + + V+AYDFGIKHNILRRLAS+GC++ VVP+ +PAS+ L++ PDG+ SN
Sbjct: 219 FNPAVQEKGELFHVVAYDFGIKHNILRRLASFGCKLTVVPADYPASKVLEMNPDGIFLSN 278
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDPSAVPYAV V++++GK PVFGICMGHQLLGQA G
Sbjct: 279 GPGDPSAVPYAVENVRQVIGKKPVFGICMGHQLLGQAFG 317
>gi|413923625|gb|AFW63557.1| hypothetical protein ZEAMMB73_621614, partial [Zea mays]
Length = 337
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/229 (75%), Positives = 198/229 (86%), Gaps = 1/229 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 105 RPWKLSDARLVLEDGSVWTAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 164
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 165 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEKYLIKRNIMGIYDVDTRA 224
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
ITRRLR+DGSLIGVLST++S +D ELLEM++ W IVG+DLIS V+ P+EW + T +W
Sbjct: 225 ITRRLREDGSLIGVLSTDQSLTDNELLEMAQKWKIVGVDLISGVTCDAPYEWSDKTDSEW 284
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETL 229
+F + +S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L
Sbjct: 285 EFK-RDPSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEAL 332
>gi|159466324|ref|XP_001691359.1| carbamoyl phosphate synthase, small subunit [Chlamydomonas
reinhardtii]
gi|158279331|gb|EDP05092.1| carbamoyl phosphate synthase, small subunit [Chlamydomonas
reinhardtii]
Length = 461
Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 166/281 (59%), Positives = 215/281 (76%), Gaps = 3/281 (1%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P+ NARLVLEDGS+W A +FGA+GT++GEVVFNTSL+GYQEI+TDPSY GQFV T P
Sbjct: 77 PFPKRNARLVLEDGSVWHATAFGATGTEIGEVVFNTSLSGYQEIMTDPSYKGQFVAFTCP 136
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGN G+N +D ES +C L +++R LS SN+R +L Y + N++G+ ++DTRA+
Sbjct: 137 HIGNVGINLEDMESTKCHLGAIIVRDLSCVVSNYRSRMSLDEYCKKENVIGLANLDTRAL 196
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD 181
T+ LR+ G L+GV++T+ SK+D EL+ M++ W IVG DL+S VS EP+EW + T +W+
Sbjct: 197 TKVLRETGCLVGVVTTDASKTDAELVTMAKGWTIVGKDLLSVVSCTEPYEWGKGTTDEWE 256
Query: 182 FNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
FN + +K + V+AYDFGIK NILRRLAS+GC+I VVP+T+PASE LK+ PDGV F
Sbjct: 257 FNHRAKLNKQHGPFHVVAYDFGIKTNILRRLASFGCRITVVPATYPASEVLKMNPDGVFF 316
Query: 239 SNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSA PYAV K +LGK PVFGICMGHQ+LGQA G
Sbjct: 317 SNGPGDPSAAPYAVDNAKAILGKKPVFGICMGHQVLGQAFG 357
>gi|412986146|emb|CCO17346.1| carbamoyl-phosphate synthase, small subunit [Bathycoccus prasinos]
Length = 444
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 166/281 (59%), Positives = 219/281 (77%), Gaps = 2/281 (0%)
Query: 1 RPWNVAN-ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMT 59
+PW++ +LVLEDGS+W+ K+FGA GT+VGEVVFNTSL+GYQEILTDPSYAGQFVL T
Sbjct: 60 KPWDIQKPCKLVLEDGSVWQGKAFGADGTKVGEVVFNTSLSGYQEILTDPSYAGQFVLFT 119
Query: 60 NPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTR 119
PHIGN G+N D ES + + ++R ++ SN+R +TL +YL E+ ++GI D+DTR
Sbjct: 120 CPHIGNVGINPLDMESTKVHMGATLVRHEALNVSNYRSTQTLDSYLKEQGVIGISDIDTR 179
Query: 120 AITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPD 179
AIT RLR+ GSL GV++T+ S SD ELL+MS+ +DIVG DLI +V KEP++WV+ T +
Sbjct: 180 AITVRLREKGSLNGVVTTDMSISDDELLKMSKGYDIVGKDLIGEVCVKEPYKWVDPTASE 239
Query: 180 WDFNTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
W+F +++K + V+ +DFGIK+NI+RRLAS+GC + VVP+ + A + +KL PDG+LF
Sbjct: 240 WEFAEKAKSNKDKFNVVCFDFGIKNNIMRRLASFGCDLTVVPANYSAEDVMKLNPDGILF 299
Query: 239 SNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSA PYAV K+LLGKVPVFGICMGHQ+LGQA G
Sbjct: 300 SNGPGDPSAAPYAVENCKKLLGKVPVFGICMGHQVLGQAFG 340
>gi|194705950|gb|ACF87059.1| unknown [Zea mays]
gi|413938494|gb|AFW73045.1| hypothetical protein ZEAMMB73_532377 [Zea mays]
Length = 320
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/222 (72%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 58 MTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVD 117
MTNPHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVD
Sbjct: 1 MTNPHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEEYLTKRNIMGIYDVD 60
Query: 118 TRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTK 177
TRAITRRLR+DGSLIGVLST++S++D ELLEM++ W IVG+DLIS V+ P+EW++ T
Sbjct: 61 TRAITRRLREDGSLIGVLSTDQSQTDNELLEMAKKWKIVGVDLISGVTCDAPYEWLDKTD 120
Query: 178 PDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+W+F +++S+T+ V+AYDFGIKHNILRRL SYGC+I VVP+ WPASE L LKP+GVL
Sbjct: 121 SEWEFK-RDQSSETFHVVAYDFGIKHNILRRLTSYGCKITVVPANWPASEVLNLKPNGVL 179
Query: 238 FSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
FSNGPGDP+AVPYAV V++++GKVPVFGICMGHQL+GQALG
Sbjct: 180 FSNGPGDPAAVPYAVKTVQDIIGKVPVFGICMGHQLIGQALG 221
>gi|307110858|gb|EFN59093.1| hypothetical protein CHLNCDRAFT_18988 [Chlorella variabilis]
Length = 449
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/269 (58%), Positives = 197/269 (73%), Gaps = 8/269 (2%)
Query: 13 EDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDD 72
EDGS+W K+FG +GT VGEVVFNTSLTGYQEILTDPSY GQFV+ T PHIGN D
Sbjct: 61 EDGSVWHGKAFGYTGTTVGEVVFNTSLTGYQEILTDPSYKGQFVVFTYPHIGN------D 114
Query: 73 EESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLI 132
ES + L G+++R LSI SN+R TL YL + +MGI VDTRAITRRLR DG L
Sbjct: 115 MESSKAHLGGVIVRDLSIKVSNYRSNITLDEYLKQHKVMGIAGVDTRAITRRLRVDGCLN 174
Query: 133 GVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNS--K 190
GV+ T+ S SD++L+ +++W IVG DLI +V+ EP+EW + T +W+F + + K
Sbjct: 175 GVICTDASISDEDLVAQTKAWTIVGKDLIKEVTCSEPYEWQDPTGEEWEFAPEAKAAGGK 234
Query: 191 TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPY 250
+V+AYD+GIK NILRRL S+GC + VVP+ +PA + L + PDGV FSNGPGDPSAVPY
Sbjct: 235 KLKVVAYDYGIKLNILRRLTSFGCSVTVVPADYPADKVLAMDPDGVFFSNGPGDPSAVPY 294
Query: 251 AVAIVKELLGKVPVFGICMGHQLLGQALG 279
AV K++LGK PVFGICMGHQ+LGQA G
Sbjct: 295 AVENAKQILGKKPVFGICMGHQVLGQAFG 323
>gi|303289795|ref|XP_003064185.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454501|gb|EEH51807.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 340
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/243 (60%), Positives = 187/243 (76%), Gaps = 2/243 (0%)
Query: 39 LTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCA 98
++GYQEILTDPSYAGQFVL T P IGN G+N +D ES + + G+++R LS+ SN+R +
Sbjct: 1 MSGYQEILTDPSYAGQFVLFTCPEIGNVGINVEDMESTKAHMGGMLVRHLSLNVSNYRSS 60
Query: 99 ETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGI 158
++L YL ++N++GI DVDTRAITRRLR G L GV++TE K+D+EL+ M+R W IVG
Sbjct: 61 QSLPEYLEQQNVIGISDVDTRAITRRLRDTGCLNGVITTESDKTDEELVAMARDWTIVGK 120
Query: 159 DLISDVSGKEPFEWVEST--KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQI 216
D+IS VS EP+EW + T + +W + V+AYDFG+KHNI+RRLA++GC+I
Sbjct: 121 DMISTVSCSEPYEWTDPTGEEWEWAAAAKASKKGSLHVVAYDFGVKHNIMRRLAAFGCRI 180
Query: 217 IVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQ 276
VVP+T PA+E L LKPDGVLFSNGPGDPSAVPYAV KE+LGK+PVFGICMGHQ+LGQ
Sbjct: 181 TVVPATMPAAEVLALKPDGVLFSNGPGDPSAVPYAVDNAKEILGKLPVFGICMGHQVLGQ 240
Query: 277 ALG 279
A G
Sbjct: 241 AFG 243
>gi|156743298|ref|YP_001433427.1| carbamoyl-phosphate synthase small subunit [Roseiflexus
castenholzii DSM 13941]
gi|156234626|gb|ABU59409.1| carbamoyl-phosphate synthase, small subunit [Roseiflexus
castenholzii DSM 13941]
Length = 386
Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 193/274 (70%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG+IW + GA G + GEVVFNTS+TGYQE+LTDPSY GQ V+MT PHIGNTG
Sbjct: 7 AMLALEDGTIWHGYALGAIGERTGEVVFNTSMTGYQEVLTDPSYYGQIVVMTAPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEESR ++AG V+R+ S SNWR A++L YLAE I+ + VDTRA+ R +R
Sbjct: 67 VNREDEESRHPWVAGFVVRAASPYVSNWRAAQSLHEYLAEHGIVAMTGVDTRALVRHIRT 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW--DFNTH 185
G++ V+S+E + D+ + + + G+DL+ V+ EP+ WVE +W
Sbjct: 127 QGAMRAVISSENPEPDRLIAAARAAPSMNGLDLVPYVTCAEPYHWVEGNPGEWGPGETPA 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+R T+ V+AYDFGIK NILR LA +GC++ VVP+T PA++ L L+PDGV SNGPGDP
Sbjct: 187 QRGESTFHVVAYDFGIKRNILRLLAEHGCRVTVVPATMPAADVLALEPDGVFLSNGPGDP 246
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+AV Y V V++LLGK PVFGIC+GHQ+LG ALG
Sbjct: 247 AAVTYGVQAVRDLLGKTPVFGICLGHQILGLALG 280
>gi|148658144|ref|YP_001278349.1| carbamoyl-phosphate synthase small subunit [Roseiflexus sp. RS-1]
gi|148570254|gb|ABQ92399.1| carbamoyl-phosphate synthase small subunit [Roseiflexus sp. RS-1]
Length = 386
Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/274 (52%), Positives = 194/274 (70%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG+IW + GA G + GEVVFNTS+TGYQE+LTDPSY GQ V+MT PHIGNTG
Sbjct: 7 ALLALEDGTIWHGYALGAIGERAGEVVFNTSMTGYQEVLTDPSYYGQIVVMTAPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEESR ++AG V+R+ S SNWR A++L YLA+ I+ + VDTRA+ R +R
Sbjct: 67 VNREDEESRHPWVAGFVVRAASPYVSNWRAAQSLHEYLADHGIVAMTGVDTRALVRHIRT 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF--NTH 185
G++ V+S+++ + D+ + + + G+DL+ V+ EP+ WVE +W
Sbjct: 127 QGAMRAVISSQDPEPDRLIAAARAAPSMNGLDLVPYVTCAEPYHWVEGNPGEWGRGETPA 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+R T+ V+AYDFGIK NILR LA +GC++ VVP+T PA++ L L+PDGV SNGPGDP
Sbjct: 187 QRGEPTFHVVAYDFGIKRNILRLLAEHGCRVTVVPATTPAADVLALEPDGVFLSNGPGDP 246
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+AV Y V V++LLGK PVFGIC+GHQ+LG ALG
Sbjct: 247 AAVTYGVQAVRDLLGKTPVFGICLGHQILGLALG 280
>gi|308813157|ref|XP_003083885.1| putative carbamoyl phosphate synthase small subunit (ISS)
[Ostreococcus tauri]
gi|116055767|emb|CAL57852.1| putative carbamoyl phosphate synthase small subunit (ISS)
[Ostreococcus tauri]
Length = 771
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/239 (58%), Positives = 187/239 (78%), Gaps = 2/239 (0%)
Query: 42 YQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETL 101
YQEILTDPSYAGQFVL T PHIGN G+N D ES + + +++R+LS+ SN+R + L
Sbjct: 4 YQEILTDPSYAGQFVLFTCPHIGNVGINEGDMESSKVHMGAMIVRNLSLNVSNYRSVKDL 63
Query: 102 GNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLI 161
YL E+ +MGI D+DTR ITRRLR+ G L G LS ++SKSD ELL+M++ ++IVG DLI
Sbjct: 64 STYLEEQGVMGIADIDTREITRRLRETGCLNGCLSNDDSKSDAELLDMAKGYNIVGKDLI 123
Query: 162 SDVSGKEPFEWVESTKPDWDFNTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVP 220
S+V+ KEP+EW ++T +W+F+ + SK + V+ YDFG+KHNILRRLAS+GC++ VVP
Sbjct: 124 SEVTCKEPYEWKDTTG-EWEFSDKAKASKDQFNVVVYDFGVKHNILRRLASFGCKLTVVP 182
Query: 221 STWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+++PA + + + PDGV+FSNGPGDPSAVPYAV K +LG++PVFGICMGHQ+LGQA G
Sbjct: 183 ASYPADKVMAMNPDGVMFSNGPGDPSAVPYAVENAKNILGQLPVFGICMGHQVLGQAFG 241
>gi|383762630|ref|YP_005441612.1| carbamoyl-phosphate synthase small subunit [Caldilinea aerophila
DSM 14535 = NBRC 104270]
gi|381382898|dbj|BAL99714.1| carbamoyl-phosphate synthase small chain [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 382
Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/283 (52%), Positives = 195/283 (68%), Gaps = 13/283 (4%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+I+ ++FGA+ T VGEVVFNTSLTGYQEI+TDPSY GQ V MT H+GNTGVN
Sbjct: 1 MVLEDGTIYEGEAFGAAKTVVGEVVFNTSLTGYQEIITDPSYRGQMVCMTLTHVGNTGVN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D ES Q + ++R +S SNWR TL YLA I GI +VDTRA+TRR+R G
Sbjct: 61 AEDVESDQPQVTAFIVREVSPVVSNWRANATLHEYLARHGIPGISEVDTRALTRRIRDKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHERN 188
L L T+ S S +ELLE++R+W+ + G DL+ +V+ EP+ WV+ T+ +W RN
Sbjct: 121 VLHAALCTDGSHSAEELLELARAWEGLDGRDLVQEVTCAEPYNWVDGTRIEWTPVPAGRN 180
Query: 189 SKTYR-----------VIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+ V+AYDFG+K NILRRL S+G ++ VVP++ PASE L ++PDG+
Sbjct: 181 LGSISSAAVTDESKPLVVAYDFGVKQNILRRLTSHGLRVTVVPASTPASEVLAMQPDGIF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP+ VPYA A V+ELL +P FGIC+GHQ++G ALG
Sbjct: 241 LSNGPGDPAGVPYAAAAVRELLDTGIPTFGICLGHQIIGLALG 283
>gi|326501864|dbj|BAK06424.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 254
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 136/192 (70%), Positives = 165/192 (85%), Gaps = 1/192 (0%)
Query: 88 LSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTEESKSDQELL 147
LS TSNWRC ETL YL +RNIMGIYDVDTRAITRRLR+DGSLIGVLST++S D ELL
Sbjct: 14 LSSSTSNWRCTETLDEYLRKRNIMGIYDVDTRAITRRLREDGSLIGVLSTDQSLKDAELL 73
Query: 148 EMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNSKTYRVIAYDFGIKHNILR 207
+M+++W IVG+DLISDVS P+EW++ T W+FN ++ +S+T+ V+ YDFG+KHNILR
Sbjct: 74 QMAKNWKIVGVDLISDVSCDAPYEWLDKTGSGWEFNDNQ-SSETFHVVVYDFGVKHNILR 132
Query: 208 RLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELLGKVPVFGI 267
RLASYGC+I VVP++WPAS+ L LKPDGVLFSNGPGDP+AVPYAV V+E++GKVPVFGI
Sbjct: 133 RLASYGCKITVVPASWPASDVLNLKPDGVLFSNGPGDPAAVPYAVKTVQEIVGKVPVFGI 192
Query: 268 CMGHQLLGQALG 279
CMG QL+GQALG
Sbjct: 193 CMGRQLIGQALG 204
>gi|307150689|ref|YP_003886073.1| carbamoyl-phosphate synthase small subunit [Cyanothece sp. PCC
7822]
gi|306980917|gb|ADN12798.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
7822]
Length = 380
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/277 (53%), Positives = 194/277 (70%), Gaps = 5/277 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA LVL DG+++R SFGA T +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNT
Sbjct: 8 NALLVLADGTVFRGWSFGAKVTALGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G++ R+++ SNWR ++L +YL E NI GIY +DTRA+TR+LR
Sbjct: 68 GVNREDEESERPQIKGVICRNITYRPSNWRSTQSLPDYLIEHNIPGIYGIDTRALTRKLR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN-- 183
GS+ G S+ + Q+LL + +S + G++L+ DV+ +E +EW ++T P W+FN
Sbjct: 128 SVGSMNGAFSS-DILDPQDLLRLIQSAPSMAGLNLVKDVTTREVYEWSDTTDPHWEFNPT 186
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ N + V+A DFGIK NILRRLASYGC++IVVP+ P E LK PDG+ SNGPG
Sbjct: 187 IEKTNGQALTVVAIDFGIKRNILRRLASYGCRVIVVPANTPPEEILKHNPDGIFLSNGPG 246
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DPSAV +A K LL K P FGICMGHQ+LG +LG
Sbjct: 247 DPSAVKEGIATTKALLEAKKPTFGICMGHQILGLSLG 283
>gi|428769365|ref|YP_007161155.1| carbamoyl-phosphate synthase small subunit [Cyanobacterium aponinum
PCC 10605]
gi|428683644|gb|AFZ53111.1| carbamoyl-phosphate synthase small subunit [Cyanobacterium aponinum
PCC 10605]
Length = 379
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 190/275 (69%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ ++ S GA+GT GEVVFNT +TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTTYQGYSCGATGTTFGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D+ES Q + G++ R++ SNWR ++L +YL + NI+ IY +DTR +TRRLR
Sbjct: 69 INPEDDESHQPHIKGVIARNICDRPSNWRSTQSLPDYLKQNNIIAIYGIDTRDLTRRLRI 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE +Q L+++ + G++L+ +V+ KE +EW EST +W+F+
Sbjct: 129 SGAMNGAISTETLDPEQLLIQLRTVPSMAGLNLVKEVTTKEVYEWHESTNSEWEFSPKAS 188
Query: 188 --NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + Y V+A DFGIK NILRRLASYGC++IVVP+ P E LK PDG+ SNGPGDP
Sbjct: 189 LADKEKYTVVAIDFGIKRNILRRLASYGCKVIVVPANTPPEEILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV +A K LL K P FGICMGHQ+LG +LG
Sbjct: 249 SAVAEGIATAKALLEAKKPTFGICMGHQILGLSLG 283
>gi|67921610|ref|ZP_00515128.1| Carbamoyl-phosphate synthase, small subunit [Crocosphaera watsonii
WH 8501]
gi|67856722|gb|EAM51963.1| Carbamoyl-phosphate synthase, small subunit [Crocosphaera watsonii
WH 8501]
Length = 383
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 193/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 11 ALLVLADGTTFEGLSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 70
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES + + G++ R+++ SNWR E+L +YL NI+GIY +DTRA+TR++R
Sbjct: 71 VNPDDEESEKPQVKGVIARNITYRPSNWRSTESLPDYLIRHNIIGIYGIDTRALTRKIRS 130
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G++STE + L ++ + + G++L+ +V+ +E +EW T W+FNT+
Sbjct: 131 VGAINGIISTETLDKGELLRQVQSAPSMAGLNLVKEVTTREIYEWSTPTDSHWNFNTNNG 190
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + + V+A DFG+K NILRRLASYGC+IIVVP+ P + LK PDG+ SNGPGDP
Sbjct: 191 ETSQEGLTVVAIDFGVKRNILRRLASYGCKIIVVPADTPPEDILKYNPDGIFLSNGPGDP 250
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SAV V+ VK L+ GK P FGICMGHQ+LG +LG
Sbjct: 251 SAVTEGVSTVKALIEQGK-PTFGICMGHQILGLSLG 285
>gi|416385273|ref|ZP_11684752.1| Carbamoyl-phosphate synthase small chain [Crocosphaera watsonii WH
0003]
gi|357264911|gb|EHJ13738.1| Carbamoyl-phosphate synthase small chain [Crocosphaera watsonii WH
0003]
Length = 383
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 193/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 11 ALLVLADGTTFEGLSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 70
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES + + G++ R+++ SNWR E+L +YL NI+GIY +DTRA+TR++R
Sbjct: 71 VNPDDEESEKPQVKGVIARNITYRPSNWRSTESLPDYLIRHNIVGIYGIDTRALTRKIRS 130
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G++STE + L ++ + + G++L+ +V+ +E +EW T W+FNT+
Sbjct: 131 VGAINGIISTETLDKGELLRQVQSAPSMAGLNLVKEVTTREIYEWSTPTDSHWNFNTNNG 190
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + + V+A DFG+K NILRRLASYGC+IIVVP+ P + LK PDG+ SNGPGDP
Sbjct: 191 ETSQEGLTVVAIDFGVKRNILRRLASYGCKIIVVPADTPPEDILKYNPDGIFLSNGPGDP 250
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SAV V+ VK L+ GK P FGICMGHQ+LG +LG
Sbjct: 251 SAVTEGVSTVKALIEQGK-PTFGICMGHQILGLSLG 285
>gi|218440136|ref|YP_002378465.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. PCC
7424]
gi|218172864|gb|ACK71597.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
7424]
Length = 379
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 189/276 (68%), Gaps = 3/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA LVL DG+++R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNT
Sbjct: 8 NALLVLADGTVFRGWSFGATGTSIGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G++ R+++ SNWR ++L +YL E NI GIY +DTRA+TR+LR
Sbjct: 68 GVNPEDEESERPQIKGVICRNITHRPSNWRSTQSLPDYLVEHNIPGIYGIDTRALTRKLR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--T 184
GS+ G S+E L + + + G++L+ DV+ ++ +EW T P W+F
Sbjct: 128 SVGSMNGGFSSEILDPQDLLRAVQDAPSMAGLNLVKDVTTRQVYEWSTPTDPHWEFCPVM 187
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+E N + V+A DFGIK NILRRLASYGC++IVVP+ P E LK PDG+ SNGPGD
Sbjct: 188 NESNGQPLTVVALDFGIKRNILRRLASYGCRVIVVPANTPPEEILKYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PSAV + K LL + P FGICMGHQ+LG +LG
Sbjct: 248 PSAVKEGIETTKALLQAQKPTFGICMGHQILGLSLG 283
>gi|113475946|ref|YP_722007.1| carbamoyl phosphate synthase small subunit [Trichodesmium
erythraeum IMS101]
gi|110166994|gb|ABG51534.1| carbamoyl-phosphate synthase small subunit [Trichodesmium
erythraeum IMS101]
Length = 384
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/275 (52%), Positives = 185/275 (67%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 8 ALLVLADGTSYCGLSFGAPGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L YL E I GIY VDTRA+TR++R
Sbjct: 68 VNSEDEESNKPQIQGAIARNICPRPSNWRSTKSLPEYLQEHKIQGIYGVDTRALTRKIRT 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +STE + L ++ + + G++L+ V+ KE ++W E T PDW+FN
Sbjct: 128 VGAMNGAISTEILNPTELLEQVQFAPSMAGLNLVQKVTTKETYQWSEPTNPDWEFNLSVS 187
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + V+A DFG+K NILRRLASYGCQ+IVVP+ P E LK PDG+ SNGPGDP
Sbjct: 188 GNTGEKFTVVAIDFGVKKNILRRLASYGCQVIVVPADTPPEEILKHNPDGIFLSNGPGDP 247
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + KELL PVFGICMGHQ+LG ALG
Sbjct: 248 SAVREGIETTKELLKSSKPVFGICMGHQVLGLALG 282
>gi|354564970|ref|ZP_08984146.1| carbamoyl-phosphate synthase, small subunit [Fischerella sp.
JSC-11]
gi|353550096|gb|EHC19535.1| carbamoyl-phosphate synthase, small subunit [Fischerella sp.
JSC-11]
Length = 392
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/276 (51%), Positives = 195/276 (70%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTTYRGWSFGATGTAIGEVVFNTGMTGYQEVLTDPSYCGQIVVFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWRC+++L +YL + I GIY +DTRA+TR++R
Sbjct: 69 VNPEDEESARPQVRGAIARNICTRPSNWRCSQSLPDYLKQHQIPGIYGIDTRALTRKIRI 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIV-GIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +ST E + ELLE + ++ G++L+ +V+ + +EW E+T P W+FN
Sbjct: 129 YGAMNGGIST-EILDEAELLERVLAAPVMSGLNLVREVTTQTAYEWSETTDPAWEFNPQA 187
Query: 187 R--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + +T V+A DFGIK NILRRLASYGC++IVVP+ P E LK PDG+ SNGPGD
Sbjct: 188 KANSDETLTVVALDFGIKRNILRRLASYGCRVIVVPAHTPKEEILKYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P+AV + K LL + P+FGICMGHQ+LG ALG
Sbjct: 248 PAAVTEGIETAKALLSAQKPMFGICMGHQILGHALG 283
>gi|218245264|ref|YP_002370635.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. PCC
8801]
gi|257058297|ref|YP_003136185.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. PCC
8802]
gi|218165742|gb|ACK64479.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
8801]
gi|256588463|gb|ACU99349.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
8802]
Length = 380
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 191/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L+L DG+ + SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLMLADGTSFEGLSFGAKGTTLGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES + + G++ R+++ SNWR E+L +YL N++GIY +DTRA+TR++R
Sbjct: 69 VNPDDEESSRPQVKGVIARNITYRPSNWRSTESLPDYLLRHNVIGIYGLDTRALTRKIRA 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE + + L ++ + + G++L+ +V+ KE +EW T W+FN +
Sbjct: 129 VGAINGAISTEILEPTELLRQVQLTPSMAGLNLVKEVTTKEVYEWFTPTDSQWEFNPKNQ 188
Query: 188 --NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ T +V+A DFG+K NILRRLASYGC +IVVP+ PA E LK PDG+ SNGPGDP
Sbjct: 189 TMDKGTLKVVAIDFGVKRNILRRLASYGCHVIVVPANTPAEEILKYDPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SAV + KEL+ GK P FGICMGHQ+LG +LG
Sbjct: 249 SAVQEGIETAKELIKAGK-PTFGICMGHQILGLSLG 283
>gi|428210606|ref|YP_007083750.1| carbamoyl-phosphate synthase small subunit [Oscillatoria acuminata
PCC 6304]
gi|427998987|gb|AFY79830.1| carbamoyl-phosphate synthase small subunit [Oscillatoria acuminata
PCC 6304]
Length = 418
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 194/275 (70%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 41 ALLVLADGTSYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 100
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES++ + G + R++ SNWR ++L +YL + NI GIY +DTRA+TR++R
Sbjct: 101 VNPDDEESQRPQVRGAIARNICKRPSNWRSTQSLPDYLTQNNIPGIYGIDTRALTRKIRM 160
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE ++ L ++ + + G++L+ +VS +EW E+T P W+F+ +
Sbjct: 161 VGAMNGGISTEILDPNELLAQVQAAPSMKGLNLVPEVSTSTVYEWTETTDPHWEFSPQAQ 220
Query: 188 --NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
N +T+ V+A DFGIK NILRRL+SYGC++IVVP+ A E LK PDG+ SNGPGDP
Sbjct: 221 GMNGETFTVVALDFGIKRNILRRLSSYGCRVIVVPANTSAEEILKHNPDGIFLSNGPGDP 280
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV V K+LL + P+FGIC+GHQ+LG +LG
Sbjct: 281 AAVLQGVETAKQLLTSEKPMFGICLGHQILGLSLG 315
>gi|414076049|ref|YP_006995367.1| carbamoyl-phosphate synthase small subunit [Anabaena sp. 90]
gi|413969465|gb|AFW93554.1| carbamoyl-phosphate synthase small subunit [Anabaena sp. 90]
Length = 385
Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 193/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGSI+R SFGA+GT +GE+VFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGSIYRGWSFGATGTAIGEIVFNTGMTGYQEVLTDPSYCGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +DEES Q + G + R++ SNWR ++L NYL + I IY +DTRA+TR++R
Sbjct: 69 INSEDEESNQPHVKGAIARNICHKPSNWRSTQSLPNYLQQHQIPAIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G++ G +ST + ELLEM ++ ++ G++L+ DV+ +EW+E+T W+FN+
Sbjct: 129 FGAMNGGIST-AILDEAELLEMVQAAPNMTGLNLVKDVTTPTVYEWLEATTAPWEFNSAA 187
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ +T+ V+A DFG+K NILRRLASYGC++IVVP+ E LK PDG+ SNGPGD
Sbjct: 188 VAKIGETFTVVALDFGVKRNILRRLASYGCRVIVVPADTQPEEILKYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P+AV + + LL + P+FGICMGHQ+LG ALG
Sbjct: 248 PAAVTEGINTTRALLDSQKPIFGICMGHQILGHALG 283
>gi|110833178|ref|YP_692037.1| carbamoyl phosphate synthase small subunit [Alcanivorax borkumensis
SK2]
gi|110646289|emb|CAL15765.1| carbamoyl-phosphate synthase, small subunit [Alcanivorax
borkumensis SK2]
Length = 374
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 144/276 (52%), Positives = 190/276 (68%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R + GA+G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGVAIGATGETVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + + +GLVIR L++ SNWR ++L +YL +RNI+ I D+DTR +TR LR
Sbjct: 65 VTAEDEESSRIWASGLVIRDLAMTVSNWRSEQSLSDYLRDRNIVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+L G + ES + + L ++ + + G+DL VS EP+ W EST WD
Sbjct: 125 KGALNGCILAGESVDEAQALAAAKGFPGLKGMDLAKVVSVAEPYSWTEST---WDLEQGH 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYD+G+K NILR LA GC++ VVP+ PASE L +KPDGV SNGPGD
Sbjct: 182 TEQGETRFHVVAYDYGVKRNILRMLAERGCKLTVVPAQTPASEVLAMKPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA++ ++E++G +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAISAIQEIVGTGLPVFGICLGHQLLALASG 277
>gi|427730278|ref|YP_007076515.1| carbamoyl-phosphate synthase small subunit [Nostoc sp. PCC 7524]
gi|427366197|gb|AFY48918.1| carbamoyl-phosphate synthase, small subunit [Nostoc sp. PCC 7524]
Length = 388
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 193/275 (70%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVVFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L YL + I GIY +DTRA+TR++R
Sbjct: 69 VNPEDEESTRPQVRGAIARNICHQPSNWRSVQSLPEYLKQYQIPGIYGIDTRALTRKIRM 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G +STE + L ++ + ++ G++L+ +V+ + +EW + T P W+FN+
Sbjct: 129 YGAMNGGISTEILDEAELLEQVLAAPNMAGLNLVREVTTPQVYEWSDPTIPAWEFNSEAT 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ ++ V+A DFG+K NILRRLASYGC++IVVP+ PA+E LK PDG+ SNGPGDP
Sbjct: 189 ANHQESLTVVALDFGVKRNILRRLASYGCRVIVVPADTPAAEILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV +A K LL + P+FGICMGHQ+LG ALG
Sbjct: 249 AAVAEGIATAKALLTSEKPIFGICMGHQILGHALG 283
>gi|357477161|ref|XP_003608866.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
gi|355509921|gb|AES91063.1| Carbamoyl-phosphate synthase small chain [Medicago truncatula]
Length = 281
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/169 (78%), Positives = 151/169 (89%)
Query: 111 MGIYDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPF 170
MGIYDVDTRAITRRLR+DGSLIGVLST+ SK+D+ELL+MS+SWDIVGIDLIS VS K P
Sbjct: 1 MGIYDVDTRAITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKSPH 60
Query: 171 EWVESTKPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLK 230
EW++ T+ +W+F++ E T+ V+AYDFGIKHNILRRLASYGC+I VVPSTWPASETLK
Sbjct: 61 EWIDRTREEWEFSSSEGPRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLK 120
Query: 231 LKPDGVLFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
L PDGVLFSNGPGDPSAVPYAV VK ++GKVPVFGICMGHQLLGQALG
Sbjct: 121 LNPDGVLFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALG 169
>gi|425461858|ref|ZP_18841332.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9808]
gi|389825211|emb|CCI25192.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9808]
Length = 382
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 190/274 (69%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 RDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|409991525|ref|ZP_11274779.1| carbamoyl phosphate synthase small subunit [Arthrospira platensis
str. Paraca]
gi|291571379|dbj|BAI93651.1| carbamoyl-phosphate synthase small subunit [Arthrospira platensis
NIES-39]
gi|409937619|gb|EKN79029.1| carbamoyl phosphate synthase small subunit [Arthrospira platensis
str. Paraca]
Length = 384
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 194/279 (69%), Gaps = 7/279 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLIDGTSYRGWSFGAPGTVVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L +YL E NI GIY +DTRA+TR+LR
Sbjct: 69 VNPEDEESNRPQVLGAIARNICSRPSNWRSTQSLPDYLKEHNIPGIYGIDTRALTRKLRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--H 185
G++ G +STE + L + ++ ++ G++L+ +V+ E +EW EST W+F+
Sbjct: 129 VGAMNGGISTEILDPGELLSRVQQAPNMDGLNLVKEVTTPESYEWSESTDTVWEFSPSLE 188
Query: 186 ERNSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ S T Y V+A DFG+K NILRRLASYGC++IVVP++ PA+E LK PDG+ SNG
Sbjct: 189 SKESPTPSPRYTVVAIDFGVKRNILRRLASYGCRVIVVPASTPAAEILKYNPDGIFLSNG 248
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+AV ++ +ELL PVFGICMGHQ+LG +LG
Sbjct: 249 PGDPAAVSEGISTTQELLKSNKPVFGICMGHQILGLSLG 287
>gi|172035818|ref|YP_001802319.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. ATCC
51142]
gi|354555054|ref|ZP_08974357.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. ATCC
51472]
gi|171697272|gb|ACB50253.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. ATCC
51142]
gi|353553208|gb|EHC22601.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. ATCC
51472]
Length = 381
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/276 (51%), Positives = 191/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTSFEGLSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES + + G++ R+++ SNWR E+L +YL I+GIY +DTRA+TR++R
Sbjct: 69 VNPDDEESEKPQVKGVIARNVTYRPSNWRSTESLPDYLIRHKIVGIYGIDTRALTRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G++STE + L ++ + + G++L+ +V+ KE +EW T+ W+F
Sbjct: 129 VGAMNGIISTEILDKSELLRQVQSAPSMAGLNLVKEVTTKEIYEWSTPTEGHWEFKPKNG 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ +S++ V+A DFG+K NILRRLASYGC+IIVVP+ P + LK PDG+ SNGPGDP
Sbjct: 189 DGSSESLTVVAIDFGVKRNILRRLASYGCKIIVVPADTPPEDILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SAV V VK L+ GK P FGICMGHQ+LG +LG
Sbjct: 249 SAVTEGVTTVKALIEQGK-PTFGICMGHQILGLSLG 283
>gi|428227212|ref|YP_007111309.1| carbamoyl-phosphate synthase small subunit [Geitlerinema sp. PCC
7407]
gi|427987113|gb|AFY68257.1| carbamoyl-phosphate synthase small subunit [Geitlerinema sp. PCC
7407]
Length = 386
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 193/280 (68%), Gaps = 3/280 (1%)
Query: 3 WNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPH 62
++ A LVL DG+++ KSFGASGT +GEVVFNT +TGYQE+LTDPSY GQ V T P
Sbjct: 4 FDAQPAILVLADGTVFHGKSFGASGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPE 63
Query: 63 IGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAIT 122
+GNTG+N +DEES + G++ R+++ SNWR ++L NYL + N++ IYD+DTRA+T
Sbjct: 64 LGNTGINPEDEESSGPQIRGVIARNITTRPSNWRATQSLPNYLKQHNVVAIYDIDTRALT 123
Query: 123 RRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF 182
R++R G++ G +ST ++ L ++ + + G++L+ +V+ +EWVE+T +W+F
Sbjct: 124 RKIRSTGAINGGISTTILDPNELLRQVQAAPSMAGLNLVREVTTSNTYEWVEATPSEWEF 183
Query: 183 N--THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + + V+A DFG+K NILRRLASYGC+I VVP+ A + L PDG+ SN
Sbjct: 184 SPTAGASDEAPFNVVALDFGLKRNILRRLASYGCRITVVPADTSAEKILAHNPDGIFLSN 243
Query: 241 GPGDPSAVPYAVAIVKELLGKV-PVFGICMGHQLLGQALG 279
GPGDP+AV +A +ELL P+FGICMGHQ+LG +LG
Sbjct: 244 GPGDPAAVTEGIATARELLKAAKPMFGICMGHQILGLSLG 283
>gi|209523279|ref|ZP_03271835.1| carbamoyl-phosphate synthase, small subunit [Arthrospira maxima
CS-328]
gi|423066541|ref|ZP_17055331.1| carbamoyl-phosphate synthase small subunit [Arthrospira platensis
C1]
gi|209496430|gb|EDZ96729.1| carbamoyl-phosphate synthase, small subunit [Arthrospira maxima
CS-328]
gi|406711849|gb|EKD07047.1| carbamoyl-phosphate synthase small subunit [Arthrospira platensis
C1]
Length = 384
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 196/279 (70%), Gaps = 7/279 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLIDGTSYRGWSFGAPGTVLGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES++ + G + R++ SNWR ++L +YL E NI GIY +DTRA+TR+LR
Sbjct: 69 VNPEDEESQRPQVRGAIARNICTRPSNWRSTQSLPDYLKEHNIPGIYGIDTRALTRKLRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--H 185
G++ G +STE + L + ++ ++ G++L+ +V+ E +EW EST W+F+
Sbjct: 129 VGAMNGGISTEILDPAELLSLVEQAPNMDGLNLVKEVTTPESYEWSESTDTVWEFSPSLE 188
Query: 186 ERNSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++S T Y V+A DFG+K NILRRLASYGC++IVVP++ PA+E LK PDG+ SNG
Sbjct: 189 SKDSPTPPPRYTVVAIDFGVKRNILRRLASYGCRVIVVPASTPAAEILKYNPDGIFLSNG 248
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+AV ++ +ELL PVFGICMGHQ+LG +LG
Sbjct: 249 PGDPAAVSEGISTTQELLKSNKPVFGICMGHQILGLSLG 287
>gi|376001445|ref|ZP_09779315.1| Carbamoyl-phosphate synthase small chain [Arthrospira sp. PCC 8005]
gi|375330274|emb|CCE15068.1| Carbamoyl-phosphate synthase small chain [Arthrospira sp. PCC 8005]
Length = 384
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/279 (51%), Positives = 196/279 (70%), Gaps = 7/279 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLIDGTSYRGWSFGAPGTVLGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES++ + G + R++ SNWR ++L +YL E NI GIY +DTRA+TR+LR
Sbjct: 69 VNPEDEESQRPQVRGAIARNICTRPSNWRSTQSLPDYLKEHNIPGIYGIDTRALTRQLRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--H 185
G++ G +STE + L + ++ ++ G++L+ +V+ E +EW EST W+F+
Sbjct: 129 VGAMNGGISTEILDPAELLSLVQQAPNMDGLNLVKEVTTPESYEWSESTDTVWEFSPSLE 188
Query: 186 ERNSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++S T Y V+A DFG+K NILRRLASYGC++IVVP++ PA+E LK PDG+ SNG
Sbjct: 189 SKDSPTPPPRYTVVAIDFGVKRNILRRLASYGCRVIVVPASTPAAEILKYNPDGIFLSNG 248
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+AV ++ +ELL PVFGICMGHQ+LG +LG
Sbjct: 249 PGDPAAVSEGISTTQELLKSNKPVFGICMGHQILGLSLG 287
>gi|126656809|ref|ZP_01728023.1| carbamoyl-phosphate synthase small subunit [Cyanothece sp. CCY0110]
gi|126622029|gb|EAZ92737.1| carbamoyl-phosphate synthase small subunit [Cyanothece sp. CCY0110]
Length = 381
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 188/276 (68%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTTFEGLSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES + + G++ R+++ SNWR E+L +YL I+GIY +DTRA+TR++R
Sbjct: 69 VNPDDEESEKPQVKGVIARNITYRPSNWRSTESLPDYLIRHKIVGIYGIDTRALTRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G++STE + L ++ + + G++L+ +V+ KE +EW T W+F
Sbjct: 129 VGAINGIISTEVLDKSELLRQVQSAPSMAGLNLVKEVTTKEIYEWSTPTDGHWEFKARNG 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + + V+A DFG+K NILRRLASYGC+IIVVP+ P + LK PDG+ SNGPGDP
Sbjct: 189 DGSPDVFTVVAIDFGVKRNILRRLASYGCKIIVVPADTPPEDILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SAV V VK L+ GK P FGICMGHQ+LG +LG
Sbjct: 249 SAVTEGVTTVKALIEQGK-PTFGICMGHQILGLSLG 283
>gi|392409585|ref|YP_006446192.1| carbamoyl-phosphate synthase small subunit [Desulfomonile tiedjei
DSM 6799]
gi|390622721|gb|AFM23928.1| carbamoyl-phosphate synthase small subunit [Desulfomonile tiedjei
DSM 6799]
Length = 369
Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/273 (52%), Positives = 188/273 (68%), Gaps = 6/273 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R KS GA+G VGEVVFNT++TGYQEILTDPSY GQ V MT PHIGNTG
Sbjct: 3 ATLVLADGTVFRGKSMGATGEIVGEVVFNTAITGYQEILTDPSYRGQIVTMTYPHIGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VNF+D E+ + +LAG VI+ SNWR + L +L + I+GI+ +DTR +TR +R+
Sbjct: 63 VNFEDNEAVEPYLAGFVIKEYCPHPSNWRKNQDLEEFLKKHGIIGIHGIDTRKLTRNIRE 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
G+ G++STE+ + LL+ R + DI G+DL+ +VS KEP++W E T W +N
Sbjct: 123 TGAKKGIISTED-HDEHHLLKRVRDYPDIEGLDLVREVSCKEPYDWDEGT---WQWNAVP 178
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E+ T+RV AYD GIK NILR L G ++ V P+ + E L PDG+ SNGPGDP
Sbjct: 179 EKREGTFRVAAYDSGIKQNILRLLVDAGAKVRVFPAFASSDEVLAYNPDGIFLSNGPGDP 238
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQAL 278
AVPY + V+ L+GK P+FGIC+GHQ+LG AL
Sbjct: 239 EAVPYLIENVRNLIGKKPIFGICLGHQILGLAL 271
>gi|428780654|ref|YP_007172440.1| carbamoyl-phosphate synthase small subunit [Dactylococcopsis salina
PCC 8305]
gi|428694933|gb|AFZ51083.1| carbamoyl-phosphate synthase, small subunit [Dactylococcopsis
salina PCC 8305]
Length = 385
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 191/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R KSFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLEDGTVFRGKSFGAKGTTIGEVVFNTGMTGYQEVLTDPSYRGQMVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES Q ++G++ R+L SN+R +L +YL N++GIY +DTRA+TR LR
Sbjct: 69 VNPDDEESDQPQVSGVIARNLCYSPSNYRSRSSLPDYLNHHNVIGIYGIDTRALTRILRS 128
Query: 128 DGSLIGVLSTEESKSDQELLE-MSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G++ G +ST E ++ELLE + + ++G++L+++V+ KE +EW +ST W+F
Sbjct: 129 SGAMNGAIST-EILGEKELLEKVQTAPKMLGLNLVNEVTTKEVYEWSDSTAETWEFRPVL 187
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + K V+A DFGIK NILRRLASY C++IVVP+ + PDG+ SNGPGD
Sbjct: 188 AQNDPKPLTVVAIDFGIKRNILRRLASYSCRVIVVPANTTPETIYQYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P+ V +A K LL P+FGICMGHQ+LG +LG
Sbjct: 248 PAVVKEGIATTKALLETGTPMFGICMGHQILGLSLG 283
>gi|166365584|ref|YP_001657857.1| carbamoyl phosphate synthase small subunit [Microcystis aeruginosa
NIES-843]
gi|166087957|dbj|BAG02665.1| carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
NIES-843]
Length = 382
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR ++L +YLA+ +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSTQSLPDYLADHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSPWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|427738058|ref|YP_007057602.1| carbamoyl-phosphate synthase small subunit [Rivularia sp. PCC 7116]
gi|427373099|gb|AFY57055.1| carbamoyl-phosphate synthase small subunit [Rivularia sp. PCC 7116]
Length = 385
Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 138/273 (50%), Positives = 188/273 (68%), Gaps = 3/273 (1%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTGVN
Sbjct: 11 LVLADGTSYRGWSFGATGTAIGEVVFNTGMTGYQEVLTDPSYCGQIVVFTYPELGNTGVN 70
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
D ES + + + +++ SNWR ++L +YL E I GIY +DTRA+TR++R G
Sbjct: 71 PLDAESDKPHIKACIAKNICERPSNWRATQSLPDYLKEHQIPGIYGIDTRALTRKIRNVG 130
Query: 130 SLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNS 189
++ G +STE ++ L ++ + + G++L+ +V+ E +EW + T P W+F T S
Sbjct: 131 AMNGGISTEILDPNELLQLVNAAPSMSGLNLVKEVTTSEVYEWSQPTTPAWEFKTDSPTS 190
Query: 190 KT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ + V+A DFG+K NILRRLAS+GC++IVVP+ P E LK PDG+ SNGPGDPSA
Sbjct: 191 SSPEFTVVALDFGVKRNILRRLASHGCRVIVVPADTPTQEILKHNPDGIFLSNGPGDPSA 250
Query: 248 VPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V +A K LL K P+FGICMGHQ+LGQALG
Sbjct: 251 VTEGIATAKALLESKKPMFGICMGHQILGQALG 283
>gi|407960200|dbj|BAM53440.1| carbamoyl phosphate synthase small subunit [Synechocystis sp. PCC
6803]
Length = 389
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 188/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 14 ALLVLADGTPYPGWSFGADGTTVGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 73
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G+V R+++ SNWR ++L +YL E I+GIY +DTRA+TR+LR
Sbjct: 74 VNAEDEESIHPHVKGVVARNITRRPSNWRSTQSLPDYLVEHKIIGIYGIDTRALTRKLRS 133
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +STE + + L + + + G++L+ +V+ E +EW +ST W F
Sbjct: 134 IGAMNGGISTEILEPEALLHHIQAAPSMAGLNLVKEVTTHEVYEWTDSTNDHWQFGPVAE 193
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
++ V+A DFG+K NILRRLASYGC++IVVP++ A+E L+ PDG+ SNGPGDP
Sbjct: 194 QQGQPPLTVVALDFGVKRNILRRLASYGCRVIVVPASTSAAEILQYNPDGIFLSNGPGDP 253
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + KELL K P+FGICMGHQ+LG +LG
Sbjct: 254 SAVEEGIVTTKELLAAKKPMFGICMGHQVLGLSLG 288
>gi|161344749|ref|NP_442883.2| carbamoyl phosphate synthase small subunit [Synechocystis sp. PCC
6803]
gi|383323898|ref|YP_005384752.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803 substr. GT-I]
gi|383327067|ref|YP_005387921.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803 substr. PCC-P]
gi|383492951|ref|YP_005410628.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|384438219|ref|YP_005652944.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
gi|21759020|sp|P74587.2|CARA_SYNY3 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|339275252|dbj|BAK51739.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
gi|359273218|dbj|BAL30737.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803 substr. GT-I]
gi|359276388|dbj|BAL33906.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803 substr. PCC-N]
gi|359279558|dbj|BAL37075.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803 substr. PCC-P]
Length = 384
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 188/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTPYPGWSFGADGTTVGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G+V R+++ SNWR ++L +YL E I+GIY +DTRA+TR+LR
Sbjct: 69 VNAEDEESIHPHVKGVVARNITRRPSNWRSTQSLPDYLVEHKIIGIYGIDTRALTRKLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +STE + + L + + + G++L+ +V+ E +EW +ST W F
Sbjct: 129 IGAMNGGISTEILEPEALLHHIQAAPSMAGLNLVKEVTTHEVYEWTDSTNDHWQFGPVAE 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
++ V+A DFG+K NILRRLASYGC++IVVP++ A+E L+ PDG+ SNGPGDP
Sbjct: 189 QQGQPPLTVVALDFGVKRNILRRLASYGCRVIVVPASTSAAEILQYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + KELL K P+FGICMGHQ+LG +LG
Sbjct: 249 SAVEEGIVTTKELLAAKKPMFGICMGHQVLGLSLG 283
>gi|422303367|ref|ZP_16390718.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9806]
gi|389791638|emb|CCI12537.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9806]
Length = 382
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 190/274 (69%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAEYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|425436462|ref|ZP_18816898.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9432]
gi|389678832|emb|CCH92354.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9432]
Length = 382
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSTWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|390437762|ref|ZP_10226281.1| Carbamoyl-phosphate synthase small chain [Microcystis sp. T1-4]
gi|389838802|emb|CCI30405.1| Carbamoyl-phosphate synthase small chain [Microcystis sp. T1-4]
Length = 382
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNSEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ V+A DFGIK NILRRLASYGC++IVVP+ P + + PDG+ FSNGPGDP+
Sbjct: 189 SEQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAEYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|119511319|ref|ZP_01630433.1| carbamoyl-phosphate synthase small subunit [Nodularia spumigena
CCY9414]
gi|119464025|gb|EAW44948.1| carbamoyl-phosphate synthase small subunit [Nodularia spumigena
CCY9414]
Length = 380
Score = 282 bits (722), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 135/275 (49%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT++GEVVFNT +TGYQE+LTDPSY GQ ++ T P +GNTG
Sbjct: 9 ALLVLADGTTYRGWSFGATGTKIGEVVFNTGMTGYQEVLTDPSYCGQIIIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +DEES + AG + R++ SNWR ++L +YL + I GIY +DTRA+TR++R
Sbjct: 69 INVEDEESDRPLCAGAIARNICHRPSNWRSTQSLPDYLNQHQIPGIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE- 186
G++ G +ST + L ++ + + G++L V+ +EW E+T P W+FN+
Sbjct: 129 LGAMNGGISTSILDEAELLEQVLAAPSMAGLNLARQVTTPTVYEWTEATIPAWEFNSESV 188
Query: 187 -RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+++ V+A DFG+K NILRRLASYGC++IVVP P E LK PDG+ SNGPGDP
Sbjct: 189 VNQEESFTVVALDFGVKRNILRRLASYGCRVIVVPVDTPPEEILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV + K LL + P+FGICMGHQ+LG ALG
Sbjct: 249 AAVTEGITTAKALLESQKPIFGICMGHQILGHALG 283
>gi|443648571|ref|ZP_21130040.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
DIANCHI905]
gi|159029969|emb|CAO90348.1| carA [Microcystis aeruginosa PCC 7806]
gi|443335158|gb|ELS49637.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
DIANCHI905]
Length = 382
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|425443355|ref|ZP_18823575.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9717]
gi|389715371|emb|CCI00251.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9717]
Length = 382
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 190/274 (69%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR ++L +YLA+ +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSTQSLPDYLADHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAEYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|425457652|ref|ZP_18837350.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9807]
gi|389800915|emb|CCI19835.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9807]
Length = 382
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 190/274 (69%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSQGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA+ +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLADHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|434396900|ref|YP_007130904.1| carbamoyl-phosphate synthase small subunit [Stanieria cyanosphaera
PCC 7437]
gi|428267997|gb|AFZ33938.1| carbamoyl-phosphate synthase small subunit [Stanieria cyanosphaera
PCC 7437]
Length = 377
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS + SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGSYYHGLSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G + R+++ SNWR ++L +YL E NI GIY +DTRA+TR+LR
Sbjct: 69 VNPEDEESDYPQVKGAIARNITYRPSNWRSTKSLPDYLTEHNIPGIYSIDTRALTRKLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE ++ L + ++ + G++L+ DV+ K+ +EW EST P W+F+ +
Sbjct: 129 VGAMNGGISTEILDPEKLLRLVEQAPSMAGLNLVKDVTTKQVYEWSESTTPHWEFSPAKT 188
Query: 188 --NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + V+A DFGIK NILRRLASYGC++IVVP+ E L PDGV SNGPGDP
Sbjct: 189 KPDQELLTVVAIDFGIKRNILRRLASYGCRVIVVPANTSPEEILAYNPDGVFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+A + K+LL +P FGICMGHQ+LG +LG
Sbjct: 249 AANLEGIETTKQLLKAGLPTFGICMGHQILGLSLG 283
>gi|451816307|ref|YP_007452759.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
gi|1653784|dbj|BAA18695.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
gi|451782276|gb|AGF53245.1| carbamoyl-phosphate synthetase subunit A [Synechocystis sp. PCC
6803]
Length = 424
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 188/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT VGEVVFNT +TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 49 ALLVLADGTPYPGWSFGADGTTVGEVVFNTGMTGYQEVMTDPSYCGQIVTFTYPELGNTG 108
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G+V R+++ SNWR ++L +YL E I+GIY +DTRA+TR+LR
Sbjct: 109 VNAEDEESIHPHVKGVVARNITRRPSNWRSTQSLPDYLVEHKIIGIYGIDTRALTRKLRS 168
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +STE + + L + + + G++L+ +V+ E +EW +ST W F
Sbjct: 169 IGAMNGGISTEILEPEALLHHIQAAPSMAGLNLVKEVTTHEVYEWTDSTNDHWQFGPVAE 228
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
++ V+A DFG+K NILRRLASYGC++IVVP++ A+E L+ PDG+ SNGPGDP
Sbjct: 229 QQGQPPLTVVALDFGVKRNILRRLASYGCRVIVVPASTSAAEILQYNPDGIFLSNGPGDP 288
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + KELL K P+FGICMGHQ+LG +LG
Sbjct: 289 SAVEEGIVTTKELLAAKKPMFGICMGHQVLGLSLG 323
>gi|443326796|ref|ZP_21055438.1| carbamoyl-phosphate synthase, small subunit [Xenococcus sp. PCC
7305]
gi|442793589|gb|ELS03034.1| carbamoyl-phosphate synthase, small subunit [Xenococcus sp. PCC
7305]
Length = 375
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 190/275 (69%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS + SFGA GT +GEVVFNT +TGYQE+LTDPSY+GQ V T P +GNTG
Sbjct: 9 ALLVLADGSFYHGWSFGAKGTVIGEVVFNTGMTGYQEVLTDPSYSGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G + R+++ SNWR ++L +YL NI GIY +DTR++TR++R
Sbjct: 69 VNPEDEESAHPHVKGAIARNVTYRPSNWRSTQSLPDYLQSNNIPGIYGIDTRSLTRKIRS 128
Query: 128 DGSLIGVLSTE--ESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G++ G +STE + + Q L+ + S + G++L+ DV+ E +EW E+T W+F+
Sbjct: 129 TGAMNGAISTEILDPQRLQSLVLEAPS--MAGLNLVKDVTTSEIYEWSETTAASWEFSP- 185
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ ++ V+A DFGIK NILRRLASYGC++IVVP+T E L PDG+ SNGPGDP
Sbjct: 186 ATGASSFTVVAVDFGIKRNILRRLASYGCKVIVVPATASLEEILAYNPDGIFLSNGPGDP 245
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
+AV VA+ KELL + P FGICMGHQ+LG +LG
Sbjct: 246 AAVTEGVALAKELLKLEKPTFGICMGHQILGLSLG 280
>gi|425471155|ref|ZP_18850015.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9701]
gi|389883015|emb|CCI36578.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9701]
Length = 382
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 190/274 (69%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAEYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|425446613|ref|ZP_18826616.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9443]
gi|389733092|emb|CCI03100.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9443]
Length = 382
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSQGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHQPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|440683151|ref|YP_007157946.1| carbamoyl-phosphate synthase small subunit [Anabaena cylindrica PCC
7122]
gi|428680270|gb|AFZ59036.1| carbamoyl-phosphate synthase small subunit [Anabaena cylindrica PCC
7122]
Length = 385
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 192/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA GT +GEVVFNT +TGYQE+LTDPSY+GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTTYRGWSFGAMGTAIGEVVFNTGMTGYQEVLTDPSYSGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L +YL + + GI+ +DTRA+TR++R
Sbjct: 69 VNLEDEESAKPHVRGAIARNICHKPSNWRSTQSLPDYLKQHQVPGIFGIDTRALTRKIRM 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +ST + ELLE+ ++ ++ G++L+ +V+ +EW E+T W+FN
Sbjct: 129 FGAMNGGIST-SILDEAELLELVQAAPNMAGLNLVQEVTTPTVYEWSEATTAAWEFNPEN 187
Query: 187 --RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ S+T+ V+A DFG+K NILRRLASYGC++IVVP+ E LK PDG+ SNGPGD
Sbjct: 188 VAKISETFTVVALDFGVKRNILRRLASYGCRVIVVPANTQPEEILKYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P+AV + K LL + P+FGICMGHQ+LG ALG
Sbjct: 248 PAAVTEGITTAKALLESQKPMFGICMGHQILGHALG 283
>gi|254427806|ref|ZP_05041513.1| carbamoyl-phosphate synthase, small subunit [Alcanivorax sp. DG881]
gi|196193975|gb|EDX88934.1| carbamoyl-phosphate synthase, small subunit [Alcanivorax sp. DG881]
Length = 374
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/276 (51%), Positives = 188/276 (68%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R + GA+G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGVAIGATGETVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + + +GLVIR L++ SNWR +TL +YL ERNI+ I D+DTR +TR LR
Sbjct: 65 VTAEDEESSRIWASGLVIRDLAMTVSNWRSEQTLPDYLRERNIVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + ++ + + L ++ + + G+DL +VS E + W EST WD
Sbjct: 125 KGAQNGCILAGDNVDEAQALAAAKGFPGLKGMDLAKEVSVAESYSWTEST---WDLEKGH 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYD+G+K NILR LA GC++ VVP+ PASE L +KPDGV SNGPGD
Sbjct: 182 TEQGETRFHVVAYDYGVKRNILRMLAERGCKLTVVPAQTPASEVLAMKPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A ++E++ +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIAAIQEIVATGLPVFGICLGHQLLALASG 277
>gi|427726220|ref|YP_007073497.1| carbamoyl-phosphate synthase small subunit [Leptolyngbya sp. PCC
7376]
gi|427357940|gb|AFY40663.1| carbamoyl-phosphate synthase small subunit [Leptolyngbya sp. PCC
7376]
Length = 378
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 187/273 (68%), Gaps = 1/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA+GT GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 AVLVLADGTTYEGCSFGATGTTFGEVVFNTGMTGYQEVLTDPSYRGQVVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + G + R+++ SNWR + L +YL + N++GIY +DTR +TRRLR
Sbjct: 69 VTPEDEESGGPQVKGAIARNIAPRPSNWRSTQALPDYLKQHNVVGIYGIDTRDLTRRLRV 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE +++ L ++ + + G +L+ +V+ E +EW E+T W+F+ +
Sbjct: 129 SGAMNGAISTEVLDTEELLRQLQETPSMEGQNLVKEVTTTEIYEWTEATDSHWEFSNTTK 188
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ V+A DFG+K NILRRLASYGC++IVVP+ PA + L PDG+ SNGPGDP+A
Sbjct: 189 SDVDLTVVAVDFGVKRNILRRLASYGCKVIVVPANTPAEKILSYNPDGIFLSNGPGDPAA 248
Query: 248 VPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V +A VK++L + P FGICMGHQ+LG +LG
Sbjct: 249 VTEGIATVKDILKAEKPTFGICMGHQILGLSLG 281
>gi|440751669|ref|ZP_20930872.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
TAIHU98]
gi|440176162|gb|ELP55435.1| carbamoyl-phosphate synthase, small subunit [Microcystis aeruginosa
TAIHU98]
Length = 382
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|425451337|ref|ZP_18831159.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 7941]
gi|389767416|emb|CCI07182.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 7941]
Length = 382
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 189/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR +++L +YLA +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSSQSLPDYLAAHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTPPEKIADYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|163846443|ref|YP_001634487.1| carbamoyl-phosphate synthase small subunit [Chloroflexus
aurantiacus J-10-fl]
gi|163667732|gb|ABY34098.1| carbamoyl-phosphate synthase, small subunit [Chloroflexus
aurantiacus J-10-fl]
Length = 380
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 185/280 (66%), Gaps = 1/280 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
R +A LVLEDG ++ +SFGA G +VGEVVF+T +TGYQEILTDPSY GQ V MT
Sbjct: 2 RVQQTMDAVLVLEDGRVFPGRSFGAPGERVGEVVFHTGMTGYQEILTDPSYCGQLVTMTA 61
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN D ES Q +AG ++RS S S+WR +L L + I+ I DVDTRA
Sbjct: 62 PHIGNTGVNDFDPESIQPQVAGFIVRSYSEHYSSWRARGSLSQLLRDYGIVAISDVDTRA 121
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP-D 179
+TR +R G++ G++ST + L + + + G+DL V+ EP+ W ++ P
Sbjct: 122 LTRHIRTAGAMRGIISTTGESIESLLAKCRAAPPMEGLDLTQVVTCPEPYHWATNSVPFT 181
Query: 180 WDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ + V+AYDFG+K ILRRL +GC++ VVP+T P + L L+PDG+ FS
Sbjct: 182 PPYPNGPAQELRFHVVAYDFGLKRTILRRLVDHGCRVTVVPATTPPEDALALQPDGIFFS 241
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDP+A YAVA ++ LLGK+P+FGIC+GHQL+G ALG
Sbjct: 242 NGPGDPAAATYAVATLRSLLGKLPIFGICLGHQLMGLALG 281
>gi|427709003|ref|YP_007051380.1| carbamoyl-phosphate synthase small subunit [Nostoc sp. PCC 7107]
gi|427361508|gb|AFY44230.1| carbamoyl-phosphate synthase small subunit [Nostoc sp. PCC 7107]
Length = 388
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 191/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G + R++ SNWR ++L YL + + GIY +DTRA+TR++R
Sbjct: 69 VNSEDEESARPQARGAIARNICHKPSNWRSTQSLPEYLKQHQVPGIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +ST E + ELLE + + ++ G++L+ +VS + +EW E T +W+FN
Sbjct: 129 FGAMNGGIST-EILDEAELLEQVQGFPNMAGLNLVKEVSTPQVYEWSEPTIAEWEFNAEN 187
Query: 187 --RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+++ V+A DFG+K NILRRLASYGC++IVVP A+E L PDG+ SNGPGD
Sbjct: 188 VTPGGESFTVVALDFGVKRNILRRLASYGCRVIVVPVNTTAAEILSYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P+AV +A VK LL + P+FGICMGHQ+LG ALG
Sbjct: 248 PAAVTEGIATVKTLLESEKPMFGICMGHQILGHALG 283
>gi|282899516|ref|ZP_06307480.1| Carbamoyl-phosphate synthase, small subunit [Cylindrospermopsis
raciborskii CS-505]
gi|281195395|gb|EFA70328.1| Carbamoyl-phosphate synthase, small subunit [Cylindrospermopsis
raciborskii CS-505]
Length = 385
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS +R SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGSAYRGWSFGALGTTVGEVVFNTGMTGYQEVLTDPSYTGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G++ R++ SNWR + L YL ++ I GI+ +DTRA+TR++R
Sbjct: 69 VNPEDEESVRPHIKGVIARNICHQPSNWRSTQPLIEYLKQQQIPGIFGIDTRALTRKIRI 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
DG++ G +ST + + L + + + G++L+ V+ K+ +EW E T W+FN+
Sbjct: 129 DGAMNGGISTTILEETELLELVQAAPSMTGLNLVKQVTTKKVYEWSEPTPEVWEFNSQSS 188
Query: 188 NSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
SK V+A DFG+K NILRRLASYGC++IVVP+ A E L PDG+ SNGPGDP
Sbjct: 189 ASKGEALTVVALDFGVKRNILRRLASYGCRVIVVPAHTTAEEILAYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
+AV + K LLG K P+FGICMGHQ+LG ALG
Sbjct: 249 AAVTEGITTAKSLLGSKKPMFGICMGHQILGHALG 283
>gi|428773409|ref|YP_007165197.1| carbamoyl-phosphate synthase small subunit [Cyanobacterium stanieri
PCC 7202]
gi|428687688|gb|AFZ47548.1| carbamoyl-phosphate synthase small subunit [Cyanobacterium stanieri
PCC 7202]
Length = 380
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/275 (49%), Positives = 188/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT GEVVFNT +TGYQE+LTDPSY+GQ V T P +GNTG
Sbjct: 9 AILVLADGTSYTGYSFGAKGTTFGEVVFNTGMTGYQEVLTDPSYSGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R+L SNWR E+L +YL ++GIY +DTR +TRRLR
Sbjct: 69 VNPEDEESYKPHVKGAIARNLCKRPSNWRSTESLQDYLTRHKVVGIYGIDTRDLTRRLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +ST+ + ++ L+E+ + + G++L+ D++ KE +EW E+T +W+F+
Sbjct: 129 SGAMNGAISTDMLEPEELLMELQKVPSMAGLNLVKDITTKEVYEWNEATDKEWEFSPRAN 188
Query: 188 --NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ V+A DFG+K NILRRLASYGC++IVVP+ P + LK PDG+ SNGPGDP
Sbjct: 189 LGEGENLTVVAVDFGVKRNILRRLASYGCKVIVVPANTPPEDILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV +A K LL + P FGICMGHQ+LG +LG
Sbjct: 249 AAVAEGIATAKALLEAQKPTFGICMGHQILGLSLG 283
>gi|326796871|ref|YP_004314691.1| carbamoyl-phosphate synthase small subunit [Marinomonas
mediterranea MMB-1]
gi|326547635|gb|ADZ92855.1| carbamoyl-phosphate synthase, small subunit [Marinomonas
mediterranea MMB-1]
Length = 376
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 191/277 (68%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDG+I+R S GA G+ EVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SAILALEDGTIFRGVSIGADGSSTAEVVFNTSMTGYQEILTDPSYARQMVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES Q + +GL+IR L + S+WR ETL +YL + ++GI D+DTR +TR LR
Sbjct: 64 GVNSEDEESSQVWCSGLIIRDLPLLASSWRQEETLSDYLKRKGVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF-NT 184
+ G+ G + + ++++ + +R++ + G+DL +V+ KE +EW EST WD +
Sbjct: 124 EKGAQAGCIMAGDDLNEEDAVAAARAFPGLKGMDLAKEVTVKEQYEWTEST---WDLVDG 180
Query: 185 HERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
H K+ + V+AYDFG+K NILR L GC++ VVP+ PAS+ L L PDG+ SNGPG
Sbjct: 181 HTTPEKSDFHVVAYDFGVKRNILRMLVERGCRLTVVPAQTPASDVLALNPDGIFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAITAIKEILETEIPVFGICLGHQLLALASG 277
>gi|170079100|ref|YP_001735738.1| carbamoyl phosphate synthase small subunit [Synechococcus sp. PCC
7002]
gi|169886769|gb|ACB00483.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. PCC
7002]
Length = 380
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 185/273 (67%), Gaps = 1/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + +SFGA+GT GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTTYHGRSFGATGTTFGEVVFNTGMTGYQEVLTDPSYRGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + + G + R+++ SNWR + L +YL E ++GIY +DTR +TRRLR
Sbjct: 69 VTPEDEESSRPQVKGAIARNIAPRPSNWRSTQALPDYLKEHQVVGIYGIDTRDLTRRLRV 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE ++ L ++ + G +L+ DV+ +EW E T W+F++
Sbjct: 129 SGAMNGAISTEILDPEELLRQLQDVPSMEGQNLVKDVTTASVYEWTEITDRHWEFSSSAT 188
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++ V+A DFG+K NILRRLASYGC++IVVP+ PA + L PDG+ SNGPGDP+A
Sbjct: 189 EAQELTVVAIDFGVKRNILRRLASYGCRVIVVPADTPAEKILAYNPDGIFLSNGPGDPAA 248
Query: 248 VPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V +A VK++L + P FGICMGHQ+LG +LG
Sbjct: 249 VTEGIATVKDILKAEKPTFGICMGHQILGLSLG 281
>gi|222524217|ref|YP_002568688.1| carbamoyl-phosphate synthase small subunit [Chloroflexus sp.
Y-400-fl]
gi|222448096|gb|ACM52362.1| carbamoyl-phosphate synthase, small subunit [Chloroflexus sp.
Y-400-fl]
Length = 374
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/274 (50%), Positives = 184/274 (67%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG ++ +SFGA G +VGEVVF+T +TGYQEILTDPSY GQ V MT PHIGNT
Sbjct: 2 DAVLVLEDGRVFPGRSFGAPGERVGEVVFHTGMTGYQEILTDPSYCGQLVTMTAPHIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN D ES Q +AG ++RS S S+WR +L L + I+ I DVDTRA+TR +R
Sbjct: 62 GVNDFDPESIQPQVAGFIVRSYSEHYSSWRARGSLSQLLRDYGIVAISDVDTRALTRHIR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP-DWDFNTH 185
G++ G++ST + L + + + G+DL V+ EP+ W ++ P +
Sbjct: 122 TAGAMRGIISTTGESIESLLAKCRAAPPMEGLDLTQVVTCPEPYHWATNSVPFTPPYPNG 181
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ V+AYDFG+K ILRRL +GC++ VVP+T P + L L+PDG+ FSNGPGDP
Sbjct: 182 PAQELRFHVVAYDFGLKRTILRRLVDHGCRVTVVPATTPPEDALALQPDGIFFSNGPGDP 241
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+A YAVA ++ LLGK+P+FGIC+GHQL+G ALG
Sbjct: 242 AAATYAVATLRSLLGKLPIFGICLGHQLMGLALG 275
>gi|434394319|ref|YP_007129266.1| carbamoyl-phosphate synthase small subunit [Gloeocapsa sp. PCC
7428]
gi|428266160|gb|AFZ32106.1| carbamoyl-phosphate synthase small subunit [Gloeocapsa sp. PCC
7428]
Length = 387
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 187/280 (66%), Gaps = 3/280 (1%)
Query: 3 WNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPH 62
+N A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P
Sbjct: 4 FNAKPALLVLADGTAYRGFSFGATGTTIGEVVFNTGMTGYQEVLTDPSYYGQIVVFTYPE 63
Query: 63 IGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAIT 122
+GNTGVN DDEES + + G V R++ SNWR +L +YL + NI GIY +DTRA+T
Sbjct: 64 LGNTGVNPDDEESHKPQIRGAVTRNICYKPSNWRSTASLPDYLTQHNIPGIYGIDTRALT 123
Query: 123 RRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF 182
R++R G++ G +STE + L +++ + + G++L+ +V+ +EW + T W+F
Sbjct: 124 RKIRALGAMNGGISTEILDEAELLEQVTAAPSMKGLNLVREVTTANVYEWSDPTTAIWEF 183
Query: 183 N--THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ ++ V+A DFG+K NILRRLASYGC+IIVVP P E LK PDG+ SN
Sbjct: 184 KPVNQDNVAEPLTVVAIDFGVKRNILRRLASYGCRIIVVPVNTPPEEILKYNPDGIFLSN 243
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP+ V + K LL + P+FGICMGHQ+LG ALG
Sbjct: 244 GPGDPAPVTEGIETTKALLASQKPMFGICMGHQILGHALG 283
>gi|428306656|ref|YP_007143481.1| carbamoyl-phosphate synthase small subunit [Crinalium epipsammum
PCC 9333]
gi|428248191|gb|AFZ13971.1| carbamoyl-phosphate synthase small subunit [Crinalium epipsammum
PCC 9333]
Length = 383
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/276 (51%), Positives = 191/276 (69%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ ++ SFGASGT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 AILVLADGTTFKGWSFGASGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L +YL + NI GIY +DTRA+TR+LR
Sbjct: 69 VNPEDEESSKPQVRGAIARNICNRPSNWRSTQSLPDYLKKHNIPGIYGIDTRALTRKLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF---NT 184
G++ G +S E + L ++ + + G++L+ V+ KE +EW + T+ W+F N+
Sbjct: 129 VGAMNGAISNEILDPAELLQQVQSAPSMAGLNLVQQVTTKEVYEWSDPTETVWEFRPINS 188
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ ++++ V+A DFGIK NILRRLASYGC++IVVP+ A E K PDG+ SNGPGD
Sbjct: 189 TEQ-TESFTVVALDFGIKRNILRRLASYGCRVIVVPADTQADEIAKYNPDGIFLSNGPGD 247
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PSAV +A K LL PVFGICMGHQ+LG +LG
Sbjct: 248 PSAVTEGIATTKALLDSDKPVFGICMGHQILGLSLG 283
>gi|298491200|ref|YP_003721377.1| carbamoyl-phosphate synthase small subunit ['Nostoc azollae' 0708]
gi|298233118|gb|ADI64254.1| carbamoyl-phosphate synthase, small subunit ['Nostoc azollae' 0708]
Length = 385
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/274 (50%), Positives = 193/274 (70%), Gaps = 5/274 (1%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
LVL DG+ + SFGA GT +GEVVFNT +TGYQE+LTDPSY+GQ V+ T P +GNTGVN
Sbjct: 11 LVLADGTTYHGWSFGAMGTAIGEVVFNTGMTGYQEVLTDPSYSGQIVIFTYPELGNTGVN 70
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+DEES + ++ G V R++ SNWR ++L +YL + I GI+ +DTRA+TR++R G
Sbjct: 71 PEDEESAKPYVRGAVARNICHKPSNWRSTQSLPDYLKQHQIPGIFGIDTRALTRKIRMYG 130
Query: 130 SLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH--E 186
++ G +ST + + ELLE+ ++ ++ G++L+ +V+ +EW E+T W+FN
Sbjct: 131 AMNGGISTSIT-DEAELLELVQAAPNMTGLNLVREVTTPAAYEWSEATTAAWEFNPEGVA 189
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ +T+ V+A DFG+K NILRRLASYGC++IVV + P E LK PDG+ SNGPGDP+
Sbjct: 190 KIGETFTVVALDFGVKRNILRRLASYGCRVIVVSADTPPEEILKYNPDGIFLSNGPGDPA 249
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV ++ VK LL + P+FGICMGHQ+LG ALG
Sbjct: 250 AVTEGISTVKALLESQKPMFGICMGHQILGHALG 283
>gi|428778115|ref|YP_007169902.1| carbamoyl-phosphate synthase small subunit [Halothece sp. PCC 7418]
gi|428692394|gb|AFZ45688.1| carbamoyl-phosphate synthase small subunit [Halothece sp. PCC 7418]
Length = 381
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 187/279 (67%), Gaps = 3/279 (1%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
V A LVLEDG+++R KSFGA GT VGEVVFNT +TGYQE+LTDPSY GQ + T P +
Sbjct: 5 QVEPALLVLEDGTVFRGKSFGAKGTTVGEVVFNTGMTGYQEVLTDPSYRGQIITFTYPEL 64
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GNTGVN +DEES + G++ R++ SNWR ++ NYL E NI GIY +DTRA+TR
Sbjct: 65 GNTGVNPEDEESDSPQVRGVIARNVCYFPSNWRSRTSVPNYLTEHNIPGIYGIDTRALTR 124
Query: 124 RLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G++ G +S+E + L ++ + ++G++L+++V+ K+ +EW + T W+F
Sbjct: 125 ILRSSGAMNGAISSEILDEQELLAQVKAAPSMLGLNLVNEVTTKDVYEWSDPTVESWEFR 184
Query: 184 --THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+S V+A DFGIK NILRRLASYGC++IVVP+ P + PDG+ SNG
Sbjct: 185 PVMQAEDSTPLTVVAIDFGIKRNILRRLASYGCRVIVVPANTPPETIEQYHPDGIFLSNG 244
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ V + K LL G P+FGICMGHQ+LG +LG
Sbjct: 245 PGDPATVTEGIETTKALLKGGKPMFGICMGHQILGLSLG 283
>gi|219849515|ref|YP_002463948.1| carbamoyl-phosphate synthase small subunit [Chloroflexus aggregans
DSM 9485]
gi|219543774|gb|ACL25512.1| carbamoyl-phosphate synthase, small subunit [Chloroflexus aggregans
DSM 9485]
Length = 374
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 137/274 (50%), Positives = 185/274 (67%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG ++ +SFGA G ++GEVVF+T +TGYQEILTDPSY GQ V MT PHIGNT
Sbjct: 2 DAVLVLEDGRVFPGRSFGAPGERIGEVVFHTGMTGYQEILTDPSYCGQLVTMTAPHIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN D ES Q +AG ++R+ S S+WR +L L + I+ I +VDTRA+TR +R
Sbjct: 62 GVNDFDPESIQPQVAGFIVRNYSEHYSSWRARGSLSQLLRDYGIVAISEVDTRALTRHIR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP-DWDFNTH 185
G++ G++ST + L + + + G DL V+ EP+ W +++P +
Sbjct: 122 TAGAMRGIISTTGESIETLLAKCRAAPPMEGQDLTQVVTCPEPYHWTTNSEPFTPPYPNG 181
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
TY V+AYDFGIK ILRRL +GC++ VVP+T +E L L+PDG+ FSNGPGDP
Sbjct: 182 PAKELTYHVVAYDFGIKRTILRRLVDHGCRVTVVPATTSPAEALALRPDGIFFSNGPGDP 241
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+A YAVA ++ LLGK+P+FGIC+GHQL+G ALG
Sbjct: 242 AAATYAVATLRALLGKLPIFGICLGHQLMGLALG 275
>gi|375336358|ref|ZP_09777702.1| carbamoyl-phosphate synthase small subunit [Succinivibrionaceae
bacterium WG-1]
Length = 379
Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/279 (50%), Positives = 189/279 (67%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL+DG+++R SFGA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 4 SALLVLQDGTVFRGVSFGAKGVAVGEVVFNTSMTGYQEILTDPSYSKQIVTLTYPHIGNY 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R +L +YL + N++GI D+DTR +TR LR
Sbjct: 64 GCNSEDEESSSVHPQGLVIRDLPLLVSNFRSEMSLSDYLVKHNVVGICDIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + T + + + L++++ + + G+DL +V+ KE +EW E T W
Sbjct: 124 EKGAQAGCIITTDDLDEAKALQLAKDFPGMKGLDLAKEVTCKEKYEWTEGT---WTLGQG 180
Query: 185 -HERNSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H++++K Y V+AYDFG K NILR LA GC++ VVP+T PASE L + PDGV SNG
Sbjct: 181 YHKQDAKDLPYHVVAYDFGAKRNILRMLAERGCRLTVVPATTPASEVLAMNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA +K +L K +P+FGIC+GHQLLG A G
Sbjct: 241 PGDPEPCTYAQEAIKAILDKNIPIFGICLGHQLLGLASG 279
>gi|428210172|ref|YP_007094525.1| carbamoyl-phosphate synthase small subunit [Chroococcidiopsis
thermalis PCC 7203]
gi|428012093|gb|AFY90656.1| carbamoyl-phosphate synthase small subunit [Chroococcidiopsis
thermalis PCC 7203]
Length = 378
Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 185/273 (67%), Gaps = 1/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA+GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 6 ALLVLADGTAYHGLSFGATGTTVGEVVFNTGMTGYQEVLTDPSYRGQIVTFTYPELGNTG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + +++ SNWR +L +YL + NI GIY +DTRA+ R++R+
Sbjct: 66 VNPEDEESDRPQVKGAIAKNVCYRPSNWRSTGSLPDYLKQHNIPGIYGIDTRALVRKIRE 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
GS+ G +STE + L + + + G++L+S+V+ +EW +T W+F
Sbjct: 126 VGSMNGAISTEILDEAELLQLVLAAPSMAGLNLVSEVTTSTAYEWAGTTDSVWEFKPVSP 185
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ +T V+A DFGIK NILRRLASYGC++IVVP+ P E LK PDG+ SNGPGDP+A
Sbjct: 186 DGETLTVVAIDFGIKRNILRRLASYGCRVIVVPANTPPEEILKYNPDGIFLSNGPGDPAA 245
Query: 248 VPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V + K LL + P+FGICMGHQ+LG+ALG
Sbjct: 246 VAEGLETTKALLSAQKPIFGICMGHQILGRALG 278
>gi|254448817|ref|ZP_05062273.1| carbamoyl-phosphate synthase, small subunit [gamma proteobacterium
HTCC5015]
gi|198261507|gb|EDY85796.1| carbamoyl-phosphate synthase, small subunit [gamma proteobacterium
HTCC5015]
Length = 379
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 144/278 (51%), Positives = 187/278 (67%), Gaps = 10/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS +R S GA G VGEVVFNT+++GYQEILTDPSYA Q V +T PHIGN G
Sbjct: 9 ALLVLEDGSFFRGVSIGAEGHTVGEVVFNTAMSGYQEILTDPSYARQIVTLTYPHIGNVG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + AGLVIR L + TSNWR +E L +YL NI+ I D+DTR +TR LR
Sbjct: 69 TNAEDEESDRVHAAGLVIRDLPMLTSNWRSSEPLADYLKRHNIVAIADIDTRRLTRILRD 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---N 183
GS G + T + S+ E LE +R++ + G+DL +V+ + + W E + WD +
Sbjct: 129 KGSQNGCIVT-GAVSEDEALEKARAFPGLKGMDLAKEVTVTDAYSWSEGS---WDLEQGH 184
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + ++V+AYDFG+K NILR LA GC + VVP+ PASE L +KPDGV SNGPG
Sbjct: 185 VDRSDDQRFKVVAYDFGVKRNILRMLADRGCDLTVVPAQTPASEVLAMKPDGVFLSNGPG 244
Query: 244 DPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
DP YA+ ++++L G+ PVFGIC+GHQLLG A G
Sbjct: 245 DPEPCDYAIEAIQQILDHGETPVFGICLGHQLLGLASG 282
>gi|411119155|ref|ZP_11391535.1| carbamoyl-phosphate synthase small subunit [Oscillatoriales
cyanobacterium JSC-12]
gi|410711018|gb|EKQ68525.1| carbamoyl-phosphate synthase small subunit [Oscillatoriales
cyanobacterium JSC-12]
Length = 384
Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 141/280 (50%), Positives = 189/280 (67%), Gaps = 2/280 (0%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P + +A LVL DGS + SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P
Sbjct: 3 PSSGQSALLVLADGSSYPGWSFGAVGTAIGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYP 62
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
+GNTGVN DDEES + G++ R++ SNWR ++L +YL + N++GIY +DTRA+
Sbjct: 63 ELGNTGVNPDDEESTRPQARGVIARNVCARPSNWRSTQSLQDYLKQHNVLGIYGIDTRAL 122
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD 181
TR+LR GS+ G +STE + L ++ + + G++L+ +V+ +EW EST W+
Sbjct: 123 TRKLRSVGSMNGAISTEILDPIELLQKVQDAPAMAGLNLVREVTTPTVYEWSESTPDVWE 182
Query: 182 FN-THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
F+ T + V+A DFG+K NILRRLAS+GC++IVVPST P E LK PDG+ SN
Sbjct: 183 FSPTATPDGDRLTVVAIDFGVKRNILRRLASHGCRVIVVPSTTPPEEILKYNPDGIFLSN 242
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP+AV + K LL P+FGICMGHQ+LG +LG
Sbjct: 243 GPGDPAAVTEGIETAKALLAANKPMFGICMGHQILGLSLG 282
>gi|434389417|ref|YP_007100028.1| carbamoyl-phosphate synthase, small subunit [Chamaesiphon minutus
PCC 6605]
gi|428020407|gb|AFY96501.1| carbamoyl-phosphate synthase, small subunit [Chamaesiphon minutus
PCC 6605]
Length = 384
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/279 (50%), Positives = 189/279 (67%), Gaps = 5/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
V A LVL DG+ + SFGA GT +GEVVFNT +TGYQE+LTDPSY+GQ V+ T P +G
Sbjct: 6 VLPALLVLADGTTYPGWSFGAMGTTIGEVVFNTGMTGYQEVLTDPSYSGQIVVFTYPELG 65
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTGVN DDEES + G + R++ SNWR +L YL NI GIY +DTRA+TR+
Sbjct: 66 NTGVNPDDEESHAPHVRGAIARNVCYRPSNWRSTASLPKYLEHHNIPGIYGIDTRALTRK 125
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G++ G +ST E ELL + +S + G++L+ +V+ KE +EW + ++ W+F
Sbjct: 126 LRSAGAMNGAIST-EILDPAELLNLVKSAPSMSGLNLVDNVTTKEVYEWSQPSEAMWEFK 184
Query: 184 THER--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+S+ V+A DFG+K NIL+RLASYGC++IVVP+ A+E LK PDG+ SNG
Sbjct: 185 PAAAAGDSQPLTVVALDFGVKRNILKRLASYGCRVIVVPANTSAAEILKHDPDGIFLSNG 244
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+AV +A KELL P+FGICMGHQ+LG +LG
Sbjct: 245 PGDPAAVTEGIATTKELLSADKPIFGICMGHQILGLSLG 283
>gi|186681665|ref|YP_001864861.1| carbamoyl phosphate synthase small subunit [Nostoc punctiforme PCC
73102]
gi|186464117|gb|ACC79918.1| carbamoyl-phosphate synthase, small subunit [Nostoc punctiforme PCC
73102]
Length = 388
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 186/275 (67%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTTYRGWSFGATGTAIGEVVFNTGMTGYQEVLTDPSYCGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +DEES + G + R++ SNWR ++L +YL + + GIY +DTRA+TR++R
Sbjct: 69 INLEDEESDGPQVRGAIARNICQRPSNWRSTQSLPDYLKQNQVPGIYGIDTRALTRKIRM 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G +ST + L ++ + ++ G++L+ +V+ +EW + T P W+FN
Sbjct: 129 FGAMNGGISTTILDEAELLEQVQAAPNMAGLNLVREVTTSTAYEWSDPTIPAWEFNCEAA 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + + V+A DFG+K NILRRL SYGC++IVVP+ P E L PDGV SNGPGDP
Sbjct: 189 ENLGEAFTVVALDFGVKRNILRRLVSYGCRVIVVPADTPPEEILNYNPDGVFLSNGPGDP 248
Query: 246 SAVPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
+AV +A K LL + P+FGICMGHQ+LG ALG
Sbjct: 249 AAVTGGIATAKALLLSQKPIFGICMGHQILGHALG 283
>gi|428298242|ref|YP_007136548.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 6303]
gi|428234786|gb|AFZ00576.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 6303]
Length = 392
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTSYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVVFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR E+L +YL + I GIY +DTRA+TR++R
Sbjct: 69 VNSEDEESERPQVRGAISRNICHKPSNWRSTESLPDYLKKNQIPGIYGIDTRALTRKIRI 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF--NTH 185
G++ G +STE + ++ + + G++L +V+ +EW E T W+F N H
Sbjct: 129 HGAMNGGISTEILDEAELWEKVQTAPTMAGLNLAREVTTSSVYEWSEPTTEIWEFNPNCH 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
++T+ V+A DFG+K NILRRLASYGC+++VVP A E +K PDG+ SNGPGDP
Sbjct: 189 TNANETFTVVALDFGVKRNILRRLASYGCRVVVVPLHTSAEEIMKHNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + KELL + P+FGICMGHQ+LG ALG
Sbjct: 249 SAVTEGIETTKELLKSEKPMFGICMGHQILGHALG 283
>gi|350570528|ref|ZP_08938881.1| carbamoyl-phosphate synthase, small subunit [Neisseria wadsworthii
9715]
gi|349796153|gb|EGZ49943.1| carbamoyl-phosphate synthase, small subunit [Neisseria wadsworthii
9715]
Length = 376
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 182/275 (66%), Gaps = 5/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R S G +G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFRGTSIGHAGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR + AGL+IR L + SN+R E+L YL + I D+DTR +TR LR
Sbjct: 65 TNEEDVESRSVYAAGLIIRDLPLLHSNFRSKESLQEYLVRNQTVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + T E ++++ E+ ++ +VG DL +VS EP+EW E K F T
Sbjct: 125 KGAQAGAILTGEDATEEKARELIAAFGSMVGKDLAKEVSCTEPYEWTEGEWKLGKGFQTP 184
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + Y V+AYDFG+K NILR LA GC++ VVP+ PA + L + PDGV SNGPGDP
Sbjct: 185 EE--QPYHVVAYDFGVKTNILRMLAERGCRLTVVPAQTPAKDVLAMNPDGVFLSNGPGDP 242
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YAVA VKELL K PVFGIC+GHQLLG A+G
Sbjct: 243 EPCDYAVAAVKELLESKKPVFGICLGHQLLGLAVG 277
>gi|443312141|ref|ZP_21041761.1| carbamoyl-phosphate synthase, small subunit [Synechocystis sp. PCC
7509]
gi|442777819|gb|ELR88092.1| carbamoyl-phosphate synthase, small subunit [Synechocystis sp. PCC
7509]
Length = 377
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/277 (50%), Positives = 192/277 (69%), Gaps = 6/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ ++ T P +GNT
Sbjct: 4 SAILVLADGTTYRGLSFGATGTTIGEVVFNTGMTGYQEVLTDPSYRGQMIVFTYPELGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEESR + G + R++ SNWR +L +YL + NI GIY +DTRA+TR++R
Sbjct: 64 GCNDEDEESRGPQVRGAIARNVCDRPSNWRSTSSLSDYLKKHNIPGIYGIDTRALTRKIR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN-- 183
G++ G +STE ++D LLE+ ++ D+ G++L+ +V+ + +EW E T W+F
Sbjct: 124 VLGAMNGGISTELDETD--LLELIQTAPDMAGLNLVREVTTTKVYEWSEVTTNVWEFKPA 181
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
T K V+A DFGIK NILRRLASYGC++IVVP++ PA E +K PDG+ SNGPG
Sbjct: 182 TEPIIEKQLTVVALDFGIKRNILRRLASYGCRVIVVPASTPAEEIMKYNPDGIFLSNGPG 241
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+A + K LL + PVFGICMGHQ+LG +LG
Sbjct: 242 DPAANIEGIETTKALLTSQKPVFGICMGHQILGLSLG 278
>gi|282896445|ref|ZP_06304466.1| Carbamoyl-phosphate synthase, small subunit [Raphidiopsis brookii
D9]
gi|281198733|gb|EFA73613.1| Carbamoyl-phosphate synthase, small subunit [Raphidiopsis brookii
D9]
Length = 385
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS +R SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 AILVLADGSAYRGWSFGAIGTTVGEVVFNTGMTGYQEVLTDPSYTGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D+ES + + G++ R++ SNWR + L YL ++ I GI+ +DTR+ITR++R
Sbjct: 69 VNPEDDESVRPHIKGVIARNICHQPSNWRSTQPLTEYLKQQQIPGIFGIDTRSITRKIRI 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE- 186
DG++ G +ST + + L + + + G++L+ V+ K+ +EW E T W+FN+
Sbjct: 129 DGAMNGGISTTILEETELLELVQAAPIMSGLNLVKQVTTKKVYEWSEPTPEAWEFNSQSS 188
Query: 187 -RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + V+A DFG+K NILRRLASYGC++IVVP+ A E L PDG+ SNGPGDP
Sbjct: 189 AKQGEALTVVALDFGVKRNILRRLASYGCRVIVVPAHTTAEEILAYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
+AV + K LLG K P+FGICMGHQ+LG ALG
Sbjct: 249 AAVTEGITTAKSLLGSKKPMFGICMGHQILGHALG 283
>gi|425467412|ref|ZP_18846695.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9809]
gi|389829834|emb|CCI28536.1| Carbamoyl-phosphate synthase small chain [Microcystis aeruginosa
PCC 9809]
Length = 382
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 188/274 (68%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ SFG+ GT VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 9 KALLVLADGTVYEGYSFGSKGTTVGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + + G + +++ SNWR ++L +YLA+ +++GIY +DTR++TR++R
Sbjct: 69 GVNPEDEESIRPQVKGAIAKNICHRPSNWRSTQSLPDYLADHHVIGIYGIDTRSLTRKIR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G +STE L + + + G++L+ +V+ KE +EW T W+F +
Sbjct: 129 SVGAMNGAISTEILDYHDLLRLVQAAPSMAGLNLVKEVTTKEVYEWTTPTPSAWEFAPID 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+A DFGIK NILRRLASYGC++IVVP+ + PDG+ FSNGPGDP+
Sbjct: 189 SDQEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTLPEKIAAYNPDGIFFSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV +A+ K+LL G+ P FGICMGHQ+LG +LG
Sbjct: 249 AVTEGIALAKQLLQGEKPTFGICMGHQILGLSLG 282
>gi|359461742|ref|ZP_09250305.1| carbamoyl phosphate synthase small subunit [Acaryochloris sp. CCMEE
5410]
Length = 385
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 185/277 (66%), Gaps = 5/277 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS +R SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGSSYRGWSFGAPGTAVGEVVFNTGMTGYQEVLTDPSYCGQLVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R+L SNWR TL NYL + +I GIY +DTRA+TR++R
Sbjct: 69 VNIEDEESDRPQVKGAIARNLCHQPSNWRSTHTLSNYLQQHHIPGIYGIDTRALTRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G +STE S+ L + ++ + G++L V+ +EWV+ T DW+F+
Sbjct: 129 AGAMNGAISTEILDSNALLETVLQAPSMEGLNLAERVTTHTAYEWVDPTPIDWEFSESIP 188
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ V+A DFGIK NILRRLASYGC+IIVVP+ A++ L +PDG+ SNGPG
Sbjct: 189 PADSTQPPLTVVAIDFGIKRNILRRLASYGCRIIVVPAHTSAADILSHQPDGIFLSNGPG 248
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP+AV + K L+ + P+FGIC+GHQLLG +LG
Sbjct: 249 DPAAVTVGIETAKTLMAEQKPMFGICLGHQLLGLSLG 285
>gi|119487912|ref|ZP_01621409.1| carbamoyl-phosphate synthase small subunit [Lyngbya sp. PCC 8106]
gi|119455488|gb|EAW36626.1| carbamoyl-phosphate synthase small subunit [Lyngbya sp. PCC 8106]
Length = 383
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/277 (49%), Positives = 189/277 (68%), Gaps = 5/277 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGASGT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTTFRGWSFGASGTVVGEVVFNTGMTGYQEVLTDPSYLGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES++ + G + R++ SNWR ++L +YL + I GIY +DTRA+TR++R
Sbjct: 69 VNPEDEESQRPQVRGAIARNICTRPSNWRSTQSLSDYLKQHQIPGIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF----N 183
G++ G +STE + ++ ++ + G++L+ +V+ K +EW ++T W+F +
Sbjct: 129 VGAMNGAISTEILDPAELRSQVEQAPSMAGLNLVKEVTTKTMYEWSQATDRIWEFSPSLS 188
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ E Y V+A DFGIK NILRRLASYGC+++VVP+ A E LK PDG+ SNGPG
Sbjct: 189 SGEAVEPRYTVVAIDFGIKRNILRRLASYGCRVVVVPADTSAEEILKYNPDGIFLSNGPG 248
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+ V +A +ELL PVFGICMGHQ+LG ++G
Sbjct: 249 DPATVTEGIATTRELLKSSKPVFGICMGHQILGLSMG 285
>gi|254421272|ref|ZP_05034990.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. PCC
7335]
gi|196188761|gb|EDX83725.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. PCC
7335]
Length = 397
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 193/281 (68%), Gaps = 9/281 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGSI+R SFGA+GT +GEVVFNT +TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLEDGSIYRGWSFGATGTSMGEVVFNTGMTGYQEVMTDPSYCGQMVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + ++ G + +++ SNWR ++L +YL + I GI+ +DTRA+TR+LR
Sbjct: 69 VNPEDEESVRPYIKGAIAKNVCDRPSNWRSTQSLSDYLIDHQIPGIHGIDTRALTRKLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF----- 182
G++ G+LS+E D+ L ++ + G++L+ +V+ + +EW E T+ +W F
Sbjct: 129 VGAMNGILSSEILDPDELLRQLQTLPSMEGLNLVKEVTTDKVYEWKEITEENWAFTASDT 188
Query: 183 ---NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
N+ + V+A DFGIK NIL+RLASYGC++IVVP+ A + L +PDG+ S
Sbjct: 189 DLVNSQGVDQPPLTVVAIDFGIKRNILKRLASYGCKVIVVPADTSAEDVLSYRPDGIFLS 248
Query: 240 NGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
NGPGDP+AV A A+ + LL ++P FGICMGHQ+LG +LG
Sbjct: 249 NGPGDPAAVTGAPAVTQALLASELPTFGICMGHQILGLSLG 289
>gi|334117978|ref|ZP_08492068.1| carbamoyl-phosphate synthase, small subunit [Microcoleus vaginatus
FGP-2]
gi|333459963|gb|EGK88573.1| carbamoyl-phosphate synthase, small subunit [Microcoleus vaginatus
FGP-2]
Length = 385
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/275 (50%), Positives = 189/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA T VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGADATVVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWRC+++L +YL + +I GIY +DTRA+TR++R
Sbjct: 69 VNLEDEESSRPQIRGAIARNVCSRPSNWRCSQSLQDYLKQYDIPGIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +ST + L ++ + + G++L+ +V+ +E +EW E+T W+F+ +
Sbjct: 129 VGAINGGISTTILDQAELLEQVQDAPSMDGLNLVQEVTTREVYEWSEATDSVWEFSPTVK 188
Query: 188 --NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
N + + V+A DFGIK NILRRLASYGC++IVVP+ E LK PDG+ SNGPGDP
Sbjct: 189 PANGEMWTVVALDFGIKRNILRRLASYGCRVIVVPADTSPEEILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV +A K LL PVFGICMGHQ+LG +LG
Sbjct: 249 AAVTEGIATAKALLKSDKPVFGICMGHQILGLSLG 283
>gi|427716428|ref|YP_007064422.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 7507]
gi|427348864|gb|AFY31588.1| carbamoyl-phosphate synthase small subunit [Calothrix sp. PCC 7507]
Length = 426
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 47 ALLVLADGTTYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYRGQIVVFTYPELGNTG 106
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L +YL + + GIY +DTRA+TR++R
Sbjct: 107 VNSEDEESTRPQVQGAIARNICHKPSNWRSTQSLPDYLKQHQVPGIYGIDTRALTRKIRT 166
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G +ST + L + + ++ G++L+ +V+ + +EW + T P W+FN
Sbjct: 167 VGAINGGISTSILDEVELLERVQAAPNMTGLNLVGEVTTPDVYEWSDPTAPAWEFNQDGV 226
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ ++ V+A DFG+K NILRRLASYGC+IIVVP+ E L PDG+ SNGPGDP
Sbjct: 227 ANAAASFTVVALDFGVKRNILRRLASYGCRIIVVPAHTSPEEILSYNPDGIFLSNGPGDP 286
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV +A K LL + P+FGICMGHQ+LG ALG
Sbjct: 287 AAVTEGIATTKALLESQKPIFGICMGHQILGHALG 321
>gi|17228650|ref|NP_485198.1| carbamoyl phosphate synthase small subunit [Nostoc sp. PCC 7120]
gi|21759034|sp|Q8YXQ7.1|CARA_ANASP RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|17130501|dbj|BAB73112.1| carbamoyl phosphate synthase small subunit [Nostoc sp. PCC 7120]
Length = 388
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 135/275 (49%), Positives = 189/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYRGQIVVFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L +YL + +I GI+ +DTRA+TR++R
Sbjct: 69 VNPEDEESARPQVRGAIARNICHKPSNWRSTQSLPDYLKQHHIPGIFGIDTRALTRKIRM 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE- 186
G++ G +STE + L ++ + ++ G++L+ +V+ +EW + T W+FN
Sbjct: 129 YGAMNGGISTEILDEAELLEQVQAAPNMAGLNLVREVTTSTVYEWSDPTTAVWEFNPDGT 188
Query: 187 -RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+N ++ V+A DFG+K NILRRLASYGC++IVVP+ E LK PDG+ SNGPGDP
Sbjct: 189 VKNGESLTVVALDFGVKRNILRRLASYGCRVIVVPADTSPEEILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + K LL + P+FGICMGHQ+LG ALG
Sbjct: 249 SAVTEGITTAKALLESEKPIFGICMGHQILGHALG 283
>gi|37523112|ref|NP_926489.1| carbamoyl phosphate synthase small subunit [Gloeobacter violaceus
PCC 7421]
gi|35214115|dbj|BAC91484.1| carbamoyl phosphate synthase small subunit [Gloeobacter violaceus
PCC 7421]
Length = 384
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 136/273 (49%), Positives = 183/273 (67%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
ARLVLEDG+ + SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 7 ARLVLEDGTAFEGWSFGAPGTSVGEVVFNTGMTGYQEVLTDPSYCGQIVAFTYPELGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + + G++ +++ S+WR ++LG+YL + I+ I +DTRA+TR LR
Sbjct: 67 VNLEDAESDRPQVRGVIAHNVAGRPSSWRATQSLGDYLKDHAIVAIASIDTRALTRHLRS 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE S ++ L + + + G+DL+ V+ P+ W EST DW
Sbjct: 127 RGAMNGAISTELS-TEALLARLQEAPAMQGLDLVPRVTTAAPYTWSESTAADWLATRAAA 185
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ RV+A DFGIKHNILRRLASYGC++IVVP+ L +PDG+ SNGPGDP+A
Sbjct: 186 GERPLRVVAIDFGIKHNILRRLASYGCEVIVVPADTGVEAILAYRPDGIFLSNGPGDPAA 245
Query: 248 VPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V Y + V+ LL + P+FGIC+GHQ+L ALG
Sbjct: 246 VRYGIETVQGLLKSRKPMFGICLGHQILALALG 278
>gi|413923628|gb|AFW63560.1| hypothetical protein ZEAMMB73_621614 [Zea mays]
Length = 262
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 131/158 (82%), Positives = 144/158 (91%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RPW +++ARLVLEDGS+W AKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN
Sbjct: 105 RPWKLSDARLVLEDGSVWTAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 164
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTGVN DDEES QCFL GL+IR+LSI TSNWRC ETL YL +RNIMGIYDVDTRA
Sbjct: 165 PHIGNTGVNPDDEESNQCFLGGLIIRNLSICTSNWRCKETLEKYLIKRNIMGIYDVDTRA 224
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGI 158
ITRRLR+DGSLIGVLST++S +D ELLEM++ W IVGI
Sbjct: 225 ITRRLREDGSLIGVLSTDQSLTDNELLEMAQKWKIVGI 262
>gi|158338297|ref|YP_001519474.1| carbamoyl phosphate synthase small subunit [Acaryochloris marina
MBIC11017]
gi|158308538|gb|ABW30155.1| carbamoyl-phosphate synthase, small subunit [Acaryochloris marina
MBIC11017]
Length = 385
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 139/277 (50%), Positives = 185/277 (66%), Gaps = 5/277 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS +R SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGSSYRGWSFGAPGTAVGEVVFNTGMTGYQEVLTDPSYCGQLVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R+L SNWR TL +YL + +I GIY +DTRA+TR++R
Sbjct: 69 VNIEDEESDRPQVKGAIARNLCHQPSNWRSNHTLSSYLQQHHIPGIYGIDTRALTRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G++ G +STE S+ L + ++ + G++L V+ P+EWV+ T W+F+
Sbjct: 129 AGAMNGAISTEILDSNALLETVLQAPSMEGLNLAERVTTHTPYEWVDPTPAAWEFSESTP 188
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ V+A DFGIK NILRRLASYGC+IIVVP+ A++ L +PDG+ SNGPG
Sbjct: 189 PADSTQSPLTVVAIDFGIKRNILRRLASYGCRIIVVPAHTSAADILSHQPDGIFLSNGPG 248
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP+AV + K L+ + P+FGIC+GHQLLG +LG
Sbjct: 249 DPAAVTVGIETAKTLMAEQKPMFGICLGHQLLGLSLG 285
>gi|427417027|ref|ZP_18907210.1| carbamoyl-phosphate synthase, small subunit [Leptolyngbya sp. PCC
7375]
gi|425759740|gb|EKV00593.1| carbamoyl-phosphate synthase, small subunit [Leptolyngbya sp. PCC
7375]
Length = 390
Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 138/278 (49%), Positives = 189/278 (67%), Gaps = 6/278 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R SFGA+GT VGE+VFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 11 ALLVLADGSVFRGWSFGATGTVVGEIVFNTGMTGYQEVLTDPSYRGQIVTFTYPELGNTG 70
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D+ES + G + +++ SNWR +L ++L + NI GIY +DTRA+TR+LR
Sbjct: 71 INNEDDESATPQVNGAIAKNICECPSNWRSTTSLPDHLKQHNIPGIYGIDTRALTRKLRT 130
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--- 184
G++ G +S+E ++ L ++ + G++L+ +VS E +EW E T W+F +
Sbjct: 131 VGAMNGAISSEILDPERLLQQLELIPSMEGLNLVKEVSTTEVYEWTEPTDTHWEFTSTTS 190
Query: 185 --HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
H+ + V+A DFGIK NILRRLAS+GC++IVVP E LK KPDG+ SNGP
Sbjct: 191 TAHDGTATPLTVVAIDFGIKRNILRRLASHGCRVIVVPIDTAPEEILKHKPDGIFLSNGP 250
Query: 243 GDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GDP+AV A A+VK LL ++P FGICMGHQ+LG +LG
Sbjct: 251 GDPAAVESAPALVKALLDSELPTFGICMGHQILGLSLG 288
>gi|300869381|ref|ZP_07113968.1| carbamoyl phosphate synthase small subunit [Oscillatoria sp. PCC
6506]
gi|300332608|emb|CBN59166.1| carbamoyl phosphate synthase small subunit [Oscillatoria sp. PCC
6506]
Length = 384
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 187/274 (68%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGANGTVVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + R++ SNWR ++L +YL +I GIY +DTRA+TR++R
Sbjct: 69 VNVEDEESHGPQVRAAIARNICHKPSNWRSTQSLPDYLKHHSIPGIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-E 186
G++ G +STE + L ++ + + G++L+ V+ E +EW E T+ +W+F+
Sbjct: 129 VGAMNGGISTEILDPAELLEQVQEAPSMAGLNLVRQVTTSEVYEWSEPTESNWEFSDGIN 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+++ V+A DFGIK NILRRLASYGC+++VVP+ P E LK KPDG+ SNGPGDP+
Sbjct: 189 SDAEILTVVAIDFGIKRNILRRLASYGCRVVVVPANTPPEEILKYKPDGIFLSNGPGDPA 248
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V + K LL + P+FGICMGHQ+LG++LG
Sbjct: 249 TVIEGIETTKALLKSEKPIFGICMGHQILGRSLG 282
>gi|383936851|ref|ZP_09990270.1| carbamoyl-phosphate synthase small subunit [Rheinheimera
nanhaiensis E407-8]
gi|383702088|dbj|GAB60361.1| carbamoyl-phosphate synthase small subunit [Rheinheimera
nanhaiensis E407-8]
Length = 376
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 186/277 (67%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGVSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES Q + GL+IR L + SN+R +L YL + NI+GI D+DTR +TR LR
Sbjct: 64 GTNLEDEESGQIWARGLIIRDLPLLASNFRNQLSLSQYLTQHNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G L ++ + + L++++ + + G+DL +V+ K P++W E + W
Sbjct: 124 EKGAQNGCLMAGDNLDEAKALQLAKGFPGLSGMDLAKEVTVKAPYQWTEGS---WQLGEG 180
Query: 186 ER--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
R ++ + V+AYD+G+K NILR LA GC++ VVP+ PASE L + PDG+ SNGPG
Sbjct: 181 HRTPDNAKFHVVAYDYGVKRNILRMLADRGCKLTVVPAQTPASEVLAMNPDGIFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP+ YA+ +K L +P+FGIC+GHQLL A G
Sbjct: 241 DPAPCTYAIDAIKTFLDTDIPIFGICLGHQLLALASG 277
>gi|428308941|ref|YP_007119918.1| carbamoyl-phosphate synthase small subunit [Microcoleus sp. PCC
7113]
gi|428250553|gb|AFZ16512.1| carbamoyl-phosphate synthase small subunit [Microcoleus sp. PCC
7113]
Length = 385
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ ++ SFGA+GT +GEVVFNT++TGYQE+ TDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTSYQGWSFGATGTAIGEVVFNTAMTGYQEVATDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G + R++ SNWR ++L +YL ERNI GIY +DTR++TR+LR
Sbjct: 69 VNPEDEESAHPHIRGAIARNICWRPSNWRSTQSLPDYLKERNIPGIYGIDTRSLTRKLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +STE + + L +++ + + G++L+ +V+ E +EW + T W+F
Sbjct: 129 SGAMNGGISTEILDAGELLKQVTAAPSMAGLNLVREVTTTEVYEWSDPTDSHWEFGPVVD 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
N + V+A DFGIK NILRRLASYGC++IVVP+ E LK PDG+ SNGPGDP
Sbjct: 189 GNNRELLTVVAIDFGIKRNILRRLASYGCRVIVVPADTSPEEILKHNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+AV + K LL + PVFGICMGHQ+LG ++G
Sbjct: 249 AAVSEGIETTKALLKQEKPVFGICMGHQILGLSMG 283
>gi|75910607|ref|YP_324903.1| carbamoyl phosphate synthase small subunit [Anabaena variabilis
ATCC 29413]
gi|75704332|gb|ABA24008.1| carbamoyl-phosphate synthase small subunit [Anabaena variabilis
ATCC 29413]
Length = 388
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/275 (49%), Positives = 187/275 (68%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVVFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR A++L +YL + I GI+ +DTRA+TR++R
Sbjct: 69 VNPEDEESARPQVRGAIARNICHKPSNWRSAQSLPDYLKQHQIPGIFGIDTRALTRKIRM 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE- 186
G++ G +STE + L ++ + ++ G++L+ +V+ +EW + T W+FN
Sbjct: 129 YGAMNGGISTEILDEAELLEQVQAAPNMAGLNLVREVTTSTVYEWSDPTTAVWEFNPEGT 188
Query: 187 -RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
N ++ V+A DFG+K NILRRLASYGC++IVVP+ LK PDG+ SNGPGDP
Sbjct: 189 VNNGESLTVVALDFGVKRNILRRLASYGCRVIVVPADTSPEAILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SAV + K LL + P+FGICMGHQ+LG ALG
Sbjct: 249 SAVTEGITTAKVLLESEKPIFGICMGHQILGHALG 283
>gi|386287984|ref|ZP_10065150.1| carbamoyl-phosphate synthase small subunit [gamma proteobacterium
BDW918]
gi|385278963|gb|EIF42909.1| carbamoyl-phosphate synthase small subunit [gamma proteobacterium
BDW918]
Length = 379
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/281 (50%), Positives = 191/281 (67%), Gaps = 16/281 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGIAIGAEGHSVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEE+ + + AGLVIR L++ S++R ++L +YL RNI+GI D+DTR +TR LR
Sbjct: 65 VNSEDEEAAEIWSAGLVIRDLAMTASSFRSEQSLSDYLKARNIVGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G L +E+K+ L++++ + + G+DL +V+ E +EW ES+ W
Sbjct: 125 KGAQGGCLMAGDIDEAKA----LQLAKDFAGLKGMDLAKEVTTAESYEWRESS---WQLG 177
Query: 184 THERNSK----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
R+ Y V+AYDFG+K NILR LA GC++ VVP+ PA++ L +KPDGV S
Sbjct: 178 EGSRSMTDAELPYHVVAYDFGVKRNILRMLADRGCRLTVVPAKTPAADVLAMKPDGVFLS 237
Query: 240 NGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
NGPGDP YA+A +KE+L +PVFGIC+GHQLL A G
Sbjct: 238 NGPGDPEPCDYAIAAIKEILATALPVFGICLGHQLLALASG 278
>gi|359451123|ref|ZP_09240536.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20480]
gi|358043066|dbj|GAA76785.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20480]
Length = 378
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 185/279 (66%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANQIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + +Q+ L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGDELDEQKALQAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A+E L L PDG+ SNG
Sbjct: 181 FKTLDTADEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAAEVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKSFLETDTPIFGICLGHQLLALASG 279
>gi|359434168|ref|ZP_09224451.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20652]
gi|357919154|dbj|GAA60700.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20652]
Length = 378
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/279 (49%), Positives = 185/279 (66%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANQIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + + + L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGDELDENKALQAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ PA++ L L PDG+ SNG
Sbjct: 181 FKTLDAADEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTPAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKTFLETDTPIFGICLGHQLLALASG 279
>gi|336317274|ref|ZP_08572141.1| carbamoyl-phosphate synthase, small subunit [Rheinheimera sp. A13L]
gi|335878574|gb|EGM76506.1| carbamoyl-phosphate synthase, small subunit [Rheinheimera sp. A13L]
Length = 376
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/277 (49%), Positives = 188/277 (67%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGISVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + + GL+IR L + SN+R +L +YL+ RNI+GI D+DTR +TR LR
Sbjct: 64 GTNDEDEESDKIWAKGLIIRDLPLLASNFRNQASLSHYLSSRNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G L ++ + + LE++R++ + G+DL +VS KEP++W E + W
Sbjct: 124 EKGAQNGCLMAGDNLDESKALELARAFPGLSGMDLAKEVSVKEPYQWTEGS---WTLGQG 180
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ ++ + V+AYDFG+K NILR LA GC++ VVP+ A + L L PDG+ SNGPG
Sbjct: 181 FSKPDNSAFHVVAYDFGVKRNILRMLADRGCRLTVVPAQTSAEQVLALNPDGIFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+ YA+ ++ L +PVFGIC+GHQLL A G
Sbjct: 241 DPAPCDYAIKAIETFLTTNIPVFGICLGHQLLALASG 277
>gi|443321339|ref|ZP_21050395.1| carbamoyl-phosphate synthase, small subunit [Gloeocapsa sp. PCC
73106]
gi|442788957|gb|ELR98634.1| carbamoyl-phosphate synthase, small subunit [Gloeocapsa sp. PCC
73106]
Length = 379
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 188/276 (68%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ ++ SFG GT + EVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTFYQGFSFGHQGTTIAEVVFNTGITGYQEVLTDPSYQGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +DEES + G++ R+++ SNWR E+L +YL I GIY +DTR++TR++R
Sbjct: 69 INPEDEESSHPHVKGVICRNIARRPSNWRSTESLPDYLERYQIKGIYGLDTRSLTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +STE + D+ L + + + G++L+ +V+ KE +EW E T+ W+FN
Sbjct: 129 SGAMNGAISTEILEPDKLLPLVQSAPLMAGLNLVKEVTTKEIYEWSEGTESVWEFNETPE 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ V+A DFGIK NIL+RL YGC++IVVP + +E L+ KPDG+ SNGPGDP
Sbjct: 189 SSDSEPLTVVAIDFGIKRNILKRLVKYGCRVIVVPPSTSVAEILEYKPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
+AV V + K LL GK P FGICMGHQ+LG +LG
Sbjct: 249 AAVTEGVELTKALLKEGK-PTFGICMGHQILGLSLG 283
>gi|428317880|ref|YP_007115762.1| carbamoyl-phosphate synthase, small subunit [Oscillatoria
nigro-viridis PCC 7112]
gi|428241560|gb|AFZ07346.1| carbamoyl-phosphate synthase, small subunit [Oscillatoria
nigro-viridis PCC 7112]
Length = 385
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 142/277 (51%), Positives = 194/277 (70%), Gaps = 7/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA T VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTAYRGWSFGADATVVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES+ + G + R++ SNWRC+++L +YL + +I GIY +DTRA+TR++R
Sbjct: 69 VNLEDEESKGPQIRGAIARNVCSRPSNWRCSQSLQDYLKQYDIPGIYGIDTRALTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQ-ELLEMSR-SWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G++ G +ST + DQ ELLE+ + + + G++L+ +V+ +E +EW E+T W+F+
Sbjct: 129 VGAINGGIST--TILDQAELLELVQDAPSMDGLNLVREVTTREVYEWSEATDSVWEFSPT 186
Query: 186 ER--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + + V+A DFGIK NILRRLASYGC++IVVP+ E LK PDG+ SNGPG
Sbjct: 187 VKPASGQMWTVVALDFGIKRNILRRLASYGCRVIVVPADTSPEEILKYNPDGIFLSNGPG 246
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+AV +A K LL PVFGICMGHQ+LG +LG
Sbjct: 247 DPAAVTEGIATAKALLKSDKPVFGICMGHQILGLSLG 283
>gi|221134943|ref|ZP_03561246.1| carbamoyl-phosphate synthase, small subunit [Glaciecola sp.
HTCC2999]
Length = 377
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 187/275 (68%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ +FGA G VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAFGAEGFAVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D E+ Q F GLVIR L + SN+R +L +YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNAEDVEANQIFAKGLVIRDLPLIASNFRNESSLSDYLKANNILGIADIDTRRLTRVLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + E+ ++ + LE ++++ + G+DL +V+ KE EW +ST D +
Sbjct: 124 EKGAQNGCIVAGEALTEAQALEQAKAFGGLKGLDLAKEVTCKEVHEWNDSTWVLGDGYHN 183
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
++ + + V+AYDFG KHNILR L GC++ VVP+ A + L L PDGV SNGPGDP
Sbjct: 184 DQQNLPFHVVAYDFGAKHNILRMLVERGCRLTVVPAQTTAEDVLALSPDGVFLSNGPGDP 243
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA++ ++ LL + +P+FGIC+GHQLL A G
Sbjct: 244 EPCTYAISAIQTLLKQSIPMFGICLGHQLLALASG 278
>gi|407801035|ref|ZP_11147879.1| carbamoyl phosphate synthase small subunit [Alcanivorax sp. W11-5]
gi|407024472|gb|EKE36215.1| carbamoyl phosphate synthase small subunit [Alcanivorax sp. W11-5]
Length = 376
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 142/276 (51%), Positives = 184/276 (66%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R S GASG VGEVVFNT+LTGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGVSIGASGKTVGEVVFNTALTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + + AGLVIR L+ S+WR ++L YL NI+ I D+DTR +TR LR+
Sbjct: 65 TNAEDEESWKVWAAGLVIRDLAQTVSSWRAEQSLPEYLRANNIVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + ++ S+ + L +R++ + G+DL +VS KE + W E W
Sbjct: 125 KGAQNGCILAGDNISEDDALAAARAFPGLKGMDLAKEVSVKETYTWTEGV---WQLGAGH 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+E+ + V+AYDFG K NILR LA GC++ VVP+ PASE L +KPDGV SNGPGD
Sbjct: 182 NEQAEARFHVVAYDFGAKRNILRMLAERGCKLTVVPAQTPASEVLAMKPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ ++E++ +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIEAIREIVDTGLPVFGICLGHQLLALASG 277
>gi|119469581|ref|ZP_01612485.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Alteromonadales bacterium TW-7]
gi|392539359|ref|ZP_10286496.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas marina mano4]
gi|119447116|gb|EAW28386.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Alteromonadales bacterium TW-7]
Length = 378
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/279 (49%), Positives = 185/279 (66%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANQIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + +Q+ L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGDELDEQKALQAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLDTADEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKSFLETDTPIFGICLGHQLLALASG 279
>gi|39996375|ref|NP_952326.1| carbamoyl phosphate synthase small subunit [Geobacter
sulfurreducens PCA]
gi|409911810|ref|YP_006890275.1| carbamyl-phosphate synthase, small subunit [Geobacter
sulfurreducens KN400]
gi|39983255|gb|AAR34649.1| carbamyl-phosphate synthase, small subunit [Geobacter
sulfurreducens PCA]
gi|298505385|gb|ADI84108.1| carbamyl-phosphate synthase, small subunit [Geobacter
sulfurreducens KN400]
Length = 374
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 180/277 (64%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG ++ KSFGA+G VGEVVFNT++TGYQE+LTDPSY GQ V MT IGNT
Sbjct: 2 KAVLALADGRVFEGKSFGATGEAVGEVVFNTAMTGYQEVLTDPSYRGQMVTMTYTQIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES+Q +L+G +++ SNWR +L YL E ++GI +DTRA+TR LR
Sbjct: 62 GINPEDIESKQLYLSGFIVKEYHDCYSNWRATMSLDAYLKENGVVGIQGLDTRALTRHLR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ GV+ST +S + + + + G+DL + VS +P+ W E WD +
Sbjct: 122 DKGAQNGVISTVDSDHESLVKKARAVPSMAGLDLATGVSCDKPYHWTEKL---WDLEAGY 178
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y+V+AYDFGIK+NILR L S GC + VVP+T+PA E L + PDG+ SNGP
Sbjct: 179 TAATPDELKYKVVAYDFGIKYNILRCLVSAGCDVTVVPATFPADEALAMNPDGIFLSNGP 238
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + + +++ +GK P+FGIC+GHQLLG ALG
Sbjct: 239 GDPEPMTAVIENIRKFVGKKPIFGICLGHQLLGLALG 275
>gi|332706002|ref|ZP_08426075.1| carbamoyl-phosphate synthase small subunit [Moorea producens 3L]
gi|332355262|gb|EGJ34729.1| carbamoyl-phosphate synthase small subunit [Moorea producens 3L]
Length = 385
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ ++ SFGA+GT +GEVVFNT++TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTTYQGWSFGATGTTIGEVVFNTAMTGYQEVVTDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN D+ES + G + R++ SNWR ++L +YLAE NI GIY +DTRA+TR++R
Sbjct: 69 VNPSDQESAHPQIRGAIARNICYRPSNWRSTQSLPDYLAEHNIPGIYGIDTRALTRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--- 184
G++ G +STE S + L E+ + + G++L+ +VS + ++W + T+ +W+F
Sbjct: 129 IGAINGAISTEILDSAELLSEVQGAPSMAGLNLVKEVSTHKVYQWSDPTEANWEFGPGVD 188
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
K V+A DFGIK NIL+RLASY C++IVVP+ P E K PDG+ SNGPGD
Sbjct: 189 GVEKDKPLTVVAIDFGIKRNILKRLASYNCRVIVVPANTPPEEIAKYNPDGIFLSNGPGD 248
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P+ V ++ K LL + P+FGICMGHQ+LG ALG
Sbjct: 249 PAVVLEGISTTKALLERQQPIFGICMGHQILGLALG 284
>gi|434402641|ref|YP_007145526.1| carbamoyl-phosphate synthase small subunit [Cylindrospermum
stagnale PCC 7417]
gi|428256896|gb|AFZ22846.1| carbamoyl-phosphate synthase small subunit [Cylindrospermum
stagnale PCC 7417]
Length = 388
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 183/275 (66%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V+ T P +GNTG
Sbjct: 9 ALLVLADGTTYRGWSFGALGTAIGEVVFNTGMTGYQEVLTDPSYRGQIVIFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G + R++ SNWR ++L +YL +++I GIY +DTR +TR++R
Sbjct: 69 VNPEDEESSHPQVRGAIARNICHRPSNWRSTQSLPDYLKQQHIPGIYGIDTRNLTRKIRT 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE- 186
G++ G +ST + L ++ + ++ G++L+ +V+ +EW T P W+FN
Sbjct: 129 SGAMNGGISTAILDEAELLEQVQAAPNMAGLNLVREVTTSTAYEWSNPTIPAWEFNQEAG 188
Query: 187 -RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+++ V+A DFG+K NILRRLASYGC++IVVP+ P L PDG+ SNGPGDP
Sbjct: 189 VNIGESFTVVALDFGVKRNILRRLASYGCRVIVVPADTPPEAILNHNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
SAV + K LL P+FGICMGHQ+LG ALG
Sbjct: 249 SAVTEGIETAKALLLSDKPIFGICMGHQILGHALG 283
>gi|404496632|ref|YP_006720738.1| carbamoyl phosphate synthase small subunit [Geobacter
metallireducens GS-15]
gi|418066696|ref|ZP_12704055.1| carbamoyl-phosphate synthase, small subunit [Geobacter
metallireducens RCH3]
gi|78194235|gb|ABB32002.1| carbamyl-phosphate synthase, small subunit [Geobacter
metallireducens GS-15]
gi|373560009|gb|EHP86285.1| carbamoyl-phosphate synthase, small subunit [Geobacter
metallireducens RCH3]
Length = 374
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 180/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG I+ KSFGA+G GEVVFNT++TGYQE+LTDPSY GQ V MT +GNTG
Sbjct: 3 AVLALADGRIFEGKSFGATGEATGEVVFNTAMTGYQEVLTDPSYRGQMVTMTYTQMGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES+Q +L+G +++ SNWR +L YL E ++GI +DTRA+TR LR
Sbjct: 63 INPEDIESKQLYLSGFIVKEYHDCYSNWRATMSLDAYLKENGVVGIQGLDTRALTRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD----FN 183
G+ G++ST + + + + + G+DL S V+ +P+ W E WD +N
Sbjct: 123 KGAQNGIISTVDFDHESLVKKARAVPSMAGLDLASGVTCDKPYHWTEKL---WDLEAGYN 179
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
++ Y+V+AYDFGIK+NILR L S GC + VVP+T+PA E L + PDG+ SNGPG
Sbjct: 180 AAKQEDLKYKVVAYDFGIKYNILRCLVSAGCDVTVVPATFPAEEALAMNPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP + + +++ +GK P+FGIC+GHQLLG ALG
Sbjct: 240 DPEPMTTVIENIRKFVGKKPIFGICLGHQLLGLALG 275
>gi|407716715|ref|YP_006837995.1| carbamoyl-phosphate synthase small subunit [Cycloclasticus sp. P1]
gi|407257051|gb|AFT67492.1| Carbamoyl-phosphate synthase small chain [Cycloclasticus sp. P1]
Length = 377
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/278 (50%), Positives = 176/278 (63%), Gaps = 8/278 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVLEDGS++ +S G G GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 4 KAILVLEDGSVFHGQSIGVQGLTTGEVVFNTSMTGYQEILTDPSYSHQIVTLTYPHIGNV 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + GLVIR L + SNWR E+L YLA NI+ I D+DTR +TR LR
Sbjct: 64 GANAEDEESAAVHVQGLVIRDLPLLHSNWRSEESLSAYLARNNIVAIADIDTRRLTRILR 123
Query: 127 QDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G +++ EE L + G+DL VS K+P++W T P W
Sbjct: 124 EKGAQRGCIIAGEEVDEAHALASAKEVTPLKGLDLAQLVSCKKPYDW---TSPVWQLGQT 180
Query: 186 ERNS---KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ + Y+V+AYDFG+K NILR L GC++ VVP+ PASE L + PDGV SNGP
Sbjct: 181 SKTATKKANYKVVAYDFGVKRNILRLLVESGCEVCVVPAKTPASEVLAMSPDGVFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ +K +L KVPVFGIC+G+QLL A G
Sbjct: 241 GDPEPCDYAIEAIKTILKEKVPVFGICLGYQLLALASG 278
>gi|389793596|ref|ZP_10196758.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter fulvus
Jip2]
gi|388433708|gb|EIL90670.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter fulvus
Jip2]
Length = 375
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 181/274 (66%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + G +G VGEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 5 ALLALEDGSLFHGHAAGTNGETVGEVVFNTAMTGYQEILTDPSYARQMVTLTYPHVGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ESR+ AGL++R + SNWRC E+L +YL +++ I +DTR +TR LR
Sbjct: 65 VNAEDAESRKVQAAGLIVRDVPRRASNWRCTESLSDYLKRHDVVAIAGIDTRRLTRILRV 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G + E + L +R + + G+DL VS +E + W E D D
Sbjct: 125 KGALSGCIVAGEQIDAEAALASARGFAGLNGMDLAKVVSTRESYVWNEGIY-DLDRTAFN 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ +K ++V+AYDFG K NILR LA GC++ VVP+ PA++ L +KPDGV SNGPGDP+
Sbjct: 184 QPAKRFKVVAYDFGTKLNILRLLAEQGCEVTVVPAQTPAADVLAMKPDGVFLSNGPGDPA 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
A YA+ + L K+P+FGIC+GHQL+G ALG
Sbjct: 244 ACDYAIEATRTFLEAKIPLFGICLGHQLMGLALG 277
>gi|332288949|ref|YP_004419801.1| carbamoyl phosphate synthase small subunit [Gallibacterium anatis
UMN179]
gi|330431845|gb|AEC16904.1| carbamoyl phosphate synthase small subunit [Gallibacterium anatis
UMN179]
Length = 385
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/277 (49%), Positives = 181/277 (65%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DGS++R K+ GA G +GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNT
Sbjct: 4 QAILVLADGSVFRGKAIGALGHTIGEVVFNTSMTGYQEILTDPSYTKQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + AGL+IR L + SN+R +L YL + N++ I D+DTR +TR LR
Sbjct: 64 GANSEDVESDAVYAAGLIIRDLPLLHSNFRSEMSLQQYLQQNNVVAIADIDTRRLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
G++ G + E Q+ LE+++S+ + G DL +V+ K +EW E W
Sbjct: 124 DKGAMPGCIMAGEI-DQQKALELAQSFGSMAGKDLAKEVTCKNSYEWTERV---WQLGLG 179
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
++ + ++AYDFG+K NILR LA GC I VVP+T PASE L L PDG+ SNGPG
Sbjct: 180 YPQQQHCRFHIVAYDFGVKRNILRMLAERGCHITVVPATTPASEVLALNPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ +++LL K P+FGIC+GHQLLG A+G
Sbjct: 240 DPEPCEYAITAIRQLLESKKPIFGICLGHQLLGLAVG 276
>gi|359438336|ref|ZP_09228366.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20311]
gi|359444020|ref|ZP_09233824.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20439]
gi|392554493|ref|ZP_10301630.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas undina NCIMB 2128]
gi|358026960|dbj|GAA64615.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20311]
gi|358041969|dbj|GAA70073.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20439]
Length = 378
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 184/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEASHIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + +++ LE ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIVAGDELDEKKALEAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLHADDEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKTFLETDTPIFGICLGHQLLALASG 279
>gi|404493235|ref|YP_006717341.1| carbamoyl phosphate synthase small subunit [Pelobacter carbinolicus
DSM 2380]
gi|123574147|sp|Q3A450.1|CARA_PELCD RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|77545295|gb|ABA88857.1| carbamyl-phosphate synthase, small subunit [Pelobacter carbinolicus
DSM 2380]
Length = 376
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 180/275 (65%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG ++ K+FGA G GEVVFNTS+TGYQEILTDPSY G+ V MT P IGN G
Sbjct: 3 AILALADGRVFTGKAFGARGEVTGEVVFNTSMTGYQEILTDPSYCGEIVTMTYPLIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES + L+G +++ SNWR TL +YL + I+GI +DTRA+ R +R
Sbjct: 63 INPEDVESGRPHLSGFIVKEACPYPSNWRSTTTLDDYLKQNQIVGIQGIDTRALVRHIRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN---T 184
+G+ G++S+ + + + + ++ IVG DL+ +V+ KEP+ W E WD +
Sbjct: 123 NGAQTGIISSIDLDPESLVEKARKAPSIVGRDLVKEVTCKEPYHWTEGP---WDLSEGYQ 179
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y+V+AYDFGIK NILR L + GC + VVP+T PA + + + PDGV SNGPGD
Sbjct: 180 QQTGEPRYKVVAYDFGIKRNILRNLVAIGCDVTVVPATTPAQDVMAMNPDGVFLSNGPGD 239
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P + YA +++LLGK+P+FGIC+GHQLL ALG
Sbjct: 240 PEPIQYAQENIRQLLGKMPIFGICLGHQLLALALG 274
>gi|372269112|ref|ZP_09505160.1| carbamoyl-phosphate synthase, small subunit [Alteromonas sp. S89]
Length = 379
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/277 (49%), Positives = 186/277 (67%), Gaps = 8/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R ++ GA G+ VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 8 AMLVLADGSVFRGRAIGAEGSTVGEVVFNTSMTGYQEILTDPSYARQIVTLTYPHIGNTG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE + + AGLVIR L + S++R ++L +YL RNI+GI D+DTR +TR LR
Sbjct: 68 TNSEDEECAEIWSAGLVIRDLPLLASSFRNEQSLEDYLKARNIVGIADIDTRRLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + E + E L+ ++ + + G+DL VS KE +++ E T W+
Sbjct: 128 KGAQSGCIIAGEGVDEAEALKKAQEFAGLKGMDLAKVVSTKEQYDFNEGT---WELGQGH 184
Query: 187 R---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ ++ Y+V+AYDFG+K NILR L GC I VVP+ PASE L + PDGV SNGPG
Sbjct: 185 KPAPAAQPYKVVAYDFGVKRNILRMLVDRGCSITVVPAETPASEVLAMNPDGVFLSNGPG 244
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ ++E+L +P +GIC+GHQLLG A+G
Sbjct: 245 DPEPCDYAIKAIQEILDASLPTYGICLGHQLLGLAVG 281
>gi|359442337|ref|ZP_09232206.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20429]
gi|392533581|ref|ZP_10280718.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas arctica A 37-1-2]
gi|414069498|ref|ZP_11405491.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
Bsw20308]
gi|358035791|dbj|GAA68455.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20429]
gi|410808006|gb|EKS13979.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
Bsw20308]
Length = 378
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 184/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANQIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + + + L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGDELDENKALQAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLDAADEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKTFLETDTPIFGICLGHQLLALASG 279
>gi|254413787|ref|ZP_05027556.1| carbamoyl-phosphate synthase, small subunit [Coleofasciculus
chthonoplastes PCC 7420]
gi|196179384|gb|EDX74379.1| carbamoyl-phosphate synthase, small subunit [Coleofasciculus
chthonoplastes PCC 7420]
Length = 382
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 185/275 (67%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGASGT +GEVVFNT++TGYQE+ TDPSY GQ V T P +GNTG
Sbjct: 9 ALLVLADGTSYPGWSFGASGTAIGEVVFNTAMTGYQEVATDPSYCGQIVTFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + G + R++ SNWR ++ +YL E I GIY +DTRA+TR+LR
Sbjct: 69 VNPEDEESTHPQIRGAIARNICWRPSNWRSTQSFPDYLKEHKIPGIYGIDTRALTRKLRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE D+ L ++ + ++ G++L+ +V+ K +EW E+T W+F
Sbjct: 129 TGAMNGGISTEILDPDELLEQVQAAPNMAGLNLVQEVTTKAVYEWSETTDNHWEFRPSAE 188
Query: 188 NS--KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
++ + V+A DFGIK NILRRLASYGC++IVVP+ + LK PDG+ SNGPGDP
Sbjct: 189 SAAGEPLTVVAIDFGIKRNILRRLASYGCRVIVVPADTSPEDILKYNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+AV + K LL + P+FGICMGHQ+LG ++G
Sbjct: 249 AAVRDGIETTKALLAQEKPLFGICMGHQILGLSMG 283
>gi|220907357|ref|YP_002482668.1| carbamoyl phosphate synthase small subunit [Cyanothece sp. PCC
7425]
gi|219863968|gb|ACL44307.1| carbamoyl-phosphate synthase, small subunit [Cyanothece sp. PCC
7425]
Length = 389
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 184/275 (66%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++ SFGA GT VGEVVFNT +TGYQE+LTDPSY GQ + T P +GNTG
Sbjct: 9 ALLVLADGTVFSGWSFGAPGTVVGEVVFNTGMTGYQEVLTDPSYCGQIITFTYPELGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + G + R++ SNWR ++L +YL + + GIY +DTRA+TR++R
Sbjct: 69 VNPEDEESARPQVRGAIARNICWQPSNWRSTQSLPDYLKQHGVPGIYGIDTRALTRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF--NTH 185
+G++ G +STE + L + + + G++L V+ E +EW E T W+F +
Sbjct: 129 EGAMNGAISTEILDPLKLLQRVQAAPTMQGLNLTRQVTTSEIYEWSEPTDQVWEFMPQST 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ V+A DFGIK NILRRLASYGC++IVVPS A+E LK PDG+ SNGPGDP
Sbjct: 189 TQTEDPLVVVAIDFGIKRNILRRLASYGCRVIVVPSNTSAAEILKFNPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+AV +A K LL + P+FGIC+GHQLLG +LG
Sbjct: 249 AAVTEGIATAKTLLQTQKPMFGICLGHQLLGLSLG 283
>gi|443318249|ref|ZP_21047510.1| carbamoyl-phosphate synthase, small subunit [Leptolyngbya sp. PCC
6406]
gi|442782149|gb|ELR92228.1| carbamoyl-phosphate synthase, small subunit [Leptolyngbya sp. PCC
6406]
Length = 399
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 184/274 (67%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS +R SFGA+GT +GEVVFNT +TGYQE+LTDPSY GQ + T P +GNTG
Sbjct: 10 ALLVLADGSSFRGWSFGAAGTTMGEVVFNTGMTGYQEVLTDPSYCGQILTFTYPELGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DEES + + G + R++ SNWR +TL YL + +I GIY +DTRA+TR+LR
Sbjct: 70 VNPQDEESSRPQVLGAIARNICPQPSNWRTTQTLPEYLKQHHIPGIYGIDTRALTRKLRS 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD-FNTHE 186
G++ G +STE ++ L ++ + + G++L+ V+ + +EW E T+ W+ F E
Sbjct: 130 SGAMNGAISTEVLDPEELLRQLQDAPTMEGLNLVDAVTTESAYEWEEPTETAWEFFPDSE 189
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
N + V+A DFGIK NILRRL YGC++IVVP+T L +PDG+ SNGPGDP+
Sbjct: 190 DNGERLTVVAMDFGIKRNILRRLTRYGCRVIVVPATTEPEAILAYQPDGLFLSNGPGDPA 249
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV A V+ LL ++P FGICMGHQ+LG +LG
Sbjct: 250 AVATARRTVQALLEQQLPTFGICMGHQILGLSLG 283
>gi|359453074|ref|ZP_09242400.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20495]
gi|358049882|dbj|GAA78649.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas sp.
BSi20495]
Length = 378
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 184/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANQIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + + + L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIVAGDELDENKALQAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLDAADEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++ L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIEAIQAFLETDTPIFGICLGHQLLALASG 279
>gi|347755709|ref|YP_004863273.1| carbamoyl-phosphate synthase small subunit [Candidatus
Chloracidobacterium thermophilum B]
gi|347588227|gb|AEP12757.1| carbamoyl-phosphate synthase small subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 373
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 181/273 (66%), Gaps = 4/273 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L LEDG ++ +S GA+G GEVVFNT++TGYQE+LTDPSYAGQ V MT PHIGN
Sbjct: 2 EAILALEDGRLFYGRSIGAAGETTGEVVFNTAMTGYQEVLTDPSYAGQLVTMTCPHIGNY 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D ESRQ F+AG ++R LS SNWR E+LG+YL I+GI +DTRA+ R +R
Sbjct: 62 GVNPEDVESRQPFVAGFIVRELSSVVSNWRATESLGHYLKRHGIVGIEGIDTRALVRHIR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G++ GV+ST E ++ + + + + + +VG L V+ P+ W + D + E
Sbjct: 122 ERGAMRGVISTVEREASRLVAKAAGAPGMVGAALAKTVTCTAPYTWPLAAAED----STE 177
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+AYDFG+K NILR LA+ GC+I VVP+T + E L+L+PDGV SNGPGDP
Sbjct: 178 YQRRRWHVVAYDFGVKFNILRHLAALGCRITVVPATTTSEEVLRLQPDGVFLSNGPGDPE 237
Query: 247 AVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+ V+ L ++P FGIC+GHQ+L A G
Sbjct: 238 PLADIAREVRLLAERLPTFGICLGHQVLALAFG 270
>gi|442611483|ref|ZP_21026189.1| Carbamoyl-phosphate synthase small chain [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441747411|emb|CCQ12251.1| Carbamoyl-phosphate synthase small chain [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 378
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 183/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGISVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + + GLVIR L + SN+R ++L YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEAGKIWAKGLVIRDLPLLASNFRNEQSLSEYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + + + L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGDDVCETKALDAAKAFPGLKGMDLAKVVSAKESFEWRESS---WSLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A+E L L PDG+ SNG
Sbjct: 181 FKTLKPEEERFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAAEVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKTFLETDTPIFGICLGHQLLALASG 279
>gi|332534011|ref|ZP_08409862.1| carbamoyl-phosphate synthase small chain [Pseudoalteromonas
haloplanktis ANT/505]
gi|332036560|gb|EGI73027.1| carbamoyl-phosphate synthase small chain [Pseudoalteromonas
haloplanktis ANT/505]
Length = 378
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 184/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANQIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + + + L+ ++++ + G+DL VS KE FEW ES+ W
Sbjct: 124 DKGAQNGCIVAGDELDENKALQAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLDAADEKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++ L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIEAIQAFLETDTPIFGICLGHQLLALASG 279
>gi|428203163|ref|YP_007081752.1| carbamoyl-phosphate synthase small subunit [Pleurocapsa sp. PCC
7327]
gi|427980595|gb|AFY78195.1| carbamoyl-phosphate synthase, small subunit [Pleurocapsa sp. PCC
7327]
Length = 385
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 184/275 (66%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R SFGA+GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GN G
Sbjct: 9 ALLVLADGTSYRGWSFGATGTAVGEVVFNTGMTGYQEVLTDPSYCGQLVTFTYPELGNVG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + + ++ R+++ SNWR ++L +YL E +I GIY VDTRAITR++R
Sbjct: 69 VNPEDEESNRPHVKAVIARNITYRPSNWRATKSLPDYLVEYDIPGIYGVDTRAITRKIRS 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--TH 185
G++ G +S+E L ++ + + G++L+ +V+ +E +EW T P W+F
Sbjct: 129 VGAMNGSVSSEILDPQTLLRQVQAAPSMAGLNLVKEVTTREVYEWTNPTAPYWEFRPLNG 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + +T V+A DFGIK NILRRLASYGC++IVVP+ LK PDG+ SNGPGDP
Sbjct: 189 DGDRETLTVVAIDFGIKRNILRRLASYGCRVIVVPADTTVEAILKYHPDGIFLSNGPGDP 248
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
+A + + LL +P FGICMGHQ+LG +LG
Sbjct: 249 AANAEGIETTRALLELGMPTFGICMGHQILGLSLG 283
>gi|52426292|ref|YP_089429.1| carbamoyl phosphate synthase small subunit [Mannheimia
succiniciproducens MBEL55E]
gi|52308344|gb|AAU38844.1| CarA protein [Mannheimia succiniciproducens MBEL55E]
Length = 375
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 186/276 (67%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGSI+R S GA+G +GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSIFRGTSIGAAGHTIGEVVFNTSMTGYQEILTDPSYFKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES + AGL+IR L + SN+R ++L +YL + N++ I D+DTR +TR LR
Sbjct: 65 TNSEDLESNGVYAAGLIIRDLPMIHSNFRANQSLSDYLKDNNVVAIADIDTRRLTRLLRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G++ G + + E +Q+ LE++ S+ + G DL +V+ ++ + W T+ +W
Sbjct: 125 KGAMAGCIMSGEV-DEQKALELALSFGSMAGKDLAQEVTAQQSYRW---TQGEWVLGKGY 180
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + ++ V+AYDFG+KHNILR LA GC++ VVP+ A E L L PDG+ SNGPGD
Sbjct: 181 AEQQNASFNVVAYDFGVKHNILRMLAERGCKLTVVPAKTSAEEVLALNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ ++ LL K P+FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISAIQTLLATKKPIFGICLGHQLLGLASG 276
>gi|254491836|ref|ZP_05105015.1| carbamoyl-phosphate synthase, small subunit [Methylophaga
thiooxidans DMS010]
gi|224463314|gb|EEF79584.1| carbamoyl-phosphate synthase, small subunit [Methylophaga
thiooxydans DMS010]
Length = 376
Score = 269 bits (688), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 181/276 (65%), Gaps = 6/276 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDG+++ +S GA G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGN
Sbjct: 4 SALLALEDGTVYHGESIGAVGQSVGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNV 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + F++GL+IR LS SNWR E+L YL N++G+ +DTRA+TRRLR
Sbjct: 64 GVNAEDEESDKPFVSGLIIRDLSPVVSNWRSEESLDTYLVRHNVVGLAGIDTRALTRRLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G++ G + E+ + +E ++++D + G+DL VS KE + W W N
Sbjct: 124 EKGAMKGCIVAGENIDVKAAIEAAQNFDGLKGMDLAKVVSTKETYSWETGC---WHLNGE 180
Query: 186 ERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + + V+AYDFG K NILR L GC++ VVP+ A E L + PDG+ SNGPGD
Sbjct: 181 SQAQEPRFHVVAYDFGAKKNILRMLVERGCKLTVVPAQTSAEEVLAMNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ ++ L K +PVFGIC+GHQLLG A G
Sbjct: 241 PEPCDYAIKAIQTFLEKELPVFGICLGHQLLGLACG 276
>gi|302879462|ref|YP_003848026.1| carbamoyl-phosphate synthase small subunit [Gallionella
capsiferriformans ES-2]
gi|302582251|gb|ADL56262.1| carbamoyl-phosphate synthase, small subunit [Gallionella
capsiferriformans ES-2]
Length = 375
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 184/276 (66%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R S GASG++ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 7 AILVLADGTVFRGVSIGASGSRSGEVVFNTSMTGYQEILTDPSYCRQIVTLTCPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ESRQ F +GLVIR LS+ SNWRC ++L YL +++ I +DTR +TR LR+
Sbjct: 67 INDEDVESRQVFASGLVIRDLSLTVSNWRCTQSLPEYLKANDVVAIAGIDTRKLTRILRE 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G +++ + L +R + + G+DL V+ P+EW + +WD
Sbjct: 127 KGAQSGCIAS--GTDEVAALAAARGFAGLAGMDLAQVVTCDTPYEW---NQGEWDLAAGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E S + V+AYDFG+K NILR LA+ GC+I VVP+ PA+ L +KPDG+ SNGPGD
Sbjct: 182 SEAGSPEFHVVAYDFGVKRNILRMLAARGCKITVVPAKTPAATVLAMKPDGIFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A + +L VP+FGIC+GHQ+LG A+G
Sbjct: 242 PEPCDYAIAATQSVLAAGVPLFGICLGHQILGLAVG 277
>gi|409203803|ref|ZP_11232006.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas flavipulchra JG1]
Length = 378
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 183/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEADKIWAKGLVIRDLPLLASNFRNEQSLSDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + E +Q+ LE ++++ + G+DL V+ + FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGEEVDEQKALEAAQAFPGLKGMDLAKVVTTESQFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLAAEEEKFHVVAYDFGVKKNILRMLVDRGCKLTVVPAETSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIEAIKAFLETDTPIFGICLGHQLLALASG 279
>gi|386814628|ref|ZP_10101846.1| carbamoyl-phosphate synthase small subunit [Thiothrix nivea DSM
5205]
gi|386419204|gb|EIJ33039.1| carbamoyl-phosphate synthase small subunit [Thiothrix nivea DSM
5205]
Length = 379
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 184/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R +S G G GEVVFNT+LTGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 5 ALLVLEDGSVFRGRSIGCDGQTTGEVVFNTALTGYQEILTDPSYSRQIVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES Q AGL++R + S+WR ++L +YLA NI+ I D+DTR +TR LR+
Sbjct: 65 VNPEDTESTQVHAAGLIVRDVPAVYSSWRAQKSLPDYLARNNIVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + E+ ++ L+ +RS+ + G+DL +V+ EP+ W + + W + +
Sbjct: 125 KGAQRGCIVAGENLNEAVALDAARSFPGLKGMDLAKEVTVAEPYVWTQGS---WQLDPNT 181
Query: 187 RNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ T + VIAYD+G+K NILR L GC++ VVP+ PASE L + PDGV SNG
Sbjct: 182 PRASTEVSAEFNVIAYDYGVKTNILRMLVDRGCRVTVVPAQTPASEVLAMNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L KVP FGIC+GHQLLG A G
Sbjct: 242 PGDPEPCDYAITAIQEVLEKKVPTFGICLGHQLLGLASG 280
>gi|394989173|ref|ZP_10382007.1| carbamoyl-phosphate synthase small subunit [Sulfuricella
denitrificans skB26]
gi|393791592|dbj|GAB71646.1| carbamoyl-phosphate synthase small subunit [Sulfuricella
denitrificans skB26]
Length = 376
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/279 (49%), Positives = 183/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R S GA+G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 7 AILALADGTIFRGISIGATGHSVGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES Q AGLVIR L I +SNWR +E LG YL +N++ I D+DTR +TR LR+
Sbjct: 67 TNSEDAESAQIHAAGLVIRDLPIQSSNWRSSEDLGAYLQRQNVVAIADIDTRKLTRLLRE 126
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G L +E+K+ +E++R + + G+DL VS +P+ W E +W
Sbjct: 127 KGAQSGCLMAGDIDEAKA----IELARGFPGLAGMDLAKVVSCSQPYVWQEG---EWKLG 179
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++ + V+AYD+G+K NILR LA GC++ V+P+ P E KLKPDGV SNG
Sbjct: 180 NGFTPLDNPRFHVVAYDYGVKRNILRMLAQRGCKVTVLPAQTPVEEVFKLKPDGVFLSNG 239
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+LG+ +P FGIC+GHQLL A G
Sbjct: 240 PGDPEPCDYAINAIKEVLGQGIPTFGICLGHQLLALASG 278
>gi|334705417|ref|ZP_08521283.1| carbamoyl phosphate synthase small subunit [Aeromonas caviae Ae398]
Length = 378
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 178/278 (64%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L +YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQVHAQGLIIRDLPILASNFRNQQSLSDYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + LE +R++ + G+DL +V+ E + W E + W
Sbjct: 125 KGAQAGCILAGKQLDEAHALEQARAFPGLKGMDLAKEVTVSESYSWTEGS---WQLGKGH 181
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L + PDG+ SNGP
Sbjct: 182 VTPAADELKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLAMNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ +K L PVFGIC+GHQLLG A G
Sbjct: 242 GDPEPCDYAIEAIKAFLDTSTPVFGICLGHQLLGLASG 279
>gi|88799654|ref|ZP_01115229.1| carbamoyl-phosphate synthase small subunit [Reinekea blandensis
MED297]
gi|88777548|gb|EAR08748.1| carbamoyl-phosphate synthase small subunit [Reinekea sp. MED297]
Length = 376
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 186/274 (67%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFKGIGIGAVGETVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + AGLVIR L + SN+R ++L +YL RN++ I D+DTR +TR LR+
Sbjct: 65 VTAEDEESDNVWAAGLVIRDLPLLESNFRSEQSLADYLKSRNVVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T ++ + L ++++ + G+DL +V+ KE +EW E + + +T
Sbjct: 125 KGAQNGCIITGDAIDEAHALTQAKAFAGLKGMDLAKEVTVKEAYEWTEGSWALGEGHTQP 184
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
S+ + V+AYD+G+K NILR LA GC++ VVP+ PAS+ L + PDGV SNGPGDP
Sbjct: 185 DTSR-FHVVAYDYGVKRNILRMLADRGCRLTVVPAQTPASDVLAMNPDGVFLSNGPGDPE 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ ++E+L +PVFGIC+GHQLLG A G
Sbjct: 244 PCDYAINAIQEILTTDIPVFGICLGHQLLGLASG 277
>gi|392311309|ref|ZP_10273843.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas citrea NCIMB 1889]
Length = 378
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 184/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGLSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ Q + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEADQIWAKGLVIRDLPLLASNFRNEQSLSDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + +S +Q+ LE ++++ + G+DL V KE + W +S+ W
Sbjct: 124 DKGAQNGCIIAGDSLDEQQALEAAKAFPGLKGMDLAKVVCTKEQYTWADSS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ T + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 YRTLAAEEEKFHVVAYDFGVKKNILRMLVDRGCKLTVVPAETSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L + P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKTFLETETPIFGICLGHQLLALASG 279
>gi|428221293|ref|YP_007105463.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp. PCC
7502]
gi|427994633|gb|AFY73328.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. PCC
7502]
Length = 385
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 185/278 (66%), Gaps = 2/278 (0%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N +A LVL DGSI++ +FGA+GT +GEVVFNT +TGYQE+LTDPSYAGQ V T P +
Sbjct: 2 NKQSAILVLADGSIYKGFAFGATGTAIGEVVFNTGMTGYQEVLTDPSYAGQIVTFTYPEL 61
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GNTG+N DDEES + G + R+++ SNWR ++L +YL +++ I +DTRA+TR
Sbjct: 62 GNTGINLDDEESDHPQVKGAIARNITYTPSNWRSRQSLHDYLKAHDVVAIGGIDTRALTR 121
Query: 124 RLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF- 182
+LR G++ G +STE + L ++ + + G++L V+ +EW E+T W+F
Sbjct: 122 KLRSLGAMNGGISTEILDPEILLAQVKAAPSMQGLNLAQTVTTPRIYEWKEATPTAWEFI 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ + V+A DFG+K NILRRL SYGC++IVVP+ P + L+ PDG+ SNGP
Sbjct: 182 EPSDPLTAPLTVVAIDFGVKRNILRRLVSYGCRVIVVPADTPVEKILEFNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDPSAV + K LLG P+FGIC+GHQ+LG +LG
Sbjct: 242 GDPSAVTGGIETAKALLGLNKPIFGICLGHQILGLSLG 279
>gi|333906697|ref|YP_004480283.1| carbamoyl-phosphate synthase small subunit [Marinomonas posidonica
IVIA-Po-181]
gi|333476703|gb|AEF53364.1| carbamoyl-phosphate synthase, small subunit [Marinomonas posidonica
IVIA-Po-181]
Length = 376
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/277 (50%), Positives = 190/277 (68%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDG+I++ S GA G+ EVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SAILALEDGTIFKGVSIGADGSSTAEVVFNTSMTGYQEILTDPSYARQMVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES Q + +GL+IR L + S+WR ETL +YL + ++GI D+DTR +TR LR
Sbjct: 64 GVNSEDEESNQVWCSGLIIRDLPLLASSWRKEETLSDYLTRKGVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF-NT 184
+ G+ G + +S +++E + +R++ + G+DL +V+ +E +EW EST WD
Sbjct: 124 EKGAQAGCIIAGDSINEEEAIAAARAFPGLKGMDLAKEVTVQETYEWTEST---WDLVEG 180
Query: 185 HER-NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
H S + V+AYDFG+K NILR L GC++ VVP+ PAS+ L L PDGV SNGPG
Sbjct: 181 HTTPESSEFHVVAYDFGVKRNILRMLVERGCRLTVVPAKTPASDVLALNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAIQAIKDILETELPVFGICLGHQLLALASG 277
>gi|399546390|ref|YP_006559698.1| carbamoyl-phosphate synthase small subunit [Marinobacter sp.
BSs20148]
gi|399161722|gb|AFP32285.1| Carbamoyl-phosphate synthase small chain [Marinobacter sp.
BSs20148]
Length = 381
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 182/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + GA G GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 10 AILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYARQLVTLTYPHIGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + A L+IR L + SNWR ++L YL + NI+GI D+DTR +TR LR
Sbjct: 70 VNPEDVESDRIHAAALIIRDLPLAASNWRSTQSLDGYLRDNNIVGIADIDTRRLTRILRD 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + ES + + LE+++ + + G+DL +VS K W E+ +WD
Sbjct: 130 KGSQSGAVVAGESATAERALELAKVFPGLKGMDLAKEVSSKSVSHWTET---EWDLVNGY 186
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+++S ++++AYD+GIK NILR LAS GC I VVP+ PA+E L + PDGV SNGPGD
Sbjct: 187 GQQDSPHFKIVAYDYGIKLNILRMLASRGCDITVVPAQTPAAEVLAMNPDGVFLSNGPGD 246
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 247 PEPCDYAIKAIQDILEADLPVFGICLGHQLLALASG 282
>gi|451981958|ref|ZP_21930294.1| Carbamoyl-phosphate synthase, small subunit [Nitrospina gracilis
3/211]
gi|451760799|emb|CCQ91570.1| Carbamoyl-phosphate synthase, small subunit [Nitrospina gracilis
3/211]
Length = 375
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/278 (48%), Positives = 183/278 (65%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I+R + FGA EVVFNTS+ GYQE+LTDPSY GQ V+MT P IGN G
Sbjct: 3 AILALEDGRIFRGRMFGAEKEVTAEVVFNTSMAGYQEVLTDPSYCGQMVVMTYPLIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES + +L+ +I+ LS SNWR ETL +L ++G+ +DTRA+TR +R+
Sbjct: 63 INPEDYESDRPYLSAFIIKELSGIPSNWRSTETLDAFLKRHGVVGLQGLDTRALTRHIRE 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD----FN 183
G+ V+S+ S + + + +VG DL+ +V+ ++P+ W E DWD +
Sbjct: 123 KGAQRAVISSNGSNPAALVEKAKEAPQMVGRDLVKEVTCEQPYIWEEG---DWDLRKGYT 179
Query: 184 THERN--SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
ER +K Y V+A D GIK+NILR+L GC++ VVP+T A E LK KPDGV SNG
Sbjct: 180 RFERRAGAKPYFVVALDLGIKYNILRQLTQSGCRVTVVPATTTAEEILKFKPDGVFLSNG 239
Query: 242 PGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+AV YA+ V+ L+GKVP+FGIC+GHQ+L ALG
Sbjct: 240 PGDPAAVTYAIDTVRSLIGKVPIFGICLGHQILNLALG 277
>gi|423202128|ref|ZP_17188707.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AER39]
gi|423207337|ref|ZP_17193893.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AMC34]
gi|423210196|ref|ZP_17196750.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AER397]
gi|404615280|gb|EKB12252.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AER39]
gi|404616084|gb|EKB13042.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AER397]
gi|404620404|gb|EKB17301.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AMC34]
Length = 378
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 178/278 (64%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQIHAQGLIIRDLPILASNFRNQQSLSEYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + LE +R++ + G+DL +V+ E + W E + W
Sbjct: 125 KGAQAGCILAGKQVDEAYALEQARAFPGLKGMDLAKEVTVGEAYNWTEGS---WQLGKGH 181
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L + PDG+ SNGP
Sbjct: 182 VTPDADQLKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLAMNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ +K L PVFGIC+GHQLLG A G
Sbjct: 242 GDPEPCDYAIEAIKAFLNTNTPVFGICLGHQLLGLASG 279
>gi|392543979|ref|ZP_10291116.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas piscicida JCM 20779]
Length = 378
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 183/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + + GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEADKIWAKGLVIRDLPLLASNFRNEQSLSDYLKERNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + +Q+ LE ++++ + G+DL V+ + FEW ES+ W
Sbjct: 124 DKGAQNGCIIAGDEVDEQKALEAAQAFPGLKGMDLAKVVTTESQFEWRESS---WTLGEG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNG
Sbjct: 181 FKTLSAEEEKFHVVAYDFGVKKNILRMLVDRGCKLTVVPAETSAADVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIEAIKAFLETDTPIFGICLGHQLLALASG 279
>gi|254516629|ref|ZP_05128688.1| carbamoyl-phosphate synthase, small subunit [gamma proteobacterium
NOR5-3]
gi|219675052|gb|EED31419.1| carbamoyl-phosphate synthase, small subunit [gamma proteobacterium
NOR5-3]
Length = 386
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 179/275 (65%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++ S GA+ T VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILVLEDGSVFHGISIGAAATSVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q + +GLVIR L + SN+R + L +YL ER ++GI ++DTR +TR LR
Sbjct: 73 TNAEDEESSQIWASGLVIRDLPLLASNFRNTQALDDYLKERGVVGIAEIDTRRLTRVLRD 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G L ES L ++R + + G+DL +V+ E + W T + F+
Sbjct: 133 KGAQNGCLMATESPDTDAALALAREFAGLKGMDLAKEVTTSERYTWTAGTWQLGQGFSDP 192
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ V+AYDFG+K NILR LA GC++ VVP+ PASE L L PDGV SNGPGDP
Sbjct: 193 AAQEMPWHVVAYDFGVKRNILRMLADRGCRLTVVPAKTPASEVLALNPDGVFLSNGPGDP 252
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ + ELL +P+FGIC+GHQLL A G
Sbjct: 253 EPCDYAITAITELLETGIPLFGICLGHQLLALASG 287
>gi|417957242|ref|ZP_12600167.1| carbamoyl-phosphate synthase, small subunit [Neisseria weaveri ATCC
51223]
gi|343968646|gb|EGV36871.1| carbamoyl-phosphate synthase, small subunit [Neisseria weaveri ATCC
51223]
Length = 376
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 180/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGSI+ S G GT GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSIFHGTSVGYQGTTSGEVVFNTSITGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR + AGL+IR L + SN+R +E+L YL + I D+DTR +TR LR
Sbjct: 65 ANSEDAESRSVYAAGLIIRDLPLLHSNFRSSESLQEYLVRNQTVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
G+ G + T ++++ E+ ++ +VG DL +V+ E +EW E +W
Sbjct: 125 KGAQAGAILTGADATEEKARELIAAFGSMVGKDLAKEVTCSESYEWTEG---EWKLGKGF 181
Query: 186 ERNS-KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
ER S + + V+AYDFG+K NILR LA GC++ VVP+ PA + L + PDGV SNGPGD
Sbjct: 182 ERPSEQPFHVVAYDFGVKTNILRMLAERGCRLTVVPAQTPAKDVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+A VKELL K P+FGIC+GHQLLG A+G
Sbjct: 242 PEPCDYAIAAVKELLESKKPLFGICLGHQLLGLAVG 277
>gi|53803858|ref|YP_114290.1| carbamoyl phosphate synthase small subunit [Methylococcus
capsulatus str. Bath]
gi|53757619|gb|AAU91910.1| carbamoyl-phosphate synthase, small subunit [Methylococcus
capsulatus str. Bath]
Length = 378
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 177/276 (64%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L+DG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 ALLALDDGTVFRGYAIGAEGASVGEVVFNTSITGYQEILTDPSYARQIVALTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES F +GLVIR L + SNWRC L YL +R ++GI +DTR +TR LR
Sbjct: 65 INEEDTESTGIFASGLVIRDLPLRASNWRCERRLDEYLRQRGVVGIAGLDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G ++ + M+R + + G+DL V+ + +EW E + W F
Sbjct: 125 KGAQRGCIAAGNGLDADAAVAMARGFPGLQGMDLAQVVTTPQRYEWTEGS---WRFGAEP 181
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
S + V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDG+ SNGPGD
Sbjct: 182 VQSGQGGFHVVAYDFGVKRNILRLLADRGCRVTVVPARTPAAEALALKPDGLFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YAVA ++E L +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAVAAIREFLDTGIPVFGICLGHQLLALAAG 277
>gi|427714392|ref|YP_007063016.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp. PCC
6312]
gi|427378521|gb|AFY62473.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. PCC
6312]
Length = 383
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 185/276 (67%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL DG+++ K+FGA GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNT
Sbjct: 8 SALLVLADGTVFMGKAFGAKGTTVGEVVFNTGMTGYQEVLTDPSYCGQIVTFTYPELGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + G + R++ SNWR ++L +YL + I GIY +DTRA+TR++R
Sbjct: 68 GVNREDEESIYPHVKGAIARNICEQPSNWRAEQSLSDYLKKHGIPGIYGIDTRALTRKIR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF-NTH 185
G++ G +STE + L ++ + + G++L V+ + +EW E T W+F T
Sbjct: 128 TVGAMNGAISTEILDPVELLGQVQAAPSMQGLNLAKTVTTPKAYEWTEPTAAAWEFAATV 187
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + V+A DFG+K NILRRLASYGC+++VVP+ A+E L PDG+ SNGPGDP
Sbjct: 188 DPDQAPLLVVAIDFGVKRNILRRLASYGCKVMVVPANTSAAEILAHNPDGIFLSNGPGDP 247
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
+AV + + LL GK P+FGIC+GHQLLG +LG
Sbjct: 248 AAVTEGITTAQALLEAGK-PMFGICLGHQLLGLSLG 282
>gi|350553429|ref|ZP_08922604.1| carbamoyl-phosphate synthase, small subunit [Thiorhodospira
sibirica ATCC 700588]
gi|349790606|gb|EGZ44512.1| carbamoyl-phosphate synthase, small subunit [Thiorhodospira
sibirica ATCC 700588]
Length = 374
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 181/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGSVFRGVAIGAPGQSVGEVVFNTSMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +DEES GLV+R + SNWR E+LG+YL ++ I +DTR +TR LR+
Sbjct: 65 INPEDEESAGIHATGLVVRDVPALLSNWRSRESLGDYLMRHGVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
G+ G + E + + L +R++ + G+DL +VS P+ W E W H
Sbjct: 125 KGAQNGCIMAGEGLDEADALAQARAFPGLQGMDLAKEVSTISPYVWDEGV---WQLGLGH 181
Query: 186 ERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+R S+ Y+V+AYD+GIK NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGD
Sbjct: 182 QRQSEPRYQVVAYDYGIKRNILRMLAERGCRVTVVPAQTPAAEVLAMRPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ + E++ VP +GIC+GHQLLG A G
Sbjct: 242 PQPCTYAIKAIAEIVEAGVPTYGICLGHQLLGLASG 277
>gi|71279234|ref|YP_270133.1| carbamoyl phosphate synthase small subunit [Colwellia
psychrerythraea 34H]
gi|71144974|gb|AAZ25447.1| carbamoyl-phosphate synthase, small subunit [Colwellia
psychrerythraea 34H]
Length = 383
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/287 (47%), Positives = 186/287 (64%), Gaps = 23/287 (8%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG++++ + GA G+ VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SAILVLEDGTVFKGTAIGAQGSAVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D+ES GLVIR L + SN+R + L +YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDKESNSIVAKGLVIRDLPLLASNFRNEQNLSDYLIAHNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQEL----LEMSRSWD-IVGIDLISDVSGKEPFEWVES------ 175
+ G+ G + T + SD+ L L ++++ + G+DL VS KE ++W +
Sbjct: 124 EKGAQNGCILTLDDSSDESLQADALTQAKAFPGLKGMDLAKVVSTKEQYQWTDGSWELGK 183
Query: 176 --TKPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKP 233
TKPD + + V+AYDFG KHNILR L GC++ VVP+ PASE + + P
Sbjct: 184 GFTKPD---------NLEFHVVAYDFGAKHNILRMLVDRGCKLTVVPAQTPASEVIAMNP 234
Query: 234 DGVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DG+ SNGPGDP YA++ ++ L ++PVFGIC+GHQLLG A G
Sbjct: 235 DGIFLSNGPGDPEPCDYAISAIQSFLETEIPVFGICLGHQLLGLASG 281
>gi|411008804|ref|ZP_11385133.1| carbamoyl-phosphate synthase small subunit [Aeromonas aquariorum
AAK1]
Length = 378
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 178/278 (64%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L +YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQIHAQGLIIRDLPILASNFRNQQSLSDYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + L +R++ + G+DL +V+ E + W E + W
Sbjct: 125 KGAQAGCILAGKQLDEAHALSQARAFPGLKGMDLAKEVTVGEAYNWTEGS---WQLGKGH 181
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L L PDG+ SNGP
Sbjct: 182 VTPDADQLKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLALNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ +K L PVFGIC+GHQLLG A G
Sbjct: 242 GDPEPCDYAIEAIKTFLDTNTPVFGICLGHQLLGLASG 279
>gi|34499259|ref|NP_903474.1| carbamoyl phosphate synthase small subunit [Chromobacterium
violaceum ATCC 12472]
gi|34105110|gb|AAQ61466.1| carbomyl phosphate synthetase small subunit [Chromobacterium
violaceum ATCC 12472]
Length = 375
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 185/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG++++ + GA+G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 6 AILVLADGTLFKGSAIGAAGHTVGEVVFNTAITGYQEILTDPSYTRQIVTLTYPHIGNVG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR F +GL+IR L + SN+R ++L +YL + N++ I D+DTR +TR LR+
Sbjct: 66 ANSEDTESRAVFASGLIIRDLPLLHSNFRAEDSLSDYLKKHNVVAIADIDTRKLTRILRE 125
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + +E+K+ LE++R + + G DL VS ++P+ W E W
Sbjct: 126 KGAQAGCIMAGDIDEAKA----LELARGFGSMAGQDLAKVVSCQKPYAWTEK---QWKLG 178
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ S + V+AYDFG+KHNILR LA GCQ+ +VP+ PA++ L L P GV SNG
Sbjct: 179 AGYQVQASTRFHVVAYDFGVKHNILRMLAERGCQLTIVPAQTPAADVLALNPHGVFLSNG 238
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+A ++++L K+PVFGIC+GHQLLG A G
Sbjct: 239 PGDPEPCGYAIAAIRDILETKLPVFGICLGHQLLGLATG 277
>gi|345874134|ref|ZP_08825950.1| carbamoyl-phosphate synthase, small subunit [Neisseria weaveri LMG
5135]
gi|343970779|gb|EGV38950.1| carbamoyl-phosphate synthase, small subunit [Neisseria weaveri LMG
5135]
Length = 376
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/276 (50%), Positives = 180/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGSI+ S G GT GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSIFHGTSVGYQGTTSGEVVFNTSITGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR + AGL+IR L + SN+R +E+L YL + I D+DTR +TR LR
Sbjct: 65 ANSEDAESRSVYAAGLIIRDLPLLHSNFRSSESLQEYLVRNQTVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
G+ G + T ++++ E+ ++ +VG DL +V+ E +EW E +W
Sbjct: 125 KGAQAGAILTGADATEEKARELIAAFGSMVGKDLAKEVTCGESYEWTEG---EWKLGKGF 181
Query: 186 ERNS-KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
ER S + + V+AYDFG+K NILR LA GC++ VVP+ PA + L + PDGV SNGPGD
Sbjct: 182 ERPSEQPFHVVAYDFGVKTNILRMLAERGCRLTVVPAQTPAKDVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+A VKELL K P+FGIC+GHQLLG A+G
Sbjct: 242 PEPCDYAIAAVKELLESKKPLFGICLGHQLLGLAVG 277
>gi|307546739|ref|YP_003899218.1| carbamoyl phosphate synthase small subunit [Halomonas elongata DSM
2581]
gi|307218763|emb|CBV44033.1| carbamoyl phosphate synthase small subunit [Halomonas elongata DSM
2581]
Length = 381
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 184/282 (65%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALEDGSVFHGTAIGADGQTSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
VN +D ES AGLVIR L + SN+RC +TL +YLA++N++GI D+DTR +TR LR
Sbjct: 65 VNSEDVESSSIAAAGLVIRDLPLLASNFRCEQTLSDYLAQQNVLGIADIDTRRLTRLLRD 124
Query: 127 ---QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF 182
Q+G+++ E ++ LE + ++ + G+DL VS EP+EW E +W
Sbjct: 125 KGSQNGAILAGPDAEGEGAEARALEAAGAFPGLKGMDLAKVVSCTEPYEWSEG---EWTL 181
Query: 183 NT----HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYD+G+K NILR LAS GC++ VVP+ PA E L + PDG+
Sbjct: 182 GSGYADASEGERPYHVVAYDYGMKRNILRMLASRGCRLTVVPAQTPAEEVLAMNPDGIFL 241
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ ++ L ++PVFGIC+GHQLL A G
Sbjct: 242 SNGPGDPEPCDYAISAIQAFLETEIPVFGICLGHQLLALASG 283
>gi|349574464|ref|ZP_08886413.1| carbamoyl-phosphate synthase, small subunit [Neisseria shayeganii
871]
gi|348013972|gb|EGY52867.1| carbamoyl-phosphate synthase, small subunit [Neisseria shayeganii
871]
Length = 377
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/276 (50%), Positives = 180/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R S G G GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFRGTSIGYEGATSGEVVFNTSMTGYQEILTDPSYRKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES AGL++R L + SN+R +E+L +YL + I D+DTR +TR LR
Sbjct: 65 TNGEDEESGAVHAAGLIVRDLPLLHSNFRSSESLQDYLVRHRTVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T ++++ E+ + +VG DL +V+ KE ++W E +W
Sbjct: 125 KGAQAGAILTGSEATEEKARELIAEFGSMVGKDLAKEVTVKEAYKWTEG---EWQLGRGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+++ Y V+AYDFG+K NILR LA+ GC++ VVP+ PA + L L PDGV SNGPGD
Sbjct: 182 VTPDAQPYHVVAYDFGVKTNILRMLAARGCRLTVVPAQTPAKDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+A VKELL K P+FGIC+GHQLLG ALG
Sbjct: 242 PEPCDYAIAAVKELLESKKPLFGICLGHQLLGLALG 277
>gi|222056348|ref|YP_002538710.1| carbamoyl phosphate synthase small subunit [Geobacter daltonii
FRC-32]
gi|221565637|gb|ACM21609.1| carbamoyl-phosphate synthase, small subunit [Geobacter daltonii
FRC-32]
Length = 373
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG I++ +SFGASG GEVVFNT++TGYQE+LTDPSY GQ V MT IGNTG
Sbjct: 3 AVLALADGRIFKGRSFGASGEATGEVVFNTAMTGYQEVLTDPSYKGQMVTMTYTQIGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES+Q +L+G +++ SNWR +L YL E I+GI +DTRA+TR LR
Sbjct: 63 INGEDIESKQLYLSGFIVKEYHDCHSNWRATMSLDAYLKENGIVGIQGLDTRALTRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF----- 182
+G+ G++ST + + + + + G+DL S VS +P+ W + WD
Sbjct: 123 NGAQNGIISTVDFDPESLVKKARAIPSMAGLDLASGVSTDKPYHWTQGL---WDLEGGYP 179
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+N K Y+V+AYDFGIK+NILR L GC + VVP+T+PA E L + PDG+ SNGP
Sbjct: 180 EVDAKNLK-YKVVAYDFGIKYNILRCLVDAGCDVTVVPATFPAEEALAMNPDGIFLSNGP 238
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + +++ +GK P+FGIC+GHQLLG ALG
Sbjct: 239 GDPEPLVKVQEEIRKFIGKKPIFGICLGHQLLGLALG 275
>gi|423197265|ref|ZP_17183848.1| carbamoyl-phosphate synthase small chain [Aeromonas hydrophila SSU]
gi|404631512|gb|EKB28145.1| carbamoyl-phosphate synthase small chain [Aeromonas hydrophila SSU]
Length = 378
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 178/278 (64%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S G G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGVEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L +YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQIHAQGLIIRDLPILASNFRNQQSLSDYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + LE +R++ + G+DL +V+ E + W E + W
Sbjct: 125 KGAQAGCILAGKQVDEAYALEQARAFPGLKGMDLAKEVTVGEAYNWTEGS---WQLGKGH 181
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L L PDG+ SNGP
Sbjct: 182 VTPDADQLKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLALNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ +K L PVFGIC+GHQLLG A G
Sbjct: 242 GDPEPCDYAIEAIKTFLDTNTPVFGICLGHQLLGLASG 279
>gi|56751979|ref|YP_172680.1| carbamoyl phosphate synthase small subunit [Synechococcus elongatus
PCC 6301]
gi|81561611|sp|Q5N0L0.1|CARA_SYNP6 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|56686938|dbj|BAD80160.1| carbamoyl-phosphate synthase small chain [Synechococcus elongatus
PCC 6301]
Length = 391
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 186/273 (68%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ + GA+GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 19 ALLVLADGSVFHGYACGAAGTVIGEVVFNTGMTGYQEVLTDPSYCGQIVSFTYPELGNTG 78
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + ++GL+ R+++ SNWR +L +YL + NI+GIY +DTRA+T+ LR
Sbjct: 79 VNPEDEESARPQVSGLIARNVARRHSNWRADRSLPDYLQQHNIVGIYGIDTRALTQHLRS 138
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +ST ++ E+ + + G++L+ V+ P+EW T W+F
Sbjct: 139 TGAMNGGISTTILDPEELWAEVKAAPSMEGLNLVDQVTTDRPYEWQTPTSQTWEF-IEGP 197
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+++ V+A DFG+K NILRRLASYGC++IVVP+ P E L+ +PDGV SNGPGDP+
Sbjct: 198 TTESLTVVAIDFGVKRNILRRLASYGCRVIVVPADTPIEEILRHEPDGVFLSNGPGDPAT 257
Query: 248 VPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V ++ + LL +P+FGIC+GHQ+LG ALG
Sbjct: 258 VKNGISTAQALLQTGLPLFGICLGHQILGSALG 290
>gi|149908714|ref|ZP_01897375.1| carbamoyl-phosphate synthase small subunit [Moritella sp. PE36]
gi|149808256|gb|EDM68195.1| carbamoyl-phosphate synthase small subunit [Moritella sp. PE36]
Length = 386
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 183/279 (65%), Gaps = 7/279 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGAEGHSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES GL+IR L + TSN+R ++L +YL ERN++GI D+DTR +TR LR+
Sbjct: 65 TNDEDAESSDVHACGLIIRDLPLVTSNFRNQQSLTDYLKERNVVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVL-----STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + ES + + LE+++++ + G+DL +V+ KE +EW + +
Sbjct: 125 KGAQAGCIIAGGSIAGESIDEAKALELAKAFPGLKGMDLAKEVTVKEAYEWKQGSWTLMG 184
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYD+G+K NILR L GC+I VVP+ A E L L PDGV SNG
Sbjct: 185 GLPADATDSRFHVVAYDYGVKRNILRMLVDRGCRITVVPAQTTAKEVLALNPDGVFLSNG 244
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+A +KE+L +PVFGIC+GHQLL A G
Sbjct: 245 PGDPEPCDYAIAAIKEILTTDIPVFGICLGHQLLALASG 283
>gi|123966267|ref|YP_001011348.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9515]
gi|123200633|gb|ABM72241.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. MIT 9515]
Length = 379
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 188/276 (68%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G+ + SFGA GT +GE+VFNT +TGYQE++TDPSY GQ + T P IGNT
Sbjct: 8 NAKLVLSNGTTFSGYSFGAVGTTLGEIVFNTGMTGYQEVITDPSYFGQILTFTYPEIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+NF+D ES C + GL++R+ S SNWR +L +L + NI+G+Y VDTRA+ + LR
Sbjct: 68 GINFEDSESDNC-VKGLIVRNYSNNNSNWRSQISLNQWLIDNNIIGLYGVDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+GS+ G++++E + D L +S + D+ G++L +VS K + W E+TK +D +
Sbjct: 127 SNGSMNGLITSENNNLDSCLKLISNAPDMNGLNLSREVSTKNNYFWKETTKTSFDIRKKD 186
Query: 187 RNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+K +++A DFGIK +IL RL S+GC+++V+PS + L PDG+ FSNGPGDP
Sbjct: 187 IGTKNKLKIVAIDFGIKKSILNRLVSHGCEVLVLPSHSSFEDVLGNNPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S V + + K L+ GK+P+FGIC+GHQ+ G ALG
Sbjct: 247 STVLDGINLAKSLINYGKIPMFGICLGHQIFGLALG 282
>gi|148263915|ref|YP_001230621.1| carbamoyl phosphate synthase small subunit [Geobacter
uraniireducens Rf4]
gi|146397415|gb|ABQ26048.1| carbamoyl-phosphate synthase small subunit [Geobacter
uraniireducens Rf4]
Length = 373
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 179/276 (64%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG I++ +SFGASG GEVVFNT++TGYQE+LTDPSY GQ V MT +GNTG
Sbjct: 3 AVLALADGRIFKGRSFGASGEATGEVVFNTAMTGYQEVLTDPSYKGQMVTMTYTQVGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES Q +L+G +++ SNWR +L YL E ++GI +DTRA+TR LR
Sbjct: 63 INPEDIESNQLYLSGFIVKEYHDCYSNWRATMSLDAYLKENGVVGIQGLDTRALTRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G++ST + + + ++ + G+DL S VS +P+ W E+ W+ R
Sbjct: 123 KGAQNGIISTVDFDPESLVRKVRSIPSMAGLDLASGVSCDKPYHWSEAL---WELGEGYR 179
Query: 188 NSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + Y+V+AYDFGIK NILR L S GC + VVP+T+PA E L + PDG+ SNGPG
Sbjct: 180 QAASKDLKYKVVAYDFGIKFNILRCLVSAGCDVTVVPATFPAEEALAMAPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP + + +++ +GK P+FGIC+GHQLLG LG
Sbjct: 240 DPEPMHAVIENIRKFVGKKPIFGICLGHQLLGLVLG 275
>gi|309792607|ref|ZP_07687068.1| carbamoyl-phosphate synthase, small subunit [Oscillochloris
trichoides DG-6]
gi|308225329|gb|EFO79096.1| carbamoyl-phosphate synthase, small subunit [Oscillochloris
trichoides DG6]
Length = 369
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 183/271 (67%), Gaps = 3/271 (1%)
Query: 11 VLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNF 70
+LEDG ++ +SFGA+G ++GEVVFNT +TGYQEILTDPSY GQ V MT PHIGNTGVN
Sbjct: 1 MLEDGRVFAGRSFGAAGERIGEVVFNTGMTGYQEILTDPSYCGQLVTMTAPHIGNTGVNE 60
Query: 71 DDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGS 130
D ES + +AG ++RS S S+WR +L L + I+ I DVDTRA+TR +R G+
Sbjct: 61 FDPESFRPQVAGFIVRSYSEEYSSWRSRGSLAQLLRDYQIVAISDVDTRALTRHIRTAGA 120
Query: 131 LIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKP-DWDFNTHERN 188
+ G++ST +S + L+E +RS + G DL VS P+ W E++ P ++
Sbjct: 121 MRGIIST-TGESVESLIEKARSAPPMEGQDLTRVVSCTTPYAWDENSLPFSPPYSYGIAR 179
Query: 189 SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAV 248
S + V+AYDFG+K ILRRL +GC++ VVP + A E L LKPDGV +SNGPGDP+A
Sbjct: 180 STQFHVVAYDFGLKRTILRRLVDHGCRVTVVPGSTSAEEVLALKPDGVFYSNGPGDPAAT 239
Query: 249 PYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
YA ++ LLGK VFGIC+GHQLLG ALG
Sbjct: 240 VYAFENLRGLLGKTVVFGICLGHQLLGLALG 270
>gi|397170807|ref|ZP_10494217.1| carbamoyl-phosphate synthase small subunit [Alishewanella aestuarii
B11]
gi|396087281|gb|EJI84881.1| carbamoyl-phosphate synthase small subunit [Alishewanella aestuarii
B11]
Length = 374
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 184/277 (66%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGVSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + + GL+IR L + SN+R +L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNEEDEESGKIWAKGLIIRDLPLLASNFRNQLSLSQYLQNNNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + + L++++ + + G+DL +V+ P++W E + W
Sbjct: 124 EKGAQNGCIMAGDNLDEAKALQLAKGFPGLSGMDLAKEVTVSAPYQWTEGS---WQLGVG 180
Query: 186 ER--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ ++ + V+AYDFG+K NILR LA GC++ VVP+ PA++ L L PDG+ SNGPG
Sbjct: 181 HQAAAAERFHVVAYDFGVKRNILRMLADRGCKLTVVPAQTPAADVLALNPDGIFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+ YA+ +K L +P+FGIC+GHQLL A G
Sbjct: 241 DPAPCTYAIEAIKAFLETDIPIFGICLGHQLLALASG 277
>gi|294668420|ref|ZP_06733523.1| hypothetical protein NEIELOOT_00338 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309738|gb|EFE50981.1| hypothetical protein NEIELOOT_00338 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 375
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/278 (49%), Positives = 184/278 (66%), Gaps = 11/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R KS G G GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSLFRGKSIGYKGVTSGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E +Q + AGL+IR L + S++R E+L YL + I D+DTR +T+ LR
Sbjct: 65 VNPEDVEGKQVYAAGLIIRDLPLLESSFRSKESLQKYLTRNKTVAIADIDTRRLTQILRI 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW----DF 182
G+ G + T E ++++ E+ ++ +VG DL +VS +P+EW E +W F
Sbjct: 125 KGAQAGAILTGEDATEEKARELINAFGSMVGKDLAKEVSCTQPYEWTEG---EWVLGQGF 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T E + Y V+AYD+G+K NILR LA+ GC++ VVP+ PA E L + PDG+ SNGP
Sbjct: 182 VTPEY--QPYHVVAYDYGVKTNILRMLAARGCRLTVVPAQTPAEEVLAMTPDGIFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GDP + YA+ V++LL K P+FGIC+GHQLLG ALG
Sbjct: 240 GDPQSCDYAITAVQKLLDSKKPLFGICLGHQLLGLALG 277
>gi|375109232|ref|ZP_09755481.1| carbamoyl-phosphate synthase small subunit [Alishewanella jeotgali
KCTC 22429]
gi|374570536|gb|EHR41670.1| carbamoyl-phosphate synthase small subunit [Alishewanella jeotgali
KCTC 22429]
Length = 374
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 184/277 (66%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGVSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + + GL+IR L + SN+R +L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNEEDEESGKIWAKGLIIRDLPLLASNFRNQLSLSQYLQNNNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + + L++++ + + G+DL +V+ P++W E + W
Sbjct: 124 EKGAQNGCIMAGDNLDEAKALQLAKGFPGLSGMDLAKEVTVSAPYQWTEGS---WQLGVG 180
Query: 186 ER--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ ++ + V+AYDFG+K NILR LA GC++ VVP+ PA++ L L PDG+ SNGPG
Sbjct: 181 HQAAAAERFHVVAYDFGVKRNILRMLADRGCKLTVVPAQTPAADVLALNPDGIFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+ YA+ +K L +P+FGIC+GHQLL A G
Sbjct: 241 DPAPCTYAIEAIKAFLETDIPIFGICLGHQLLALASG 277
>gi|81300931|ref|YP_401139.1| carbamoyl phosphate synthase small subunit [Synechococcus elongatus
PCC 7942]
gi|123556422|sp|Q31LB7.1|CARA_SYNE7 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|81169812|gb|ABB58152.1| carbamoyl-phosphate synthase small subunit [Synechococcus elongatus
PCC 7942]
Length = 391
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 186/273 (68%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ + GA+GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 19 ALLVLADGSVFHGYACGAAGTVIGEVVFNTGMTGYQEVLTDPSYCGQIVSFTYPELGNTG 78
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + ++GL+ R+++ SNWR +L +YL + NI+GIY +DTRA+T+ LR
Sbjct: 79 VNPEDEESARPQVSGLIARNVARRHSNWRADRSLPDYLQQHNIVGIYGIDTRALTQHLRS 138
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +ST ++ E+ + + G++L+ V+ P+EW T W+F
Sbjct: 139 TGAMNGGISTTILDPEELWAEVKAAPSMEGLNLVDQVTTDRPYEWQTPTSQTWEF-IEGP 197
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+++ V+A DFG+K NILRRLASYGC++IVVP+ P E L+ +PDGV SNGPGDP+
Sbjct: 198 TTESLTVVAIDFGVKRNILRRLASYGCRVIVVPADTPIEEILRHEPDGVFLSNGPGDPAT 257
Query: 248 VPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V ++ + LL +P+FGIC+GHQ+LG ALG
Sbjct: 258 VKNGISTAQALLQTGLPLFGICLGHQILGLALG 290
>gi|406677689|ref|ZP_11084869.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AMC35]
gi|404623496|gb|EKB20346.1| carbamoyl-phosphate synthase small chain [Aeromonas veronii AMC35]
Length = 378
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 177/278 (63%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQIHAQGLIIRDLPILASNFRNQQSLSEYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + LE +R++ + G+DL +V+ E + W T W
Sbjct: 125 KGAQAGCILAGKQVDEAYALEQARAFPGLKGMDLAKEVTVGEAYNW---TTGSWQLGKGH 181
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L + PDG+ SNGP
Sbjct: 182 VTPDADQLKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLAMNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ +K L PVFGIC+GHQLLG A G
Sbjct: 242 GDPEPCDYAIEAIKAFLNTNTPVFGICLGHQLLGLASG 279
>gi|152998031|ref|YP_001342866.1| carbamoyl phosphate synthase small subunit [Marinomonas sp. MWYL1]
gi|150838955|gb|ABR72931.1| carbamoyl-phosphate synthase, small subunit [Marinomonas sp. MWYL1]
Length = 396
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 188/284 (66%), Gaps = 10/284 (3%)
Query: 3 WNV---ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMT 59
W V +A L LEDG+I++ S GA G+ EVVFNTS+TGYQEILTDPSYA Q V +T
Sbjct: 17 WEVPLATSAILALEDGTIFKGVSIGADGSSTAEVVFNTSMTGYQEILTDPSYARQMVTLT 76
Query: 60 NPHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTR 119
PHIGNTGVN +DEES + + GL+IR L + S+WR E+L +YL + ++GI D+DTR
Sbjct: 77 YPHIGNTGVNSEDEESDKVWCEGLIIRDLPLVASSWRSQESLDSYLKRKGVVGIADIDTR 136
Query: 120 AITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKP 178
+TR LR+ G+L G + E+ + + ++++ + G+DL +V+ ++ +EW EST
Sbjct: 137 KLTRILREKGALAGCIIAGENLDEAAAVAAAKAFPGLKGMDLAKEVTVEKAYEWTEST-- 194
Query: 179 DWDFNTHERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
WD ++ + V+AYD+G+K NILR L GC+I VVP+ PAS+ L + PDGV
Sbjct: 195 -WDLVKGHTTPESFDFHVVAYDYGVKRNILRMLVERGCRITVVPAKTPASDVLAMNPDGV 253
Query: 237 LFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +KE+L +PVFGIC+GHQLL A G
Sbjct: 254 FLSNGPGDPEPCDYAIQAIKEILETDIPVFGICLGHQLLALASG 297
>gi|126664878|ref|ZP_01735862.1| Carbamoylphosphate synthase small subunit [Marinobacter sp. ELB17]
gi|126631204|gb|EBA01818.1| Carbamoylphosphate synthase small subunit [Marinobacter sp. ELB17]
Length = 376
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 182/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + G G GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSLFYGTAIGVDGETSGEVVFNTAMTGYQEILTDPSYARQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + A L+IR L + SNWR ++L YL + NI+GI D+DTR +TR LR
Sbjct: 65 VNPEDVESDRIHAAALIIRDLPLAASNWRSTQSLDGYLRDNNIVGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + ES + + LE+++++ + G+DL +VS K+ W E+ WD
Sbjct: 125 KGSQSGAVVAGESATAERALELAKAFPGLKGMDLAKEVSSKDVSHWTETA---WDLVNGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+++S ++++AYD+GIK NILR LAS GC I VVP+ PA++ L + PDGV SNGPGD
Sbjct: 182 GQQDSPHFKIVAYDYGIKLNILRMLASRGCDITVVPAQTPAADVLVMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIKAIQDILEADLPVFGICLGHQLLALASG 277
>gi|85860897|ref|YP_463099.1| carbamoyl phosphate synthase small subunit [Syntrophus
aciditrophicus SB]
gi|85723988|gb|ABC78931.1| carbamoyl-phosphate synthase small chain [Syntrophus aciditrophicus
SB]
Length = 401
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 184/273 (67%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG ++R ++F G +GEVVFNT +TGYQE+LTDPSY GQ V MT P IGN G
Sbjct: 24 ALLVLEDGCVFRGEAFAGEGEVLGEVVFNTGMTGYQEVLTDPSYKGQIVAMTYPLIGNYG 83
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D E+ L G ++R S SNWR ++L ++ + +G+ +D RA+TRRLR
Sbjct: 84 INPEDMEAAGISLEGFIVREYSDFPSNWRSRQSLKTFMESQGKLGVEGLDCRALTRRLRV 143
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G+L+TE + + LL+ R++ +VG DL+ V+ +EP+ WV + D +
Sbjct: 144 SGAMRGILTTE-IQDVEILLQRVRAYPGLVGQDLVRTVTCQEPYRWVRGSVQPADRDRRP 202
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
K RV+ D G+K+NILR L + GC++IVVP+ + L PDG+L SNGPGDP+
Sbjct: 203 EEGKNLRVVVLDCGVKYNILRCLEAEGCEVIVVPACSSDEQILSWSPDGLLLSNGPGDPA 262
Query: 247 AVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
A+PY VA V++LLGKVP+FGIC+GHQ+LGQA+G
Sbjct: 263 ALPYIVATVRQLLGKVPIFGICLGHQILGQAVG 295
>gi|117618924|ref|YP_857232.1| carbamoyl-phosphate synthase small subunit [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117560331|gb|ABK37279.1| carbamoyl-phosphate synthase, small subunit [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 378
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/278 (48%), Positives = 178/278 (64%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQIHAQGLIIRDLPILASNFRNQQSLSEYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + LE +R++ + G+DL +V+ E + W E + W
Sbjct: 125 KGAQAGCILAGKQIDEGFALEQARAFPGLKGMDLAKEVTVGEAYNWTEGS---WQLGKGH 181
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L L PDG+ SNGP
Sbjct: 182 VTPAADQLKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLALNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ ++ L +PVFGIC+GHQLLG A G
Sbjct: 242 GDPEPCDYAIEAIEAFLKTNIPVFGICLGHQLLGLASG 279
>gi|408373093|ref|ZP_11170791.1| carbamoyl phosphate synthase small subunit [Alcanivorax
hongdengensis A-11-3]
gi|407766931|gb|EKF75370.1| carbamoyl phosphate synthase small subunit [Alcanivorax
hongdengensis A-11-3]
Length = 374
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/277 (48%), Positives = 185/277 (66%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R + GA+G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGVAIGATGQTVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + + +GLVIR L++ SNWR ++L +YL + NI+ I D+DTR +TR LR
Sbjct: 65 VTPEDEESARIWASGLVIRDLAMTVSNWRSQQSLPDYLRDNNIVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + + + + L ++ + + G+DL +V+ E + W EST WD
Sbjct: 125 KGAQNGCILAGDDLDEAKALAAAKGFPGLKGMDLAREVTVSESYTWTEST---WDLEQGH 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYD+G+K NILR LA GC++ VVP+ PA++ L + PDG+ SNGPGD
Sbjct: 182 TEQTEARFHVVAYDYGVKRNILRMLAERGCKLTVVPAQTPAADVLAMNPDGIFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ ++E++ GK PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIEAIQEIVATGK-PVFGICLGHQLLALASG 277
>gi|319787364|ref|YP_004146839.1| carbamoyl-phosphate synthase, small subunit [Pseudoxanthomonas
suwonensis 11-1]
gi|317465876|gb|ADV27608.1| carbamoyl-phosphate synthase, small subunit [Pseudoxanthomonas
suwonensis 11-1]
Length = 398
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 179/274 (65%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GASG VGEVVFNT++TGYQEI+TDPSYA Q V +T PHIGNTG
Sbjct: 30 AILVLEDGTVFEGESVGASGLAVGEVVFNTAMTGYQEIVTDPSYARQLVTLTYPHIGNTG 89
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ + + AGL++R + SNWR L ++LA R ++ I +DTR +TR LR+
Sbjct: 90 CTGQDDEAAKVWSAGLIVRDVPRRPSNWRSEAPLQDWLAARGVVAIAGIDTRKLTRLLRE 149
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G L E + LE +R + + G+DL VS E + W E + D D N
Sbjct: 150 RGAQNGALMAGEGIDVETALEAARKFPGLKGMDLAQVVSTTERYAWTEG-QLDLDANAFV 208
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
K +RV+AYDFG+K NILR LA GC++ VVP+ PA+E L L PDGV SNGPGDP
Sbjct: 209 TAEKKFRVVAYDFGMKTNILRMLAERGCEVTVVPAKTPAAEVLALDPDGVFMSNGPGDPE 268
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A ++E + KVP+FGIC+GHQLL A G
Sbjct: 269 PCDYAIAAIREFVARKVPLFGICLGHQLLALAAG 302
>gi|152978226|ref|YP_001343855.1| carbamoyl phosphate synthase small subunit [Actinobacillus
succinogenes 130Z]
gi|150839949|gb|ABR73920.1| carbamoyl-phosphate synthase, small subunit [Actinobacillus
succinogenes 130Z]
Length = 375
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 181/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S GA+G +GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGTSIGAAGHTIGEVVFNTAMTGYQEILTDPSYFRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES + AGL+IR L + SN+R ++L +YL + N++ I D+DTR +TR LR
Sbjct: 65 TNVEDLESDGVYAAGLIIRDLPMIHSNFRSNQSLSDYLKDNNVVAIADIDTRRLTRLLRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G++ G + T E + + LE++ S+ + G DL +V+ KE ++W T+ +W
Sbjct: 125 KGAMAGCIMTGEV-DETKALELALSFGSMAGKDLAQEVTTKETYQW---TQGEWQLGKGY 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYDFG+K NILR LA GC + VVP+ A + L L PDGV SNGPGD
Sbjct: 181 VEQQQAKFNVVAYDFGVKRNILRMLAERGCHVTVVPAKTSAKKVLALNPDGVFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+ +KE+L K PVFGIC+GHQLLG A G
Sbjct: 241 PEPCDYAINAIKEILATKKPVFGICLGHQLLGLASG 276
>gi|389683325|ref|ZP_10174657.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
chlororaphis O6]
gi|388552838|gb|EIM16099.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
chlororaphis O6]
Length = 378
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ SD+ + +R + + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISDEAAIAAARGFPGLKGMDLAKVVSTKESYEWRSSV---WNLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PASE L LKPDGV SNG
Sbjct: 182 HPTIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPASEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALAAG 280
>gi|372273066|ref|ZP_09509114.1| carbamoyl phosphate synthase small subunit [Marinobacterium
stanieri S30]
Length = 379
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/275 (49%), Positives = 186/275 (67%), Gaps = 3/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R + GA G GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGIAIGADGESSGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D+ES + + AGLVIR L + SN+R ++L YL + NI+GI D+DTR +TR LR+
Sbjct: 65 VNQEDQESTRTWAAGLVIRDLPLLASNFRSEQSLDAYLKDNNIVGIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + +++ L +R++ + G+DL + S + +EW ST + +
Sbjct: 125 KGAQNGCILAGDELDEEKALAAARAFPGLKGMDLAKEASVEAQYEWRSSTWALGQGHAEK 184
Query: 187 RNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ + V+AYDFG+KHNILR L GC++ VVP+ PA++ L L PDGV SNGPGDP
Sbjct: 185 ADSELPFHVVAYDFGVKHNILRMLVERGCRLTVVPAQTPAADVLALNPDGVFLSNGPGDP 244
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ ++++L +VPVFGIC+GHQLL A G
Sbjct: 245 EPCDYAITAIRDILDTQVPVFGICLGHQLLALASG 279
>gi|392548668|ref|ZP_10295805.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas rubra ATCC 29570]
Length = 378
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 182/279 (65%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGADGLSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + + GLVIR L + SN+R ++L +YL RNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEADKIWAKGLVIRDLPLLASNFRNEQSLSDYLKARNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD---- 181
G+ G + + +Q+ LE ++++ + G+DL V+ ++ +EW E + W
Sbjct: 124 DKGAQNGCIIAGDEIDEQQALEAAKAFPGLKGMDLAKVVTTEQTYEWREGS---WTLGQG 180
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
F T + + V+AYDFG+K NILR L GC++ VVP+ A+E L + PDG+ SNG
Sbjct: 181 FQTLSSEEEKFHVVAYDFGVKKNILRMLVDRGCKLTVVPAETSAAEVLAMNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 PGDPEPCTYAIDAIKAFLETDTPIFGICLGHQLLALASG 279
>gi|33861507|ref|NP_893068.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33634084|emb|CAE19410.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 380
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 188/276 (68%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G + SFGA G+ VGE+VFNT +TGYQE+++DPSY GQ + T P IGNT
Sbjct: 8 NAKLVLSNGITFTGYSFGAMGSTVGEIVFNTGMTGYQEVISDPSYFGQIITFTYPEIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+NF+D ES + G+++R+ S SNWR +L E+NI+G+Y +DTRA+ + LR
Sbjct: 68 GINFEDSESDNS-VRGIIVRNFSNNNSNWRSKLNFNQWLIEKNIIGLYGIDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
+GS+ GV+++E++ D L +S + ++ G++L DVS K+ + + +T D+D
Sbjct: 127 SNGSMNGVITSEKNDLDSCLEIISNTPNMQGLNLAKDVSTKKNYIFKATTMTDFDVREKI 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+N +RV+A DFGIK +IL RLAS+GC+I+V+PS + L PDG+ FSNGPGDP
Sbjct: 187 HKNINKFRVVAIDFGIKKSILNRLASHGCEILVLPSNSSFEDVLSHDPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S+V + + K L+ GK+P+FGIC+GHQ+ G ALG
Sbjct: 247 SSVLDGINLAKLLINYGKIPMFGICLGHQIFGLALG 282
>gi|393764332|ref|ZP_10352944.1| carbamoyl-phosphate synthase small subunit [Alishewanella agri
BL06]
gi|392604962|gb|EIW87861.1| carbamoyl-phosphate synthase small subunit [Alishewanella agri
BL06]
Length = 374
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 184/277 (66%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGVSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + + GL+IR L + SN+R +L YL +I+GI D+DTR +TR LR
Sbjct: 64 GTNEEDEESGKIWAKGLIIRDLPLLASNFRNQLSLSQYLKNNHILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + + L++++ + + G+DL +V+ P++W E + W
Sbjct: 124 EKGAQNGCIMAGDNLDEAKALQLAKGFPGLSGMDLAKEVTVSAPYQWTEGS---WQLGVG 180
Query: 186 ER--NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ ++ + V+AYDFG+K NILR LA GC++ VVP+ PA++ L L PDG+ SNGPG
Sbjct: 181 HQAAAAERFHVVAYDFGVKRNILRMLADRGCKLTVVPAQTPAADVLALNPDGIFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+ YA+ +K L +P+FGIC+GHQLL A G
Sbjct: 241 DPAPCTYAIEAIKAFLETDIPIFGICLGHQLLALASG 277
>gi|223938276|ref|ZP_03630171.1| carbamoyl-phosphate synthase, small subunit [bacterium Ellin514]
gi|223892990|gb|EEF59456.1| carbamoyl-phosphate synthase, small subunit [bacterium Ellin514]
Length = 387
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 184/288 (63%), Gaps = 16/288 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L LEDGS++ + FGA T GEV FNTS+TGYQEILTDPSY GQ V MT P IGN
Sbjct: 2 KAILALEDGSVFHGEGFGARATACGEVCFNTSMTGYQEILTDPSYKGQIVAMTYPLIGNY 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N D ES + +AG VIR LS SNWR +L YL + I GI +DTRA+T++LR
Sbjct: 62 GINLQDMESWRPHVAGFVIRELSPVVSNWRADLSLAEYLEKNGIPGIQGIDTRALTKKLR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN-- 183
G+L G +ST E S++E + +++W +VG+D + +V+ KEPF W + F+
Sbjct: 122 VRGALNGFIST-EGISEEEAIARAKNWQGLVGVDYVKEVTHKEPFLWDAKDEQSASFSLT 180
Query: 184 -----THERN------SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLK 232
T RN + ++AYDFG+K+NILRRL G ++ VVP+T A E LK K
Sbjct: 181 RGAGKTEPRNVRDPLPAAEIPIVAYDFGMKYNILRRLRQQGFKVQVVPATTSAEEALKYK 240
Query: 233 PDGVLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P GV SNGPGDP+A+ YAV +L+ VP+FGIC+GHQ+LGQA G
Sbjct: 241 PAGVFLSNGPGDPAALGYAVKAASDLVKSGVPIFGICLGHQILGQAFG 288
>gi|387870129|ref|YP_005801499.1| carbamoyl-phosphate synthase small subunit [Erwinia pyrifoliae DSM
12163]
gi|283477212|emb|CAY73119.1| carbamoyl-phosphate synthase small chain [Erwinia pyrifoliae DSM
12163]
Length = 382
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 180/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q AGLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNSGDEESTQVHAAGLVIRDLPLIASNYRNEEGLSDYLTRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E+ LE +R++ + G+DL +V+ + + W++ + W
Sbjct: 122 LREKGAQNGCIIAGEAPDAAFALEKARAFPGLKGMDLAKEVTTPDAYTWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T +K Y V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDGV
Sbjct: 179 TELPTAKAEGELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGVFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ + LL +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAMTAINRLLETNIPLFGICLGHQLLALASG 280
>gi|422300042|ref|ZP_16387585.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas avellanae
BPIC 631]
gi|407987883|gb|EKG30561.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas avellanae
BPIC 631]
Length = 378
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRHSV---WNLQTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKFNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++LG +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKQVLGTEVPVFGICLGHQLLALAAG 280
>gi|384084010|ref|ZP_09995185.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
thiooxidans ATCC 19377]
Length = 380
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 182/276 (65%), Gaps = 3/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DGSI+R FG+ G VGE+ FNT++TGYQEILTDPSY GQ V +T PHIGNT
Sbjct: 2 QAVLALADGSIYRGTGFGSKGLAVGEICFNTAMTGYQEILTDPSYRGQIVTLTYPHIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D E + F + LV+R+L SNWR +TL ++L ++ I I +DTRA+TRRLR
Sbjct: 62 GINPEDMEGSKIFCSALVLRNLPRTPSNWRSTQTLPDFLTQQGIPAIAGIDTRALTRRLR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEW-VESTKPDWDFNT 184
G+ L ++ E L +R + ++G DL+ DV+ ++ EW + S +P+ +
Sbjct: 122 NGGAQNAALLVGAEVNESEALAAARGFPGLLGRDLVQDVAAQKSSEWLLASGQPEQGYQA 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ V+ YDFG K+NILR LA C+I +VP+ PA+E + L+PDGVLFSNGPGD
Sbjct: 182 RPVSHPQCHVVVYDFGKKNNILRLLADRACRITLVPAKTPAAEVVALRPDGVLFSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P A+ YA +++++ ++P FG+C+GHQLLG ALG
Sbjct: 242 PEALDYAQQAMRDIIAARIPTFGLCLGHQLLGIALG 277
>gi|409396353|ref|ZP_11247356.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. Chol1]
gi|409119130|gb|EKM95517.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. Chol1]
Length = 382
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+RQ + AGLVIR L + SNWR ++LG+YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAEARQVWAAGLVIRDLPLLASNWRNKQSLGDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + ++++ LE++RS+ + G+DL VS E +EW S W+ T
Sbjct: 129 KGAQDGCILAGADATEEKALELARSFPGLKGMDLAKVVSTTERYEWRSSV---WELKTDS 185
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H T Y V+AYD+G+K NILR L + GC++ V+P+ PASE L L PDG+ +NG
Sbjct: 186 HPEIPATELPYHVVAYDYGVKLNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIKAIQEILETDIPVFGICLGHQLLALASG 284
>gi|395498834|ref|ZP_10430413.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. PAMC
25886]
Length = 378
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/279 (49%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+GIKHNILR L GC++ VVP+ PAS+ L L+PDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGIKHNILRMLVERGCRVTVVPAQAPASDVLALQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|259907379|ref|YP_002647735.1| carbamoyl phosphate synthase small subunit [Erwinia pyrifoliae
Ep1/96]
gi|224963001|emb|CAX54484.1| Carbamoyl-phosphate synthase small chain [Erwinia pyrifoliae
Ep1/96]
Length = 391
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 180/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q AGLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNSGDEESTQVHAAGLVIRDLPLIASNYRNEEGLSDYLTRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E+ LE +R++ + G+DL +V+ + + W++ + W
Sbjct: 131 LREKGAQNGCIIAGEAPDAAFALEKARAFPGLKGMDLAKEVTTPDAYTWLQGS---WTLE 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T +K Y V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDGV
Sbjct: 188 TELPTAKAEGELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGVFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ + LL +P+FGIC+GHQLL A G
Sbjct: 248 SNGPGDPEPCDYAMTAINRLLETNIPLFGICLGHQLLALASG 289
>gi|226946318|ref|YP_002801391.1| carbamoyl phosphate synthase small subunit [Azotobacter vinelandii
DJ]
gi|226721245|gb|ACO80416.1| Carbamoyl-phosphate synthase, small subunit [Azotobacter vinelandii
DJ]
Length = 378
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ +D ES + + AGL+IR L + SNWR ++L +YL E + I D+DTR +TR LR+
Sbjct: 65 ITPEDAESARVWAAGLIIRDLPLLASNWRSKQSLPDYLRENGCVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + + S+++ LE++RS+ + G+DL VS EP+EW W T
Sbjct: 125 KGSQNGCILVGDDASEEKALELARSFPGLKGMDLAKVVSCSEPYEWRSGV---WSLATDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYDFG+K NILR L + GC++ VVP+ AS+ L + PDGV SNG
Sbjct: 182 HPEIPAGKLPYHVVAYDFGVKLNILRMLVARGCRLTVVPAQTSASKVLAMNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREILETDIPVFGICLGHQLLALASG 280
>gi|410665925|ref|YP_006918296.1| carbamoyl-phosphate synthase small subunit [Simiduia agarivorans
SA1 = DSM 21679]
gi|409028282|gb|AFV00567.1| carbamoyl-phosphate synthase small subunit [Simiduia agarivorans
SA1 = DSM 21679]
Length = 378
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 174/275 (63%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGSI+R K+ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 9 AILVLEDGSIFRGKAIGADGQSVGEVVFNTAMTGYQEILTDPSYARQVVTLTYPHIGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE + AGLVIR L + SN+R +TL +YLA R I+GI D+DTR +TR LR
Sbjct: 69 TNSEDEECETIWAAGLVIRDLPLLASNFRNTQTLEDYLATRGIVGIADIDTRRLTRILRD 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--H 185
G+ G + E D L + G+DL +V+ +P+ W E + W
Sbjct: 129 KGAQSGCIMAGEIDEDAALAAAKAFGGLKGMDLAKEVTVDKPYAWTEGS---WQLGQGFP 185
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
K ++V+AYD+G+K NILR L GC + VVP+ PA++ L + PDG+ SNGPGDP
Sbjct: 186 TPTEKKFKVVAYDYGVKRNILRMLVDRGCDLTVVPAQTPAADVLAMNPDGIFLSNGPGDP 245
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 246 EPCTYAIDAIKAFLDTDIPVFGICLGHQLLALASG 280
>gi|387770451|ref|ZP_10126631.1| carbamoyl-phosphate synthase, small subunit [Pasteurella bettyae
CCUG 2042]
gi|386904262|gb|EIJ69058.1| carbamoyl-phosphate synthase, small subunit [Pasteurella bettyae
CCUG 2042]
Length = 375
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 180/277 (64%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL DGS++ S GA G +GEVVFNT++TGYQE+LTDPSY Q + +T PHIGNT
Sbjct: 4 SAILVLADGSVFYGTSVGAKGQAIGEVVFNTAMTGYQEVLTDPSYFQQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + AGL+IR L + SN+R ++L YL N++ I D+DTR +TR LR
Sbjct: 64 GTNEEDVESNAVYAAGLIIRDLPLTHSNFRAKQSLSEYLKANNVVAIADIDTRRLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G++ G + T E +++ LE++ ++ + G DL V+ K P++W T+ +W
Sbjct: 124 DKGAMAGCIMTGEI-DEKKALELALAFGSMAGKDLAQVVTTKVPYQW---TQGEWKLGQG 179
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
E + + ++AYDFG+K NILR LA GC I VVP+ PA E L L PDG+ SNGPG
Sbjct: 180 YVEASQPEFNIVAYDFGVKRNILRMLAERGCNITVVPAKTPAKEVLALNPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ +KE+L K PVFGIC+GHQLLG A G
Sbjct: 240 DPEPCDYAINAIKEILVTKKPVFGICLGHQLLGLASG 276
>gi|87121707|ref|ZP_01077594.1| carbamoyl-phosphate synthase small subunit [Marinomonas sp. MED121]
gi|86162958|gb|EAQ64236.1| carbamoyl-phosphate synthase small subunit [Marinomonas sp. MED121]
Length = 380
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/281 (49%), Positives = 181/281 (64%), Gaps = 11/281 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDG+I++ S GA G+ GEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SAILALEDGTIFKGVSIGADGSSTGEVVFNTSMTGYQEILTDPSYARQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GV +DEES + GL+IR L + S+WR ETL YL +N++GI D+DTR +TR LR
Sbjct: 64 GVTEEDEESDSIWCNGLIIRDLPLVASSWRKQETLDAYLTRKNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-----IVGIDLISDVSGKEPFEWVESTKPDWD 181
+ G+ G + + +E+ + + + G+DL +V+ KE EW EST WD
Sbjct: 124 EKGAQAGCIMAGDDVLSEEVQAKALAAARAFPGLKGMDLAKEVTVKEECEWTEST---WD 180
Query: 182 F-NTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
H S+ + V+AYDFG+K NILR L GC++ VVP+ PA+ L + PDGV S
Sbjct: 181 LVKGHTTPSEFDFHVVAYDFGVKRNILRMLVERGCKVTVVPAQTPAAAVLAMNPDGVFLS 240
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+ +KE+L +PVFGIC+GHQLL A G
Sbjct: 241 NGPGDPEPCDYAITAIKEILTTDIPVFGICLGHQLLALASG 281
>gi|410614572|ref|ZP_11325615.1| carbamoyl-phosphate synthase small subunit [Glaciecola psychrophila
170]
gi|410165896|dbj|GAC39504.1| carbamoyl-phosphate synthase small subunit [Glaciecola psychrophila
170]
Length = 381
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 183/280 (65%), Gaps = 7/280 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GASG VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGASGVSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES + + GL+IR L + SN+R +L YL E NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDCESHKVWAKGLIIRDLPLLVSNFRSEMSLSEYLEENNILGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSD---QELLEMSRS---WDIVGIDLISDVSGKEPFEWVESTKPDW 180
G+ G + + D E L ++++ + G+DL +V+ EP++W + +
Sbjct: 124 DKGAQSGCIIASNTLDDIPLDESLALAKAKAFGGLKGMDLAKEVTCTEPYQWTDGSWVLG 183
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ ++ + V+AYDFG+K NILR LA GC++ VVP+ A L LKPDGV SN
Sbjct: 184 EGYQAALDNPAFHVVAYDFGVKRNILRMLADRGCKLTVVPAKTTAEAVLALKPDGVFLSN 243
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP YAV+ +K+LL +P+FGIC+GHQLL A G
Sbjct: 244 GPGDPEPCDYAVSAIKQLLETNIPIFGICLGHQLLALASG 283
>gi|254787221|ref|YP_003074650.1| carbamoyl-phosphate synthase, small subunit [Teredinibacter
turnerae T7901]
gi|259585676|sp|C5BQ30.1|CARA_TERTT RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|237685938|gb|ACR13202.1| carbamoyl-phosphate synthase, small subunit [Teredinibacter
turnerae T7901]
Length = 386
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R S GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILVLEDGSVFRGVSIGATGKSVGEVVFNTSITGYQEILTDPSYARQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE + + GLVIR L + SN+R +++L YL+ +NI+GI D+DTR +TR LR
Sbjct: 73 TNSEDEECKTIWATGLVIRDLPLLASNFRNSQSLDQYLSSKNILGIADIDTRRLTRLLRD 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+L G + + + E LE +R + + G+DL +VS K+ ++W + + W +
Sbjct: 133 KGALAGCIMAGDV-DEAEALETARGFAGLQGMDLAKEVSTKDTYQWRDGS---WKLGSGY 188
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
K + V+AYD+G K NILR L GC + VVP+ PA++ L + PDGV SNGPGD
Sbjct: 189 APLAEKRFNVVAYDYGAKSNILRMLVDRGCDLTVVPAQTPAADVLAMNPDGVFLSNGPGD 248
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ +K LL + +P+FGIC+GHQLL A G
Sbjct: 249 PEPCDYAIDAIKVLLNENMPIFGICLGHQLLALASG 284
>gi|424794086|ref|ZP_18220106.1| carbamoyl-phosphate synthase small subunit [Xanthomonas translucens
pv. graminis ART-Xtg29]
gi|422796174|gb|EKU24731.1| carbamoyl-phosphate synthase small subunit [Xanthomonas translucens
pv. graminis ART-Xtg29]
Length = 384
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 186/274 (67%), Gaps = 4/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAAGLSVGEVVFNTAMTGYQEILTDPSYARQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ Q + AGL++RS+ SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 CTDQDDEAAQVWSAGLIVRSVPRRPSNWRSQVSLPDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + E + LE +RS+ + G+DL VS + + W + + D D N
Sbjct: 125 KGSQNGAVMAGEVNVETA-LEAARSFPGLKGMDLAKVVSTDKAYPWRDG-QLDLDSNAFA 182
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + TY+V+AYD+G+K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+
Sbjct: 183 QAAPTYKVVAYDYGVKLNILRMLAERGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPA 242
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A +K+++ K+P FGIC+GHQLL A G
Sbjct: 243 PCDYAIAAIKQIVASKIPTFGICLGHQLLALAAG 276
>gi|352082140|ref|ZP_08952963.1| carbamoyl-phosphate synthase, small subunit [Rhodanobacter sp.
2APBS1]
gi|351682278|gb|EHA65384.1| carbamoyl-phosphate synthase, small subunit [Rhodanobacter sp.
2APBS1]
Length = 378
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 177/274 (64%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 ALLALEDGSLFHGHAVGAVGDTVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES AGL++R + S+WR E+L +YL + I +DTR +TR LR
Sbjct: 65 VNAEDVESTAVHAAGLIVRDVPRRASSWRSTESLPDYLRRHGTVAIAGIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G + E + L +R++ + G+DL VS P+ W + D D
Sbjct: 125 KGALAGCIVAGEQVDAETALAKARAFPGLNGMDLAKVVSTARPYVWKQGVY-DLDRTAFN 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + ++V+AYDFG K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+
Sbjct: 184 QPATRFKVVAYDFGTKLNILRLLAEQGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPA 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
A YA+A ++ L K+P+FGIC+GHQL+G ALG
Sbjct: 244 ACDYAIAATRQFLDAKIPLFGICLGHQLMGLALG 277
>gi|433676165|ref|ZP_20508313.1| carbamoyl-phosphate synthase small subunit [Xanthomonas translucens
pv. translucens DSM 18974]
gi|430818715|emb|CCP38582.1| carbamoyl-phosphate synthase small subunit [Xanthomonas translucens
pv. translucens DSM 18974]
Length = 384
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 186/274 (67%), Gaps = 4/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAAGLSVGEVVFNTAMTGYQEILTDPSYARQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ Q + AGL++RS+ SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 CTDQDDEAAQVWSAGLIVRSVPRRPSNWRSQVSLPDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + E D LE +R++ + G+DL VS + + W + + D D N
Sbjct: 125 KGSQNGAVMAGEVNVDIA-LEAARTFPGLKGMDLAKVVSTDKAYPWRDG-QLDLDSNAFA 182
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + TY+V+AYD+G+K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+
Sbjct: 183 QAAPTYKVVAYDYGVKLNILRMLAERGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPA 242
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A +K+++ K+P FGIC+GHQLL A G
Sbjct: 243 PCDYAIAAIKQIVASKIPTFGICLGHQLLALAAG 276
>gi|145298638|ref|YP_001141479.1| carbamoylphosphate synthase small subunit [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418360777|ref|ZP_12961443.1| carbamoyl phosphate synthase small subunit [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|142851410|gb|ABO89731.1| Carbamoylphosphate synthase small subunit [Aeromonas salmonicida
subsp. salmonicida A449]
gi|356688025|gb|EHI52596.1| carbamoyl phosphate synthase small subunit [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 383
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 181/283 (63%), Gaps = 14/283 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES Q GL+IR L I SN+R ++L +YL NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSQIHAQGLIIRDLPILASNFRNQQSLSDYLKSHNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQEL-----LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + + + +++ LE +R++ + G+DL +V+ + + W E + W
Sbjct: 125 KGAQAGCIYAGKEVAGKQVDEAYALEQARAFPGLKGMDLAKEVTVSDAYAWTEGS---WQ 181
Query: 182 FN----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
T + Y V+AYDFG+K NILR L GC++ VVP+ PA+E L + PDG+
Sbjct: 182 LGKGHVTPAADELKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAKTPAAEVLAMNPDGIF 241
Query: 238 FSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L PVFGIC+GHQLLG A G
Sbjct: 242 LSNGPGDPEPCDYAIDAIKAFLNTNTPVFGICLGHQLLGLASG 284
>gi|357405160|ref|YP_004917084.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit (carbamoyl-phosphate synthetase glutamine chain)
[Methylomicrobium alcaliphilum 20Z]
gi|351717825|emb|CCE23490.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit (Carbamoyl-phosphate synthetase glutamine chain)
[Methylomicrobium alcaliphilum 20Z]
Length = 377
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 181/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++ S G G VGEVVFNTSLTGYQEIL+DPSYA Q V +T PHIGN G
Sbjct: 5 ALLVLEDGSVFNGVSIGVDGCSVGEVVFNTSLTGYQEILSDPSYARQIVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D+ES +GLVIR+L + SNWRC +TL YL +RN++ I ++DTR +TR LR
Sbjct: 65 TNMEDDESSSVCASGLVIRNLPLQASNWRCEKTLQEYLIDRNVVAIAEIDTRKLTRLLRD 124
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G V++ + + + ++ + G+DL V+ + +EW E WD +
Sbjct: 125 KGAQRGAVIAGDNADVEIAKKAIAAFPGLKGMDLAKIVTVDKSYEWTEDV---WDLDKGY 181
Query: 187 RNSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+++ T V+A+DFGIK NILR LA+ GC++ VVP+ PA + L + PDGV SNGPGD
Sbjct: 182 QSATNLTKHVVAFDFGIKRNILRLLANRGCRVTVVPAQTPAEKVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+ +K++L KVPVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIEAIKKILDTKVPVFGICLGHQLLALASG 277
>gi|118580939|ref|YP_902189.1| carbamoyl phosphate synthase small subunit [Pelobacter propionicus
DSM 2379]
gi|118503649|gb|ABL00132.1| carbamoyl-phosphate synthase small subunit [Pelobacter propionicus
DSM 2379]
Length = 373
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 176/277 (63%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG I+ KSFGA G GEVVFNT++TGYQE+LTDPSY GQ V MT IGNT
Sbjct: 2 KALLALADGRIFEGKSFGAGGEARGEVVFNTAMTGYQEVLTDPSYKGQMVTMTYTQIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ESR FL+G ++R SNWR +L +YL E ++GI +DTRA+TR LR
Sbjct: 62 GINAEDIESRGLFLSGFIVREYQECYSNWRACMSLDSYLKENGVIGIQGIDTRALTRHLR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G++ST + + + + + G+DL + VS +P+ W E WD
Sbjct: 122 DKGAQNGIISTIDLDRESLVAKARAIPSMAGLDLATGVSCDKPYHWTEGL---WDLKDGY 178
Query: 186 ---ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ + Y+V+AYDFGIK+NILR L GC + VVP+++PA E L + PDGV SNGP
Sbjct: 179 PQVDPVTLKYKVVAYDFGIKYNILRCLVDAGCDVTVVPASFPAEEALAMNPDGVFLSNGP 238
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + +++++G+ P+FGIC+GHQLLG ALG
Sbjct: 239 GDPEPLVAVQEEIRKMIGRKPIFGICLGHQLLGLALG 275
>gi|389796669|ref|ZP_10199720.1| carbamoyl phosphate synthase small subunit [Rhodanobacter sp.
116-2]
gi|388448194|gb|EIM04179.1| carbamoyl phosphate synthase small subunit [Rhodanobacter sp.
116-2]
Length = 378
Score = 263 bits (672), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 177/274 (64%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 ALLALEDGSLFHGYAVGAVGETVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES AGL++R + S+WR E+L +YL + I +DTR +TR LR
Sbjct: 65 VNAEDVESTAVHAAGLIVRDVPRRASSWRSTESLPDYLRRHGTVAIAGIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G + E + L +R++ + G+DL VS P+ W + D D
Sbjct: 125 KGALAGCIVAGEQVDAETALAKARAFPGLNGMDLAKVVSTARPYVWKQGVY-DLDRTAFN 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + ++V+AYDFG K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+
Sbjct: 184 QPATRFKVVAYDFGTKLNILRLLAEQGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPA 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
A YA+A ++ L K+P+FGIC+GHQL+G ALG
Sbjct: 244 ACDYAIAATRQFLDAKIPLFGICLGHQLMGLALG 277
>gi|406831427|ref|ZP_11091021.1| carbamoyl phosphate synthase small subunit [Schlesneria paludicola
DSM 18645]
Length = 391
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 182/277 (65%), Gaps = 2/277 (0%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A+L L DG+++ +FGA+G GEV FNTS+TGYQEILTDPSY GQ V MT P IG
Sbjct: 18 LPSAKLALADGTVYSGTAFGATGEVFGEVCFNTSMTGYQEILTDPSYCGQIVAMTYPLIG 77
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N GVN +D ESR + G ++R L SN+R +TL +YL + N++GI +DTR++ RR
Sbjct: 78 NYGVNTEDVESRGLSIRGFIVRELCRQPSNFRSTDTLDSYLRKANVVGIEGIDTRSLVRR 137
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
LR G++ GVLS+ + + + S IVG DL+++V+ +PF W E T
Sbjct: 138 LRIRGAMTGVLSSTDLDDASLINKAQSSPSIVGQDLVAEVTPAKPFNWSEGLSDLGASGT 197
Query: 185 HERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
++ T V+A D+G+K NILR L + C++ VVP+T A+E L LKPDGV SNGP
Sbjct: 198 SLVSTDTPERHVVAIDYGMKWNILRHLKAINCRVTVVPATTTAAEVLALKPDGVFLSNGP 257
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + YA+ +++LLG VP+FGIC+GHQLLG A G
Sbjct: 258 GDPRPLKYAIDTIRDLLGNVPIFGICLGHQLLGMACG 294
>gi|89095226|ref|ZP_01168149.1| Carbamoyl-phosphate synthase, small subunit [Neptuniibacter
caesariensis]
gi|89080523|gb|EAR59772.1| Carbamoyl-phosphate synthase, small subunit [Oceanospirillum sp.
MED92]
Length = 395
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 139/277 (50%), Positives = 177/277 (63%), Gaps = 8/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI++ + GA G GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 23 AILALEDGSIFKGLAIGADGLSSGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNTG 82
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + ++AGLVIR L + SN+R + L YL + NI+GI D+DTR +TR LR+
Sbjct: 83 TNSEDEESSRTWVAGLVIRDLPLVASNFRNEKNLDQYLKDNNIVGIADIDTRRLTRLLRE 142
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-HE 186
GSL G + E + L E + G+DL V+ + +EW ST W HE
Sbjct: 143 KGSLNGCIMAGEIDESKALDEAKAFPGLKGMDLAQVVTTESTYEWNSST---WQLGAGHE 199
Query: 187 RNS---KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYD+G+K NILR L GC+I VVP+ PASE L L PDGV SNGPG
Sbjct: 200 DKNPSDQEFHVVAYDYGVKRNILRMLVERGCKITVVPAKTPASEVLALNPDGVFLSNGPG 259
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP YA+ ++E+ +PVFGIC+GHQLL A G
Sbjct: 260 DPEPCDYAIEAIQEICKTDLPVFGICLGHQLLALASG 296
>gi|410629666|ref|ZP_11340363.1| carbamoyl-phosphate synthase small subunit [Glaciecola arctica
BSs20135]
gi|410150836|dbj|GAC17230.1| carbamoyl-phosphate synthase small subunit [Glaciecola arctica
BSs20135]
Length = 381
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 138/284 (48%), Positives = 187/284 (65%), Gaps = 15/284 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GASG VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGASGVSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES + + GL+IR L + SN+R ++L +YL E NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDCESNKIWAKGLIIRDLPLLLSNFRSEQSLSDYLEENNILGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQEL-----LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
G+ G + + D L L ++++ + G+DL +V+ E ++W + + W
Sbjct: 124 DKGAQNGCIIASNTLDDIPLDESVALAKAQAFSGLKGLDLAKEVTCDESYQWTDGS---W 180
Query: 181 ----DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ T+ N K + V+AYDFG+K NILR LA GC++ VVP+ A E L LKPDGV
Sbjct: 181 VLGEGYQTNLDNPK-FHVVAYDFGVKRNILRMLADRGCKLTVVPAKTTADEVLALKPDGV 239
Query: 237 LFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+LL +P+FGIC+GHQLL A G
Sbjct: 240 FLSNGPGDPEPCNYAITAIKQLLETNIPIFGICLGHQLLALASG 283
>gi|443473734|ref|ZP_21063756.1| Carbamoyl-phosphate synthase small chain [Pseudomonas
pseudoalcaligenes KF707]
gi|442904608|gb|ELS29585.1| Carbamoyl-phosphate synthase small chain [Pseudomonas
pseudoalcaligenes KF707]
Length = 378
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 184/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGHTIGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGL+IR L + +SNWR + L YL E + I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWAAGLIIRDLPLLSSNWRNKQPLPEYLKEHGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + ++++ LE++RS+ + G+DL +V+ E +EW S W+ ++
Sbjct: 125 KGSQNGCILAGADATEEKALELARSFPGLKGMDLAKEVTSAEAYEWRSSV---WNLESDS 181
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + + Y V+AYD+G+K NILR L + GC++ VVP+ PA + L L PDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKLNILRMLVARGCRLTVVPAKTPAKDVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+A +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIAAIKEILETEIPVFGICLGHQLLALASG 280
>gi|395797966|ref|ZP_10477253.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. Ag1]
gi|421140208|ref|ZP_15600228.1| carbamoyl phosphate synthase small subunit [Pseudomonas fluorescens
BBc6R8]
gi|395337958|gb|EJF69812.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. Ag1]
gi|404508600|gb|EKA22550.1| carbamoyl phosphate synthase small subunit [Pseudomonas fluorescens
BBc6R8]
Length = 378
Score = 263 bits (671), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKETYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+GIKHNILR L GC++ VVP+ PA++ L L+PDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGIKHNILRMLVERGCRVTVVPAQTPANDVLALQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|167836212|ref|ZP_02463095.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis MSMB43]
Length = 381
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMASTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW +S +W +
Sbjct: 128 KGAQNGCILT-GSDDESKALALARSFPGLAGMDLAKVVSTAKPFEWKQS---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A+E L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVTVLPAQSSAAEALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|260914716|ref|ZP_05921181.1| carbamoyl-phosphate synthase [Pasteurella dagmatis ATCC 43325]
gi|260631220|gb|EEX49406.1| carbamoyl-phosphate synthase [Pasteurella dagmatis ATCC 43325]
Length = 385
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 178/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ KS GA G +GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFYGKSIGAKGHTIGEVVFNTSMTGYQEILTDPSYFKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES + AGL+IR L + SN+R +L +YL N++ I D+DTR +TR LR
Sbjct: 65 ANQEDCESNSVYAAGLIIRDLPLLHSNFRSEVSLSDYLQTNNVVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T E + LE+++S+ + G DL +V+ + F W + +W
Sbjct: 125 KGAQAGCIMTGE-IDEVRALELAKSFGSMAGKDLAQEVTSNDSFSW---SSGEWRLGKGF 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + ++AYDFGIKHNILR LA GC+I VVP+ PA++ L L PDG+ SNGPGD
Sbjct: 181 VEQTQPEFNIVAYDFGIKHNILRMLAERGCRITVVPAKTPAAQVLSLNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ +K LL K P+FGIC+GHQLL A G
Sbjct: 241 PEPCDYAISAIKTLLASKKPIFGICLGHQLLALAAG 276
>gi|419954423|ref|ZP_14470561.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
TS44]
gi|387968756|gb|EIK53043.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
TS44]
Length = 382
Score = 262 bits (670), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+RQ + AGLVIR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAEARQVWAAGLVIRDLPLLASNWRNKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL VS E +EW S WD T
Sbjct: 129 KGAQDGCILAGADATEEKALELARSFPGLKGMDLAKVVSTTERYEWRSSV---WDLKTDS 185
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC+I V+P+ PASE L LKPDG+ +NG
Sbjct: 186 HPEIPAAELPYHVVAYDYGMKLNILRMLVARGCRITVLPAQTPASEALALKPDGIFLANG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIKAIQDILETDIPVFGICLGHQLLALASG 284
>gi|254482538|ref|ZP_05095777.1| carbamoyl-phosphate synthase, small subunit [marine gamma
proteobacterium HTCC2148]
gi|214037229|gb|EEB77897.1| carbamoyl-phosphate synthase, small subunit [marine gamma
proteobacterium HTCC2148]
Length = 379
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 190/278 (68%), Gaps = 5/278 (1%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
++A LVLEDGS+++ + GASG VGEVVFNT+++GYQEILTDPSYA Q V +T PHIGN
Sbjct: 3 SSAILVLEDGSVFKGLAIGASGISVGEVVFNTAMSGYQEILTDPSYARQIVTLTYPHIGN 62
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
TG N +DEES + AGLVIR L + SN+R ++L +YL+ RNI+GI D+DTR +TR L
Sbjct: 63 TGTNTEDEESSSIWAAGLVIRDLPLLASNYRNEQSLSDYLSSRNIVGIADIDTRRLTRIL 122
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
R+ G+ G L ++ + + L ++++ + G+DL +V+ E + W E + +W
Sbjct: 123 REKGAQNGCLMAGDNIDEAKALAQAKAFAGLKGMDLAKEVTVTESYRWTEGSW-EWGQGH 181
Query: 185 HERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
E+ + + V+A+D+G+K NILR L GC++ VVP+ PA++ L + PDG+ SNGP
Sbjct: 182 SEKPAGELPWHVVAFDYGVKRNILRMLVDRGCRLTVVPAQTPAADVLAMNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ ++ELL ++P+FGIC+GHQLL A G
Sbjct: 242 GDPEPCTYAIEAIQELLKTEIPIFGICLGHQLLALASG 279
>gi|422650880|ref|ZP_16713680.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330963963|gb|EGH64223.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 378
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLGDYLKASNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS KE +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKETYEWRHSV---WNLQTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKQVLETEVPVFGICLGHQLLALAAG 280
>gi|238918632|ref|YP_002932146.1| carbamoyl-phosphate synthase, small subunit, putative [Edwardsiella
ictaluri 93-146]
gi|238868200|gb|ACR67911.1| carbamoyl-phosphate synthase, small subunit, putative [Edwardsiella
ictaluri 93-146]
Length = 385
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/285 (47%), Positives = 183/285 (64%), Gaps = 13/285 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRSIGADGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GL++R L SN+RC ETL +YL ++ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSTVHAQGLIVRDLPPIASNFRCQETLPDYLRRHRVVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQE---LLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
LR+ G++ G + T E+ S+ + LE +R++ + G+DL +V+ KE + W + + W
Sbjct: 122 LREKGAMNGCIVTAENGSEPDAALALEKARAFPGLKGMDLAKEVTTKEAYRWCQGS---W 178
Query: 181 DFN-----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+ + Y V+AYDFG+K NILR L GC++ VVP+ PA + L L PDG
Sbjct: 179 TLSGGLPAPRDDAELPYHVVAYDFGVKRNILRMLVDRGCRLTVVPAQTPAQDVLALDPDG 238
Query: 236 VLFSNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
+ SNGPGDP+ YA+ AI L G++P+FGIC+GHQLL A G
Sbjct: 239 IFLSNGPGDPAPCDYAIEAIATFLRGEIPLFGICLGHQLLALASG 283
>gi|374704240|ref|ZP_09711110.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. S9]
Length = 382
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 9 AILALADGSIFRGEAIGADGHTIGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGL+IR L + SNWR ++L +YL E + I ++DTR +TR LR+
Sbjct: 69 TTPEDAESNRVWAAGLIIRDLPLIASNWRNKQSLPDYLKENGTVAIANIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + + ++++ LE++RS+ + G+DL VS E +EW + W+ T
Sbjct: 129 KGSQNGCILVGDDATEEKALELARSFPGLKGMDLAKVVSCTEQYEWRSTV---WNLKTDS 185
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+A+D+G+K NILR L + GC++ VVP+ PASE L + PDGV SNG
Sbjct: 186 HAEVPASELPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLAMNPDGVFLSNG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIQAIKEVLETEIPVFGICLGHQLLALASG 284
>gi|424903991|ref|ZP_18327501.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis MSMB43]
gi|390929969|gb|EIP87371.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis MSMB43]
Length = 373
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 182/274 (66%), Gaps = 8/274 (2%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN GVN
Sbjct: 2 LALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVGVN 61
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR G
Sbjct: 62 AEDVEATKVHAAGLIVRDLPALASNFRMASTLGDYLRDEGVVAIAGIDTRKLTRILRDKG 121
Query: 130 SLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERN 188
+ G + T S + + L ++RS+ + G+DL VS +PFEW +S +W +
Sbjct: 122 AQNGCILT-GSDDESKALALARSFPGLAGMDLAKVVSTAKPFEWKQS---EWRLGSGYGM 177
Query: 189 SKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+T YRV+A+DFG+K+NILR LA GC + V+P+ A+E L L PDG+ SNGPGDP
Sbjct: 178 QETPRYRVVAFDFGVKYNILRMLAERGCHVTVLPAQSSAAEALALNPDGIFLSNGPGDPE 237
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 238 PCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 271
>gi|329893938|ref|ZP_08269973.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
IMCC3088]
gi|328923393|gb|EGG30710.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
IMCC3088]
Length = 377
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 185/274 (67%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LE+G ++R ++ GA+G+ VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALENGRVFRGEAIGATGSVVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE+ + GLVIR L + SN+R E L +YL NI+GI ++DTRA+T+ LR+
Sbjct: 65 CNSEDEEASAVWAQGLVIRDLPLLASNYRSEEDLASYLKRHNILGIAEIDTRALTQVLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G + T E+ ++ L ++++ + G+DL +V+ +E F W + W+ E
Sbjct: 125 QGALAGCIMTGENIDEEAALAQAKAFAGLKGMDLAQEVTTQETFAWTHGSWV-WNQGFSE 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+AYDFG K NILR L GC++ VVP+ PA+E L + PDGV SNGPGDP
Sbjct: 184 LQDERFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTPAAEVLTMNPDGVFLSNGPGDPE 243
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ ++++L +PVFGIC+GHQLLG A G
Sbjct: 244 PCTYAIEAIQQILKTDIPVFGICLGHQLLGLASG 277
>gi|389808145|ref|ZP_10204555.1| carbamoyl phosphate synthase small subunit [Rhodanobacter
thiooxydans LCS2]
gi|388443023|gb|EIL99182.1| carbamoyl phosphate synthase small subunit [Rhodanobacter
thiooxydans LCS2]
Length = 378
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/274 (49%), Positives = 178/274 (64%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++R + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 ALLALEDGSVFRGHAVGAPGETVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES AGL++R L S+WR E+L +YL + I +DTR +TR LR
Sbjct: 65 VNAEDAESTTVHAAGLIVRDLPRRASSWRSTESLSDYLKRHGTVAIAGIDTRRLTRILRD 124
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G +++ E+ +D L + + G+DL VS P+ W E D D
Sbjct: 125 KGALAGCIVAGEQVDADAALAKARAFPGLNGMDLAKVVSTAAPYVWKEGAY-DLDRTAFN 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + ++V+AYDFG K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+
Sbjct: 184 QPAMRFKVVAYDFGTKLNILRLLAEQGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPA 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
A YA+A + L K+P+FGIC+GHQL+G ALG
Sbjct: 244 ACDYAIAATGQFLEAKIPLFGICLGHQLMGLALG 277
>gi|224823858|ref|ZP_03696967.1| carbamoyl-phosphate synthase, small subunit [Pseudogulbenkiania
ferrooxidans 2002]
gi|224604313|gb|EEG10487.1| carbamoyl-phosphate synthase, small subunit [Pseudogulbenkiania
ferrooxidans 2002]
Length = 375
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 179/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG++++ + GA+G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 6 AILVLADGTLFKGSAIGAAGHTVGEVVFNTAITGYQEILTDPSYTKQIVTLTYPHIGNVG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR F AGL++R L + SN+R +L YL N++ I D+DTR +TR LR+
Sbjct: 66 ANAEDTESRAVFAAGLIVRDLPLLHSNFRAEASLSGYLKANNVVAIADIDTRKLTRILRE 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + E + LE++R + + G DL VS ++W T+ +W
Sbjct: 126 KGAQPGCIMAGEI-DEARALELARGFGTMAGQDLAKVVSCDSIYQW--DTR-EWRLGEGY 181
Query: 187 RNSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
R Y V+AYDFG+KHNILR LA GC++ VVP+ PA + L LKPDGV SNGPGD
Sbjct: 182 RAQAEPKYHVVAYDFGVKHNILRMLAERGCKLTVVPAQTPAKDVLALKPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+ +KE+L K+PVFGIC+GHQLLG A+G
Sbjct: 242 PEPCDYAIDAIKEILDTKLPVFGICLGHQLLGLAVG 277
>gi|284006379|emb|CBA71615.1| carbamoyl-phosphate synthase small chain [Arsenophonus nasoniae]
Length = 388
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 179/280 (63%), Gaps = 5/280 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A LVLEDG+ + S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKPAILVLEDGTQFHGHSIGAEGIVVGEVVFNTSITGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTG+N DDEES GLVI LS+ SN+R E+L +YL + I D+DTR +TR
Sbjct: 62 NTGINPDDEESAIIHAQGLVICDLSLIYSNFRGKESLSDYLKRHKTVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST---KPDW 180
LR+ G+ G + T ++ LE +S+ I G+DL +V+ K+ + W + + D
Sbjct: 122 LREKGAQNGCIITGDNLDVHLALEKIKSFGGITGLDLAKEVTTKDVYAWQQQSWHLAADG 181
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
T R Y V+AYDFG+K NILR L GC + VVP+T PA E LK+ PDG+ SN
Sbjct: 182 LSATKAREQLPYHVVAYDFGVKQNILRLLVDRGCYLTVVPATTPADEVLKMAPDGIFLSN 241
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP+A YA+ +K+ L ++PVFGIC+GHQLL A G
Sbjct: 242 GPGDPAACDYAINAIKQFLTTEIPVFGICLGHQLLALASG 281
>gi|425897468|ref|ZP_18874059.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397891577|gb|EJL08055.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 378
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLFASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ SD+ + +R + + G+DL VS KE +EW S W T
Sbjct: 125 KGAQNGCIMAGDNISDEAAIAAARGFPGLKGMDLAKVVSTKESYEWRSSV---WSLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L LKPDGV SNG
Sbjct: 182 HPTIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPASDVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|399004730|ref|ZP_10707339.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM17]
gi|398128870|gb|EJM18250.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM17]
Length = 378
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ SD+ + +R + + G+DL VS KE +EW S W T
Sbjct: 125 KGAQNGCIMAGDNISDEAAIAAARGFPGLKGMDLAKVVSTKESYEWRSSV---WSLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L LKPDGV SNG
Sbjct: 182 HPTIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPASDVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|374852422|dbj|BAL55355.1| carbamoyl phosphate synthase small subunit [uncultured gamma
proteobacterium]
Length = 369
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 179/274 (65%), Gaps = 7/274 (2%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+ LE G +++ S GA+G +VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTGVN
Sbjct: 1 MALETGVVFQGVSIGAAGFRVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTGVN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D E + AGLV++ + SNWR ETL YL + ++G+ +DTR +TR LR G
Sbjct: 61 SEDVECARIHAAGLVVKDVPPFPSNWRMTETLPEYLRRQGVVGLAGIDTRKLTRILRDQG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT--HE 186
+L G L QE + +R++ + G+DL +VS P+ W ++ W T E
Sbjct: 121 ALRGCLWAGPDLDAQEAIAKARAFPGLKGMDLAREVSCNAPYAWNQTR---WRLGTGYGE 177
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ YRV+ YDFG+K NILR LA GC++ VVP+T PA+E L L PDGVL SNGPGDP
Sbjct: 178 LDRPRYRVVVYDFGVKFNILRELAERGCEVTVVPATTPAAEVLDLAPDGVLLSNGPGDPE 237
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA++ +++LL VP+FGIC+GHQLL A G
Sbjct: 238 PCTYAISAIRKLLAAGVPIFGICLGHQLLALACG 271
>gi|56460089|ref|YP_155370.1| carbamoyl phosphate synthase small subunit [Idiomarina loihiensis
L2TR]
gi|56179099|gb|AAV81821.1| Carbamoylphosphate synthase small subunit [Idiomarina loihiensis
L2TR]
Length = 381
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R + GA G+ VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 12 AILVLADGTVFRGTAIGAEGSAVGEVVFNTAMTGYQEILTDPSYTEQIVTLTYPHIGNTG 71
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES Q + GL+IR L++ SN+R ETL YL N++GI D+DTR +TR LR+
Sbjct: 72 INSEDAESDQVWAKGLIIRDLAMKASNFRSEETLSAYLQRHNVVGIADIDTRRLTRILRE 131
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G + E ++ + + G+DL +V +P++W + + +T
Sbjct: 132 KGAQNGCIMVGELDENKAQELAQKFPGLKGMDLAKEVCCDKPYDWQGGSWQLGEGHTKPE 191
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+K Y V+AYD+G KHNILR LA C+I VVP+ A + L LKPDGV SNGPGDP
Sbjct: 192 QNK-YHVVAYDYGCKHNILRLLADRNCKITVVPAQTSAEDVLALKPDGVFLSNGPGDPEP 250
Query: 248 VPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 251 CDYAITAIKALLDKEIPIFGICLGHQLLAIASG 283
>gi|429744232|ref|ZP_19277736.1| carbamoyl-phosphate synthase, small subunit [Neisseria sp. oral
taxon 020 str. F0370]
gi|429163404|gb|EKY05633.1| carbamoyl-phosphate synthase, small subunit [Neisseria sp. oral
taxon 020 str. F0370]
Length = 404
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 179/279 (64%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ +S G G GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 32 ALLVLADGSVFHGRSIGYQGNASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 91
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D E + +GL+IR L + SN+R E+L +L + I D+DTR +TR LR
Sbjct: 92 INPEDVEGKAVHASGLIIRDLPLLGSNFRETESLQEFLVRNKTVAIADIDTRKLTRILRD 151
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW----DF 182
G+ G + T E + E+ ++ +VG DL +VS EP+EW E +W F
Sbjct: 152 KGAQAGAILTGEQADESHAKELIAAFGSMVGKDLAKEVSCSEPYEWTEG---EWVLGKGF 208
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + + Y V+AYD+G+K NILR LA+ GC++ VVP+ PA E L + PDGV SNGP
Sbjct: 209 VTPQE--QPYHVVAYDYGVKTNILRMLAARGCRLTVVPAQTPAKEVLAMNPDGVFLSNGP 266
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YAV+ VKELL GK PVFGIC+GHQLLG ALG
Sbjct: 267 GDPEMCDYAVSAVKELLDSGK-PVFGICLGHQLLGLALG 304
>gi|440722203|ref|ZP_20902586.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
BRIP34876]
gi|440725915|ref|ZP_20906175.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
BRIP34881]
gi|443642351|ref|ZP_21126201.1| Carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. syringae B64]
gi|440361732|gb|ELP98949.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
BRIP34876]
gi|440367802|gb|ELQ04857.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
BRIP34881]
gi|443282368|gb|ELS41373.1| Carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. syringae B64]
Length = 378
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +RS+ + G+DL +V KE +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARSFPGLKGMDLAKEVCTKETYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|359783698|ref|ZP_09286909.1| carbamoyl phosphate synthase small subunit [Pseudomonas
psychrotolerans L19]
gi|359368402|gb|EHK68982.1| carbamoyl phosphate synthase small subunit [Pseudomonas
psychrotolerans L19]
Length = 378
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGESIGADGHTVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D E+ Q + AGL+IR L + SNWR ++L +YL E + I +DTR +TR LR+
Sbjct: 65 TTPQDGEAAQVWAAGLIIRDLPLLASNWRNKQSLPDYLKENGTIAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T E +++ LE++R++ + G+DL +VS KE +EW W +T
Sbjct: 125 KGAQDGCILTGEDATEERALELARAFPGLKGMDLAKEVSVKERYEWRSGV---WSLDTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+A+D+G+K NILR L + GC+I V+P+ PASE L L+PDG+ +NG
Sbjct: 182 HAEIPAEQLPYHVVAFDYGVKLNILRMLVARGCRITVLPAQTPASEALALQPDGIFLANG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIQDVLETEIPVFGICLGHQLLALASG 280
>gi|374310270|ref|YP_005056700.1| carbamoyl-phosphate synthase small subunit [Granulicella mallensis
MP5ACTX8]
gi|358752280|gb|AEU35670.1| carbamoyl-phosphate synthase, small subunit [Granulicella mallensis
MP5ACTX8]
Length = 378
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 177/277 (63%), Gaps = 6/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG ++R K+FG+ +VGEVVFNTSLTGYQEI TDPSYAGQ V++TNPHIGN G
Sbjct: 3 AILALEDGRLFRGKAFGSQVERVGEVVFNTSLTGYQEIFTDPSYAGQIVILTNPHIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + ++ GLV+R S +SNWR E YL + I ++DTRA+ R LR
Sbjct: 63 TSPSDAEASRPYIEGLVVREFSPVSSNWRSTEVADEYLERNGVPVIAEIDTRAVVRHLRA 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP-----DWDF 182
+G + GV+ST +D + + + G DL S VS K + W +ST+P D+
Sbjct: 123 NGVMRGVISTAVEDTDALVAKARAHKKMDGTDLASVVSTKTSYTW-DSTEPRNETGDFLL 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T V+AYDFGIK NILR L+ C++ VVP+ A+E L L+PDG+ FSNGP
Sbjct: 182 PTDSGAVGQMHVVAYDFGIKQNILRMLSRENCRVTVVPAKTSAAEVLALEPDGIFFSNGP 241
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + YA +++L GK P+FGIC+GHQL G ALG
Sbjct: 242 GDPEPLEYAQQNIRDLQGKKPLFGICLGHQLFGLALG 278
>gi|95929150|ref|ZP_01311894.1| carbamoyl-phosphate synthase, small subunit [Desulfuromonas
acetoxidans DSM 684]
gi|95134648|gb|EAT16303.1| carbamoyl-phosphate synthase, small subunit [Desulfuromonas
acetoxidans DSM 684]
Length = 376
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 175/275 (63%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG ++ +S GA G GEVVFNTS++GYQEILTDPSY G+ V MT P IGN G
Sbjct: 3 AILALADGRVFHGQSIGAVGETFGEVVFNTSMSGYQEILTDPSYHGEIVTMTYPQIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + LAG V++ SNWR +L YL + NI+GI +DTRA+ + +R
Sbjct: 63 VNKEDVESDKPHLAGFVVKESCEFPSNWRSELSLNEYLQQNNIVGIQGIDTRALVKHIRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN---T 184
G+ GV+ST + D + + ++ +VG DL+ +V+ E + W + WD T
Sbjct: 123 HGAQTGVISTVDLDVDSLVEKARKAPGLVGRDLVKEVTTAESYTWTQGV---WDLEKGYT 179
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
Y V+AYDFGIK NILR L S GC++ VVP++ AS+ L L PDGV SNGPGD
Sbjct: 180 ELVEPARYHVVAYDFGIKRNILRNLVSAGCRVTVVPASTSASDVLALNPDGVFLSNGPGD 239
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P + YA +++LLGKVP+FGIC+GHQLL ALG
Sbjct: 240 PEPITYAQENIRQLLGKVPLFGICLGHQLLAIALG 274
>gi|308050595|ref|YP_003914161.1| carbamoyl-phosphate synthase small subunit [Ferrimonas balearica
DSM 9799]
gi|307632785|gb|ADN77087.1| carbamoyl-phosphate synthase small subunit [Ferrimonas balearica
DSM 9799]
Length = 382
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/281 (48%), Positives = 185/281 (65%), Gaps = 12/281 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL+DG+++R K+ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLQDGTVFRGKAIGANGSSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES GLVIR L SN+R ETL YL N++GI D+DTR +TR LR+
Sbjct: 65 TNAEDTESSAIHAMGLVIRDLPALASNFRNEETLSEYLKRHNVVGIADIDTRKLTRILRE 124
Query: 128 DGSLIG-VLSTEESKSD-QELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF-- 182
G+ G +L E++ ++ + L M++++ + G+DL +V+ E + W + + W
Sbjct: 125 KGAQAGCILVGEDNDANIADALGMAQAFPGLKGMDLAKEVTVSESYSWRQGS---WKLVG 181
Query: 183 ---NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ + Y+V+AYD+G+K NILR L GC + VVP+ PASE L + PDGV S
Sbjct: 182 GLPSDTPSEALKYKVVAYDYGVKQNILRMLVDRGCDVTVVPAQTPASEVLAMNPDGVFLS 241
Query: 240 NGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
NGPGDP YA+A + E+L ++PVFGIC+GHQLL A G
Sbjct: 242 NGPGDPEPCDYAIAAITEILNTEIPVFGICLGHQLLALASG 282
>gi|300715267|ref|YP_003740070.1| carbamoyl-phosphate synthase small subunit [Erwinia billingiae
Eb661]
gi|299061103|emb|CAX58210.1| Carbamoyl-phosphate synthase small chain [Erwinia billingiae Eb661]
Length = 390
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 179/281 (63%), Gaps = 9/281 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNSADEESSQVHAQGLVIRDLPLIASNFRNEEGLSEYLTRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ G+ G + ++ Q L+ ++++ + G+DL +V+ E + W++ + W
Sbjct: 131 LREKGAQNGCIIASDAPDAQLALQQAKAFPGLKGMDLAKEVTTSESYSWLQGS---WTLD 187
Query: 183 ---NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ + + V+AYD+G+K NILR L GC++ +VP+ PA E LK+ PDG+ S
Sbjct: 188 GLPDAKQEADLPFHVVAYDYGVKRNILRMLVDRGCRLTIVPAQTPAEEVLKMNPDGIFLS 247
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+A +K L VPVFGIC+GHQLL A G
Sbjct: 248 NGPGDPEPCDYAIAAIKAFLETDVPVFGICLGHQLLALASG 288
>gi|372489675|ref|YP_005029240.1| carbamoyl-phosphate synthase small subunit [Dechlorosoma suillum
PS]
gi|359356228|gb|AEV27399.1| carbamoyl-phosphate synthase, small subunit [Dechlorosoma suillum
PS]
Length = 382
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 174/274 (63%), Gaps = 5/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R + GA GT GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 10 ALLALADGTVFRGYAIGAEGTTSGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR F AGLVIR L I SNWR +TL +YL + ++ I +DTR +TR LR+
Sbjct: 70 CNAEDFESRANFAAGLVIRDLPIRASNWRIEQTLPDYLKQHGVVAIAGIDTRKLTRILRE 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G + + + L E + G+DL VS P+++ E +W +
Sbjct: 130 KGAQAGCIIAGVADEAKALAEARAFPGLAGMDLAKVVSVDSPYQFSEG---EWTLKGYAA 186
Query: 188 N-SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ ++V+AYD+G+K NILR LA+ GC + VVP+ PA+E LK KPDGV SNGPGDP
Sbjct: 187 APAAKFKVVAYDYGVKTNILRMLAARGCDVTVVPAQTPAAEVLKYKPDGVFLSNGPGDPE 246
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ ++E+L VP +GIC+GHQLL A G
Sbjct: 247 PCDYAITAIREILAAGVPTYGICLGHQLLALASG 280
>gi|387815590|ref|YP_005431080.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381340610|emb|CCG96657.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 376
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 186/276 (67%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGL+IR L + S+WR +L +YL NI+GI D+DTR +TR LR
Sbjct: 65 VNEEDVESDRIQAAGLIIRDLPLLASSWRNKGSLDDYLRSNNIVGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + E+ + + LE++ ++ + G+DL +V+ E ++W + +WD
Sbjct: 125 KGSQNGAIVAGENATAERALELANAFPGLKGMDLAKEVTCSEAYQW---NQAEWDLVNGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+R+ ++V+A+D+G+K+NILR LA+ GC+I VVP+ PAS+ L +KPDG+ SNGPGD
Sbjct: 182 SDRSEDRFKVVAWDYGVKYNILRMLAARGCEITVVPAQTPASDVLAMKPDGIFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIKAIQEVLETEIPVFGICLGHQLLALASG 277
>gi|109898532|ref|YP_661787.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas
atlantica T6c]
gi|109700813|gb|ABG40733.1| carbamoyl-phosphate synthase small subunit [Pseudoalteromonas
atlantica T6c]
Length = 381
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 184/283 (65%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGATGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + + GL+IR L + SN+R ++L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDCESTKVWAKGLIIRDLPLLASNFRSEQSLSEYLRVNNILGIADIDTRRLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G +I V S+ E D+EL LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 DKGAQNGCIIAVDSSSEITLDKELALEKAKAFSGLKGLDLAKEVTTDEVYSWTDGS---W 180
Query: 181 DFNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+T + V+AYDFG KHNILR L GC++ VVP+ A + L L PDGV
Sbjct: 181 TLGQGFNEKQTDLPFHVVAYDFGAKHNILRMLVDRGCRLTVVPAKTTAEDVLALNPDGVF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 241 LSNGPGDPEPCVYAIEAIKTLLDKNLPIFGICLGHQLLALASG 283
>gi|443475576|ref|ZP_21065521.1| carbamoyl-phosphate synthase, small subunit [Pseudanabaena biceps
PCC 7429]
gi|443019584|gb|ELS33653.1| carbamoyl-phosphate synthase, small subunit [Pseudanabaena biceps
PCC 7429]
Length = 411
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/274 (46%), Positives = 183/274 (66%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ +R +FGASGT +GEVVFNT +TGYQE++TDPSY GQ V T P +GNTG
Sbjct: 28 AILVLADGTCYRGYAFGASGTAIGEVVFNTGMTGYQEVMTDPSYRGQIVTFTCPELGNTG 87
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D+ES + + G++ R+++ SNWR ++L +YL N++GI +DTRA+TR+LR
Sbjct: 88 INPEDDESDRPQVRGIIARNITAVPSNWRSRQSLPDYLKAHNVVGIAGIDTRALTRKLRS 147
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF-NTHE 186
G++ G +STE + L ++ + + G +L + S + +EW E T P+W+F +
Sbjct: 148 LGAMNGGISTEILDPEVLLAQVKAAPSMQGQNLAQEASTTKIYEWAEKTLPEWEFIEPSQ 207
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ V+A DFG+K NILRRLASYGC++IVVP+ + L PDG+ SNGPGDP+
Sbjct: 208 LTGEGLTVVAIDFGVKRNILRRLASYGCRVIVVPADTTPEKILSYNPDGIFLSNGPGDPA 267
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
AV + K LL P+FGIC+GHQ+LG ++G
Sbjct: 268 AVMQGIETAKALLSADKPMFGICLGHQILGLSMG 301
>gi|22298302|ref|NP_681549.1| carbamoyl phosphate synthase small subunit [Thermosynechococcus
elongatus BP-1]
gi|31562997|sp|Q8DKU5.1|CARA_THEEB RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|22294481|dbj|BAC08311.1| carbamoyl phosphate synthase small chain [Thermosynechococcus
elongatus BP-1]
Length = 382
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 5 ALLVLADGSVFRGFSFGAPGTAIGEVVFNTGMTGYQEVLTDPSYYGQIVTFTYPELGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D+ES + + G V R++ SNWR ++L +YL I IY +DTRA+TR++R
Sbjct: 65 TTPEDDESDRPQVRGAVARNICDIPSNWRSQQSLPDYLKAHRIPAIYGIDTRALTRKIRT 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +STE + L ++ + + G +L V+ + P+EW E T W+F
Sbjct: 125 VGAMNGGISTEILDPVELLQKVLAAPSMQGQNLAKVVTTRTPYEWTEPTPAAWEFRPQTA 184
Query: 188 NSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ V+A DFG+K NILRRLASYGC++IVVP+ PA L PDG+ SNGPGDP+
Sbjct: 185 TEEPPLTVVAIDFGVKRNILRRLASYGCRVIVVPADTPAETILSYDPDGIFLSNGPGDPA 244
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
AV + ++LLG + P+FGIC+GHQLLG +LG
Sbjct: 245 AVQEGIETTRKLLGAQRPMFGICLGHQLLGLSLG 278
>gi|70734325|ref|YP_257965.1| carbamoyl phosphate synthase small subunit [Pseudomonas protegens
Pf-5]
gi|68348624|gb|AAY96230.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas protegens
Pf-5]
Length = 378
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKESYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPASDVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEILETEIPVFGICLGHQLLALASG 280
>gi|28198315|ref|NP_778629.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
Temecula1]
gi|386084475|ref|YP_006000757.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|417558863|ref|ZP_12209822.1| Carbamoylphosphate synthase small subunit [Xylella fastidiosa
EB92.1]
gi|31562991|sp|Q87EB9.1|CARA_XYLFT RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|28056385|gb|AAO28278.1| carbamoyl-phosphate synthase small chain [Xylella fastidiosa
Temecula1]
gi|307579422|gb|ADN63391.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|338178445|gb|EGO81431.1| Carbamoylphosphate synthase small subunit [Xylella fastidiosa
EB92.1]
Length = 374
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA+G VGEVVFNT+LTGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 HAILVLEDGTVFEGDAVGANGLSVGEVVFNTALTGYQEILTDPSYAYQLVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G D+E+ + + AGL++R + SNWR +L ++LA R ++ I +DTR +TR LR
Sbjct: 64 GCTDQDDEANKVWAAGLIVRDVPRRPSNWRSQISLSDWLAARGVVAIAGIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G+ G L E + + I G+DL VS K+ + W E + D D N +
Sbjct: 124 EKGAQHGALMAGEIDVGKAQDAAHQFAGIKGMDLAKVVSTKQGYSWYEG-QLDLDRNECK 182
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R + Y+V+AYD+G+K NILR LA GC + VVP+ PA E L L PDGV SNGPGDP
Sbjct: 183 RAAPQYKVVAYDYGVKLNILRMLAERGCDLTVVPAQTPADEVLALCPDGVFLSNGPGDPE 242
Query: 247 AVPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
YAVA +K ++ +VP+FGIC+GHQLL QA+G
Sbjct: 243 PCDYAVAAIKTFIMRRVPIFGICLGHQLLAQAVG 276
>gi|312173565|emb|CBX81819.1| carbamoyl-phosphate synthase small chain [Erwinia amylovora ATCC
BAA-2158]
Length = 391
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q AGLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNSSDEESTQVHAAGLVIRDLPLIASNYRNEEGLSEYLTRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E+ LE +R++ + G+DL +V+ + + W++ + W
Sbjct: 131 LREKGAQNGCIIAGEAPDAAVALEKARTFPGLKGMDLAKEVTTPDAYTWLQGS---WTLE 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T +K Y V+AYD+G+K NILR L GC++ VVP+ A E LKL PDGV
Sbjct: 188 TALPTAKAEGELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTSAEEVLKLNPDGVFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ + LL +P+FGIC+GHQLL A G
Sbjct: 248 SNGPGDPEPCDYAITAINRLLETNIPLFGICLGHQLLALASG 289
>gi|584877|sp|P38099.1|CARA_PSEST RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|451655|gb|AAA19049.1| carbamoyl phosphate synthetase light subunit [Pseudomonas stutzeri]
Length = 384
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D ES + + AGLVIR L + SNWR ++L +YL E + + I +DTR +TR LR+
Sbjct: 69 TTPQDAESWKVWAAGLVIRDLPLLASNWRNKQSLPDYLKENDTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S W+ T
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKERYEWRYSL---WNLETDS 185
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NG
Sbjct: 186 HPEIPASELPYHVVAYDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIRAIQEVLETDIPVFGICLGHQLLALASG 284
>gi|397688176|ref|YP_006525495.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
DSM 10701]
gi|395809732|gb|AFN79137.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
DSM 10701]
Length = 382
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D ES + + AGLVIR L + SNWR ++L +YL E + + I +DTR +TR LR+
Sbjct: 69 TTPQDAESWKVWAAGLVIRDLPLLASNWRNKQSLPDYLKENDTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S W+ T
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKERYEWRYSL---WNLETDS 185
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NG
Sbjct: 186 HPEIPASELPYHVVAYDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIRAIQEVLETDIPVFGICLGHQLLALASG 284
>gi|322419239|ref|YP_004198462.1| carbamoyl-phosphate synthase small subunit [Geobacter sp. M18]
gi|320125626|gb|ADW13186.1| carbamoyl-phosphate synthase, small subunit [Geobacter sp. M18]
Length = 374
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 175/276 (63%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG I++ K+FGA+G GEVVFNT+++GYQE+LTDPSY GQ V MT IGNTG
Sbjct: 3 AVLALADGRIFKGKAFGATGETSGEVVFNTAMSGYQEVLTDPSYKGQMVTMTYTQIGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES Q +L+G ++R SN+R +L YL E ++GI +DTRA+TR LR
Sbjct: 63 INPEDIESNQLYLSGFIVREYLDCYSNYRATMSLDAYLKENGVVGIQGIDTRALTRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G+ G++ST + + + + G+DL + VS P+ W + WD T
Sbjct: 123 KGAQNGIISTIDFDPESLARKARAIPSMSGLDLATGVSCSAPYHWTQGL---WDLQTGYP 179
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
++ Y+V+AYDFGIK NILR L S GC + VVP+T+PA L + PDG+ SNGPG
Sbjct: 180 QVDKRDLKYKVVAYDFGIKLNILRCLVSAGCDVTVVPATFPAESALAMNPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP + + +K+ +GK P+FGIC+GHQLLG ALG
Sbjct: 240 DPEPMKEVIENIKKFVGKKPIFGICLGHQLLGLALG 275
>gi|28871636|ref|NP_794255.1| carbamoyl-phosphate synthase small subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213966659|ref|ZP_03394810.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. tomato T1]
gi|301383169|ref|ZP_07231587.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. tomato Max13]
gi|302063396|ref|ZP_07254937.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. tomato K40]
gi|302133769|ref|ZP_07259759.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|31562992|sp|Q87WP3.1|CARA_PSESM RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|28854888|gb|AAO57950.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213928509|gb|EEB62053.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. tomato T1]
Length = 378
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRHSV---WNLQTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKQVLETEVPVFGICLGHQLLALAAG 280
>gi|386835375|ref|YP_006240693.1| carbamoyl-phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. 3480]
gi|385202079|gb|AFI46934.1| carbamoyl-phosphate synthase, small subunit [Pasteurella multocida
subsp. multocida str. 3480]
Length = 385
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 177/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGSSIGAKGHTVGEVVFNTAMTGYQEILTDPSYFRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D E+ + +GL+IR L + SN+R + +L +YL N++ I D+DTR +TR LR
Sbjct: 65 TNLEDCEANHVYASGLIIRDLPLLHSNFRSSMSLRDYLQTHNVVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T E + + LE+++S+ + G DL +VS E F W T W
Sbjct: 125 KGAQAGCIMTGE-IDEAKALELAKSFGSMAGKDLAQEVSTGEIFTW---TSGQWQLGKGF 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYDFG+KHNILR LA GC+I VVP+ A + L L PDG+ SNGPGD
Sbjct: 181 IEQTQAEFNVVAYDFGVKHNILRMLAERGCKITVVPAKTSAEQVLALNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ ++ LL K P+FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISTIQTLLASKKPIFGICLGHQLLGLAAG 276
>gi|124023279|ref|YP_001017586.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9303]
gi|123963565|gb|ABM78321.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. MIT 9303]
Length = 379
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 184/275 (66%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL DG++ ++FG G +GEVVFNT +TGYQE+LTDPSY+GQ V T P +GNT
Sbjct: 8 SALLVLADGTVLEGEAFGHRGAAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFTYPELGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DD+ES + G++ R LS S+WRC ++L +L E+ ++GI VDTRA+ R LR
Sbjct: 68 GVNLDDQESSRPHARGVIARQLSPTPSSWRCQQSLQTWLEEQRVVGISGVDTRALVRHLR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G++ GV+S++ S Q + + ++ + G++L VS K+P+ W + +D
Sbjct: 128 EVGAMNGVISSDGSTPKQLMELLQQAPSMEGLNLADQVSTKDPYSWRSTCAVGFDQRLKR 187
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
YRV+A DFGIK IL RL ++GC++ V+P++ + L +P+GV SNGPGDP+
Sbjct: 188 HIDSPYRVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLSNGPGDPA 247
Query: 247 AVPYAVAIVKELLGKV--PVFGICMGHQLLGQALG 279
AV +A+VK+LL KV P+FGIC+GHQ++G A+G
Sbjct: 248 AVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMG 282
>gi|378775354|ref|YP_005177597.1| carbamoyl-phosphate synthase small subunit [Pasteurella multocida
36950]
gi|421264257|ref|ZP_15715256.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. P52VAC]
gi|425064224|ref|ZP_18467349.1| Carbamoyl-phosphate synthase small chain [Pasteurella multocida
subsp. gallicida X73]
gi|356597902|gb|AET16628.1| carbamoyl-phosphate synthase small chain [Pasteurella multocida
36950]
gi|401688483|gb|EJS84066.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. P52VAC]
gi|404381398|gb|EJZ77872.1| Carbamoyl-phosphate synthase small chain [Pasteurella multocida
subsp. gallicida X73]
Length = 385
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 177/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGSSIGAKGHTVGEVVFNTAMTGYQEILTDPSYFRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D E+ + +GL+IR L + SN+R + +L +YL N++ I D+DTR +TR LR
Sbjct: 65 TNLEDCEANHVYASGLIIRDLPLLHSNFRSSMSLRDYLQTHNVVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T E + + LE+++S+ + G DL +VS E F W T W
Sbjct: 125 KGAQAGCIMTGE-IDEAKALELAKSFGSMAGKDLAQEVSTGEIFTW---TSGQWQLGKGF 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYDFG+KHNILR LA GC+I VVP+ A + L L PDG+ SNGPGD
Sbjct: 181 IEQTQAEFNVVAYDFGVKHNILRMLAERGCKITVVPAKTSAEQVLALNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ ++ LL K P+FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISAIQTLLASKKPIFGICLGHQLLGLAAG 276
>gi|182680954|ref|YP_001829114.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa M23]
gi|182631064|gb|ACB91840.1| carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
M23]
Length = 399
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/274 (48%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA+G VGEVVFNT+LTGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 29 HAILVLEDGTVFEGDAVGANGLSVGEVVFNTALTGYQEILTDPSYAYQLVTLTYPHIGNT 88
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G D+E+ + + AGL++R + SNWR +L ++LA R ++ I +DTR +TR LR
Sbjct: 89 GCTDQDDEANKVWAAGLIVRDVPRRPSNWRSQISLSDWLAARGVVAIAGIDTRKLTRILR 148
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G+ G L E + + I G+DL VS K+ + W E + D D N +
Sbjct: 149 EKGAQHGALMAGEIDVGKAQDAAHQFAGIKGMDLAKVVSTKQGYSWYEG-QLDLDRNECK 207
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R + Y+V+AYD+G+K NILR LA GC + VVP+ PA E L L PDGV SNGPGDP
Sbjct: 208 RAAPQYKVVAYDYGVKLNILRMLAERGCDLTVVPAQTPADEVLALCPDGVFLSNGPGDPE 267
Query: 247 AVPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
YAVA +K ++ +VP+FGIC+GHQLL QA+G
Sbjct: 268 PCDYAVAAIKTFIMRRVPIFGICLGHQLLAQAVG 301
>gi|399521928|ref|ZP_10762593.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399109963|emb|CCH39153.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 382
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 9 AILALADGSIFRGDSIGADGQTIGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + AGL+IR L + +SNWR + L YL E + I +DTR +TR LR+
Sbjct: 69 TTPEDAESCSVWAAGLIIRDLPLISSNWRDKQPLDEYLKENGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + + ++++ LE++RS+ + G+DL +V+ +P+EW S W+ ++
Sbjct: 129 KGSQNGCILVGDDATEEKALELARSFPGLKGMDLAKEVTCDKPYEWRSSV---WNLESDS 185
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + Y V+AYD+G+K NILR L + GC++ VVP+ PAS+ L L PDGV SNG
Sbjct: 186 HPEIAAADLPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASDVLALNPDGVFLSNG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L +PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIQAIKEVLETDIPVFGICLGHQLLALASG 284
>gi|398891859|ref|ZP_10645133.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM55]
gi|398186416|gb|EJM73792.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM55]
Length = 378
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKESYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA+E L LKPDGV SNG
Sbjct: 182 HATLEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAAEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|338998866|ref|ZP_08637527.1| carbamoyl-phosphate synthase small subunit [Halomonas sp. TD01]
gi|338764248|gb|EGP19219.1| carbamoyl-phosphate synthase small subunit [Halomonas sp. TD01]
Length = 381
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 186/282 (65%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILALEDGSVFHGIAIGAEGATSGEVVFNTAMTGYQEILTDPSYTRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES AGLVIR L + S++R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 65 INSEDVESASIAAAGLVIRDLPLLASSFRSEQSLSDYLKSQNVLGIADIDTRRLTRILRD 124
Query: 128 DGSLIG-VLSTEESKSD---QELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD- 181
G+ G +L+ E++ D + L ++++ + G+DL +VS KE +EW T+ +W
Sbjct: 125 KGAQNGAILAGAEAEGDDAVERALAAAKAFPGLKGMDLAKEVSCKEAYEW---TQGEWTL 181
Query: 182 ---FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ +N + Y V+AYDFG+K NILR LA+ GC++ VVP+ PA+E L + PDGV
Sbjct: 182 GEGYADTTKNERPYHVVAYDFGVKFNILRMLAARGCRLTVVPAQTPAAEVLAMNPDGVFL 241
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+NGPGDP YA+ ++E+L P+FGIC+GHQLL A G
Sbjct: 242 ANGPGDPEPCDYAIKAIQEVLETNTPIFGICLGHQLLALASG 283
>gi|385332819|ref|YP_005886770.1| carbamoyl-phosphate synthase small subunit [Marinobacter adhaerens
HP15]
gi|311695969|gb|ADP98842.1| carbamoyl-phosphate synthase small chain [Marinobacter adhaerens
HP15]
Length = 376
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 182/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGL+IR L + S+WR TL +YL NI+GI D+DTR +TR LR
Sbjct: 65 VNEEDVESDRIQAAGLIIRDLPLLASSWRSKGTLDDYLRSNNIVGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
GS G + E+ + + LE+++++ + G+DL +V+ + + W E+ +W
Sbjct: 125 KGSQNGAIVAGENATAERALELAKAFPGLKGMDLAKEVTSDKTWSWKET---EWTLEEGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
ER ++V+A+D+G+K NILR LAS GC I VVP+ PASE L + PDGV SNGPGD
Sbjct: 182 GEREESRFKVVAWDYGVKLNILRMLASRGCDITVVPAQTPASEVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAITAIKEVLETEIPVFGICLGHQLLALASG 277
>gi|256823600|ref|YP_003147563.1| carbamoyl-phosphate synthase small subunit [Kangiella koreensis DSM
16069]
gi|256797139|gb|ACV27795.1| carbamoyl-phosphate synthase, small subunit [Kangiella koreensis
DSM 16069]
Length = 388
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 175/276 (63%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++ S G G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 17 AILVLEDGSVFHGVSIGYEGHAVGEVVFNTAMTGYQEILTDPSYAKQMVTLTYPHIGNTG 76
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES + L+IR L + SN+R E+L +YL + I D+DTR +TR LR
Sbjct: 77 ANSEDVESTNLWAEALIIRDLPLLHSNYRSEESLSDYLKRHKKVAIADIDTRRLTRILRD 136
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+L G + E+ + LE+++ + + G+DL VS KE + W +ST W
Sbjct: 137 KGALSGCIIAGEAPDADKALELAKEFPGLKGMDLAKVVSTKESYTWQDST---WSLEEGY 193
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ ++V+AYDFG KHNILR L GC + VVP+ PASE L +KPDG+ SNGPGD
Sbjct: 194 GKLKEAKFKVVAYDFGAKHNILRMLVERGCDLTVVPAQTPASEVLAMKPDGIFLSNGPGD 253
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 254 PEPCDYAIKAIQEVLETNIPVFGICLGHQLLALASG 289
>gi|347541239|ref|YP_004848665.1| carbamoyl-phosphate synthase small subunit [Pseudogulbenkiania sp.
NH8B]
gi|345644418|dbj|BAK78251.1| carbamoyl-phosphate synthase, small subunit [Pseudogulbenkiania sp.
NH8B]
Length = 375
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 179/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG++++ + GA+G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 6 AILVLADGTLFKGSAIGAAGHTVGEVVFNTAITGYQEILTDPSYTKQIVTLTYPHIGNVG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR F AGL++R L + SN+R +L YL N++ I D+DTR +TR LR+
Sbjct: 66 ANAEDTESRAVFAAGLIVRDLPLLHSNFRAEASLSGYLKANNVVAIADIDTRKLTRILRE 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E + LE++R + + G DL VS ++W T+ +W
Sbjct: 126 KGAQPGCIMAGEI-DEARALELARGFGTMAGQDLAKVVSCDSIYQW--DTR-EWRLGEGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+AYDFG+KHNILR LA GC++ VVP+ PA + L LKPDGV SNGPGD
Sbjct: 182 GAQAEPKYHVVAYDFGVKHNILRMLAERGCKLTVVPAQTPAKDVLALKPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+ +KE+L K+PVFGIC+GHQLLG A+G
Sbjct: 242 PEPCDYAIDAIKEILDTKLPVFGICLGHQLLGLAVG 277
>gi|37524605|ref|NP_927949.1| carbamoyl phosphate synthase small subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|60389712|sp|Q7N8W2.1|CARA_PHOLL RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|36784029|emb|CAE12898.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 387
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 181/282 (64%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N GVN D+ES + GLVIR L + TSN+RC ETL +YL NI+ I D+DTR +TR
Sbjct: 62 NVGVNSVDKESLKVQAQGLVIRDLPLLTSNFRCEETLSDYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ GS G + + Q LE ++++ + G+DL +V+ K+ + W++ + W
Sbjct: 122 LREKGSQNGCIIAGKQIDAQVALEKAQAFPGLEGMDLAKEVTTKQIYPWLQGS---WKLA 178
Query: 183 ----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ Y V+AYDFG K NILR L GC++ VVP+ A + LKL PDG+
Sbjct: 179 GGLPEDKQEQDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ VK LL ++P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCGYAIDAVKTLLETEIPIFGICLGHQLLALASG 280
>gi|331007283|ref|ZP_08330485.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
IMCC1989]
gi|330418905|gb|EGG93369.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
IMCC1989]
Length = 398
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/280 (48%), Positives = 178/280 (63%), Gaps = 8/280 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R KS GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 19 AILVLADGSVFRGKSIGADGMTVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 78
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEE + + AGLVIR L + SN+R + L YL RNI+GI D+DTR +TR LR+
Sbjct: 79 VNQEDEECQSIWAAGLVIRDLPLLESNFRSKQALDVYLKTRNIVGIADIDTRRLTRLLRE 138
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD------IVGIDLISDVSGKEPFEW-VESTKPDW 180
G+ G + + + + L + + G+DL +VS KE + W + S K
Sbjct: 139 KGAQSGCILAGDHVAGKNLSDDDALAAAKAFSGLKGLDLAKEVSTKEAYRWDLGSWKLGS 198
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
F+ Y+V+AYD+G+K NILR L GC + VVP+ A + L + PDGV SN
Sbjct: 199 GFSQLAEQDAKYKVVAYDYGVKRNILRMLVDRGCDLTVVPAETSAQDVLDMHPDGVFLSN 258
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+A ++EL+ VP+FGIC+GHQLL A G
Sbjct: 259 GPGDPEPCDYAIAAIQELMAAGVPIFGICLGHQLLALASG 298
>gi|197118281|ref|YP_002138708.1| carbamoyl phosphate synthase small subunit [Geobacter bemidjiensis
Bem]
gi|197087641|gb|ACH38912.1| carbamyl-phosphate synthase, small subunit [Geobacter bemidjiensis
Bem]
Length = 374
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 175/276 (63%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG I++ K+FGA+G GEVVFNT+++GYQE+LTDPSY GQ V MT IGNTG
Sbjct: 3 AVLALADGRIFKGKAFGATGETSGEVVFNTAMSGYQEVLTDPSYKGQMVTMTYTQIGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES Q +L+G ++R SN+R +L YL E I+GI +DTRA+TR LR
Sbjct: 63 INPEDVESGQLYLSGFIVREYLDCYSNYRATMSLDAYLKENGIVGIQGIDTRALTRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G+ G++ST + + + + G+DL + V+ P+ W E WD +
Sbjct: 123 KGAQNGIISTIDFDPESLARKARAIPSMSGLDLATGVTCSAPYHWTEGL---WDLKSGYP 179
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+R Y+V+AYDFGIK NILR L S GC + VVP+T+PA L + PDG+ SNGPG
Sbjct: 180 QVDRKDLKYKVVAYDFGIKLNILRCLVSAGCDVTVVPATFPAESALAMNPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP + + +K+ +GK P+FGIC+GHQL+G ALG
Sbjct: 240 DPEPMKEVIENIKKFVGKKPIFGICLGHQLMGLALG 275
>gi|387128719|ref|YP_006297324.1| carbamoyl-phosphate synthase small subunit [Methylophaga sp. JAM1]
gi|386275781|gb|AFI85679.1| Carbamoyl-phosphate synthase small chain [Methylophaga sp. JAM1]
Length = 376
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 177/276 (64%), Gaps = 6/276 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L LEDG+++ +S GA G VGEVVFNT++TGYQEI+TDPSY Q V +T PHIGN
Sbjct: 4 TALLALEDGTVFHGESIGAVGQSVGEVVFNTAMTGYQEIITDPSYCRQIVTLTYPHIGNV 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DDEES Q + +GL+IR LS S+WR E L YL +N++G+ +DTR +TR LR
Sbjct: 64 GVNKDDEESDQIYASGLIIRELSPVMSSWRGEEALDKYLERQNVVGLAGIDTRRLTRLLR 123
Query: 127 QDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G +++ + D + + G+DL +VS K+ +EW + W +
Sbjct: 124 EKGAQKGCIVAGDNIDVDAAIAAAKAFAGLKGMDLAKEVSTKQAYEWTDGV---WHIDNQ 180
Query: 186 ERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
R ++ + V+AYD+GIK NI+R L GC++ VVP+ PA E +KL PDG+ +NGPGD
Sbjct: 181 SRKAEPRFHVVAYDYGIKKNIMRMLTERGCKLTVVPAQMPAEEVMKLNPDGIFLANGPGD 240
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ ++ L K +P+FGIC+GHQLL A G
Sbjct: 241 PEPCDYAIKAIQYFLDKEMPIFGICLGHQLLALACG 276
>gi|15603367|ref|NP_246441.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. Pm70]
gi|425066385|ref|ZP_18469505.1| Carbamoyl-phosphate synthase small chain [Pasteurella multocida
subsp. gallicida P1059]
gi|21759049|sp|Q9CKV3.1|CARA_PASMU RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|12721888|gb|AAK03586.1| CarA [Pasteurella multocida subsp. multocida str. Pm70]
gi|404381601|gb|EJZ78070.1| Carbamoyl-phosphate synthase small chain [Pasteurella multocida
subsp. gallicida P1059]
Length = 385
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 177/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGTSIGAKGHTVGEVVFNTAMTGYQEILTDPSYFRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D E+ + +GL+IR L + SN+R + +L +YL N++ I D+DTR +TR LR
Sbjct: 65 TNLEDCEANHVYASGLIIRDLPLLHSNFRSSMSLRDYLQTHNVVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T E + + LE+++S+ + G DL +VS E F W T W
Sbjct: 125 KGAQAGCIMTGEI-DEAKALELAKSFGSMAGKDLAQEVSTGEIFTW---TSGQWQLGKGF 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYDFG+KHNILR LA GC+I VVP+ A + L L PDG+ SNGPGD
Sbjct: 181 IEQTQAEFNVVAYDFGVKHNILRMLAERGCKITVVPAKTSAEQVLALNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ ++ LL K P+FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISAIQTLLASKKPIFGICLGHQLLGLAAG 276
>gi|386862247|ref|YP_006275196.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1026b]
gi|418538831|ref|ZP_13104433.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1026a]
gi|385347116|gb|EIF53786.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1026a]
gi|385659375|gb|AFI66798.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1026b]
Length = 380
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 184/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR+
Sbjct: 67 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRE 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 127 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 182
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 183 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 242
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 243 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 278
>gi|238897352|ref|YP_002923029.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465107|gb|ACQ66881.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 385
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S G+ G VGEVVFNT++TGYQEILTDPSY Q V +T PHIG
Sbjct: 1 MTSALLVLEDGTEFYGRSVGSIGLVVGEVVFNTAMTGYQEILTDPSYLRQIVTLTCPHIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES + ++ GLVIR LS+ SN+R ETL +YL +I+ I D+DTR +TR
Sbjct: 61 NVGTNLSDAESDKVYVQGLVIRDLSLVASNYRSEETLSDYLKRHHIVAIADIDTRKLTRL 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTK---P 178
L + G+ G + SK+ +L + D + G+DL+ VS K P++WVE T
Sbjct: 121 LSEKGAQKGCIIA--SKTLDPVLALEEIHDFPGLKGVDLVKTVSVKTPYDWVEGTGGWLS 178
Query: 179 DWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
D NT +R++ + V+ YD+GIK N+LR L C++ VVP+ A + LKPDGVL
Sbjct: 179 DGMPNTKKRDASPFHVVVYDYGIKRNMLRMLVDRSCRVTVVPAHTSAQAVISLKPDGVLL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++LL +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCEYAIAAIQDLLEADIPLFGICLGHQLLALASG 280
>gi|198282926|ref|YP_002219247.1| carbamoyl-phosphate synthase small subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667825|ref|YP_002425129.1| carbamoyl-phosphate synthase small subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247447|gb|ACH83040.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218520038|gb|ACK80624.1| carbamoyl-phosphate synthase, small subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 380
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 181/276 (65%), Gaps = 3/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DGSI+R FGA+G GE+ FNT+++GYQEIL+DPSY GQ + +T PHIGNT
Sbjct: 2 QAVLALADGSIYRGIGFGATGLAAGEICFNTAMSGYQEILSDPSYQGQIITLTYPHIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E + F + LV+R+L S+WR + L ++L I GI +DTRA+TRRLR
Sbjct: 62 GVNPEDMEGTRIFCSALVVRNLPRQPSSWRSTQDLASFLQTHRIPGIAGIDTRALTRRLR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEW-VESTKPDWDFNT 184
G+ + E+ S+++ L +R++ ++G DL+ DV +E + W + S P+ ++
Sbjct: 122 DSGAQNAAVLVGEAASEEKALAAARAFPGLIGRDLVQDVGCREAYTWDLASGTPEQGYHA 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
V+ YDFG K NILR LA C+I VVP+ A+E + L+PDG+LFSNGPGD
Sbjct: 182 QAVTRTQCHVVVYDFGTKRNILRLLADRACRITVVPARTAAAEVIALRPDGILFSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P+A+ YA +++++ +P FG+C+GHQLLG+ALG
Sbjct: 242 PAALGYAEEAMRQVIATGIPTFGLCLGHQLLGRALG 277
>gi|120556266|ref|YP_960617.1| carbamoyl-phosphate synthase small subunit [Marinobacter aquaeolei
VT8]
gi|120326115|gb|ABM20430.1| carbamoyl-phosphate synthase small subunit [Marinobacter aquaeolei
VT8]
Length = 381
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 188/276 (68%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 10 AILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGL+IR L + S+WR ++L +YL NI+GI D+DTR +TR LR
Sbjct: 70 VNDEDVESDRIQAAGLIIRDLPLIASSWRNQQSLDDYLRSNNIVGIADIDTRRLTRILRD 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--T 184
GS G + E+ + + LE+++++ + G+DL +V+ ++ ++W ++ +WD
Sbjct: 130 KGSQNGAIVAGENATAERALELAKAFPGLKGMDLAKEVTSEKTYQWSQT---EWDITGGY 186
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+++ ++V+A+D+G+K NILR LA+ GC I VVP+ PASE L + PDG+ SNGPGD
Sbjct: 187 GEQSAPKFKVVAWDYGVKFNILRMLAARGCGITVVPAQTPASEVLAMNPDGIFLSNGPGD 246
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 247 PEPCDYAIKAIQEVLETEIPVFGICLGHQLLALASG 282
>gi|388468267|ref|ZP_10142477.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas synxantha
BG33R]
gi|388011847|gb|EIK73034.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas synxantha
BG33R]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + ++ SD+ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMVGDNISDEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+AYD+G+K+NILR L GC++ VVP+ PAS+ L ++PDGV SNG
Sbjct: 182 HATIEAADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLAMQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETDIPVFGICLGHQLLALASG 280
>gi|374336277|ref|YP_005092964.1| carbamoyl phosphate synthase small subunit [Oceanimonas sp. GK1]
gi|372985964|gb|AEY02214.1| carbamoyl phosphate synthase small subunit [Oceanimonas sp. GK1]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 176/279 (63%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFRGTAIGADGCAVGEVVFNTSMTGYQEILTDPSYARQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + GL+IR L + S++R TL +YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNAEDEESDRVHAQGLIIRDLPLIASSFRNQRTLSDYLKAHNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + D + L ++ + + G+DL VS +EW E + W
Sbjct: 124 EKGAQAGCILAGADLDDAKALAEAKGFPGLKGMDLAKVVSTASRYEWREGS---WQLGQG 180
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + + Y V+AYDFG K NILR L GC++ VVP+ PA+E L L PDG+ SNG
Sbjct: 181 HSQPTDAELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPAAEVLALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K L +PVFGIC+GHQLLG A G
Sbjct: 241 PGDPEPCDYAIEAIKTFLETDIPVFGICLGHQLLGLASG 279
>gi|254180209|ref|ZP_04886808.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1655]
gi|184210749|gb|EDU07792.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1655]
Length = 381
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 184/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR+
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|429210174|ref|ZP_19201341.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. M1]
gi|428158948|gb|EKX05494.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. M1]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + S+WR ++L +YL E + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLLASSWRNKQSLPDYLKENGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + + ++++ LE++RS+ + G+DL VS E +EW S W+ T
Sbjct: 125 KGSQNGCILAGDDATEEKALELARSFPGLKGMDLAKVVSATERYEWRSSV---WNLETDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYDFG+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAAELPYHVVAYDFGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|398938780|ref|ZP_10668082.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp.
GM41(2012)]
gi|398165252|gb|EJM53372.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp.
GM41(2012)]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES Q + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESSQVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA+E L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAAEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETDIPVFGICLGHQLLALASG 280
>gi|189425142|ref|YP_001952319.1| carbamoyl phosphate synthase small subunit [Geobacter lovleyi SZ]
gi|189421401|gb|ACD95799.1| carbamoyl-phosphate synthase, small subunit [Geobacter lovleyi SZ]
Length = 373
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 174/274 (63%), Gaps = 1/274 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG I+ KSFGA G GEVVFNT++TGYQE+LTDPSY GQ V MT IGNT
Sbjct: 2 KAILALADGRIFEGKSFGAGGEASGEVVFNTAMTGYQEVLTDPSYKGQMVTMTYTQIGNT 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ESR FL+G ++R SN+R +L YL E ++GI+ +DTRA+TR LR
Sbjct: 62 GINPEDIESRGLFLSGFIVREYLDFPSNFRSTMSLDAYLKENGVVGIHGLDTRALTRHLR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G++ST + + + + G+DL S VS +P+ W E K +
Sbjct: 122 DKGAQNGIISTVDFDHASLVAKARAIPSMAGLDLASGVSCDKPYHWTEGAWKLGEGYPQI 181
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + Y+V+AYDFGIK+NILR L GC + VVP+T+PA E L + PDG+ SNGPGDP
Sbjct: 182 DPATLKYKVVAYDFGIKYNILRCLVDAGCDVTVVPATFPAEEALAMNPDGIFLSNGPGDP 241
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+ +++ +GK PVFGIC+GHQLLG ALG
Sbjct: 242 EPLVAVQQEIRKFIGKKPVFGICLGHQLLGLALG 275
>gi|87124229|ref|ZP_01080078.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
RS9917]
gi|86167801|gb|EAQ69059.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
RS9917]
Length = 384
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 185/277 (66%), Gaps = 4/277 (1%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
A ARLVL DG+++ + GA G+ VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GN
Sbjct: 12 ATARLVLADGTVFEGLACGARGSVVGEVVFNTGMTGYQEVLTDPSYAGQLVTFTYPELGN 71
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
TGVN +D+E+ + GL+ R L+ SNWRC + L ++L ++GI+ +DTRA+ R L
Sbjct: 72 TGVNPEDQEAEKPHALGLIARQLAPRPSNWRCHQPLPDWLDAHGVVGIHGIDTRALVRHL 131
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
R+ G++ GV+S+ + +S Q LL+ RS + G++L VS ++P+ W + +D
Sbjct: 132 RETGAMNGVISS-DGQSPQALLDTVRSAPSMQGLNLADQVSTEQPYTWTSACSAAFDQRL 190
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
S+ YRV+A DFGIK IL RL +GC++ V+P+ + L +P+GV SNGPGD
Sbjct: 191 QPSPSQRYRVVAIDFGIKRAILDRLVGHGCEVTVMPADVDLATVLAQQPEGVFLSNGPGD 250
Query: 245 PSAVPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
P+AV +A+ + LL + +P+FGIC+GHQ+LG ALG
Sbjct: 251 PAAVTNGIALARGLLAEKTLPLFGICLGHQILGLALG 287
>gi|417854303|ref|ZP_12499619.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. Anand1_goat]
gi|338218217|gb|EGP04004.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. Anand1_goat]
Length = 385
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 177/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGSSIGAKGHTVGEVVFNTAMTGYQEILTDPSYFRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D E+ + +GL+IR L + SN+R + +L +YL N++ I D+DTR +TR LR
Sbjct: 65 TNLEDCEANHVYASGLIIRDLPLLHSNFRSSMSLRDYLQTHNVVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T E + + LE+++S+ + G DL +VS E F W T W
Sbjct: 125 KGAQAGCIMTGEI-DEAKALELAKSFGSMAGKDLAQEVSTGEIFTW---TSGQWQLGKGF 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYDFG+KHNILR LA GC+I VVP+ A + L L PDG+ SNGPGD
Sbjct: 181 IEQTQAEFNVVAYDFGVKHNILRMLAERGCKITVVPAKTSAEQVLALNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ ++ LL K P+FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISAIQTLLASKKPIFGICLGHQLLGLAAG 276
>gi|220934151|ref|YP_002513050.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254813552|sp|B8GNX4.1|CARA_THISH RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|219995461|gb|ACL72063.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 379
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/278 (48%), Positives = 179/278 (64%), Gaps = 3/278 (1%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N A L LEDGS++ S GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHI
Sbjct: 2 NFTPALLALEDGSLFHGISIGAPGQTVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHI 61
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GNTGVN +DEES AGLVIR L S+WR E+L +YL ++ I ++DTR +TR
Sbjct: 62 GNTGVNPEDEESAGVHAAGLVIRDLPPLVSSWRSRESLPDYLTRFGVVAIANIDTRRLTR 121
Query: 124 RLRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF 182
LR+ G+ G + E +Q L +R + + G+DL +VS E ++W E T
Sbjct: 122 ILREKGAQNGCIMAGEI-DEQAALAAARGFPGLKGMDLAKEVSTAEIYDWTEGTWQLGSG 180
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ S Y+V+AYDFG+K NILR L GCQ+ VVP+ PA++ L ++PDGV SNGP
Sbjct: 181 HAPAPASSPYKVVAYDFGVKRNILRMLVDRGCQVTVVPAQTPAAQVLAMQPDGVFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA++ ++E++ +P +GIC+GHQLLG A G
Sbjct: 241 GDPEPCDYAISAIREIVDTGIPTYGICLGHQLLGLASG 278
>gi|126452643|ref|YP_001065778.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1106a]
gi|167845193|ref|ZP_02470701.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei B7210]
gi|242316568|ref|ZP_04815584.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1106b]
gi|126226285|gb|ABN89825.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1106a]
gi|242139807|gb|EES26209.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1106b]
Length = 381
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 184/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR+
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|78779232|ref|YP_397344.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9312]
gi|78712731|gb|ABB49908.1| carbamoyl-phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9312]
Length = 379
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G I+ SFG SGT VGE+VFNT +TGYQE++TDPSY GQ + T P +GNT
Sbjct: 8 NAKLVLSNGLIFPGFSFGYSGTAVGEIVFNTGMTGYQEVITDPSYYGQILTFTYPEVGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES C + G+++R+ S SNWR + +L E+ I+G+Y +DTRA+ + LR
Sbjct: 68 GINTEDSESSIC-VKGIIVRNYSTNNSNWRSLKNFNEWLVEKKIIGLYGIDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
+GS+ VL++EE D L ++ + + G++L +VS K+ + W T D+D +
Sbjct: 127 SNGSMNAVLTSEERTLDNCLEIINETPKMEGLNLSKEVSTKQQYLWRNPTGTDFDVRKRY 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
N+ +V+A DFGIK +IL RL S+GC+I+V+PS+ + + KPDG+ FSNGPGDP
Sbjct: 187 SENTNKLKVVAIDFGIKKSILNRLVSHGCEILVLPSSSSLKDVISNKPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S+V + + + L+ G++P+FGIC+GHQ+ G ALG
Sbjct: 247 SSVTEGIDLARSLIEYGEIPMFGICLGHQIFGIALG 282
>gi|296122281|ref|YP_003630059.1| carbamoyl-phosphate synthase small subunit [Planctomyces
limnophilus DSM 3776]
gi|296014621|gb|ADG67860.1| carbamoyl-phosphate synthase, small subunit [Planctomyces
limnophilus DSM 3776]
Length = 383
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 172/274 (62%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
++A L L DGS++ +FGASG GEVVFNTS+TGY EILTDPSY GQ V MT P IGN
Sbjct: 7 SSACLALADGSVFFGSAFGASGEVTGEVVFNTSMTGYGEILTDPSYCGQIVTMTYPLIGN 66
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
G+NF+D ES L V+R L SN+R +L +YL + ++G+ +DTR++ RRL
Sbjct: 67 YGINFEDVESNGPRLRAFVVRELCRAPSNFRSELSLDDYLRKAGVIGLEGIDTRSLVRRL 126
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
R GS+ GVLST + + + + IVG DL+ +V F W E
Sbjct: 127 RSQGSVTGVLSTVDLDPQSLIAKAQAAPSIVGQDLVQEVMPAASFAWTERLGNFATLAPQ 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ Y V+A D+G+K NILR L GC++ VVP T A+E L L+PDGV SNGPGDP
Sbjct: 187 DSQPTRYHVVAIDYGMKWNILRHLTQVGCRVTVVPGTSTAAEILALQPDGVFLSNGPGDP 246
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+ YA+ ++ELLGK+P+FGIC+GHQLLG A G
Sbjct: 247 EPLTYAIRTIRELLGKLPIFGICLGHQLLGLAAG 280
>gi|289676012|ref|ZP_06496902.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. syringae FF5]
gi|422668714|ref|ZP_16728568.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|330981077|gb|EGH79180.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aptata str. DSM 50252]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +RS+ + G+DL +V K+ +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARSFPGLKGMDLAKEVCTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|422644509|ref|ZP_16707647.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. maculicola str. ES4326]
gi|330958061|gb|EGH58321.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRHSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PA+E L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPANEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEVPVFGICLGHQLLALAAG 280
>gi|237798551|ref|ZP_04587012.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. oryzae str. 1_6]
gi|331021404|gb|EGI01461.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. oryzae str. 1_6]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRHSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+GIK NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGIKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLQTELPVFGICLGHQLLALAAG 280
>gi|86604920|ref|YP_473683.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
JA-3-3Ab]
gi|86553462|gb|ABC98420.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
JA-3-3Ab]
Length = 395
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 182/284 (64%), Gaps = 7/284 (2%)
Query: 2 PWNVAN-ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
PW+ A LVL DG+ + SFGA GT VGEVVFNT +TGYQE++TDPSY GQ + T
Sbjct: 14 PWHARQPALLVLADGTAFPGWSFGAPGTAVGEVVFNTGMTGYQEVITDPSYRGQLITFTC 73
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
P +GNTG+N D+ES + AG++ R++S S+WR TL YL I GI VDTRA
Sbjct: 74 PELGNTGINELDQESARPQAAGIIARNVSRLASSWRATGTLPEYLKGHGIPGIAGVDTRA 133
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
+TRRLR G + G +STE L + ++ + G+ L+++V+ +P+EW+E T DW
Sbjct: 134 LTRRLRSQGVMNGAISTEILDPQALLERVRQAPSMQGLSLVAEVTTPKPYEWLEPTPADW 193
Query: 181 DFNTHER---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
D+ + RV+A DFGIK NILRRLA YGC+++V+P+ E L PDG+L
Sbjct: 194 DYGRSQGIPIPDPPLRVVALDFGIKRNILRRLARYGCRVMVLPAHASPEEILSYNPDGIL 253
Query: 238 FSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP+A A+ + LL GK P+FGIC+GHQ+L ALG
Sbjct: 254 LSNGPGDPAAETTAIRTTQALLQSGK-PMFGICLGHQILSLALG 296
>gi|335044225|ref|ZP_08537250.1| carbamoylphosphate synthase small subunit [Methylophaga
aminisulfidivorans MP]
gi|333787471|gb|EGL53355.1| carbamoylphosphate synthase small subunit [Methylophaga
aminisulfidivorans MP]
Length = 376
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 180/276 (65%), Gaps = 6/276 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDG+++ +S GA G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGNT
Sbjct: 4 SALLALEDGTVYHGESIGAIGQSVGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES + +GL+IR LS S+WR + L YL + NI+G+ +DTR++TR +R
Sbjct: 64 GVNDEDEESDNVYASGLIIRELSPVVSSWRSEQALDAYLVKHNIVGLAGIDTRSLTRLIR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G++ G + ++ + + ++ + + G+DL +VS K + W E+ W +
Sbjct: 124 EKGAMKGCIVAGDNIDVEAAIAAAKGFQGLKGLDLAKEVSTKASYVWDEAC---WHIDGQ 180
Query: 186 ERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ ++ Y V+AYD+G K NILR L GC++ VVP+ P E L L PDGV SNGPGD
Sbjct: 181 SQAAEAKYHVVAYDYGAKKNILRMLVERGCKLTVVPAQTPVEEVLALNPDGVFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA++ ++ LL K +P FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISAIQTLLEKDIPTFGICLGHQLLGLACG 276
>gi|254178526|ref|ZP_04885181.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
ATCC 10399]
gi|160699565|gb|EDP89535.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
ATCC 10399]
Length = 381
Score = 260 bits (665), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 184/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + ++L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKVLALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|424069358|ref|ZP_17806804.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
gi|424073743|ref|ZP_17811158.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|440742414|ref|ZP_20921739.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
BRIP39023]
gi|407994925|gb|EKG35478.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
gi|407995555|gb|EKG36078.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|440377251|gb|ELQ13900.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
BRIP39023]
Length = 378
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +RS+ + G+DL +V K+ +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARSFPGLKGMDLAKEVCTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQMPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|253700927|ref|YP_003022116.1| carbamoyl phosphate synthase small subunit [Geobacter sp. M21]
gi|251775777|gb|ACT18358.1| carbamoyl-phosphate synthase, small subunit [Geobacter sp. M21]
Length = 374
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 175/276 (63%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG I++ K+FGA+G GEVVFNT+++GYQE+LTDPSY GQ V MT IGNTG
Sbjct: 3 AVLALADGRIFKGKAFGATGETSGEVVFNTAMSGYQEVLTDPSYKGQMVTMTYTQIGNTG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES + +L+G ++R SN+R +L YL E I+GI +DTRA+TR LR
Sbjct: 63 INPEDVESGRLYLSGFIVREYLDCYSNYRATMSLDAYLKENGIVGIQGIDTRALTRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
G+ G++ST + + + + G+DL + V+ P+ W E WD T
Sbjct: 123 KGAQNGIISTIDFDPESLARKARAIPSMSGLDLATGVTCSAPYHWTEGL---WDLQTGYP 179
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+R Y+V+AYDFGIK NILR L S GC + VVP+T+PA L + PDG+ SNGPG
Sbjct: 180 QVDRKDLKYKVVAYDFGIKLNILRCLVSAGCDVTVVPATFPAESALAMNPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP + + +K+ +GK P+FGIC+GHQL+G ALG
Sbjct: 240 DPEPMKEVIENIKKFVGKKPIFGICLGHQLMGLALG 275
>gi|422637922|ref|ZP_16701354.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
Cit 7]
gi|330950318|gb|EGH50578.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
Cit 7]
Length = 378
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +RS+ + G+DL +V K+ +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARSFPGLKGMDLAKEVCTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQMPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|422629058|ref|ZP_16694264.1| carbamoyl phosphate synthase small subunit, partial [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330937934|gb|EGH41721.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 375
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +RS+ + G+DL +V K+ +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARSFPGLKGMDLAKEVCTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAVSELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|76810379|ref|YP_333012.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1710b]
gi|254197960|ref|ZP_04904382.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei S13]
gi|254260828|ref|ZP_04951882.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1710a]
gi|76579832|gb|ABA49307.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1710b]
gi|169654701|gb|EDS87394.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei S13]
gi|254219517|gb|EET08901.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 1710a]
Length = 381
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 184/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR+
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRRLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|161378171|ref|NP_298396.2| carbamoyl phosphate synthase small subunit [Xylella fastidiosa
9a5c]
gi|21759060|sp|Q9PEC2.2|CARA_XYLFA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
Length = 374
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ + GA+G VGEVVFNTSLTGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGDAVGANGLSVGEVVFNTSLTGYQEVLTDPSYAYQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ + + AGL++R + SNWR +L ++LA R ++ I +DTR +TR LR+
Sbjct: 65 CTDQDDEANKVWAAGLIVRDVPRRPSNWRSQISLSDWLAARGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E D+ + I G+DL VS K+ + W E + D D N +R
Sbjct: 125 KGAQHGALMAGEIDVDRAQDAARQFTGIKGMDLAKVVSTKQAYSWYEG-QLDLDRNEWKR 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ Y+V+AYD+G+K NILR LA GC + VVP+ P E L L PDGV SNGPGDP
Sbjct: 184 AAPQYKVVAYDYGVKLNILRMLAERGCDLTVVPAQTPVDEVLALCPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
YAVA +K ++ +VP+FGIC+GHQLL Q +G
Sbjct: 244 CDYAVAAIKTFIMRRVPIFGICLGHQLLAQTVG 276
>gi|71732584|gb|EAO34637.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
subsp. sandyi Ann-1]
Length = 399
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 178/273 (65%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ + GA+G VGEVVFNT+LTGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 30 AILVLEDGTVFEGDAVGANGLSVGEVVFNTALTGYQEILTDPSYAYQLVTLTYPHIGNTG 89
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ + + AGL++R + SNWR +L ++LA R ++ I +DTR +TR LR+
Sbjct: 90 CTDQDDEANKVWAAGLIVRDVPRRPSNWRSQISLSDWLAARGVVAIAGIDTRKLTRILRE 149
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E + + I G+DL VS K+ + W E + D D N +R
Sbjct: 150 KGAQHGALMAGEIDVGKAQDAACQFAGIKGMDLAKVVSTKQGYSWYEG-QLDLDRNECKR 208
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ Y+V+AYD+G+K NILR LA GC + VVP+ PA E L L PDGV SNGPGDP
Sbjct: 209 AAPQYKVVAYDYGVKLNILRMLAERGCDLTVVPAQTPADEVLALCPDGVFLSNGPGDPEP 268
Query: 248 VPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
YAVA +K ++ ++P+FGIC+GHQLL QA+G
Sbjct: 269 CDYAVAAIKTFIMRRIPIFGICLGHQLLAQAVG 301
>gi|421493483|ref|ZP_15940839.1| CARA [Morganella morganii subsp. morganii KT]
gi|455738009|ref|YP_007504275.1| Carbamoyl-phosphate synthase small chain [Morganella morganii
subsp. morganii KT]
gi|400192233|gb|EJO25373.1| CARA [Morganella morganii subsp. morganii KT]
gi|455419572|gb|AGG29902.1| Carbamoyl-phosphate synthase small chain [Morganella morganii
subsp. morganii KT]
Length = 379
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 179/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL+DG+ + ++ GA G GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SAILVLQDGTTFHGRAIGAEGAVTGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N DEES + GLVIR L + TSN+R E+L YL RN++ I D+DTR +TR LR
Sbjct: 64 GTNSADEESPDVYAQGLVIRDLPLTTSNFRSEESLSEYLKHRNVVAIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + E L+ ++S+ + G+DL +V+ +P+ W + + W ++
Sbjct: 124 EKGAQNGCIIAGEHPDAALALKNAQSFSGLNGLDLAKEVTTAQPYSWTQGS---WTLDSG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
KT + V+AYDFG K NILR L GC++ VVP+ PA E LK+ PDG+ SN
Sbjct: 181 LPADKTAEELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPAEEVLKMAPDGIFLSN 240
Query: 241 GPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+ YA+ AI + L +P+FGIC+GHQLL A G
Sbjct: 241 GPGDPAPCDYAIEAITRFLETDIPLFGICLGHQLLALASG 280
>gi|377577111|ref|ZP_09806094.1| carbamoyl-phosphate synthase small chain [Escherichia hermannii
NBRC 105704]
gi|377541639|dbj|GAB51259.1| carbamoyl-phosphate synthase small chain [Escherichia hermannii
NBRC 105704]
Length = 382
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 181/282 (64%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GASGT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFYGRAIGASGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I DVDTR +TR
Sbjct: 62 NVGTNPADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADVDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
L + G+ G + ++ LE ++S+ + G+DL +V+ +EP+ W + + W+
Sbjct: 122 LSEKGAQNGCIIVGDTLDAALALEKAKSFPGLNGMDLAKEVTTREPYRWTQGS---WELK 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+KT + V+AYD+G K NILR L GC++ VVP+ PA++ LK+ PDG+
Sbjct: 179 NGLPEAKTDEELPFHVVAYDYGGKRNILRMLVDRGCRLTVVPAQTPAADVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIKTFLDTDIPVFGICLGHQLLALASG 280
>gi|403518208|ref|YP_006652341.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei BPC006]
gi|403073851|gb|AFR15431.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei BPC006]
Length = 373
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 183/274 (66%), Gaps = 8/274 (2%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN GVN
Sbjct: 2 LALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVGVN 61
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR+ G
Sbjct: 62 AEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILREKG 121
Query: 130 SLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERN 188
+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 122 AQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGYGM 177
Query: 189 SKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGDP
Sbjct: 178 QETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGDPQ 237
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 238 PCDYAIAATREFIERGVPTFGICLGHQIMGLALG 271
>gi|418021874|ref|ZP_12660864.1| carbamoyl-phosphate synthase [Candidatus Regiella insecticola
R5.15]
gi|347602763|gb|EGY27737.1| carbamoyl-phosphate synthase [Candidatus Regiella insecticola
R5.15]
Length = 402
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 12/284 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 13 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 72
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTG N DEES + GL+IR L + SN+R E+L YL +++ I D+DTR +TR
Sbjct: 73 NTGTNSIDEESGAVQVQGLIIRDLPLMASNYRSEESLSQYLKRHHVVAIADIDTRQLTRL 132
Query: 125 LRQDGSLIGVLSTEESKSD--QELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
LR G+ G + T + LE ++ + +VG+DL +VS K + W++ W
Sbjct: 133 LRDKGAQNGCIITGQPSPALLASALEKAQQFPGLVGMDLAKEVSTKAAYPWLQG---KWT 189
Query: 182 FNTHERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ N+ ++V+ YD+G+K NILR L GCQ+ VVP+ PA E LKL PDGV
Sbjct: 190 LDNERPNACNTADLPFQVVVYDYGVKRNILRLLVEQGCQLTVVPAQTPAEEVLKLNPDGV 249
Query: 237 LFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ +K LL K+P+FGIC+GHQLL A G
Sbjct: 250 FLSNGPGDPAPCDYAIRAIKRLLETKIPLFGICLGHQLLALASG 293
>gi|390957852|ref|YP_006421609.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
gi|390958193|ref|YP_006421950.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
gi|390412770|gb|AFL88274.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
gi|390413111|gb|AFL88615.1| carbamoyl-phosphate synthase small subunit [Terriglobus roseus DSM
18391]
Length = 379
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 174/277 (62%), Gaps = 5/277 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I+R K FGA GEVVFNT+LTGYQEI TDPSYAGQ V++TNP IGN G
Sbjct: 3 AILALEDGRIFRGKGFGAPAECSGEVVFNTALTGYQEIFTDPSYAGQIVVLTNPQIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + ++ GLV R S +SNWR + YL + N+ I +VDTRAI R LR
Sbjct: 63 TTPNDAESTKPYIEGLVTREFSPVSSNWRSTQVTDEYLEKYNVPVIAEVDTRAIVRHLRA 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH-- 185
+G + GV+ST+ + D + + + G DL S VS K P+E+ ++ + +
Sbjct: 123 NGVMRGVISTKVTDVDVLVAKARAIRKMDGTDLASVVSTKTPYEFSSASAANETGDKFLP 182
Query: 186 ---ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ K V+AYDFGIK NILR LA C++ VVP+ A+E L + PDGV FSNGP
Sbjct: 183 ASISTDGKQMHVVAYDFGIKQNILRMLARENCRVTVVPAKTSAAEVLAMNPDGVFFSNGP 242
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + YA V++L GK P+FGIC+GHQ+ G ALG
Sbjct: 243 GDPEPLDYAQKNVQDLAGKTPMFGICLGHQIFGLALG 279
>gi|83721358|ref|YP_443295.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis E264]
gi|167582312|ref|ZP_02375186.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis TXDOH]
gi|167620409|ref|ZP_02389040.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis Bt4]
gi|257139531|ref|ZP_05587793.1| carbamoyl phosphate synthase small subunit [Burkholderia
thailandensis E264]
gi|83655183|gb|ABC39246.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
thailandensis E264]
Length = 381
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 182/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMERTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTTKPFEWRQT---EWRLGSGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + YRV+A+DFG+K+NILR LA GC + V+P+ A+E L L PDG+ SNGPGD
Sbjct: 184 GMQEAPRYRVVAFDFGVKYNILRMLAERGCHVTVLPAQSSAAEALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G ALG
Sbjct: 244 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLALG 279
>gi|352104765|ref|ZP_08960518.1| carbamoyl-phosphate synthase small subunit [Halomonas sp. HAL1]
gi|350598687|gb|EHA14797.1| carbamoyl-phosphate synthase small subunit [Halomonas sp. HAL1]
Length = 381
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 186/282 (65%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILALEDGSVFHGIAIGADGVTSGEVVFNTAMTGYQEILTDPSYTRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
+N +D ES AGLVIR L + S++R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 65 INAEDIESASIAAAGLVIRDLPLMASSFRSEQSLSDYLKSQNVLGIADIDTRRLTRILRD 124
Query: 127 ---QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD- 181
Q+G+++ E ++ LE ++++ + G+DL +VS KE +EW E +W
Sbjct: 125 KGAQNGAILAGADAEGEEAVARALEAAKAFPGLKGMDLAKEVSCKEAYEWSEG---EWTL 181
Query: 182 ---FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ ++ + Y V+AYD+G+K NILR LA+ GC++ VVP+ PA++ L +KPDGV
Sbjct: 182 GEGYADASQSERPYHVVAYDYGVKFNILRMLAARGCRLTVVPAQTPAADVLAMKPDGVFL 241
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+NGPGDP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 242 ANGPGDPEPCDYAIKAIQDVLETDIPVFGICLGHQLLALAAG 283
>gi|300724593|ref|YP_003713918.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Xenorhabdus nematophila ATCC 19061]
gi|297631135|emb|CBJ91826.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Xenorhabdus nematophila ATCC 19061]
Length = 380
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 173/274 (63%), Gaps = 4/274 (1%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G+N
Sbjct: 1 MVLEDGTQFHGRAIGAEGVAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGIN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES GLVIR L + TSN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 AADEESPSVQAQGLVIRDLPLVTSNFRSEENLSDYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWDFNTHE 186
+ G + Q LE ++S+ + G+DL +V+ + + WV+ T D T +
Sbjct: 121 AQNGCIIASNEADAQVALEKAKSFPGLKGMDLAKEVTTAQSYPWVQGSWTLADELPETSK 180
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
Y ++AYDFG+K NILR L GC++ VVP+ A E LK+ PDG+ SNGPGDP
Sbjct: 181 EQELPYHIVAYDFGVKRNILRMLVDRGCRVTVVPAKTSADEVLKMAPDGIFLSNGPGDPE 240
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K L ++PVFGIC+GHQLL A G
Sbjct: 241 PCDYAIEAIKTFLNTEIPVFGICLGHQLLALASG 274
>gi|9106061|gb|AAF83916.1|AE003946_7 carbamoyl-phosphate synthase small chain [Xylella fastidiosa 9a5c]
Length = 399
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/273 (48%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ + GA+G VGEVVFNTSLTGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 30 AILVLEDGTVFEGDAVGANGLSVGEVVFNTSLTGYQEVLTDPSYAYQLVTLTYPHIGNTG 89
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ + + AGL++R + SNWR +L ++LA R ++ I +DTR +TR LR+
Sbjct: 90 CTDQDDEANKVWAAGLIVRDVPRRPSNWRSQISLSDWLAARGVVAIAGIDTRKLTRILRE 149
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E D+ + I G+DL VS K+ + W E + D D N +R
Sbjct: 150 KGAQHGALMAGEIDVDRAQDAARQFTGIKGMDLAKVVSTKQAYSWYEG-QLDLDRNEWKR 208
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ Y+V+AYD+G+K NILR LA GC + VVP+ P E L L PDGV SNGPGDP
Sbjct: 209 AAPQYKVVAYDYGVKLNILRMLAERGCDLTVVPAQTPVDEVLALCPDGVFLSNGPGDPEP 268
Query: 248 VPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
YAVA +K ++ +VP+FGIC+GHQLL Q +G
Sbjct: 269 CDYAVAAIKTFIMRRVPIFGICLGHQLLAQTVG 301
>gi|71276057|ref|ZP_00652338.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
Dixon]
gi|170729659|ref|YP_001775092.1| carbamoyl phosphate synthase small subunit [Xylella fastidiosa M12]
gi|71163140|gb|EAO12861.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
Dixon]
gi|71730792|gb|EAO32865.1| Carbamoyl-phosphate synthase, small subunit [Xylella fastidiosa
subsp. sandyi Ann-1]
gi|167964452|gb|ACA11462.1| carbamoyl-phosphate synthase small chain [Xylella fastidiosa M12]
Length = 399
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/273 (49%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ + GA+G VGEVVFNT+LTGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 30 AILVLEDGTVFEGDAVGANGLSVGEVVFNTALTGYQEILTDPSYAYQLVTLTYPHIGNTG 89
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ + + AGL++R + SNWR +L ++LA R ++ I +DTR +TR LR+
Sbjct: 90 CTDQDDEANKVWAAGLIVRDVPRRPSNWRSQISLSDWLAARGVVAIAGIDTRKLTRILRE 149
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E + + I G+DL VS K+ + W E + D D N +R
Sbjct: 150 KGAQHGALMAGEIDVGKAQDAARQFAGIKGMDLAKVVSTKQGYSWYEG-QLDLDRNEFKR 208
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ Y V+AYD+G+K NILR LA GC + VVP+ PA E L L PDGV SNGPGDP
Sbjct: 209 AAPQYEVVAYDYGVKLNILRMLAERGCDLTVVPAQTPADEVLALCPDGVFLSNGPGDPEP 268
Query: 248 VPYAVAIVKE-LLGKVPVFGICMGHQLLGQALG 279
YAVA +K ++ +VP+FGIC+GHQLL QA+G
Sbjct: 269 CDYAVAAIKTFIMRRVPIFGICLGHQLLAQAVG 301
>gi|209694177|ref|YP_002262105.1| carbamoyl phosphate synthase small subunit [Aliivibrio salmonicida
LFI1238]
gi|208008128|emb|CAQ78270.1| carbamoyl-phosphate synthase small chain [Aliivibrio salmonicida
LFI1238]
Length = 384
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 182/285 (63%), Gaps = 15/285 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGQSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +DEES GLVIR L + SN+R +TL YL +NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDEESSSIHAQGLVIRDLPLLASNFRSEQTLSEYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G +I S +ES D+ L ++++ + G+DL +V+ E ++W + + W
Sbjct: 124 EKGAQNGCIIACSSKKESNLDEAFALAQAKAFPGLKGMDLAKEVTTSEAYQWKQGS---W 180
Query: 181 DFNTHERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
K + V+AYDFG K NILR L GC++ VVP+ A E L + PDG
Sbjct: 181 TLTGGLPEEKADSELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLAMNPDG 240
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V SNGPGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 VFLSNGPGDPAPCTYAIEATKVFLDKGLPIFGICLGHQILALASG 285
>gi|262274896|ref|ZP_06052707.1| carbamoyl-phosphate synthase small chain [Grimontia hollisae CIP
101886]
gi|262221459|gb|EEY72773.1| carbamoyl-phosphate synthase small chain [Grimontia hollisae CIP
101886]
Length = 379
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 179/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGESIGADGTAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES Q GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESSQIHAQGLVIRDLPLIASNFRNQQSLSDYLKAQNIVGIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + ++ + L ++ + + G+DL +V+ E +EW + + W
Sbjct: 124 EKGAQNGCIVAGDNIDEALALAKAKEFPGLKGMDLAKEVTTAEAYEWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ PA + L + PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPAEDVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLDKGLPIFGICLGHQILALASG 280
>gi|387890598|ref|YP_006320896.1| carbamoyl-phosphate synthase small subunit [Escherichia blattae DSM
4481]
gi|386925431|gb|AFJ48385.1| carbamoyl-phosphate synthase small chain [Escherichia blattae DSM
4481]
Length = 382
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GASG VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGASGFAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GL+IR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNPADEESSQVHAQGLIIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ Q LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQGGCIIAGDNPDAQLALEKARAFPGLNGMDLAKEVTTAEPYSWQQGS---WTLQ 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+KT + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKTAEELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ +K+ + +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIKKFMTTDIPVFGICLGHQLLALASG 280
>gi|302185420|ref|ZP_07262093.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. syringae 642]
Length = 378
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +RS+ + G+DL +V K+ +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARSFPGLKGMDLAKEVCTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|126440032|ref|YP_001058518.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 668]
gi|167823648|ref|ZP_02455119.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 9]
gi|226196221|ref|ZP_03791806.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei Pakistan 9]
gi|126219525|gb|ABN83031.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 668]
gi|225931807|gb|EEH27809.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei Pakistan 9]
Length = 381
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|53718988|ref|YP_107974.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei K96243]
gi|53725565|ref|YP_102533.1| carbamoyl phosphate synthase small subunit [Burkholderia mallei
ATCC 23344]
gi|121601370|ref|YP_992616.1| carbamoyl phosphate synthase small subunit [Burkholderia mallei
SAVP1]
gi|124384808|ref|YP_001026582.1| carbamoyl phosphate synthase small subunit [Burkholderia mallei
NCTC 10229]
gi|126450555|ref|YP_001080133.1| carbamoyl phosphate synthase small subunit [Burkholderia mallei
NCTC 10247]
gi|167002796|ref|ZP_02268586.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
PRL-20]
gi|167719057|ref|ZP_02402293.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei DM98]
gi|167815240|ref|ZP_02446920.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 91]
gi|167893744|ref|ZP_02481146.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 7894]
gi|167902194|ref|ZP_02489399.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910436|ref|ZP_02497527.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 112]
gi|237811771|ref|YP_002896222.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei MSHR346]
gi|238563617|ref|ZP_00438567.2| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
GB8 horse 4]
gi|254188372|ref|ZP_04894883.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|254199444|ref|ZP_04905810.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
FMH]
gi|254205757|ref|ZP_04912109.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
JHU]
gi|254298043|ref|ZP_04965496.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 406e]
gi|254358842|ref|ZP_04975115.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
2002721280]
gi|52209402|emb|CAH35347.1| carbamoyl-phosphate synthase small chain [Burkholderia pseudomallei
K96243]
gi|52428988|gb|AAU49581.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
ATCC 23344]
gi|121230180|gb|ABM52698.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
SAVP1]
gi|124292828|gb|ABN02097.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
NCTC 10229]
gi|126243425|gb|ABO06518.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
NCTC 10247]
gi|147749040|gb|EDK56114.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
FMH]
gi|147753200|gb|EDK60265.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
JHU]
gi|148027969|gb|EDK85990.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
2002721280]
gi|157807966|gb|EDO85136.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 406e]
gi|157936051|gb|EDO91721.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|237506547|gb|ACQ98865.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei MSHR346]
gi|238520329|gb|EEP83790.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
GB8 horse 4]
gi|243061557|gb|EES43743.1| carbamoyl-phosphate synthase, small subunit [Burkholderia mallei
PRL-20]
Length = 381
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|383311357|ref|YP_005364167.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. HN06]
gi|380872629|gb|AFF24996.1| carbamoyl phosphate synthase small subunit [Pasteurella multocida
subsp. multocida str. HN06]
Length = 385
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 177/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGSSIGAKGHTVGEVVFNTAMTGYQEILTDPSYFRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D E+ + +GL+IR L + SN+R + +L +YL N++ I D+DTR +TR LR
Sbjct: 65 TNLEDCEANHVYASGLIIRDLPLLHSNFRSSMSLRDYLQTHNVVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T E + + LE+++S+ + G DL +VS E F W T W
Sbjct: 125 KGAQAGCIMTGE-IDEAKALELAKSFGSMAGKDLAQEVSTGEIFTW---TSGQWQLGKGF 180
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + V+AYDFG+KHNILR L+ GC+I VVP+ A + L L PDG+ SNGPGD
Sbjct: 181 IEQTQAEFNVVAYDFGVKHNILRMLSERGCKITVVPAKTSAEQVLALNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA++ ++ LL K P+FGIC+GHQLLG A G
Sbjct: 241 PEPCDYAISTIQTLLASKKPIFGICLGHQLLGLAAG 276
>gi|422605015|ref|ZP_16677030.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. mori str. 301020]
gi|330888672|gb|EGH21333.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. mori str. 301020]
Length = 378
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTAEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRSSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASDVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLQTEVPVFGICLGHQLLALAAG 280
>gi|217423573|ref|ZP_03455074.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 576]
gi|217393431|gb|EEC33452.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 576]
Length = 381
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|330447391|ref|ZP_08311040.1| carbamoyl-phosphate synthase small subunit [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491582|dbj|GAA05537.1| carbamoyl-phosphate synthase small subunit [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 379
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNVVGIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 EKGAQNGCIIAGNNIDEAFALEQAKAFPGLKGMDLAKEVTTSETYSWKQGS---WTLENG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
E N Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAQEDNELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKTFLDKNIPIFGICLGHQILALASG 280
>gi|422590244|ref|ZP_16664901.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
gi|330877245|gb|EGH11394.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
Length = 378
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRHSV---WNLQTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++++L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIRQVLETEVPVFGICLGHQLLALAAG 280
>gi|167918461|ref|ZP_02505552.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei BCC215]
gi|418387749|ref|ZP_12967585.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 354a]
gi|418541377|ref|ZP_13106861.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1258a]
gi|418547621|ref|ZP_13112765.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1258b]
gi|418553780|ref|ZP_13118588.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 354e]
gi|385358219|gb|EIF64239.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1258a]
gi|385360434|gb|EIF66366.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 1258b]
gi|385371180|gb|EIF76383.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 354e]
gi|385376054|gb|EIF80772.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 354a]
Length = 380
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRD 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 127 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 182
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 183 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 242
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 243 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 278
>gi|6552725|gb|AAF16525.1|AF191301_1 carbamoyl-phosphate synthase subunit A [Medicago sativa]
Length = 403
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 180/275 (65%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DGS++R + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 30 KAILVLADGSVFRGTAIGAEGLSVGEVVFNTAITGYQEILTDPSYAQQIVTLTYPHIGNT 89
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE + + GLVIR L + SN+R E+L +YL RN++GI D+DTR +TR LR
Sbjct: 90 GTNTEDEECERIWATGLVIRDLPLLASNFRNQESLSDYLKARNVIGIADIDTRRLTRLLR 149
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ G L + + + L ++++ + G+DL +V+ E + W ES+ + +T
Sbjct: 150 DKGAQNGCLMAGDDVDEAKALAAAKAFGGLKGLDLAKEVTVSESYSWNESSWKLGEGHTA 209
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+K ++V+AYDFG+K NILR LA GC + VVP+ A+E L L PDG+ SNGPGDP
Sbjct: 210 LTGAKKFKVVAYDFGVKRNILRMLADRGCDLTVVPAKTTAAEVLALNPDGIFLSNGPGDP 269
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 270 EPCTYAIDAIKAFLETDIPVFGICLGHQLLALASG 304
>gi|167738056|ref|ZP_02410830.1| carbamoyl phosphate synthase small subunit [Burkholderia
pseudomallei 14]
Length = 381
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALTDGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|410627728|ref|ZP_11338465.1| carbamoyl-phosphate synthase small subunit [Glaciecola mesophila
KMM 241]
gi|410152802|dbj|GAC25234.1| carbamoyl-phosphate synthase small subunit [Glaciecola mesophila
KMM 241]
Length = 381
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/284 (48%), Positives = 186/284 (65%), Gaps = 15/284 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGATGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + + GL+IR L + SN+R ++L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDCESTKVWAKGLIIRDLPLLASNFRNEQSLSEYLRVNNILGIADIDTRRLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G +I V S+ + D+EL LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 DKGAQNGCIIAVDSSSDISLDKELALEKAKAFSGLKGLDLAKEVTTDEVYSWTDGS---W 180
Query: 181 D----FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
FN ++ + V+AYDFG KHNILR L GC++ VVP+ A + L L PDGV
Sbjct: 181 TLGQGFN-EKQTDLAFHVVAYDFGAKHNILRMLVDRGCRLTVVPAKTTAEDVLALNPDGV 239
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 240 FLSNGPGDPEPCVYAIEAIKTLLDKNLPIFGICLGHQLLALASG 283
>gi|298157069|gb|EFH98158.1| Carbamoyl-phosphate synthase small chain [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 378
Score = 259 bits (662), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSNKDTYEWRSSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASDVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLQTEVPVFGICLGHQLLALAAG 280
>gi|345870095|ref|ZP_08822050.1| carbamoyl-phosphate synthase, small subunit [Thiorhodococcus
drewsii AZ1]
gi|343922482|gb|EGV33184.1| carbamoyl-phosphate synthase, small subunit [Thiorhodococcus
drewsii AZ1]
Length = 440
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/281 (49%), Positives = 177/281 (62%), Gaps = 12/281 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++ S GA GT+VGEVVFNT+++GYQEILTDPSY Q V +T PHIGN G
Sbjct: 61 AVLVLEDGSVFHGTSIGADGTRVGEVVFNTAMSGYQEILTDPSYLRQLVTLTYPHIGNVG 120
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES AGL+IR L I SN+R ETL YL +N++GI D+DTR +TR LR+
Sbjct: 121 VNPEDEESGAVQAAGLIIRDLPILPSNFRMQETLDVYLERQNVVGIADIDTRRLTRILRE 180
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G +L+ E D L E + G+DL S +E + W + W +T
Sbjct: 181 KGAQNGCILAGETIDVDAALAEARGFPGLKGMDLAQHASTQEAYCWTQGV---WQLSTGL 237
Query: 187 R-------NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ Y V+AYD+GIK NILR L GC + VVP+ PA+ L L+PDGV S
Sbjct: 238 PEPVKPIGDQLPYHVVAYDYGIKRNILRMLVERGCHVTVVPAHMPAATVLALEPDGVFLS 297
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+ ++ELL +P+FGIC+GHQLLG A G
Sbjct: 298 NGPGDPEPCDYAIDAIRELLETDIPMFGICLGHQLLGLACG 338
>gi|358448889|ref|ZP_09159382.1| carbamoyl-phosphate synthase, small subunit [Marinobacter
manganoxydans MnI7-9]
gi|357226892|gb|EHJ05364.1| carbamoyl-phosphate synthase, small subunit [Marinobacter
manganoxydans MnI7-9]
Length = 376
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 182/276 (65%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGL+IR L + S+WR TL +YL NI+GI D+DTR +TR LR
Sbjct: 65 VNEEDIESDRIQAAGLIIRDLPLLASSWRSKGTLDDYLRSNNIVGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
GS G + E+ + + LE+++++ + G+DL +V+ + + W E+ +W
Sbjct: 125 KGSQNGAIVAGENATAERALELAKAFPGLKGMDLAKEVTSDKIWSWKET---EWTLGEGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
ER ++V+A+D+G+K NILR LAS GC I VVP+ PASE L + PDGV SNGPGD
Sbjct: 182 GEREESRFKVVAWDYGVKLNILRMLASRGCDITVVPAQTPASEVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAITAIKEVLETEIPVFGICLGHQLLALASG 277
>gi|422658016|ref|ZP_16720453.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
gi|331016636|gb|EGH96692.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
Length = 378
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRHSV---WNLQTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPFHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKQVLETEVPVFGICLGHQLLALAAG 280
>gi|114777930|ref|ZP_01452844.1| Carbamoyl-phosphate synthase, small subunit [Mariprofundus
ferrooxydans PV-1]
gi|114551717|gb|EAU54269.1| Carbamoyl-phosphate synthase, small subunit [Mariprofundus
ferrooxydans PV-1]
Length = 374
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 182/277 (65%), Gaps = 4/277 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A L L DG I+R +FGA G VGEV FNTSLTGYQEILTDPSY Q + T PHIG
Sbjct: 1 MTEAILALADGRIFRGHAFGAVGHTVGEVCFNTSLTGYQEILTDPSYTDQIMTFTYPHIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G+N DD ES + G ++R+ + TSN+R L +L ++ I+G+ +DTRA+ R
Sbjct: 61 NVGINADDMESADVAVRGCIVRAPARITSNYRSEGDLAEWLQQQGIVGLSGIDTRALVRH 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ GV+++ + SD + L M+R+W+ + G DL+ VS K+ EW + + D +
Sbjct: 121 LRDHGAQNGVIAS-DGMSDADALAMARAWEGLEGRDLVGQVSCKQVSEWQQGSFHLDDVS 179
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
HE ++ V+A+DFG K NI +LA G Q+ +VP+ A+E L + PDG+ SNGPG
Sbjct: 180 YHEPRMNSH-VVAFDFGCKRNIFHKLADRGMQVSIVPAGTTAAEVLAMNPDGIFLSNGPG 238
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DPSAV YAV ++EL+ G +PVFGICMGHQLL QALG
Sbjct: 239 DPSAVGYAVDTIRELIAGDIPVFGICMGHQLLSQALG 275
>gi|397655899|ref|YP_006496601.1| carbamoyl-phosphate synthase small subunit [Klebsiella oxytoca
E718]
gi|394344544|gb|AFN30665.1| Carbamoyl-phosphate synthase small chain [Klebsiella oxytoca E718]
Length = 382
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIAAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|77360171|ref|YP_339746.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas haloplanktis TAC125]
gi|76875082|emb|CAI86303.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas haloplanktis TAC125]
Length = 365
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 178/269 (66%), Gaps = 9/269 (3%)
Query: 17 IWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESR 76
++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG N +DEE+
Sbjct: 1 MFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNTGTNSEDEEAN 60
Query: 77 QCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLS 136
Q + GLVIR L + SN+R ++L +YL +RNI+GI D+DTR +TR LR G+ G +
Sbjct: 61 QIWAKGLVIRDLPLLASNFRSEQSLDDYLKQRNILGIADIDTRKLTRILRDKGAQNGCII 120
Query: 137 TEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD----FNTHERNSKT 191
+ + + L+ ++++ + G+DL VS KE FEW ES+ W F T +
Sbjct: 121 AGDELDENKALQAAQAFPGLKGMDLAKVVSTKEMFEWRESS---WTLGEGFKTLNAADEK 177
Query: 192 YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYA 251
+ V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNGPGDP+ YA
Sbjct: 178 FHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNGPGDPAPCTYA 237
Query: 252 VAIVKELL-GKVPVFGICMGHQLLGQALG 279
+ +K LL ++P+FGIC+GHQLL A G
Sbjct: 238 IDAIKTLLETEIPIFGICLGHQLLALASG 266
>gi|344942524|ref|ZP_08781811.1| carbamoyl-phosphate synthase, small subunit [Methylobacter
tundripaludum SV96]
gi|344259811|gb|EGW20083.1| carbamoyl-phosphate synthase, small subunit [Methylobacter
tundripaludum SV96]
Length = 376
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 178/277 (64%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNT++TGYQEIL+DPSYA Q V +T PHIGN
Sbjct: 4 SALLVLEDGTVFNGVAIGADGCSVGEVVFNTAMTGYQEILSDPSYARQIVTLTYPHIGNV 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G +D+ES F +GLVIR L + SNWR +TL YL + N++ I D+DTR +TR LR
Sbjct: 64 GTTDEDDESVGVFASGLVIRDLPLLASNWRSTKTLQQYLLDNNVVAIADIDTRQLTRLLR 123
Query: 127 QDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF-NT 184
G+ G +++ E D + + G+DL +V+ P+EW E+ W N
Sbjct: 124 DKGAQRGCIMAGESVDVDAAKKAIEGFPGLKGMDLAKEVTVDRPYEWTENI---WHLQNG 180
Query: 185 H-ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
H + + T V+AYDFG+K NILR LA+ GC++ VVP+T PA L + PDGV SNGPG
Sbjct: 181 HTQAENLTKHVVAYDFGVKRNILRLLANRGCRVTVVPATTPAETVLAMNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ +K +L K+PVFGIC+GHQLL A G
Sbjct: 241 DPEPCTYAIEAIKTILEKKIPVFGICLGHQLLALASG 277
>gi|402566928|ref|YP_006616273.1| carbamoyl phosphate synthase small subunit [Burkholderia cepacia
GG4]
gi|402248125|gb|AFQ48579.1| carbamoyl phosphate synthase small subunit [Burkholderia cepacia
GG4]
Length = 381
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 183/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + I+ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGIVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS +PFEW ++ +W
Sbjct: 128 KGAQSGCILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLE 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + YRV+AYDFG+K+NILR LA GC + V+P+ A + L L PDG+ SNG
Sbjct: 181 SGYGMQEAPKYRVVAYDFGVKYNILRMLAERGCHVTVLPAEASAEDALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|383316618|ref|YP_005377460.1| carbamoyl-phosphate synthase small subunit [Frateuria aurantia DSM
6220]
gi|379043722|gb|AFC85778.1| carbamoyl-phosphate synthase, small subunit [Frateuria aurantia DSM
6220]
Length = 375
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 179/274 (65%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G VGEVVFNTSLTGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 ALLALEDGSLFHGHAVGAVGETVGEVVFNTSLTGYQEILTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD ES AGL++R + SNWR E+L +YL ++ I +DTR +TR LR
Sbjct: 65 VNPDDAESEGIHAAGLIVRDVPRLASNWRSTESLPDYLRRHGVVAIAGIDTRRLTRILRD 124
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G +++ ++ ++ L + + G+DL VS +E + W E + D D
Sbjct: 125 KGALAGCIVAGQDIDAEAALAKARAFPGLAGMDLAKVVSTRENYRWNEGSY-DLDKVAFA 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ +K ++V+AYDFG+K NILR LA GC++ VVP+ P +E L L+PDGV SNGPGDP
Sbjct: 184 QPTKRFKVVAYDFGVKRNILRMLADRGCEVTVVPAQTPVTEVLALRPDGVFLSNGPGDPQ 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ + +L K+P+FGIC+GHQ+LG A+G
Sbjct: 244 PCDYAIEAARAVLEAKIPLFGICLGHQILGLAVG 277
>gi|257482273|ref|ZP_05636314.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|289624590|ref|ZP_06457544.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aesculi str. NCPPB 3681]
gi|289646949|ref|ZP_06478292.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aesculi str. 2250]
gi|422583402|ref|ZP_16658527.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|422596747|ref|ZP_16671026.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|422682145|ref|ZP_16740412.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|330868234|gb|EGH02943.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330987043|gb|EGH85146.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|331011486|gb|EGH91542.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 378
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRSSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASDVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLQTEVPVFGICLGHQLLALAAG 280
>gi|386013927|ref|YP_005932204.1| carbamoyl-phosphate synthase small chain [Pseudomonas putida
BIRD-1]
gi|313500633|gb|ADR61999.1| Carbamoyl-phosphate synthase small chain [Pseudomonas putida
BIRD-1]
Length = 378
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +RS+ + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARSFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIDAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 280
>gi|86608712|ref|YP_477474.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557254|gb|ABD02211.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 395
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/285 (48%), Positives = 183/285 (64%), Gaps = 9/285 (3%)
Query: 2 PWNVAN-ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
PW A LVL DG+ + SFGA GT VGEVVFNT +TGYQE++TDPSY GQ V T
Sbjct: 14 PWQTRQPALLVLADGTSFAGWSFGAPGTAVGEVVFNTGMTGYQEVITDPSYRGQMVTFTC 73
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
P +GNTGVN DEES + +AG++ R++S S+WR TL +YL + I I VDTRA
Sbjct: 74 PELGNTGVNELDEESARPQVAGVIARNVSRLASSWRATSTLPHYLQQHGIPAIAGVDTRA 133
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSR-SWDIVGIDLISDVSGKEPFEWVESTKPD 179
+ RRLR G + G LST E+ Q LLE R + + G+ L+++V+ +P+EW+E T D
Sbjct: 134 LARRLRSQGVMNGALST-ETLDPQVLLERVRQAPSMQGLSLVAEVTTPQPYEWLEPTPAD 192
Query: 180 WDFNTHER---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
WD+ + RV+A DFG+K NILRRL YGC+++V+P+ + L PDG+
Sbjct: 193 WDYGRSQGIPIPEPPLRVVALDFGVKRNILRRLTRYGCRVMVLPANASPEQILSYNPDGI 252
Query: 237 LFSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP+A A+ + LL GK P+FGIC+GHQ+L ALG
Sbjct: 253 FLSNGPGDPAAETTAIRTTQALLQTGK-PLFGICLGHQILSLALG 296
>gi|163750813|ref|ZP_02158048.1| carbamoyl-phosphate synthase small subunit [Shewanella benthica
KT99]
gi|161329508|gb|EDQ00502.1| carbamoyl-phosphate synthase small subunit [Shewanella benthica
KT99]
Length = 381
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 178/284 (62%), Gaps = 19/284 (6%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFSGTAIGADGHAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR LS+ SN+R + LG YL N++GI D+DTR +TR LR
Sbjct: 64 GTNDEDTESDAIHACGLIIRELSLMASNFRSQQCLGEYLKANNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEW----------VEST 176
+ G+L G + E + L + G+DL +V+ ++ ++W +
Sbjct: 124 EKGALAGCILVGEDDIAKALAAAKAFPGLKGMDLAKEVTTEKAYQWRSGSWRLVGGLPED 183
Query: 177 KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
KP+ + Y+V+AYD+G+K NILR L GC + VVP+ PASE L +KPDG+
Sbjct: 184 KPESELK--------YKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPASEVLAMKPDGI 235
Query: 237 LFSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 236 FLSNGPGDPEPCDYAIKAIQEILKTEIPVFGICLGHQLLALACG 279
>gi|386827603|ref|ZP_10114710.1| carbamoyl-phosphate synthase, small subunit [Beggiatoa alba B18LD]
gi|386428487|gb|EIJ42315.1| carbamoyl-phosphate synthase, small subunit [Beggiatoa alba B18LD]
Length = 376
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/275 (48%), Positives = 178/275 (64%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ +S G +G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLALADGSLFYGESIGYTGQSVGEVVFNTAITGYQEILTDPSYYKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +DEES + F AGLVIR LS+ SNWR E L YL ++ I +DTR +TR LR+
Sbjct: 65 VNAEDEESTKVFAAGLVIRDLSLTVSNWRATEPLDAYLKRHQVVAIAGIDTRRLTRLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDF-NTH 185
G+ G + ++ S + ++ ++ + + G+DL V+ + W E +W ++
Sbjct: 125 KGAQNGCIVAGDNISPELAIQAAQQFAGLKGMDLAQAVTTPYTYSWEEG---EWQLGDSK 181
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + +RV+AYD+G+K NILR L GC + VVP+ PA + L KP GV SNGPGDP
Sbjct: 182 TPSHRPWRVVAYDYGVKRNILRMLVERGCHVTVVPAKTPARDVLAHKPHGVFLSNGPGDP 241
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A ++E+L KVPVFGIC+GHQLLG A G
Sbjct: 242 EPCDYAIAAIQEILATKVPVFGICLGHQLLGLASG 276
>gi|292489400|ref|YP_003532287.1| carbamoyl-phosphate synthase small subunit [Erwinia amylovora
CFBP1430]
gi|428786364|ref|ZP_19003844.1| carbamoyl-phosphate synthase small chain [Erwinia amylovora
ACW56400]
gi|291554834|emb|CBA22700.1| carbamoyl-phosphate synthase small chain [Erwinia amylovora
CFBP1430]
gi|426275210|gb|EKV52948.1| carbamoyl-phosphate synthase small chain [Erwinia amylovora
ACW56400]
Length = 391
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q AGLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNSADEESTQVHAAGLVIRDLPLIASNYRNEEGLSEYLTRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E+ LE +R++ + G+DL +V+ + + W++ + W
Sbjct: 131 LREKGAQNGCIIAGEAPDAAAALEKARTFPGLKGMDLAKEVTTPDAYTWLQGS---WTLE 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T +K Y V+AYD+G+K NILR L GC++ VVP+ A E LKL PDGV
Sbjct: 188 TALPTAKAEGELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTSAEEVLKLNPDGVFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ + LL +P+FGIC+GHQLL A G
Sbjct: 248 SNGPGDPEPCDYAITAINRLLETNIPLFGICLGHQLLALASG 289
>gi|226941821|ref|YP_002796895.1| carbamoyl phosphate synthase small subunit [Laribacter
hongkongensis HLHK9]
gi|226716748|gb|ACO75886.1| CarA [Laribacter hongkongensis HLHK9]
Length = 376
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R ++ GA+G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 6 AILALADGTVFRGRAIGATGLTVGEVVFNTAMTGYQEILTDPSYTRQLVTLTYPHIGNVG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESR F AGL+IR L + S++R AE+LG+YL + I D+DTR +TR LR+
Sbjct: 66 ANAEDVESRGVFAAGLIIRDLPLTHSSFRAAESLGDYLTRTGTVAIADIDTRKLTRILRE 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + E + +E++R + + G DL VS + W ++ +W
Sbjct: 126 GGAQAGCIMAGE-IDEARAVELARGFGSMAGQDLARVVSCDAAYPWQQA---EWRLKGGY 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+++ Y V+AYDFG+K+NILR LA GC++ VVP+T PA E L L PDGV SNGPGD
Sbjct: 182 VDQSEPKYHVVAYDFGVKYNILRMLAERGCRMTVVPATTPAEEVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA++ ++ LL +P+FGIC+GHQLLG A G
Sbjct: 242 PEPCDYAISAIRSLLQTGLPLFGICLGHQLLGLAAG 277
>gi|428219016|ref|YP_007103481.1| carbamoyl-phosphate synthase small subunit [Pseudanabaena sp. PCC
7367]
gi|427990798|gb|AFY71053.1| carbamoyl-phosphate synthase small subunit [Pseudanabaena sp. PCC
7367]
Length = 390
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/277 (45%), Positives = 182/277 (65%), Gaps = 5/277 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS +R +FGA+GT +GEVVFNT +TGYQE+LTDPSY+GQ + T P +GNTG
Sbjct: 6 AILVLADGSCYRGFAFGATGTAIGEVVFNTGMTGYQEVLTDPSYSGQIITFTYPELGNTG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
V +DEES + G + R+++ SNWR ++L +YL NI+GI +DTRA+TR+LR
Sbjct: 66 VTPEDEESDKPKAKGAIARNITYVPSNWRSQQSLPDYLKTHNIVGIAGIDTRALTRKLRS 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE- 186
G++ G +STE ++ L ++ + + G++L S + +EW E T W++ +
Sbjct: 126 MGAMNGGISTEILDPEELLAKVKSAPSMQGLNLAQGASTTQIYEWQEPTIAGWEYAEDDA 185
Query: 187 ---RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + V+A DFG+K NILRRL SYGC++IVVP+ P + L+ PDG+ SNGPG
Sbjct: 186 KQPSDGEQLTVVAIDFGVKRNILRRLVSYGCRVIVVPADTPTEKILEYNPDGIFLSNGPG 245
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP+AV V + LL P+FGIC+GHQ+LG ++G
Sbjct: 246 DPAAVTEGVKTAQALLKANKPMFGICLGHQILGLSMG 282
>gi|410619102|ref|ZP_11330016.1| carbamoyl-phosphate synthase small subunit [Glaciecola polaris LMG
21857]
gi|410161320|dbj|GAC34154.1| carbamoyl-phosphate synthase small subunit [Glaciecola polaris LMG
21857]
Length = 381
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/283 (48%), Positives = 184/283 (65%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGATGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES + + GL+IR L + S++R ++L YL NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDCESTKVWAKGLIIRDLPLLASSFRSEQSLSEYLRSNNILGIADIDTRRLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G +I V + E DQ+L L+ ++++ + G+DL +V+ + W + + W
Sbjct: 124 DKGAQNGCIIAVEAGSELPLDQQLALDNAKAFSGLKGLDLAKEVTTDSAYSWTDGS---W 180
Query: 181 DFNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
++T + V+AYDFG KHNILR L GC++ VVP+ A E L L PDGV
Sbjct: 181 TLGQGFNKNQTDLPFHVVAYDFGAKHNILRMLVDRGCRLTVVPAKTSAQEVLALNPDGVF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YAV +K LL K +P+FGIC+GHQLL A G
Sbjct: 241 LSNGPGDPEPCDYAVTAIKTLLDKDLPIFGICLGHQLLALASG 283
>gi|398961641|ref|ZP_10678855.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM30]
gi|398152224|gb|EJM40749.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM30]
Length = 378
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HSTIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|333901780|ref|YP_004475653.1| carbamoyl-phosphate synthase small subunit [Pseudomonas fulva 12-X]
gi|333117045|gb|AEF23559.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas fulva
12-X]
Length = 378
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGL+IR L + SNWR ++L +YL E + I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWAAGLIIRDLPLIASNWRNKQSLPDYLKENGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + ++++ LE++R + + G+DL +VS E +EW S W+ ++
Sbjct: 125 KGSQNGCILVGADATEEKALELARGFPGLKGMDLAKEVSCTERYEWRSSV---WNLKDDS 181
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + + Y V+AYD+G+K NILR L GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKLNILRMLVERGCRLTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETDIPVFGICLGHQLLALASG 280
>gi|292898381|ref|YP_003537750.1| carbamoyl-phosphate synthase small subunit [Erwinia amylovora ATCC
49946]
gi|291198229|emb|CBJ45335.1| carbamoyl-phosphate synthase small chain [Erwinia amylovora ATCC
49946]
Length = 382
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q AGLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNSADEESTQVHAAGLVIRDLPLIASNYRNEEGLSEYLTRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E+ LE +R++ + G+DL +V+ + + W++ + W
Sbjct: 122 LREKGAQNGCIIAGEAPDAAAALEKARTFPGLKGMDLAKEVTTPDAYTWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T +K Y V+AYD+G+K NILR L GC++ VVP+ A E LKL PDGV
Sbjct: 179 TALPTAKAEGELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTSAEEVLKLNPDGVFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ + LL +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAINRLLETNIPLFGICLGHQLLALASG 280
>gi|402845038|ref|ZP_10893385.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. OBRC7]
gi|402272638|gb|EJU21856.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. OBRC7]
Length = 382
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G+N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGINAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|146308636|ref|YP_001189101.1| carbamoyl phosphate synthase small subunit [Pseudomonas mendocina
ymp]
gi|145576837|gb|ABP86369.1| carbamoyl-phosphate synthase small subunit [Pseudomonas mendocina
ymp]
Length = 382
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 9 AILALADGSIFRGDSIGADGQTIGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGL+IR L + +SNWR + L YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESNRVWAAGLIIRDLPLISSNWRDKQPLDEYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + + ++++ LE++RS+ + G+DL +V+ + +EW S W+ ++
Sbjct: 129 KGSQNGCILVGDDATEEKALELARSFPGLKGMDLAKEVTCDKSYEWRSSV---WNLESDS 185
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 186 HPEIAAADLPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGVFLSNG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIKAIKEILETEIPVFGICLGHQLLALASG 284
>gi|398898720|ref|ZP_10648521.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM50]
gi|398183782|gb|EJM71255.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM50]
Length = 378
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA+E L LKPDGV SNG
Sbjct: 182 HATLEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAAEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|421728332|ref|ZP_16167487.1| carbamoyl phosphate synthase small subunit [Klebsiella oxytoca
M5al]
gi|423127342|ref|ZP_17115021.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5250]
gi|376394381|gb|EHT07031.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5250]
gi|410371013|gb|EKP25739.1| carbamoyl phosphate synthase small subunit [Klebsiella oxytoca
M5al]
Length = 382
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAITKFLETDIPVFGICLGHQLLALASG 280
>gi|294142077|ref|YP_003558055.1| carbamoyl-phosphate synthase small subunit [Shewanella violacea
DSS12]
gi|293328546|dbj|BAJ03277.1| carbamoyl-phosphate synthase, small subunit [Shewanella violacea
DSS12]
Length = 381
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/284 (46%), Positives = 176/284 (61%), Gaps = 19/284 (6%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFSGTAIGADGHAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R + LG YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNDEDTESDAVHACGLIIRDLPLLASNFRNQQCLGEYLKANNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEW----------VEST 176
+ G+ G + E + L E + G+DL +V+ + ++W +
Sbjct: 124 EKGAQAGCILVGEDDIAKALAEAKAFPGLKGMDLAKEVTTDKAYQWRSGSWRLVGGLPED 183
Query: 177 KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
KP+ + Y+V+AYD+G+K NILR L GC + VVP+ PASE L +KPDG+
Sbjct: 184 KPESELK--------YKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPASEVLAMKPDGI 235
Query: 237 LFSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 236 FLSNGPGDPEPCDYAIKAIQEILKTEIPVFGICLGHQLLALASG 279
>gi|104780015|ref|YP_606513.1| carbamoyl phosphate synthase small subunit [Pseudomonas entomophila
L48]
gi|95109002|emb|CAK13698.1| carbamoyl-phosphate synthase, small chain [Pseudomonas entomophila
L48]
Length = 378
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L +YL E N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPDYLKEHNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R++ + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARAFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIEAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILDTEIPVFGICLGHQLLALASG 280
>gi|398856599|ref|ZP_10612319.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM79]
gi|398242986|gb|EJN28585.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM79]
Length = 378
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA+E L LKPDGV SNG
Sbjct: 182 HATLEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAAEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|88705673|ref|ZP_01103383.1| Carbamoyl-phosphate synthase small chain [Congregibacter litoralis
KT71]
gi|88700186|gb|EAQ97295.1| Carbamoyl-phosphate synthase small chain [Congregibacter litoralis
KT71]
Length = 378
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/278 (48%), Positives = 179/278 (64%), Gaps = 9/278 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++ S GA+ T VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGSVFHGTSIGAAATSVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + +GLVIR L + SN+R + L +YL +R ++GI ++DTR +TR LR
Sbjct: 65 TNAEDEESSHIWASGLVIRDLPLLASNFRNTQALDDYLRDRGVVGIAEIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G L ++ + +++ + + G+DL +V+ E + W T W
Sbjct: 125 KGAQRGCLMATDTLDVEAARALAKDFGGLKGLDLAKEVTTAESYSW---TAGSWQLGEGH 181
Query: 187 RNSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ + V+AYDFG+K NILR LA GC++ VVP+ ASE L LKPDGV SNGP
Sbjct: 182 ADPAAPEMPWHVVAYDFGVKRNILRMLADRGCRLTVVPAKTSASEVLALKPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GDP YA+A ++ELL +P+FGIC+GHQLL A G
Sbjct: 242 GDPEPCDYAIAAIRELLDSDIPLFGICLGHQLLALASG 279
>gi|71906577|ref|YP_284164.1| carbamoyl-phosphate synthase small subunit [Dechloromonas aromatica
RCB]
gi|71846198|gb|AAZ45694.1| carbamoyl-phosphate synthase small subunit [Dechloromonas aromatica
RCB]
Length = 385
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 182/278 (65%), Gaps = 13/278 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG++++ +S GA G GEVVFNT+++GYQEILTDPSY Q V +T PHIGNTG
Sbjct: 10 AILALADGTVFKGQSIGADGVTSGEVVFNTAMSGYQEILTDPSYCRQIVTLTYPHIGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES + AGLVIR L + SNWR + L +YL + I+ I +DTR +TR LR+
Sbjct: 70 CNAEDFESNANYAAGLVIRDLPLVASNWRTQDDLSSYLKKHGIVAIAGIDTRKLTRILRE 129
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + +ESK+ L M+R++ + G+DL VS KE + W E+ +W
Sbjct: 130 KGAQAGCILAGEVDESKA----LAMARAFPGLNGMDLAKVVSAKEVYPWTEA---EWTLK 182
Query: 184 THERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
++ ++ + V+AYDFG+K NILR LA GC++ VVP+ PA++ L +KPDGV SNGP
Sbjct: 183 GYKAAAEPRFHVVAYDFGVKRNILRMLAERGCRLTVVPAQTPAADVLAMKPDGVFLSNGP 242
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA+A ++E L + VP FGIC+GHQLL A G
Sbjct: 243 GDPEPCDYAIAAIREFLERGVPTFGICLGHQLLALASG 280
>gi|421502063|ref|ZP_15949019.1| carbamoyl phosphate synthase small subunit [Pseudomonas mendocina
DLHK]
gi|400347347|gb|EJO95701.1| carbamoyl phosphate synthase small subunit [Pseudomonas mendocina
DLHK]
Length = 382
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 9 AILALADGSIFRGDSIGADGQTIGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGL+IR L + +SNWR + L YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESNRVWAAGLIIRDLPLISSNWRDKQPLDEYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + + ++++ LE++RS+ + G+DL +V+ + +EW S W+ ++
Sbjct: 129 KGSQNGCILVGDDATEEKALELARSFPGLKGMDLAKEVTCDKSYEWRSSV---WNLESDS 185
Query: 185 HERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 186 HPEIAAADLPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGVFLSNG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIKAIKEILETEIPVFGICLGHQLLALASG 284
>gi|359785307|ref|ZP_09288460.1| carbamoyl phosphate synthase small subunit [Halomonas sp. GFAJ-1]
gi|359297422|gb|EHK61657.1| carbamoyl phosphate synthase small subunit [Halomonas sp. GFAJ-1]
Length = 381
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 183/282 (64%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILALEDGSVFHGTAIGADGVTSGEVVFNTAMTGYQEILTDPSYTRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
+N +D ES AGLVIR L + S++R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 65 INSEDVESASIAAAGLVIRDLPLMASSFRSEQSLSDYLKSQNILGIADIDTRRLTRILRD 124
Query: 127 ---QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD- 181
Q+G+++ E S + + L ++++ + G+DL +VS KE +EW E +W
Sbjct: 125 KGAQNGAILAGADAEGSDAVERALAAAKAFPGLKGMDLAKEVSCKEAYEWSEG---EWTL 181
Query: 182 ---FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+A+D+G+K NILR LA+ GC++ VVP+ PA+E L + PDGV
Sbjct: 182 GEGYADMTKRERPYHVVAFDYGVKFNILRMLAARGCRLTVVPAQTPAAEVLAMNPDGVFL 241
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+NGPGDP YA+ ++E+L PVFGIC+GHQLL A G
Sbjct: 242 ANGPGDPEPCDYAIKAIQEVLETDTPVFGICLGHQLLALASG 283
>gi|71733744|ref|YP_276323.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71554297|gb|AAZ33508.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 378
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDDISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRSSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASDVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLQTEVPVFGICLGHQLLALAAG 280
>gi|423111531|ref|ZP_17099225.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5243]
gi|423112451|ref|ZP_17100142.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5245]
gi|376376730|gb|EHS89507.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5243]
gi|376390828|gb|EHT03510.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5245]
Length = 382
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L VPVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIEKFLETSVPVFGICLGHQLLALASG 280
>gi|33862926|ref|NP_894486.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9313]
gi|33634843|emb|CAE20828.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. MIT 9313]
Length = 379
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/275 (44%), Positives = 184/275 (66%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L+L DG++ ++FG G +GEVVFNT +TGYQE+LTDPSY+GQ V T P +GNT
Sbjct: 8 SALLMLADGTVLEGEAFGHCGDAMGEVVFNTGMTGYQEVLTDPSYSGQLVTFTYPELGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DD+ES + G++ R LS S+WRC ++L +L E+ ++GI VDTRA+ R LR
Sbjct: 68 GVNLDDQESSRPHARGVIARQLSPTPSSWRCQQSLQTWLEEKRVVGISGVDTRALVRHLR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G++ GV+S+ S Q + + ++ + G++L VS K+P+ W + +D +
Sbjct: 128 EVGAMNGVISSNGSTPKQLMELLQQAPSMEGLNLADQVSTKDPYRWRSTCAVGFDQRLKQ 187
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ Y V+A DFGIK IL RL ++GC++ V+P++ + L +P+GV SNGPGDP+
Sbjct: 188 QIDSPYHVVAIDFGIKRAILDRLVAHGCEVTVLPASSDLATVLSSQPEGVFLSNGPGDPA 247
Query: 247 AVPYAVAIVKELLGKV--PVFGICMGHQLLGQALG 279
AV +A+VK+LL KV P+FGIC+GHQ++G A+G
Sbjct: 248 AVTGGIALVKDLLNKVDIPLFGICLGHQIIGLAMG 282
>gi|209517191|ref|ZP_03266036.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp. H160]
gi|209502327|gb|EEA02338.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp. H160]
Length = 384
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 182/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R +L YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERSLPQYLQDEGVVAIAGIDTRKLTRVLRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E +RS+ + G+DL VS KE +EW TK +W
Sbjct: 128 KGAQNGAILAGSDDEAKA----IEFARSFPGLAGMDLAKVVSTKETYEW---TKTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
T E+ + YRV+A+D+G+K NILR LA GC + V+P+ A++ L L PDGV SNG
Sbjct: 181 TGYGEQKAPKYRVVAFDYGVKQNILRMLAERGCHVTVLPAQSSAADALALNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + +P FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATKEFIERGIPTFGICLGHQIMGLAVG 279
>gi|387130170|ref|YP_006293060.1| carbamoyl-phosphate synthase small subunit [Methylophaga sp. JAM7]
gi|386271459|gb|AFJ02373.1| Carbamoyl-phosphate synthase small chain [Methylophaga sp. JAM7]
Length = 376
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 176/275 (64%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG+++ +S GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 ALLALEDGTVFHGESIGAVGQSVGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N DDEES Q +GL+IR LS S+WR L YLA+ N++G+ +DTR +TR LR+
Sbjct: 65 ANPDDEESDQIHCSGLIIRELSPVVSSWRGEAALDKYLAKHNVVGLAGIDTRKLTRLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ ++ +R + + G+DL +VS + +EW ST W +
Sbjct: 125 KGAQKGCIVAGDNIDVNAAIDAARGFAGLKGMDLAKEVSTETSYEWTSST---WQLDGQP 181
Query: 187 RNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ ++T + V+AYD+GIK NI+R L GC++ VVP+ P E KL PDG+ SNGPGDP
Sbjct: 182 KQAETRFHVVAYDYGIKKNIMRMLVERGCKLTVVPAQMPPEEVEKLNPDGIFLSNGPGDP 241
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ ++ L K VP+FGIC+GHQLL A G
Sbjct: 242 EPCDYAIKSIQYFLDKNVPMFGICLGHQLLALACG 276
>gi|410088292|ref|ZP_11284987.1| Carbamoyl-phosphate synthase small chain [Morganella morganii SC01]
gi|409765214|gb|EKN49329.1| Carbamoyl-phosphate synthase small chain [Morganella morganii SC01]
Length = 379
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL+DG+ + ++ GA G GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SAILVLQDGTTFHGRAIGAEGAVTGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N DEES + GLVIR L + TSN+R E+L YL RN++ I D+DTR +TR LR
Sbjct: 64 GTNSADEESPDVYAQGLVIRDLPLTTSNFRSEESLSEYLKHRNVVAIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + E L+ ++S+ + G+DL +V+ +P+ W + + W
Sbjct: 124 EKGAQNGCIIAGEHPDAALALKNAQSFSGLNGLDLAKEVTTAQPYSWTQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
KT + V+AYDFG K NILR L GC++ VVP+ PA E LK+ PDG+ SN
Sbjct: 181 LPADKTAEELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPAEEVLKMAPDGIFLSN 240
Query: 241 GPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+ YA+ AI + L +P+FGIC+GHQLL A G
Sbjct: 241 GPGDPAPCDYAIEAITRFLETDIPLFGICLGHQLLALASG 280
>gi|94969221|ref|YP_591269.1| carbamoyl-phosphate synthase small subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94551271|gb|ABF41195.1| carbamoyl-phosphate synthase small subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 373
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 176/276 (63%), Gaps = 10/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG ++R K +GA+ +GEVVFNTS+TGYQEI TDPSYAGQ V++ NP IGN G
Sbjct: 3 AILALEDGRVFRGKGYGAASECIGEVVFNTSITGYQEIFTDPSYAGQIVVLANPQIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE+ + ++ GL++R S TSNWR ++ +YL N+ + ++DTRA+ R LR
Sbjct: 63 TNPEDEEAVKPYIEGLIVREFSKVTSNWRSSDDANDYLERHNVPVLAEIDTRALVRHLRD 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEW----VESTKPDWDFN 183
+G + GV+ST E + + + + G DL V+ + + W +E KP
Sbjct: 123 NGVMRGVISTTEKDVAKLVAKAKSIPKMDGTDLAKVVTTPKLYNWAKGPIEIGKPT---- 178
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
E ++V+AYDFGIKHNILR L C + VVP+ A + L +KPDGV SNGPG
Sbjct: 179 --EIAQPRHKVVAYDFGIKHNILRMLTGSCCDVTVVPAQTSAEDVLAMKPDGVFLSNGPG 236
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP V YA ++ L+G+VPVFGIC+GHQL+G ALG
Sbjct: 237 DPEPVTYAQKSIQGLMGRVPVFGICLGHQLVGLALG 272
>gi|219871953|ref|YP_002476328.1| carbamoyl phosphate synthase small subunit [Haemophilus parasuis
SH0165]
gi|219692157|gb|ACL33380.1| carbamoyl phosphate synthase small subunit [Haemophilus parasuis
SH0165]
Length = 374
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 179/276 (64%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ KS G G +GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGKSIGYQGHTIGEVVFNTAMTGYQEILTDPSYTNQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE+ + + AGL+IR L + SN+R +L +YL + I+ I D+DTR +TR LR
Sbjct: 65 TNSEDEEADKVYAAGLIIRDLPLIHSNFRANSSLSDYLVKHKIVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + + + + LE++ S+ + G DL +V+ KE ++W E +W
Sbjct: 125 KGAQAGCIYVGDDVA--KALELANSFGSMAGQDLAKEVTCKELYQWKEG---EWQLGKGY 179
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + + V+AYDFG+K NILR LA GC+I VVP+T A L L PDG+ SNGPGD
Sbjct: 180 VQQTTPEFHVVAYDFGVKRNILRMLAERGCRITVVPATTSAEAVLALNPDGIFLSNGPGD 239
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+ +++LL K P+FGIC+GHQLLG A G
Sbjct: 240 PEPCTYAITAIQKLLATKKPIFGICLGHQLLGLAAG 275
>gi|375258926|ref|YP_005018096.1| carbamoyl phosphate synthase small subunit [Klebsiella oxytoca KCTC
1686]
gi|365908404|gb|AEX03857.1| carbamoyl phosphate synthase small subunit [Klebsiella oxytoca KCTC
1686]
Length = 382
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEE+ Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEEASQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIAAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|323491019|ref|ZP_08096211.1| carbamoyl phosphate synthase small subunit [Vibrio brasiliensis LMG
20546]
gi|323314683|gb|EGA67755.1| carbamoyl phosphate synthase small subunit [Vibrio brasiliensis LMG
20546]
Length = 379
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGTSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R +TL +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESSSIHAQGLVIRDLPLIASNFRNEQTLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAQDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|344338489|ref|ZP_08769421.1| carbamoyl-phosphate synthase, small subunit [Thiocapsa marina 5811]
gi|343801771|gb|EGV19713.1| carbamoyl-phosphate synthase, small subunit [Thiocapsa marina 5811]
Length = 402
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 178/280 (63%), Gaps = 10/280 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R S GA G+ VGEVVFNT+++GYQEILTDPSY Q V +T PHIGN G
Sbjct: 26 AVLVLEDGSVFRGMSIGADGSSVGEVVFNTAMSGYQEILTDPSYLRQLVTLTYPHIGNVG 85
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + AGL+IR L + SN+R E L YL + I+GI D+DTR +TR LR+
Sbjct: 86 TNPEDEESDRVQAAGLIIRDLPLLPSNFRMTERLDAYLRRQGIVGIADIDTRRLTRLLRE 145
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST------KPDW 180
G+ G L + + L ++ + + G+DL + S E + W + P+
Sbjct: 146 KGAQNGCLQAGDGIDEAAALRAAQGFPGLKGMDLAQEASTSETYSWTQGVWVLGEGHPES 205
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+R + V+AYD+GIK NILR LAS GC + VVP+ PA+ L LKPDGV SN
Sbjct: 206 IHPVGDR--LPFHVVAYDYGIKRNILRMLASRGCHVTVVPAHMPATTVLGLKPDGVFLSN 263
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+A ++ELL +P+FGIC+GHQLLG A G
Sbjct: 264 GPGDPEPCDYAIAAIRELLDTDMPLFGICLGHQLLGLASG 303
>gi|119775636|ref|YP_928376.1| carbamoyl phosphate synthase small subunit [Shewanella amazonensis
SB2B]
gi|119768136|gb|ABM00707.1| carbamoyl-phosphate synthase small subunit [Shewanella amazonensis
SB2B]
Length = 381
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 180/280 (64%), Gaps = 11/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTLFSGTAIGADGIAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + S++R ++L +YL N++GI D+DTR +TR LR
Sbjct: 64 GTNDEDTESSAVHACGLIIRDLPLIASSFRSTQSLSDYLKANNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEW------VESTKPDW 180
+ G+ G + + SD+ L + G+DL +V+ E ++W +E P
Sbjct: 124 EKGAQAGCILVGDLDSDKALAAAKAFPGLKGMDLAKEVTTAERYQWRSGSWRLEGGLPS- 182
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+T E K ++V+AYD+G+K NILR L GC + VVP+ PASE L + PDGV SN
Sbjct: 183 --DTPESELK-FKVVAYDYGVKTNILRMLVDRGCDVTVVPAKTPASEVLAMNPDGVFLSN 239
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP YA+A ++E+L +PVFGIC+GHQLLG A G
Sbjct: 240 GPGDPEPCDYAIAAIQEILTTDIPVFGICLGHQLLGLASG 279
>gi|33865560|ref|NP_897119.1| carbamoyl phosphate synthase small subunit [Synechococcus sp. WH
8102]
gi|60389729|sp|Q7U7F9.1|CARA_SYNPX RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|33632729|emb|CAE07541.1| carbamoyl-phosphate synthase small chain [Synechococcus sp. WH
8102]
Length = 383
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 175/275 (63%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG++ +FG G+ VGEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 8 QAHLVLADGTVLTGDAFGHRGSVVGEVVFNTGMTGYQEVLTDPSYAGQLVTFTYPELGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DD+E+ G++ R L+ SNWRC+E+L N++ ++GI VDTRA+ RRLR
Sbjct: 68 GVNGDDQEADHPHARGVIARQLAPCASNWRCSESLDNWMERHGLVGICGVDTRALVRRLR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ GV+S++ L E+ + + G++L S VS EP+EW + +D +
Sbjct: 128 DGGAINGVISSDGRSPADLLAEVRHAPSMEGLNLASQVSTTEPYEWSSPCRVGFDQRLKQ 187
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
YRV+A DFGIK IL RL ++GC + V+PS + +P+GV SNGPGDP+
Sbjct: 188 HPDLPYRVVAIDFGIKRAILDRLVAHGCAVTVLPSDADLDTVMSHQPEGVFLSNGPGDPA 247
Query: 247 AVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
AV + + + LL +P+FGIC+GHQ+LG ALG
Sbjct: 248 AVDSGIDLARSLLERANLPLFGICLGHQILGLALG 282
>gi|134282730|ref|ZP_01769433.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 305]
gi|134245816|gb|EBA45907.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
pseudomallei 305]
Length = 381
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R A TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMARTLGDYLRDEGVVVIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + L ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDETKALALARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+A+DFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAFDFGVKYNILRMLAERGCHVSVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G ALG
Sbjct: 244 PQPCDYAIAATREFIERGVPTFGICLGHQIMGLALG 279
>gi|66047419|ref|YP_237260.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. syringae B728a]
gi|422671900|ref|ZP_16731265.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aceris str. M302273]
gi|63258126|gb|AAY39222.1| carbamoyl-phosphate synthase small subunit [Pseudomonas syringae
pv. syringae B728a]
gi|330969639|gb|EGH69705.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. aceris str. M302273]
Length = 378
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ +++ + +R + + G+DL +V K+ +EW S WD T
Sbjct: 125 KGAQNGCILAGDNITEEAAIAAARGFPGLKGMDLAKEVCTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PASE L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASEVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIREVLETDIPVFGICLGHQLLALAAG 280
>gi|375112936|ref|ZP_09758106.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
gi|322713082|gb|EFZ04653.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SCSA50]
Length = 391
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 178/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+LL +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKLLQTDIPVFGICLGHQLLALASG 289
>gi|423106377|ref|ZP_17094078.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5242]
gi|376377814|gb|EHS90581.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5242]
Length = 382
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|359394210|ref|ZP_09187263.1| Carbamoyl-phosphate synthase small chain [Halomonas boliviensis
LC1]
gi|357971457|gb|EHJ93902.1| Carbamoyl-phosphate synthase small chain [Halomonas boliviensis
LC1]
Length = 386
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 188/282 (66%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 10 AILALEDGSVFHGIAIGADGLTSGEVVFNTAMTGYQEILTDPSYTRQIVTLTYPHIGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES AGLVIR L + S++R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 70 INAEDIESASIAAAGLVIRDLPLMASSFRSEQSLSDYLKSQNVLGIADIDTRRLTRILRD 129
Query: 128 DGSLIG-VLSTEESKSDQEL---LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD- 181
G+ G +L+ ++++ D + L+ ++++ + G+DL +VS KE +EW E +W
Sbjct: 130 KGAQNGAILAGDDAEGDDAVARALKAAKAFPGLKGMDLAKEVSCKEAYEWSEG---EWTL 186
Query: 182 ---FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ ++ + Y V+AYD+G+K NILR LA+ GC++ VVP+ PA++ L + PDGV
Sbjct: 187 GEGYADASKSERPYHVVAYDYGVKFNILRMLAARGCRLTVVPAQTPAADVLAMNPDGVFL 246
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
+NGPGDP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 247 ANGPGDPEPCDYAIKAIQEVLKTDIPVFGICLGHQLLALAAG 288
>gi|90416145|ref|ZP_01224077.1| carbamoyl-phosphate synthase small subunit [gamma proteobacterium
HTCC2207]
gi|90331870|gb|EAS47084.1| carbamoyl-phosphate synthase small subunit [marine gamma
proteobacterium HTCC2207]
Length = 380
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 178/277 (64%), Gaps = 8/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R + G+ G VGEVVFNT+LTGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 9 AVLALADGTIFRGTAIGSDGISVGEVVFNTALTGYQEILTDPSYAQQIVTLTYPHIGNVG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + + +GLVIR L + SN+R + L +YL + NI+GI D+DTR +TR LR+
Sbjct: 69 VNDEDAESDRIWASGLVIRDLPLVLSNFRSQQALDDYLKDSNILGIADIDTRKLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF----N 183
G+ G + + + L + G+DL +V+ + ++W E + W+
Sbjct: 129 TGAQNGCIMAGDVDDETALAAARGFAGLKGMDLAKEVTTETTYQWSEHS---WELGEGHK 185
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + Y+V+AYDFG+K NILR L C++IVVP+ PASE L ++PDG+ SNGPG
Sbjct: 186 PQDPATTKYKVVAYDFGVKRNILRMLVDLNCELIVVPAKTPASEVLAMQPDGIFLSNGPG 245
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 246 DPEPCDYAIDAIREILETDIPVFGICLGHQLLALASG 282
>gi|421616632|ref|ZP_16057635.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
KOS6]
gi|409781384|gb|EKN60984.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
KOS6]
Length = 382
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 182/276 (65%), Gaps = 4/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGHTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLLASNWRNKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + E ++++ LE++RS+ + G+DL +VS KE +EW S D E
Sbjct: 129 KGAQNGCILAGEDATEEKALELARSFPGLKGMDLAKEVSVKERYEWRSSVWCLKDDGHAE 188
Query: 187 --RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPGD
Sbjct: 189 IPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPGD 248
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 249 PEPCDYAIKAIREVLETDIPVFGICLGHQLLALASG 284
>gi|157376536|ref|YP_001475136.1| carbamoyl phosphate synthase small subunit [Shewanella sediminis
HAW-EB3]
gi|157318910|gb|ABV38008.1| carbamoyl-phosphate synthase, small subunit [Shewanella sediminis
HAW-EB3]
Length = 385
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 179/280 (63%), Gaps = 11/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 8 SALLVLEDGTVFSGTAIGADGHAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R ++L +YL NI+GI D+DTR +TR LR
Sbjct: 68 GTNDEDTESDSVHARGLIIRDLPLIASNFRNKQSLSDYLKANNIVGIADIDTRKLTRILR 127
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST------KPDW 180
+ G+L G + E + L E + + G+DL +V+ + ++W + PD
Sbjct: 128 EKGALAGCILVGEQDVAKALAEANAFPGLKGMDLAKEVTTETSYQWRSGSWRLVGGLPD- 186
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+T E K Y+V+AYD+G+K NILR L GC + VVP+ PAS L + PDG+ SN
Sbjct: 187 --DTPESELK-YKVVAYDYGVKRNILRMLVDRGCDVTVVPAKTPASTVLAMNPDGIFLSN 243
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+A ++E+L +PVFGIC+GHQLL A G
Sbjct: 244 GPGDPEPCDYAIAAIQEILKTDIPVFGICLGHQLLALASG 283
>gi|318041273|ref|ZP_07973229.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
CB0101]
Length = 381
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 179/274 (65%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG + R ++FGASGT VGEVVFNT ++GYQE++TDPSY+GQ V T P +GNTG
Sbjct: 10 ALLVLADGLVLRGEAFGASGTAVGEVVFNTGMSGYQEVMTDPSYSGQLVTFTYPELGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN D+E+ + G++ R L+ S+WRC +TL +L N++GI +DTRA+ R LR+
Sbjct: 70 VNSADQEADAPHVRGVIARELAPVPSSWRCEDTLEAWLQRHNVVGIRGIDTRALVRHLRE 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G +ST+ S Q L ++ + + G++L VS ++W +D
Sbjct: 130 GGAINGAISTDGSTPQQLLDQVRSAPSMAGLNLAQTVSTDAAYDWSSLCPAAFDQRLQSN 189
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
+ YRV+A DFGIK IL RLA++GC I V+P+ ++ L L+P+GV SNGPGDPSA
Sbjct: 190 PATPYRVVAIDFGIKRAILERLAAHGCAITVLPADATLAQVLALQPEGVFLSNGPGDPSA 249
Query: 248 VPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
V + + + LL + +PVFGIC+GHQ+LG A+G
Sbjct: 250 VTTGIELARGLLAQSNLPVFGICLGHQILGLAMG 283
>gi|261379316|ref|ZP_05983889.1| carbamoyl-phosphate synthase, small subunit [Neisseria subflava
NJ9703]
gi|284797752|gb|EFC53099.1| carbamoyl-phosphate synthase, small subunit [Neisseria subflava
NJ9703]
Length = 376
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGSQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWKLGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A E L L PDGV SNGPGD
Sbjct: 182 VTPSEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEEVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCDYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|116621512|ref|YP_823668.1| carbamoyl-phosphate synthase small subunit [Candidatus Solibacter
usitatus Ellin6076]
gi|116224674|gb|ABJ83383.1| carbamoyl-phosphate synthase small subunit [Candidatus Solibacter
usitatus Ellin6076]
Length = 375
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/277 (49%), Positives = 181/277 (65%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ +SFGA + GEVVFNT+LTGYQE+ TDPSY+GQ V++TNP IGN G
Sbjct: 4 AILALEDGSVFEGRSFGAPTERSGEVVFNTALTGYQEVFTDPSYSGQIVILTNPQIGNYG 63
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D ES+ ++ GLV+R S SNWR + +LA + + D+DTRA+ R LR
Sbjct: 64 TSSRDNESKGPYIEGLVVREFSSIASNWRSDSSADRFLANSGVPIVSDLDTRALVRHLRT 123
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEW---VESTKP-DWDF 182
G + GVLS ES + Q+L+E +R+ + G+DL S V+ E +EW VE P D
Sbjct: 124 RGVMRGVLSAVESDA-QKLVEKARNIPTMTGLDLASRVTTAERYEWTKTVEQCSPSDLVG 182
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T E Y V+AYDFGIKHNILRRL GC++ VVP+ A + L L PDG+ SNGP
Sbjct: 183 KTAE---PLYNVVAYDFGIKHNILRRLVHAGCRVTVVPALTSAEDVLALNPDGIFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + V +++L+GK P+FGIC+G+QLLG A+G
Sbjct: 240 GDPEPLVPQVNNIRKLIGKKPIFGICLGNQLLGLAMG 276
>gi|448747658|ref|ZP_21729314.1| Carbamoyl-phosphate synthase, small subunit [Halomonas titanicae
BH1]
gi|445564770|gb|ELY20886.1| Carbamoyl-phosphate synthase, small subunit [Halomonas titanicae
BH1]
Length = 386
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 185/282 (65%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 10 AILALEDGSVFHGIAIGADGLTSGEVVFNTAMTGYQEILTDPSYTRQIVTLTYPHIGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
+N +D ES AGLVIR L + S++R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 70 INAEDIESASIAAAGLVIRDLPLMASSFRSEQSLSDYLKSQNVLGIADIDTRRLTRILRD 129
Query: 127 ---QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD- 181
Q+G+++ + E + LE ++++ + G+DL +VS K+ +EW E +W
Sbjct: 130 KGAQNGAILAGVDAEGDGAVTRALEAAKAFPGLKGMDLAKEVSCKQAYEWSEG---EWTL 186
Query: 182 ---FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ ++ + Y V+AYD+G+K NILR LA+ GC++ VVP+ PA+E L + PDGV
Sbjct: 187 GEGYADASKSERPYHVVAYDYGVKFNILRMLAARGCRLTVVPAQTPAAEVLAMNPDGVFL 246
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+NGPGDP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 247 ANGPGDPEPCDYAIKAIQDVLETNIPVFGICLGHQLLALAAG 288
>gi|392375188|ref|YP_003207021.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Candidatus Methylomirabilis oxyfera]
gi|258592881|emb|CBE69190.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Candidatus Methylomirabilis oxyfera]
Length = 399
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 178/300 (59%), Gaps = 28/300 (9%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A L L DG+++ +FGA G VGEVVFNTS+TGYQE+LTDPSY GQ V+MT P IG
Sbjct: 1 MKQALLALADGTVFEGLAFGAEGETVGEVVFNTSMTGYQEVLTDPSYKGQMVVMTYPLIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G+ +D ES + G +++ SNWR TL +YL E++I+GI +DTRA+TR
Sbjct: 61 NYGITPEDVESSGLAVEGFIVKEACAHPSNWRSTRTLDSYLKEQDIVGIQGIDTRALTRH 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
LR G++ GV+ST++ D + + S ++G DL+ +V+ P+ W E W +
Sbjct: 121 LRDYGAMEGVISTQDLDPDSLIAKAKASPGLIGCDLVKEVACTSPYTWHEGP---WRLSN 177
Query: 185 HERNS-------------------------KTYRVIAYDFGIKHNILRRLASYGCQIIVV 219
++S + Y V+AYD GIK NILR+L GC + VV
Sbjct: 178 SGKDSVECRVSSVEPADQLKLFPPPSTLHPRPYNVVAYDCGIKQNILRKLIEAGCDVTVV 237
Query: 220 PSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P AS L L PDGV SNGPGDP VPY + V++L+ K+P+FGIC+GHQ+LG A G
Sbjct: 238 PPDTSASTVLSLAPDGVFLSNGPGDPEGVPYLIDNVRKLIDKIPIFGICLGHQILGLAFG 297
>gi|398929658|ref|ZP_10664093.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM48]
gi|398166727|gb|EJM54819.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM48]
Length = 378
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKESYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|315126860|ref|YP_004068863.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas sp. SM9913]
gi|315015374|gb|ADT68712.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas sp. SM9913]
Length = 365
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/269 (48%), Positives = 175/269 (65%), Gaps = 9/269 (3%)
Query: 17 IWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESR 76
++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG N +DEE+
Sbjct: 1 MFRGTAIGADGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNTGTNSEDEEAS 60
Query: 77 QCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLS 136
+ GLVIR L + SN+R ++L +YL ERNI+GI D+DTR +TR LR G+ G +
Sbjct: 61 HIWAKGLVIRDLPLLASNFRNEQSLDDYLKERNILGIADIDTRKLTRILRDKGAQNGCIV 120
Query: 137 TEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD----FNTHERNSKT 191
+ +++ LE ++++ + G+DL VS KE FEW ES+ W F T + +
Sbjct: 121 AGDELDEKKALEAAQAFPGLKGMDLAKVVSTKENFEWRESS---WTLGEGFKTLHADDEK 177
Query: 192 YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYA 251
+ V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNGPGDP YA
Sbjct: 178 FHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNGPGDPEPCTYA 237
Query: 252 VAIVKELL-GKVPVFGICMGHQLLGQALG 279
+ +K L P+FGIC+GHQLL A G
Sbjct: 238 IDAIKTFLETDTPIFGICLGHQLLALASG 266
>gi|62178630|ref|YP_215047.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|62126263|gb|AAX63966.1| carbamoyl-phosphate synthetase, glutamine-hydrolysing small subunit
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
Length = 382
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 178/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+LL +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKLLQTDIPVFGICLGHQLLALASG 280
>gi|78047463|ref|YP_363638.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78035893|emb|CAJ23584.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 374
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 174/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+R+ + AGL++R + SNWR L +L R ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEARKIWAAGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L + + G+DL VS ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTEKTYLWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+ YD+G+K NILR LA GC + VVP+ P +E L L+PDGV SNGPGDP
Sbjct: 184 VPAKYKVVTYDYGVKLNILRMLAERGCDVTVVPARTPVAEVLALQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A +KEL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAIAAIKELVAKKVPTFGICLGHQLLALAAG 276
>gi|409422610|ref|ZP_11259701.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. HYS]
Length = 378
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLIASNWRNKQSLPDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R + + G+DL VS K +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKSSYEWRSSV---WELKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+AYDFG+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HATIEAAELPYHVVAYDFGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDILETEIPVFGICLGHQLLALASG 280
>gi|417370622|ref|ZP_12141440.1| Carbamoyl-phosphate synthase small chain, partial [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
gi|353610403|gb|EHC63388.1| Carbamoyl-phosphate synthase small chain, partial [Salmonella
enterica subsp. enterica serovar Inverness str. R8-3668]
Length = 380
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 178/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ ++ V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLSFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 289
>gi|168262262|ref|ZP_02684235.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205348892|gb|EDZ35523.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 382
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 178/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ ++ V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLSFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|448240472|ref|YP_007404525.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Serratia marcescens WW4]
gi|445210836|gb|AGE16506.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Serratia marcescens WW4]
gi|453064766|gb|EMF05730.1| carbamoyl phosphate synthase small subunit [Serratia marcescens
VGH107]
Length = 382
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E+L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEESLSDYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S L ++ + + G+DL +V+ +E + W + + W
Sbjct: 122 LREKGAQNGCIIAADSPDAALALAKAQGFPGLKGMDLAKEVTTQEAYSWQQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+KT + V+AYD+G K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GDLPEAKTAAELPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPADEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKQFLETDIPVFGICLGHQLLALASG 280
>gi|424921343|ref|ZP_18344704.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens R124]
gi|404302503|gb|EJZ56465.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens R124]
Length = 378
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIDASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|170727911|ref|YP_001761937.1| carbamoyl phosphate synthase small subunit [Shewanella woodyi ATCC
51908]
gi|169813258|gb|ACA87842.1| carbamoyl-phosphate synthase, small subunit [Shewanella woodyi ATCC
51908]
Length = 381
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 179/280 (63%), Gaps = 11/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFSGIAIGADGHAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R ++L +YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNDEDTESDSVHACGLIIRDLPLIASNFRNQQSLSDYLKANNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST------KPDW 180
+ G+ G + E ++ L E + G+DL +V+ ++W + PD
Sbjct: 124 EKGAQAGCILVGEQDVEKALAEAKAFPGLKGMDLAKEVTTDTQYQWRNGSWRLVGGLPD- 182
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
++ E + K Y+V+AYD+G+K NILR L GC + VVP+ PASE L + PDG+ SN
Sbjct: 183 --DSPESDLK-YKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPASEVLAMNPDGIFLSN 239
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+A ++E+L +PVFGIC+GHQLL A G
Sbjct: 240 GPGDPEPCDYAIAAIQEILKTDIPVFGICLGHQLLALASG 279
>gi|398840288|ref|ZP_10597525.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM102]
gi|398110876|gb|EJM00770.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM102]
Length = 378
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA+E L LKPDGV SNG
Sbjct: 182 HATIDASDLPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAAEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|395647259|ref|ZP_10435109.1| carbamoyl phosphate synthase small subunit [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 378
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEQYEWRSTV---WDLKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+GIK+NILR L GC++ VVP+ PAS+ L L+PDGV SNG
Sbjct: 182 HATIDAAELPYHVVAYDYGIKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETDIPVFGICLGHQLLALASG 280
>gi|262044925|ref|ZP_06017967.1| carbamoyl-phosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037652|gb|EEW38881.1| carbamoyl-phosphate synthase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 391
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/282 (48%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ES Q LE ++++ + G+DL +V+ E + W T+ W
Sbjct: 131 LREKGAQNGCIIAGESPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSW---TQGSWTLA 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+
Sbjct: 188 GDLPEAKVESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAADVLALNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 289
>gi|92115201|ref|YP_575129.1| carbamoyl-phosphate synthase small subunit [Chromohalobacter
salexigens DSM 3043]
gi|91798291|gb|ABE60430.1| carbamoyl-phosphate synthase small subunit [Chromohalobacter
salexigens DSM 3043]
Length = 381
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 181/282 (64%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILALEDGSVFHGSAIGADGQTSGEVVFNTAMTGYQEILTDPSYTRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
+N +D ES AGLVIR L + SN+R E+L YL ++GI D+DTR +TR LR
Sbjct: 65 INAEDIESAAIAAAGLVIRDLPLVASNFRSEESLDAYLKRNGVLGIADIDTRRLTRVLRD 124
Query: 127 ---QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF 182
Q+G+++ + E + + L +R++ + G+DL +VS +E +EW E +W
Sbjct: 125 KGAQNGAILAGVDAEGDAAVERALTAARAFPGLKGMDLAQEVSCRETYEWSEG---EWSL 181
Query: 183 NT----HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+AYD+G K NILR LAS GC++ VVP+ PA E L ++PDGV
Sbjct: 182 GSGYADASQGERPYHVVAYDYGAKFNILRMLASRGCRLTVVPARTPAVEVLSMQPDGVFL 241
Query: 239 SNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+NGPGDP YA+ ++E++ VP+FGIC+GHQLLG A G
Sbjct: 242 ANGPGDPEPCDYAIEAIREVIAADVPLFGICLGHQLLGLASG 283
>gi|167035716|ref|YP_001670947.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
GB-1]
gi|325276149|ref|ZP_08141956.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. TJI-51]
gi|397693420|ref|YP_006531300.1| Carbamoyl-phosphate synthase small chain [Pseudomonas putida
DOT-T1E]
gi|421523910|ref|ZP_15970537.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
LS46]
gi|166862204|gb|ABZ00612.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas putida
GB-1]
gi|324098725|gb|EGB96764.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. TJI-51]
gi|397330150|gb|AFO46509.1| Carbamoyl-phosphate synthase small chain [Pseudomonas putida
DOT-T1E]
gi|402752155|gb|EJX12662.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
LS46]
Length = 378
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIDAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 280
>gi|58427105|gb|AAW76142.1| carbamoyl-phosphate synthase small chain [Xanthomonas oryzae pv.
oryzae KACC 10331]
Length = 421
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 176/280 (62%), Gaps = 2/280 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RP A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T
Sbjct: 45 RPHVTQPAILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTY 104
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG D+E+R+ + +GL++R + SNWR L +L R ++ I +DTR
Sbjct: 105 PHIGNTGFTDQDDEARKIWASGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRK 164
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
+TR LRQ G+ G L E ++ L R + G+DL VS + + W E + D
Sbjct: 165 LTRLLRQKGAQNGALMAGEIDVEKALDAARRFPGLKGMDLAKVVSTESTYNWQEG-QLDL 223
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + R Y+V+A+D+G+K NILR LA GC + VVP+ P +E L L+PDGV SN
Sbjct: 224 NADAFVRAGLKYKVVAFDYGVKLNILRMLAERGCDVTVVPAQTPVAEVLALQPDGVFLSN 283
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+ +KEL+ KVP FGIC+GHQLL A G
Sbjct: 284 GPGDPEPCDYAIGAIKELIAQKVPTFGICLGHQLLALAAG 323
>gi|417346102|ref|ZP_12126054.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
gi|353580719|gb|EHC41877.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Gaminara str. A4-567]
Length = 391
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 178/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR LA GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLADRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPLFGICLGHQLLALASG 289
>gi|289207883|ref|YP_003459949.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio sp.
K90mix]
gi|288943514|gb|ADC71213.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio sp.
K90mix]
Length = 377
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 173/279 (62%), Gaps = 8/279 (2%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
A A LVLEDG+++ ++ GA G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN
Sbjct: 3 APALLVLEDGTVFHGQAIGAQGQTVGEVVFNTAMTGYQEILTDPSYHRQMVTLTYPHIGN 62
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
TG +D+ES + AGL+IR L SNWR E+L +YL I+ I +DTR +TR L
Sbjct: 63 TGTTPEDDESARAHAAGLIIRDLPPLVSNWRSRESLPDYLLRHGIVAISGIDTRKLTRIL 122
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
R+ G+L G + E L I G+DL +V+ + +EW+E T W
Sbjct: 123 REKGALNGCIQAGEVDEQAALAAAREFPGIKGMDLAREVTTRNRYEWLEGT---WQLGEE 179
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG+K NILR LA GC++ VVP+ P E ++LKPDGV SNG
Sbjct: 180 SARVDPEQAEFHVVAYDFGMKQNILRMLADRGCRVTVVPAETPVDEVMELKPDGVFLSNG 239
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ +++ K+P+FGIC+GHQLLG A G
Sbjct: 240 PGDPEPCTYAIDAIRDFCERKLPLFGICLGHQLLGIASG 278
>gi|159900755|ref|YP_001547002.1| carbamoyl-phosphate synthase small subunit [Herpetosiphon
aurantiacus DSM 785]
gi|159893794|gb|ABX06874.1| carbamoyl-phosphate synthase, small subunit [Herpetosiphon
aurantiacus DSM 785]
Length = 376
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 12/282 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A L LEDG + ++ GA G + GEVVFNTS+TGY EILTDPSY GQ V +T HIG
Sbjct: 1 MTRALLALEDGRTFWGRAVGARGERAGEVVFNTSMTGYAEILTDPSYRGQLVTLTASHIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G++ D E+ + L++RS + SNWR E+L LA R +M + D+DTRA+TR
Sbjct: 61 NYGIDEVDLEAAMPWAEALIVRSFTERPSNWRSRESLSELLARRGVMAVADLDTRALTRH 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF-- 182
+R G++ VLSTE+ + + + G DL SDV + +EW E T D+
Sbjct: 121 IRAAGAMRAVLSTEDLDPASLVAKAQAIPVMEGRDLASDVGTQSIYEWNEGTPADFTTLQ 180
Query: 183 -----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
H R+ V+ YDFG+K N LRRL GC++ VVP+ A TL LKPDG+L
Sbjct: 181 LAIPEQLHNRH-----VVVYDFGVKRNTLRRLVDLGCKVTVVPNRTSAEATLALKPDGIL 235
Query: 238 FSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ + YAV +++L+G VPVFGIC+GHQL+GQALG
Sbjct: 236 ISNGPGDPATLEYAVETIRQLIGNVPVFGICLGHQLIGQALG 277
>gi|110640244|ref|YP_667972.1| carbamoyl phosphate synthase small subunit [Escherichia coli 536]
gi|191174119|ref|ZP_03035633.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli F11]
gi|222154859|ref|YP_002554998.1| Carbamoyl-phosphate synthase small chain [Escherichia coli LF82]
gi|387615377|ref|YP_006118399.1| carbamoyl phosphate synthase small subunit [Escherichia coli O83:H1
str. NRG 857C]
gi|416333852|ref|ZP_11670960.1| Carbamoyl-phosphate synthase small chain [Escherichia coli
WV_060327]
gi|432469362|ref|ZP_19711418.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE206]
gi|432711717|ref|ZP_19946772.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE8]
gi|433076187|ref|ZP_20262768.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE131]
gi|110341836|gb|ABG68073.1| carbamoyl-phosphate synthase small chain [Escherichia coli 536]
gi|190905613|gb|EDV65238.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli F11]
gi|222031864|emb|CAP74602.1| Carbamoyl-phosphate synthase small chain [Escherichia coli LF82]
gi|312944638|gb|ADR25465.1| carbamoyl phosphate synthase small subunit [Escherichia coli O83:H1
str. NRG 857C]
gi|320197525|gb|EFW72139.1| Carbamoyl-phosphate synthase small chain [Escherichia coli
WV_060327]
gi|431001340|gb|ELD16923.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE206]
gi|431260711|gb|ELF52806.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE8]
gi|431603687|gb|ELI73110.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE131]
Length = 382
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|188575982|ref|YP_001912911.1| carbamoyl phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520434|gb|ACD58379.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 390
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 176/280 (62%), Gaps = 2/280 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RP A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T
Sbjct: 14 RPHVTQPAILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTY 73
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG D+E+R+ + +GL++R + SNWR L +L R ++ I +DTR
Sbjct: 74 PHIGNTGFTDQDDEARKIWASGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRK 133
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
+TR LRQ G+ G L E ++ L R + G+DL VS + + W E + D
Sbjct: 134 LTRLLRQKGAQNGALMAGEIDVEKALDAARRFPGLKGMDLAKVVSTESTYNWQEG-QLDL 192
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + R Y+V+A+D+G+K NILR LA GC + VVP+ P +E L L+PDGV SN
Sbjct: 193 NADAFVRAGLKYKVVAFDYGVKLNILRMLAERGCDVTVVPAQTPVAEVLALQPDGVFLSN 252
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+ +KEL+ KVP FGIC+GHQLL A G
Sbjct: 253 GPGDPEPCDYAIGAIKELIAQKVPTFGICLGHQLLALAAG 292
>gi|148549792|ref|YP_001269894.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida F1]
gi|395445479|ref|YP_006385732.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida ND6]
gi|148513850|gb|ABQ80710.1| carbamoyl-phosphate synthase small subunit [Pseudomonas putida F1]
gi|388559476|gb|AFK68617.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida ND6]
Length = 386
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 73 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL VS KE +EW S W+ T
Sbjct: 133 KGAQNGCILAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 189
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 190 HPTIDAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 249
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 250 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 288
>gi|300113255|ref|YP_003759830.1| carbamoyl-phosphate synthase small subunit [Nitrosococcus watsonii
C-113]
gi|299539192|gb|ADJ27509.1| carbamoyl-phosphate synthase, small subunit [Nitrosococcus watsonii
C-113]
Length = 381
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 172/276 (62%), Gaps = 4/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++R + G G VGEVVFNT++TGYQEILTDPSY Q V +T PH+GN G
Sbjct: 5 ALLALEDGSVFRGTAIGCQGQTVGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHVGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D+ES + + +GL IR S SNWR E LG +LA ++ I D+DTR +TR LRQ
Sbjct: 65 ANSEDQESDRVYASGLAIRDYSFAVSNWRAREPLGAFLARHQVVAIADIDTRRLTRHLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST--KPDWDFNT 184
G+L G + E + E L +R++ + G+DL V+ + W E + F
Sbjct: 125 HGALNGCIMAGEGIDEAEALVQARAFPGLKGMDLAQAVTTDASYGWSEGSWRLEQTAFAA 184
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + + V+ YDFG+K NILR L GC++ VVP+ A E L L PDG++ SNGPGD
Sbjct: 185 GKKIKERFHVVVYDFGVKRNILRMLVDRGCRVTVVPAKTSAKEALALSPDGIVLSNGPGD 244
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ ++E L + +P+FGIC+GHQLL A G
Sbjct: 245 PDPCGYAITAIQEFLAQPIPLFGICLGHQLLALASG 280
>gi|218556970|ref|YP_002389883.1| carbamoyl phosphate synthase small subunit [Escherichia coli S88]
gi|218687907|ref|YP_002396119.1| carbamoyl phosphate synthase small subunit [Escherichia coli ED1a]
gi|306815370|ref|ZP_07449519.1| carbamoyl phosphate synthase small subunit [Escherichia coli NC101]
gi|331661070|ref|ZP_08362002.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA206]
gi|386597781|ref|YP_006099287.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
IHE3034]
gi|386607120|ref|YP_006113420.1| carbamoyl phosphate synthase small subunit [Escherichia coli UM146]
gi|386617534|ref|YP_006137114.1| Carbamoyl-phosphate synthase small subunit [Escherichia coli NA114]
gi|386637384|ref|YP_006104182.1| carbamoyl-phosphate synthase small subunit [Escherichia coli ABU
83972]
gi|387828088|ref|YP_003348025.1| carbamoyl-phosphate synthase small subunit [Escherichia coli SE15]
gi|417082244|ref|ZP_11950666.1| carbamoyl phosphate synthase small subunit [Escherichia coli
cloneA_i1]
gi|417288108|ref|ZP_12075394.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TW07793]
gi|417660663|ref|ZP_12310244.1| carbamoyl-phosphate synthase small chain [Escherichia coli AA86]
gi|419698954|ref|ZP_14226578.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SCI-07]
gi|419942544|ref|ZP_14459143.1| carbamoyl phosphate synthase small subunit [Escherichia coli HM605]
gi|422750579|ref|ZP_16804489.1| carbamoyl-phosphate synthase [Escherichia coli H252]
gi|422756366|ref|ZP_16810189.1| carbamoyl-phosphate synthase [Escherichia coli H263]
gi|422839987|ref|ZP_16887958.1| carbamoyl-phosphate synthase small subunit [Escherichia coli H397]
gi|432356389|ref|ZP_19599637.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE4]
gi|432365888|ref|ZP_19609023.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE5]
gi|432384587|ref|ZP_19627500.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE15]
gi|432385417|ref|ZP_19628319.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE16]
gi|432410031|ref|ZP_19652719.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE39]
gi|432420143|ref|ZP_19662704.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE178]
gi|432434576|ref|ZP_19676988.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE188]
gi|432439367|ref|ZP_19681733.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE189]
gi|432444490|ref|ZP_19686802.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE191]
gi|432454805|ref|ZP_19697017.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE201]
gi|432493856|ref|ZP_19735678.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE214]
gi|432498323|ref|ZP_19740104.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE216]
gi|432510260|ref|ZP_19749120.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE220]
gi|432512227|ref|ZP_19749474.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE224]
gi|432522169|ref|ZP_19759315.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE230]
gi|432552068|ref|ZP_19788802.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE47]
gi|432557050|ref|ZP_19793746.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE49]
gi|432566901|ref|ZP_19803433.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE53]
gi|432571923|ref|ZP_19808418.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE55]
gi|432586359|ref|ZP_19822733.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE58]
gi|432591030|ref|ZP_19827364.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE60]
gi|432595929|ref|ZP_19832219.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE62]
gi|432605894|ref|ZP_19842094.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE67]
gi|432609737|ref|ZP_19845913.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE72]
gi|432644440|ref|ZP_19880247.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE86]
gi|432649397|ref|ZP_19885167.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE87]
gi|432654074|ref|ZP_19889796.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE93]
gi|432692708|ref|ZP_19927930.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE162]
gi|432697337|ref|ZP_19932513.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE169]
gi|432708864|ref|ZP_19943935.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE6]
gi|432730752|ref|ZP_19965613.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE45]
gi|432743956|ref|ZP_19978665.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE43]
gi|432757544|ref|ZP_19992080.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE22]
gi|432762302|ref|ZP_19996767.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE46]
gi|432776913|ref|ZP_20011170.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE59]
gi|432781915|ref|ZP_20016102.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE63]
gi|432790614|ref|ZP_20024735.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE65]
gi|432819381|ref|ZP_20053096.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE118]
gi|432825509|ref|ZP_20059167.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE123]
gi|432892598|ref|ZP_20104765.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE165]
gi|432902332|ref|ZP_20112080.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE194]
gi|432916942|ref|ZP_20121681.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE173]
gi|432924172|ref|ZP_20126591.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE175]
gi|432941726|ref|ZP_20139224.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE183]
gi|432970168|ref|ZP_20159050.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE207]
gi|432976733|ref|ZP_20165560.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE209]
gi|432979408|ref|ZP_20168198.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE211]
gi|432983754|ref|ZP_20172496.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE215]
gi|432993783|ref|ZP_20182405.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE218]
gi|432998200|ref|ZP_20186752.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE223]
gi|433003571|ref|ZP_20192010.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE227]
gi|433010779|ref|ZP_20199184.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE229]
gi|433012206|ref|ZP_20200595.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE104]
gi|433026401|ref|ZP_20214355.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE106]
gi|433036957|ref|ZP_20224585.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE113]
gi|433056353|ref|ZP_20243455.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE124]
gi|433080936|ref|ZP_20267416.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE133]
gi|433085677|ref|ZP_20272089.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE137]
gi|433094904|ref|ZP_20281131.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE139]
gi|433099569|ref|ZP_20285691.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE145]
gi|433104207|ref|ZP_20290233.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE148]
gi|433113962|ref|ZP_20299788.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE153]
gi|433123626|ref|ZP_20309226.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE160]
gi|433142241|ref|ZP_20327459.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE167]
gi|433142529|ref|ZP_20327715.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE168]
gi|433147444|ref|ZP_20332533.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE174]
gi|433152164|ref|ZP_20337140.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE176]
gi|433166576|ref|ZP_20351281.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE179]
gi|433171565|ref|ZP_20356167.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE180]
gi|433191353|ref|ZP_20375420.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE88]
gi|433196597|ref|ZP_20380538.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE94]
gi|433210948|ref|ZP_20394573.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE99]
gi|433326739|ref|ZP_20403490.1| carbamoyl phosphate synthase small subunit [Escherichia coli J96]
gi|442607020|ref|ZP_21021813.1| Carbamoyl-phosphate synthase small chain [Escherichia coli Nissle
1917]
gi|31563003|sp|Q8FLB1.2|CARA_ECOL6 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|218363739|emb|CAR01399.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli S88]
gi|218425471|emb|CAR06253.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli ED1a]
gi|281177245|dbj|BAI53575.1| carbamoyl-phosphate synthase small subunit [Escherichia coli SE15]
gi|294493415|gb|ADE92171.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
IHE3034]
gi|305851032|gb|EFM51487.1| carbamoyl phosphate synthase small subunit [Escherichia coli NC101]
gi|307551876|gb|ADN44651.1| carbamoyl-phosphate synthase small chain [Escherichia coli ABU
83972]
gi|307629604|gb|ADN73908.1| carbamoyl phosphate synthase small subunit [Escherichia coli UM146]
gi|323950479|gb|EGB46357.1| carbamoyl-phosphate synthase [Escherichia coli H252]
gi|323955228|gb|EGB51001.1| carbamoyl-phosphate synthase [Escherichia coli H263]
gi|330909881|gb|EGH38391.1| carbamoyl-phosphate synthase small chain [Escherichia coli AA86]
gi|331052112|gb|EGI24151.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA206]
gi|333968035|gb|AEG34840.1| Carbamoyl-phosphate synthase small subunit [Escherichia coli NA114]
gi|355353528|gb|EHG02692.1| carbamoyl phosphate synthase small subunit [Escherichia coli
cloneA_i1]
gi|371608471|gb|EHN97027.1| carbamoyl-phosphate synthase small subunit [Escherichia coli H397]
gi|380349838|gb|EIA38102.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SCI-07]
gi|386248893|gb|EII95065.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TW07793]
gi|388422831|gb|EIL82384.1| carbamoyl phosphate synthase small subunit [Escherichia coli HM605]
gi|430879980|gb|ELC03301.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE4]
gi|430880995|gb|ELC04257.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE5]
gi|430901810|gb|ELC23706.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE15]
gi|430910945|gb|ELC32243.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE16]
gi|430939523|gb|ELC59739.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE39]
gi|430948149|gb|ELC67830.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE178]
gi|430968310|gb|ELC85537.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE188]
gi|430970079|gb|ELC87165.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE189]
gi|430976965|gb|ELC93817.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE191]
gi|430986738|gb|ELD03304.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE201]
gi|431029630|gb|ELD42661.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE214]
gi|431032403|gb|ELD45113.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE220]
gi|431032768|gb|ELD45474.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE216]
gi|431045357|gb|ELD55590.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE224]
gi|431055959|gb|ELD65489.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE230]
gi|431087767|gb|ELD93688.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE47]
gi|431095073|gb|ELE00696.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE49]
gi|431103480|gb|ELE08123.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE53]
gi|431112532|gb|ELE16222.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE55]
gi|431124490|gb|ELE27130.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE58]
gi|431134212|gb|ELE36176.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE60]
gi|431134525|gb|ELE36474.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE62]
gi|431142162|gb|ELE43912.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE67]
gi|431152368|gb|ELE53319.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE72]
gi|431185444|gb|ELE85173.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE86]
gi|431194683|gb|ELE93898.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE87]
gi|431196122|gb|ELE95067.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE93]
gi|431238163|gb|ELF33102.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE162]
gi|431247526|gb|ELF41747.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE169]
gi|431253503|gb|ELF46982.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE6]
gi|431278766|gb|ELF69739.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE45]
gi|431296329|gb|ELF86041.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE43]
gi|431297904|gb|ELF87545.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE22]
gi|431302497|gb|ELF91677.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE46]
gi|431331773|gb|ELG19017.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE59]
gi|431332808|gb|ELG20029.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE63]
gi|431333626|gb|ELG20811.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE65]
gi|431371140|gb|ELG56925.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE118]
gi|431375520|gb|ELG60860.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE123]
gi|431426019|gb|ELH08064.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE165]
gi|431438461|gb|ELH19835.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE194]
gi|431448897|gb|ELH29609.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE173]
gi|431450661|gb|ELH31146.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE175]
gi|431456327|gb|ELH36671.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE183]
gi|431483691|gb|ELH63380.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE209]
gi|431487610|gb|ELH67254.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE207]
gi|431498946|gb|ELH78128.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE211]
gi|431507820|gb|ELH86102.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE215]
gi|431511766|gb|ELH89896.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE218]
gi|431516629|gb|ELH94234.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE223]
gi|431518522|gb|ELH95976.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE227]
gi|431518991|gb|ELH96443.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE229]
gi|431527828|gb|ELI04542.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE106]
gi|431536775|gb|ELI12931.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE104]
gi|431557065|gb|ELI30839.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE113]
gi|431575649|gb|ELI48380.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE124]
gi|431607188|gb|ELI76558.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE133]
gi|431611305|gb|ELI80584.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE137]
gi|431620962|gb|ELI89784.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE139]
gi|431624386|gb|ELI93006.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE145]
gi|431634925|gb|ELJ03141.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE148]
gi|431637905|gb|ELJ05955.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE153]
gi|431651201|gb|ELJ18467.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE160]
gi|431653335|gb|ELJ20446.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE167]
gi|431667909|gb|ELJ34485.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE168]
gi|431679631|gb|ELJ45542.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE176]
gi|431679940|gb|ELJ45819.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE174]
gi|431681102|gb|ELJ46909.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE179]
gi|431681598|gb|ELJ47379.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE180]
gi|431699422|gb|ELJ64427.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE88]
gi|431727162|gb|ELJ90925.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE94]
gi|431736656|gb|ELJ99980.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE99]
gi|432345291|gb|ELL39807.1| carbamoyl phosphate synthase small subunit [Escherichia coli J96]
gi|441711769|emb|CCQ07790.1| Carbamoyl-phosphate synthase small chain [Escherichia coli Nissle
1917]
Length = 382
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|302391677|ref|YP_003827497.1| carbamoyl-phosphate synthase small subunit [Acetohalobium
arabaticum DSM 5501]
gi|302203754|gb|ADL12432.1| carbamoyl-phosphate synthase small subunit [Acetohalobium
arabaticum DSM 5501]
Length = 360
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 176/274 (64%), Gaps = 18/274 (6%)
Query: 8 ARLVLEDGSIWRAKSFGA--SGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
A+LVLEDG+I+ K+FGA G + GE+VFNTS+TGYQEILTD SY G+ V MT P IGN
Sbjct: 3 AKLVLEDGTIFTGKAFGAVEEGAE-GEIVFNTSMTGYQEILTDASYKGEIVTMTYPLIGN 61
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
G+N DD ES + G +++ SNWR + L NYL E IMGI D+DTRA+T++L
Sbjct: 62 YGINEDDIESYTSHVNGFIVKEFCAQPSNWRALDKLENYLKEHGIMGISDIDTRALTKKL 121
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
R G++ G+++T E+ ++ + + + + G DL+S V+ E T+
Sbjct: 122 RIHGTMKGIITTNEADREELIGQAKEAPGLSGRDLVSKVTTDE---------------TY 166
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ YRV+ DFG K NI R L GC++IVVP+ A ++ +PDG++ SNGPGDP
Sbjct: 167 RLDGDDYRVVLMDFGAKKNIGRSLREEGCEVIVVPADTSAEGVMEYEPDGIMLSNGPGDP 226
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
VPYAV VKEL+GK P+FGIC+GHQ+LG A G
Sbjct: 227 QDVPYAVETVKELIGKKPIFGICLGHQILGLAFG 260
>gi|423118588|ref|ZP_17106272.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5246]
gi|376400654|gb|EHT13265.1| carbamoyl-phosphate synthase small chain [Klebsiella oxytoca
10-5246]
Length = 382
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/282 (47%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ Q LE ++++ + G+DL +V+ E + W T+ W
Sbjct: 122 LREKGAQNGCIIVGDNLDAQLALEKAKAFPGLNGMDLAKEVTTSETYSW---TQGSWTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIAAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|416422884|ref|ZP_11690462.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|416429523|ref|ZP_11694585.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|416439597|ref|ZP_11700316.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|416446854|ref|ZP_11705366.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|416455044|ref|ZP_11710669.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|416458126|ref|ZP_11712728.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|416469063|ref|ZP_11718276.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|416473998|ref|ZP_11719879.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|416494033|ref|ZP_11728062.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|416495645|ref|ZP_11728695.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|416547265|ref|ZP_11754437.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|416577939|ref|ZP_11770159.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|416588029|ref|ZP_11776565.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|416592528|ref|ZP_11779338.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|416600397|ref|ZP_11784344.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|416608978|ref|ZP_11789710.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|416612787|ref|ZP_11791724.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|416620036|ref|ZP_11795417.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|416627971|ref|ZP_11799291.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|416644830|ref|ZP_11807044.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|416652411|ref|ZP_11811732.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|416657660|ref|ZP_11813876.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|416667762|ref|ZP_11818491.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|416683838|ref|ZP_11824631.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|416694619|ref|ZP_11827215.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|416708220|ref|ZP_11833082.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|416710359|ref|ZP_11834464.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|416717499|ref|ZP_11839751.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|416726483|ref|ZP_11846544.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|416729330|ref|ZP_11847934.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|416739350|ref|ZP_11853753.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|416748131|ref|ZP_11858533.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|416756915|ref|ZP_11862806.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|416763546|ref|ZP_11867220.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|416767670|ref|ZP_11870046.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|418484665|ref|ZP_13053657.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|418487003|ref|ZP_13055849.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|418494977|ref|ZP_13061422.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|418501298|ref|ZP_13067687.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|418504018|ref|ZP_13070377.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|418508676|ref|ZP_13074979.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|418524114|ref|ZP_13090101.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
gi|322615888|gb|EFY12805.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315996572]
gi|322620673|gb|EFY17533.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-1]
gi|322623976|gb|EFY20813.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-3]
gi|322627424|gb|EFY24215.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 495297-4]
gi|322630731|gb|EFY27495.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-1]
gi|322638049|gb|EFY34750.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 515920-2]
gi|322640533|gb|EFY37184.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 531954]
gi|322647673|gb|EFY44158.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322648380|gb|EFY44835.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. OH_2009072675]
gi|322656943|gb|EFY53229.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322657346|gb|EFY53618.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 19N]
gi|322663666|gb|EFY59866.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 81038-01]
gi|322666499|gb|EFY62677.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MD_MDA09249507]
gi|322672342|gb|EFY68454.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 414877]
gi|322676346|gb|EFY72417.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 366867]
gi|322679561|gb|EFY75606.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 413180]
gi|322686110|gb|EFY82094.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 446600]
gi|323194954|gb|EFZ80140.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609458-1]
gi|323200137|gb|EFZ85224.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556150-1]
gi|323201042|gb|EFZ86111.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 609460]
gi|323212309|gb|EFZ97133.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 556152]
gi|323216614|gb|EGA01340.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB101509-0077]
gi|323219342|gb|EGA03828.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB102109-0047]
gi|323225758|gb|EGA09978.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB110209-0055]
gi|323228701|gb|EGA12830.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. MB111609-0052]
gi|323236685|gb|EGA20761.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009083312]
gi|323239814|gb|EGA23861.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 2009085258]
gi|323242138|gb|EGA26167.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 315731156]
gi|323249437|gb|EGA33353.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323252228|gb|EGA36079.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323256681|gb|EGA40411.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323261285|gb|EGA44872.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008284]
gi|323265535|gb|EGA49031.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323271677|gb|EGA55095.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|366057922|gb|EHN22219.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 80959-06]
gi|366060018|gb|EHN24283.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035318]
gi|366066812|gb|EHN30970.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035320]
gi|366071447|gb|EHN35546.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035278]
gi|366072346|gb|EHN36438.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035321]
gi|366079931|gb|EHN43913.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. CT_02035327]
gi|366827015|gb|EHN53925.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 507440-20]
gi|372207776|gb|EHP21273.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008286]
Length = 382
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 178/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR LA GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLADRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPLFGICLGHQLLALASG 280
>gi|317493342|ref|ZP_07951764.1| carbamoyl-phosphate synthase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918735|gb|EFV40072.1| carbamoyl-phosphate synthase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 404
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 181/286 (63%), Gaps = 14/286 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSAILVLEDGTQFHGRSIGADGSAVGEVVFNTSMTGYQEILTDPSYSRQLVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GL+IR L + SN+R E+L +YL N++ I D+DTR +TR
Sbjct: 71 NVGTNASDEESSAVHAQGLIIRDLPLIASNYRSTESLSDYLKRHNVVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVL---STEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPD 179
LR+ G+ G + S + S D +L LE +R++ + G+DL +V+ +E + W + +
Sbjct: 131 LREKGAQNGCIITGSVDGSLPDVQLALEKARAFPGLKGMDLAKEVTTRESYAWTQGS--- 187
Query: 180 WDF-----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
W E + + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PD
Sbjct: 188 WTLMGDLPAAKEASELPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPD 247
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
G+ SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 248 GIFLSNGPGDPEPCDYAIRAIKTFLDTDIPVFGICLGHQLLALASG 293
>gi|432395871|ref|ZP_19638664.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE25]
gi|432404911|ref|ZP_19647635.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE28]
gi|432721625|ref|ZP_19956554.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE17]
gi|432726035|ref|ZP_19960924.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE18]
gi|432739803|ref|ZP_19974526.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE23]
gi|432988969|ref|ZP_20177642.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE217]
gi|433109204|ref|ZP_20295088.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE150]
gi|430918893|gb|ELC39844.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE25]
gi|430933136|gb|ELC53547.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE28]
gi|431268838|gb|ELF60199.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE17]
gi|431277283|gb|ELF68297.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE18]
gi|431287175|gb|ELF77993.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE23]
gi|431499869|gb|ELH78886.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE217]
gi|431633366|gb|ELJ01646.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE150]
Length = 382
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|227114251|ref|ZP_03827907.1| carbamoyl phosphate synthase small subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 382
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +DEES GLVIR L + SN+R E+L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAAVALEKAKAFPGLKGMDLAKEVTTAESYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDG+
Sbjct: 179 GELPAAKNESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIRAIKTFLETDIPVFGICLGHQLLALASG 280
>gi|152983723|ref|YP_001350800.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PA7]
gi|150958881|gb|ABR80906.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
PA7]
Length = 378
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSQQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
GS G + +++ LE++R++ + G+DL +VS E +EW S W+ ++
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVSTTERYEWRSSV---WNLENDS 181
Query: 185 HER---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|89072559|ref|ZP_01159131.1| carbamoyl-phosphate synthase small subunit [Photobacterium sp.
SKA34]
gi|89051663|gb|EAR57116.1| carbamoyl-phosphate synthase small subunit [Photobacterium sp.
SKA34]
Length = 379
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 EKGAQNGCIVAGNNIDEGFALEQAKAFPGLKGMDLAKEVTTSETYSWKQGS---WTLENG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
E Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAQEDKELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKTFLDKNIPIFGICLGHQILALASG 280
>gi|413958466|ref|ZP_11397705.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. SJ98]
gi|413941046|gb|EKS73006.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. SJ98]
Length = 380
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/279 (45%), Positives = 188/279 (67%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R +S GA G+ +GEVVFNT++TGYQEIL DPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGQSIGAPGSTIGEVVFNTAITGYQEILADPSYARQIVTLTYPHIGNYG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R +TL +YL + ++ I +DTR +TR LR+
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRSEQTLSDYLKAQGVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ LE++RS+ + G+DL VS +P+EW T+ +W
Sbjct: 128 KGAQNGCILAGSDDEAKA----LELARSFPGLAGMDLAKVVSTDQPYEW---TQTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ ++ + +RV+A+D+G+K+NILR LA GC + V+P+ A++ L L PDG+ SNG
Sbjct: 181 SGYGKQEAPKFRVVAFDYGVKYNILRMLAERGCHVTVLPAKSTAADALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A +E + + +P FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATREFIERGIPTFGICLGHQIMGLAVG 279
>gi|26991407|ref|NP_746832.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
KT2440]
gi|31562993|sp|Q88DU5.1|CARA_PSEPK RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|24986477|gb|AAN70296.1|AE016670_6 carbamoyl-phosphate synthase, small subunit [Pseudomonas putida
KT2440]
Length = 378
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESSRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIDAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 280
>gi|398864706|ref|ZP_10620237.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM78]
gi|398244657|gb|EJN30200.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM78]
Length = 378
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS E +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTTEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA+E L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAAEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|229592649|ref|YP_002874768.1| carbamoyl phosphate synthase small subunit [Pseudomonas fluorescens
SBW25]
gi|229364515|emb|CAY52370.1| carbamoyl-phosphate synthase small chain [Pseudomonas fluorescens
SBW25]
Length = 378
Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMVGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTV---WDLKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K+NILR L GC++ VVP+ PAS+ L L+PDGV SNG
Sbjct: 182 HATIDAAELPYLVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|433480560|ref|ZP_20437841.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
63041]
gi|433514161|ref|ZP_20470944.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
63049]
gi|433520583|ref|ZP_20477294.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
65014]
gi|433541765|ref|ZP_20498207.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
63006]
gi|432213837|gb|ELK69747.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
63041]
gi|432245649|gb|ELL01114.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
63049]
gi|432251920|gb|ELL07281.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
65014]
gi|432275717|gb|ELL30785.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
63006]
Length = 377
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVHNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|388600447|ref|ZP_10158843.1| carbamoyl phosphate synthase small subunit [Vibrio campbellii
DS40M4]
Length = 379
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 176/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + S + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNSLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K LL K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVLLEKGLPIFGICLGHQILALASG 280
>gi|404400432|ref|ZP_10992016.1| carbamoyl phosphate synthase small subunit [Pseudomonas
fuscovaginae UPB0736]
Length = 378
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + ++ +++ + +R + + G+DL VS ++ +EW + WD T
Sbjct: 125 KGSQNGCILAGDNITEEAAIAAARGFPGLKGMDLAKVVSTEKSYEWRSTV---WDLKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+GIK NILR L GC++ V+P+ PASE L LKPDGV SNG
Sbjct: 182 HATIDAADLPYHVVAYDYGIKSNILRMLVERGCRVTVLPAQAPASEALALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREILETEIPVFGICLGHQLLALASG 280
>gi|170732611|ref|YP_001764558.1| carbamoyl phosphate synthase small subunit [Burkholderia
cenocepacia MC0-3]
gi|169815853|gb|ACA90436.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
cenocepacia MC0-3]
Length = 380
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 181/275 (65%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + T S + + +E++RS++ + G+DL VS +PFEW ++ + + +
Sbjct: 127 KGAQSGCILT-GSDDEAKAIELARSFEGLAGMDLAKVVSTTKPFEWKQTEWRLEGGYGMQ 185
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + YRV+AYDFG+K+NILR LA GC + V+P+ A + L L PDG+ SNGPGDP
Sbjct: 186 E--APKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAEDALALNPDGIFLSNGPGDP 243
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A K + + VP FGIC+GHQ++G A+G
Sbjct: 244 EPCDYAIAATKAFIERGVPTFGICLGHQIMGLAVG 278
>gi|126696245|ref|YP_001091131.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9301]
gi|126543288|gb|ABO17530.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. MIT 9301]
Length = 379
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 187/276 (67%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G ++ FGASGT GE+VFNT +TGYQE++TDPSY GQ + T P IGNT
Sbjct: 8 NAKLVLSNGIVFPGFYFGASGTAFGEIVFNTGMTGYQEVITDPSYYGQILTFTYPEIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+NF+D ES + G+++R+ S SNWR + +L E+NI+G++ +DTRA+ + LR
Sbjct: 68 GINFEDSESNTN-VKGIIVRNFSSNNSNWRSKKDFNQWLVEKNIVGLHGIDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
+GS+ GV+++E+ + L + + ++ G++L VS K+ + W T+ ++D +
Sbjct: 127 SNGSMNGVITSEDKTLESCLKIIHDTPNMEGLNLSKVVSTKQKYLWTTHTQTNFDLRIRN 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+SK +++A DFGIK++IL RL S+GC+++V+PS + L KPDG+ FSNGPGDP
Sbjct: 187 AESSKKLKIVAIDFGIKNSILNRLVSHGCEVLVLPSRSSLKDVLSNKPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S+V + + K L+ G +P+FGIC+GHQ+ G ALG
Sbjct: 247 SSVSEGIDLAKSLIEYGDIPMFGICLGHQIFGLALG 282
>gi|410635105|ref|ZP_11345723.1| carbamoyl-phosphate synthase small subunit [Glaciecola lipolytica
E3]
gi|410145292|dbj|GAC12928.1| carbamoyl-phosphate synthase small subunit [Glaciecola lipolytica
E3]
Length = 387
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 180/281 (64%), Gaps = 11/281 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ S GASG VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTSIGASGISVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + + GL+IR L + SN+R +L +YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNDEDVESTKIWAKGLIIRDLPLLASNFRNQSSLSDYLKHNNILGIADIDTRRLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF 182
Q G ++ V +SK D+ L + G+DL V+ ++ + W + W
Sbjct: 124 DKGAQRGCIVTVQEDSQSKIDEALNAAKAFPGLKGMDLAKVVTTEKAYPWQDGV---WSL 180
Query: 183 NT-HERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ +E++ + Y V+AYDFG KHNILR L C++ VVP+T A + L ++PDG+ S
Sbjct: 181 ESGYEKDKQNCKYHVVAYDFGAKHNILRMLVDRNCRLTVVPATTSAKDVLAMEPDGIFLS 240
Query: 240 NGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
NGPGDP YA++ +K L +P+FGIC+GHQLL A G
Sbjct: 241 NGPGDPEPCDYAISAIKTFLDTDIPIFGICLGHQLLALASG 281
>gi|406039655|ref|ZP_11047010.1| carbamoyl phosphate synthase small subunit [Acinetobacter ursingii
DSM 16037 = CIP 107286]
Length = 379
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG+YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDNESGRIHKVWANGLIIRDLPLLHSNFRAEQSLGDYLEQNNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E L +R++ + G+DL + + FEW E + W+
Sbjct: 125 LRDKGAQNGCILAGENITEEEALAKARAFGGLNGLDLAKECCDPDGFEWTEGS---WELG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 TGFSQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|148244937|ref|YP_001219631.1| carbamoyl-phosphate synthase small subunit [Candidatus
Vesicomyosocius okutanii HA]
gi|146326764|dbj|BAF61907.1| carbamoyl-phosphate synthase small subunit [Candidatus
Vesicomyosocius okutanii HA]
Length = 373
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 180/274 (65%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I+ KS G +G +GEVVFNTS+TGYQEILTDPSY Q V++T PHIGNTG
Sbjct: 5 ALLALEDGKIFYGKSIGVNGITLGEVVFNTSMTGYQEILTDPSYVQQIVILTCPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N DEES + ++GL+IR LS+ SNWR +LG YL NI+ I D+DTRA+TR LR+
Sbjct: 65 INLVDEESDKIHVSGLIIRDLSLIASNWRSDISLGAYLKHNNIVAISDIDTRALTRHLRK 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GSL G + T + + ++ + + IDL VS + +E+ + + + +E
Sbjct: 125 QGSLKGCIITGNDIDPEVAIAKAKLFVGMKNIDLAKVVSTTQSYEFNQGSYSLVNTKFNE 184
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
N+K ++V+ YDFG+K NIL+ L GC + VV + A++ L+ PDGV SNGPGDP
Sbjct: 185 LNTK-FKVVVYDFGVKKNILKMLVDKGCALTVVNAQTSATKVLERNPDGVFLSNGPGDPE 243
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ ++ LLGK +P+FGIC+GHQLL A+G
Sbjct: 244 PCDYAIKNIQILLGKDIPLFGICLGHQLLSLAVG 277
>gi|15599952|ref|NP_253446.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PAO1]
gi|218893853|ref|YP_002442722.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
LESB58]
gi|254238507|ref|ZP_04931830.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
C3719]
gi|254244341|ref|ZP_04937663.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
2192]
gi|296391585|ref|ZP_06881060.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PAb1]
gi|313109739|ref|ZP_07795679.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
39016]
gi|355642739|ref|ZP_09052873.1| carbamoyl-phosphate synthase small subunit [Pseudomonas sp. 2_1_26]
gi|386060926|ref|YP_005977448.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
M18]
gi|386063744|ref|YP_005979048.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|392986430|ref|YP_006485017.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
DK2]
gi|416856857|ref|ZP_11912375.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
138244]
gi|416873720|ref|ZP_11917695.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
152504]
gi|418586244|ref|ZP_13150288.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
MPAO1/P1]
gi|418592938|ref|ZP_13156798.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
MPAO1/P2]
gi|419751532|ref|ZP_14277943.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PADK2_CF510]
gi|421156278|ref|ZP_15615727.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|421170545|ref|ZP_15628488.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|421182832|ref|ZP_15640302.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
E2]
gi|421519319|ref|ZP_15965990.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PAO579]
gi|424944455|ref|ZP_18360218.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
NCMG1179]
gi|584876|sp|P38098.1|CARA_PSEAE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|9951021|gb|AAG08144.1|AE004889_7 carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
PAO1]
gi|451651|gb|AAA19046.1| carbamoyl phosphate synthetase light subunit [Pseudomonas
aeruginosa PAO1]
gi|1750385|gb|AAB39250.1| carbamoylphosphate synthetase small subunit [Pseudomonas aeruginosa
PAO1]
gi|126170438|gb|EAZ55949.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
C3719]
gi|126197719|gb|EAZ61782.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
2192]
gi|218774081|emb|CAW29897.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
LESB58]
gi|310882181|gb|EFQ40775.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
39016]
gi|334841278|gb|EGM19911.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
138244]
gi|334844410|gb|EGM22985.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
152504]
gi|346060901|dbj|GAA20784.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
NCMG1179]
gi|347307232|gb|AEO77346.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
M18]
gi|348032303|dbj|BAK87663.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|354830177|gb|EHF14232.1| carbamoyl-phosphate synthase small subunit [Pseudomonas sp. 2_1_26]
gi|375043384|gb|EHS36010.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
MPAO1/P1]
gi|375048287|gb|EHS40814.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
MPAO1/P2]
gi|384401994|gb|EIE48346.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PADK2_CF510]
gi|392321935|gb|AFM67315.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
DK2]
gi|404345238|gb|EJZ71590.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PAO579]
gi|404519153|gb|EKA29927.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|404523058|gb|EKA33506.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|404541274|gb|EKA50639.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
E2]
gi|453043947|gb|EME91674.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 378
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + +++ LE++R++ + G+DL +V+ E +EW S W+ +
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSV---WNLESDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|26245955|ref|NP_751994.1| carbamoyl phosphate synthase small subunit [Escherichia coli
CFT073]
gi|91209091|ref|YP_539077.1| carbamoyl phosphate synthase small subunit [Escherichia coli UTI89]
gi|117622322|ref|YP_851235.1| carbamoyl phosphate synthase small subunit [Escherichia coli APEC
O1]
gi|227885070|ref|ZP_04002875.1| carbamoyl phosphate synthase small subunit [Escherichia coli 83972]
gi|237704174|ref|ZP_04534655.1| carbamoyl-phosphate synthase subunit small [Escherichia sp.
3_2_53FAA]
gi|300981004|ref|ZP_07175281.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
45-1]
gi|301048414|ref|ZP_07195441.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
185-1]
gi|331645138|ref|ZP_08346249.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli M605]
gi|386627535|ref|YP_006147255.1| carbamoyl phosphate synthase small subunit [Escherichia coli str.
'clone D i2']
gi|386632455|ref|YP_006152174.1| carbamoyl phosphate synthase small subunit [Escherichia coli str.
'clone D i14']
gi|422361161|ref|ZP_16441789.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
110-3]
gi|422363887|ref|ZP_16444418.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
153-1]
gi|422369841|ref|ZP_16450237.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
16-3]
gi|422380367|ref|ZP_16460545.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
57-2]
gi|432896702|ref|ZP_20107796.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE192]
gi|433027048|ref|ZP_20214929.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE109]
gi|26106352|gb|AAN78538.1|AE016755_38 Carbamoyl-phosphate synthase small chain [Escherichia coli CFT073]
gi|91070665|gb|ABE05546.1| carbamoyl-phosphate synthase small chain [Escherichia coli UTI89]
gi|115511446|gb|ABI99520.1| carbamoyl-phosphate synthase small chain [Escherichia coli APEC O1]
gi|226902086|gb|EEH88345.1| carbamoyl-phosphate synthase subunit small [Escherichia sp.
3_2_53FAA]
gi|227837899|gb|EEJ48365.1| carbamoyl phosphate synthase small subunit [Escherichia coli 83972]
gi|300299707|gb|EFJ56092.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
185-1]
gi|300409040|gb|EFJ92578.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
45-1]
gi|315285005|gb|EFU44450.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
110-3]
gi|315293395|gb|EFU52747.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
153-1]
gi|315298451|gb|EFU57706.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
16-3]
gi|324008376|gb|EGB77595.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
57-2]
gi|331045895|gb|EGI18014.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli M605]
gi|355418434|gb|AER82631.1| carbamoyl phosphate synthase small subunit [Escherichia coli str.
'clone D i2']
gi|355423354|gb|AER87550.1| carbamoyl phosphate synthase small subunit [Escherichia coli str.
'clone D i14']
gi|431430846|gb|ELH12625.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE192]
gi|431547230|gb|ELI21611.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE109]
Length = 391
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|385329098|ref|YP_005883401.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
alpha710]
gi|308389950|gb|ADO32270.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
alpha710]
Length = 399
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|387895668|ref|YP_006325965.1| carbamoyl-phosphate synthase small subunit [Pseudomonas fluorescens
A506]
gi|423693617|ref|ZP_17668137.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens SS101]
gi|387159845|gb|AFJ55044.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens A506]
gi|388001950|gb|EIK63279.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens SS101]
Length = 378
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMVGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+AYD+G+K+NILR L GC++ VVP+ PAS+ L ++PDGV SNG
Sbjct: 182 HATIEAADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLAMQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|304388384|ref|ZP_07370494.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
ATCC 13091]
gi|416179631|ref|ZP_11611067.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M6190]
gi|416189061|ref|ZP_11615077.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M0579]
gi|304337616|gb|EFM03775.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
ATCC 13091]
gi|325131493|gb|EGC54200.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M6190]
gi|325135631|gb|EGC58248.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M0579]
Length = 399
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|254245765|ref|ZP_04939086.1| Carbamoylphosphate synthase small subunit [Burkholderia cenocepacia
PC184]
gi|124870541|gb|EAY62257.1| Carbamoylphosphate synthase small subunit [Burkholderia cenocepacia
PC184]
Length = 388
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 181/275 (65%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 15 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 74
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 75 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 134
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + T S + + +E++RS++ + G+DL VS +PFEW ++ + + +
Sbjct: 135 KGAQSGCILT-GSDDEAKAIELARSFEGLAGMDLAKVVSTTKPFEWKQTEWRLEGGYGMQ 193
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + YRV+AYDFG+K+NILR LA GC + V+P+ A + L L PDG+ SNGPGDP
Sbjct: 194 E--APKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAEDALALNPDGIFLSNGPGDP 251
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A K + + VP FGIC+GHQ++G A+G
Sbjct: 252 EPCDYAIAATKAFIERGVPTFGICLGHQIMGLAVG 286
>gi|300984135|ref|ZP_07176886.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
200-1]
gi|422376362|ref|ZP_16456613.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
60-1]
gi|300306760|gb|EFJ61280.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
200-1]
gi|324012353|gb|EGB81572.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
60-1]
Length = 391
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|410641571|ref|ZP_11352091.1| carbamoyl-phosphate synthase small subunit [Glaciecola chathamensis
S18K6]
gi|410139104|dbj|GAC10278.1| carbamoyl-phosphate synthase small subunit [Glaciecola chathamensis
S18K6]
Length = 381
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 185/283 (65%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGATGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + + GL+IR L + SN+R ++L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDCESTKVWAKGLIIRDLPLLASNFRNEQSLSEYLRANNILGIADIDTRRLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G +I V ++ E D ++ LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 DKGAQNGCIIAVDASSEQSLDSDVGLEKAKAFPGLKGLDLAKEVTTDELYSWTDGS---W 180
Query: 181 DFNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
++T + V+AYD+G KHNILR L GC++ VVP+ A++ L L PDGV
Sbjct: 181 TLGQGFNENQTDLLFHVVAYDYGAKHNILRMLVDRGCRLTVVPAKTSAADVLALNPDGVF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 241 LSNGPGDPEPCDYAIDAIKTLLDKDLPIFGICLGHQLLALASG 283
>gi|440739563|ref|ZP_20919074.1| carbamoyl phosphate synthase small subunit [Pseudomonas fluorescens
BRIP34879]
gi|447918368|ref|YP_007398936.1| carbamoyl phosphate synthase small subunit [Pseudomonas poae
RE*1-1-14]
gi|440379395|gb|ELQ15991.1| carbamoyl phosphate synthase small subunit [Pseudomonas fluorescens
BRIP34879]
gi|445202231|gb|AGE27440.1| carbamoyl phosphate synthase small subunit [Pseudomonas poae
RE*1-1-14]
Length = 378
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMVGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTV---WDLKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K+NILR L GC++ VVP+ PAS+ L L+PDGV SNG
Sbjct: 182 HATIDAAELPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|257095279|ref|YP_003168920.1| carbamoyl-phosphate synthase small subunit [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047803|gb|ACV36991.1| carbamoyl-phosphate synthase, small subunit [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 382
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 169/272 (62%), Gaps = 5/272 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R ++ GA+G+ GEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 10 AILALADGTIFRGQAIGAAGSTSGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNVG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N DD ESR AGLVIR L I +WR ETLG YL + I+ I +DTR +TR LR+
Sbjct: 70 CNADDFESRGNHAAGLVIRDLPIRAESWRLQETLGGYLQKHGIVAIAGIDTRKLTRILRE 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E + + E + G+DL VS P+EW + W +
Sbjct: 130 KGAQAGCLMAGEVDETRAVAEARAFPGLAGMDLAKVVSTATPYEW---SAGKWSLTGYRP 186
Query: 188 -NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ V+AYDFG+KHNILR LA+ GC++ VVP+ A+E L +PDGV SNGPGDP
Sbjct: 187 VPVAQWHVVAYDFGVKHNILRMLAARGCRLTVVPAQTSAAEVLDRRPDGVFLSNGPGDPE 246
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQA 277
YA+ ++ELL +P FGIC+GHQLL A
Sbjct: 247 PCDYAITAIRELLAAGLPTFGICLGHQLLALA 278
>gi|240013366|ref|ZP_04720279.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
DGI18]
gi|240015809|ref|ZP_04722349.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
FA6140]
gi|240120439|ref|ZP_04733401.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
PID24-1]
Length = 399
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 183/285 (64%), Gaps = 13/285 (4%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TMLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 D----FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ F T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGV 255
Query: 237 LFSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 256 FLSNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|167855247|ref|ZP_02478016.1| carbamoyl-phosphate synthase small subunit [Haemophilus parasuis
29755]
gi|167853611|gb|EDS24856.1| carbamoyl-phosphate synthase small subunit [Haemophilus parasuis
29755]
Length = 374
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 178/276 (64%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ KS G G +GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLADGSVFHGKSIGYQGHTIGEVVFNTAMTGYQEILTDPSYTNQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE+ + + A L+IR L + SN+R +L +YL + I+ I D+DTR +TR LR
Sbjct: 65 TNSEDEEADKVYAASLIIRDLPLIHSNFRANSSLSDYLVKHKIVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + + + + LE++ S+ + G DL +V+ KE ++W E +W
Sbjct: 125 KGAQAGCIYVGDDVA--KALELANSFGSMAGQDLAKEVTCKELYQWKEG---EWQLGKGY 179
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + + V+AYDFG+K NILR LA GC+I VVP+T A L L PDGV SNGPGD
Sbjct: 180 VQQTTPEFHVVAYDFGVKRNILRMLAERGCRITVVPATTSAEAVLALNPDGVFLSNGPGD 239
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+ +++LL K P+FGIC+GHQLLG A G
Sbjct: 240 PEPCTYAITAIQKLLATKKPIFGICLGHQLLGLAAG 275
>gi|170719894|ref|YP_001747582.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
W619]
gi|169757897|gb|ACA71213.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas putida
W619]
Length = 386
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 182/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L +YL N++ I +DTR +TR LR+
Sbjct: 73 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPDYLKANNVVAIAGIDTRRLTRILRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R++ + G+DL VS KE +EW S W+ T
Sbjct: 133 KGAQNGCILAGDNISEEAAIAAARAFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 189
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 190 HPTLEASELPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 249
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L +PVFGIC+GHQLL A G
Sbjct: 250 PGDPEPCDYAIQAIKEILDTDIPVFGICLGHQLLALASG 288
>gi|417536413|ref|ZP_12189572.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
gi|353670390|gb|EHD07015.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Wandsworth str. A4-580]
Length = 391
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 289
>gi|402701785|ref|ZP_10849764.1| carbamoyl phosphate synthase small subunit [Pseudomonas fragi A22]
Length = 378
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 180/280 (64%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PH+GNT
Sbjct: 4 QAILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHVGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G +D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR
Sbjct: 64 GTTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ SD+ + +R + + G+DL VS ++ +EW S W+ T
Sbjct: 124 EKGAQNGCIMAGDNISDEAAIAAARGFPGLKGMDLAKVVSTEKAYEWRSSV---WNLATD 180
Query: 186 -----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
E + Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L L PDGV SN
Sbjct: 181 SHPTIEASELPYHVVAYDYGVKWNILRMLVERGCRVTVVPAQTPASDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 241 GPGDPEPCDYAITAIQEVLKTEIPVFGICLGHQLLALASG 280
>gi|337286430|ref|YP_004625903.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfatator
indicus DSM 15286]
gi|335359258|gb|AEH44939.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfatator
indicus DSM 15286]
Length = 374
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/274 (47%), Positives = 178/274 (64%), Gaps = 5/274 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A +VLEDG+ + KSF G GE+VFNT++TGYQEILTDPSY GQ V MT P IGN
Sbjct: 2 KALIVLEDGTTFWGKSFTGPGEVFGEIVFNTAMTGYQEILTDPSYRGQIVTMTYPLIGNY 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES + + V+R SNWR +LG++L + ++GI VDTRAITR +R
Sbjct: 62 GINDEDNESLRIQVEAFVVREYQPFYSNWRAKRSLGDWLKSQGVLGIEQVDTRAITRHIR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVE-STKPDWDFNTH 185
G++ +STE+ L ++ + +VG DL+ +V+ K+P+ WV K + FN
Sbjct: 122 LSGAMKAGISTEDLNPASLLEKVKAAPGLVGRDLVKEVTCKKPYRWVNGEIKEFFPFNP- 180
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ +RV+ D G+K N LR + G Q++VVP+T A E L +PDGV FSNGPGDP
Sbjct: 181 ---NGGFRVVVIDCGLKFNQLRLMEERGLQLLVVPATTSAEEILSYEPDGVFFSNGPGDP 237
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+AVPY V K+LLGK P+FGIC+GHQ++GQALG
Sbjct: 238 AAVPYVVDTAKKLLGKKPIFGICLGHQMIGQALG 271
>gi|408479051|ref|ZP_11185270.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. R81]
Length = 378
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMVGDNISEEAAIAAAQGFPGLKGMDLAKVVSVKEKYEWRSTV---WDLKTDS 181
Query: 187 RNS-----KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K+NILR L GC++ VVP+ PAS+ L L+PDGV SNG
Sbjct: 182 HATIDAADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLALQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|194097654|ref|YP_002000692.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
NCCP11945]
gi|193932944|gb|ACF28768.1| carbamoyl-phosphate synthase small subunit [Neisseria gonorrhoeae
NCCP11945]
Length = 399
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 182/279 (65%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 27 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 86
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 87 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 146
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+ F
Sbjct: 147 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 203
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGP
Sbjct: 204 VTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGP 261
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 262 GDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|365833864|ref|ZP_09375316.1| carbamoyl-phosphate synthase, small subunit [Hafnia alvei ATCC
51873]
gi|364570912|gb|EHM48513.1| carbamoyl-phosphate synthase, small subunit [Hafnia alvei ATCC
51873]
Length = 404
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 181/286 (63%), Gaps = 14/286 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSAILVLEDGTQFHGRSIGADGSAVGEVVFNTSMTGYQEILTDPSYSRQLVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GL+IR L + SN+R E+L +YL N++ I D+DTR +TR
Sbjct: 71 NVGTNASDEESSAVHAQGLIIRDLPLIASNYRSTESLSDYLKRHNVVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLST---EESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPD 179
LR+ G+ G + T + + D +L LE +R++ + G+DL +V+ +E + W + +
Sbjct: 131 LREKGAQNGCIITGLADGTLPDAQLALEKARAFPGLKGMDLAKEVTTRESYAWTQGS--- 187
Query: 180 WDF-----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
W E + + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PD
Sbjct: 188 WTLMGDLPAAKEASELPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPD 247
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
G+ SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 248 GIFLSNGPGDPEPCDYAIRAIKTFLDTDIPVFGICLGHQLLALASG 293
>gi|87302225|ref|ZP_01085050.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp. WH
5701]
gi|87283150|gb|EAQ75106.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp. WH
5701]
Length = 404
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 185/275 (67%), Gaps = 4/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG++ R +FGA GT +GEVVFNT +TGYQE++TDPSY+GQ V T P +GNTG
Sbjct: 33 AVLVLADGTLLRGTAFGARGTAIGEVVFNTGMTGYQEVMTDPSYSGQLVTFTYPELGNTG 92
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D+E+ + G++ R L+ S+WR L ++LA ++GI VDTRA+ R LR+
Sbjct: 93 VNPEDQEAEAPHVRGVIARQLAPAPSSWRSRGDLPSWLASHGVVGIAGVDTRALVRHLRE 152
Query: 128 DGSLIGVLSTEESKSDQELLEM-SRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ GV+S+ + + +ELLE+ RS + G++L + V+ + W + +D
Sbjct: 153 RGAMNGVISS-DGTAPRELLELVRRSPSMEGLNLAARVTAPSAYLWQQLCATGFDQRLQP 211
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ YRV+A DFGIK IL RL ++GC + V+P++ +E L L+P+GV SNGPGDP+
Sbjct: 212 SPERPYRVVAIDFGIKRAILERLTAHGCTVTVLPASSTIAEVLALEPEGVFLSNGPGDPA 271
Query: 247 AVPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
AV +A+ ++LLG+ +PVFGIC+GHQ+LG ALG
Sbjct: 272 AVAEGIALARDLLGQADLPVFGICLGHQILGLALG 306
>gi|410646483|ref|ZP_11356934.1| carbamoyl-phosphate synthase small subunit [Glaciecola agarilytica
NO2]
gi|410134089|dbj|GAC05333.1| carbamoyl-phosphate synthase small subunit [Glaciecola agarilytica
NO2]
Length = 381
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 135/283 (47%), Positives = 185/283 (65%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGATGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + + GL+IR L + SN+R ++L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDCESTKVWAKGLIIRDLPLLASNFRNEQSLSEYLRANNILGIADIDTRRLTRILR 123
Query: 127 ----QDGSLIGVLSTEESKSDQEL-LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G +I V ++ E D ++ LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 DKGAQNGCIIAVDASSEQSLDSDVGLEKAKAFPGLKGLDLAKEVTTDELYSWTDGS---W 180
Query: 181 DFNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
++T + V+AYD+G KHNILR L GC++ VVP+ A++ L L PDGV
Sbjct: 181 TLGQGFNENQTDLPFHVVAYDYGAKHNILRMLVDRGCRLTVVPAKTSAADVLALNPDGVF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 241 LSNGPGDPEPCDYAIDAIKTLLDKDLPIFGICLGHQLLALASG 283
>gi|385339407|ref|YP_005893279.1| carbamoyl-phosphate synthase small subunit [Neisseria meningitidis
G2136]
gi|385855866|ref|YP_005902379.1| carbamoyl-phosphate synthase small subunit [Neisseria meningitidis
M01-240355]
gi|416207767|ref|ZP_11621001.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
961-5945]
gi|421538819|ref|ZP_15984991.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
93003]
gi|421547217|ref|ZP_15993255.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM183]
gi|421548189|ref|ZP_15994217.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM2781]
gi|421553422|ref|ZP_15999384.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM576]
gi|433467895|ref|ZP_20425344.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
87255]
gi|325141602|gb|EGC64066.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
961-5945]
gi|325197651|gb|ADY93107.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
G2136]
gi|325204807|gb|ADZ00261.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M01-240355]
gi|402315526|gb|EJU51089.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
93003]
gi|402321580|gb|EJU57053.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM183]
gi|402326911|gb|EJU62309.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM2781]
gi|402328099|gb|EJU63479.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM576]
gi|432201447|gb|ELK57528.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
87255]
Length = 377
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|167550757|ref|ZP_02344514.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|168464397|ref|ZP_02698300.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|418762536|ref|ZP_13318663.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|418768438|ref|ZP_13324486.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|418770488|ref|ZP_13326509.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|418777745|ref|ZP_13333672.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|418779277|ref|ZP_13335180.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|418786737|ref|ZP_13342550.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|418800972|ref|ZP_13356616.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|418869935|ref|ZP_13424366.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
gi|419788616|ref|ZP_14314300.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|419791620|ref|ZP_14317272.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|421885077|ref|ZP_16316280.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|195632836|gb|EDX51290.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|205324397|gb|EDZ12236.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|379985456|emb|CCF88553.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Senftenberg str. SS209]
gi|392616702|gb|EIW99131.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. Levine 1]
gi|392620483|gb|EIX02852.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. Levine 15]
gi|392731169|gb|EIZ88398.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35199]
gi|392736013|gb|EIZ93180.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35185]
gi|392737082|gb|EIZ94243.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21539]
gi|392743673|gb|EJA00743.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 33953]
gi|392747567|gb|EJA04565.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21559]
gi|392753433|gb|EJA10363.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35188]
gi|392782563|gb|EJA39197.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 35202]
gi|392833786|gb|EJA89397.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 4176]
Length = 382
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|398870592|ref|ZP_10625914.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM74]
gi|398207829|gb|EJM94572.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM74]
Length = 378
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K+ +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKDSYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATLEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|167562356|ref|ZP_02355272.1| carbamoyl phosphate synthase small subunit [Burkholderia
oklahomensis EO147]
Length = 381
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 182/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R +LG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMERSLGDYLRDEGVVAIAGLDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + + ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDEAKAIALARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+AYDFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAYDFGVKYNILRMLAERGCHVTVLPAQSSAADALALSPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|194448560|ref|YP_002044033.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|375117498|ref|ZP_09762665.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|417362683|ref|ZP_12136265.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
gi|194406864|gb|ACF67083.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|326621765|gb|EGE28110.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|353601796|gb|EHC57338.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Hvittingfoss str. A4-620]
Length = 391
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 289
>gi|398976142|ref|ZP_10686104.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM25]
gi|398139694|gb|EJM28689.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM25]
Length = 378
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKTQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|313669072|ref|YP_004049356.1| carbamoyl phosphate synthase small subunit [Neisseria lactamica
020-06]
gi|313006534|emb|CBN87998.1| carbamoyl phosphate synthase small subunit [Neisseria lactamica
020-06]
Length = 376
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTLDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|269215303|ref|ZP_05988098.2| carbamoyl-phosphate synthase, small subunit [Neisseria lactamica
ATCC 23970]
gi|269207836|gb|EEZ74291.1| carbamoyl-phosphate synthase, small subunit [Neisseria lactamica
ATCC 23970]
Length = 398
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 180/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSITGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|161869367|ref|YP_001598534.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
053442]
gi|416164366|ref|ZP_11607197.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
N1568]
gi|416193261|ref|ZP_11617100.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
ES14902]
gi|421551023|ref|ZP_15997024.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
69166]
gi|421557841|ref|ZP_16003738.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
80179]
gi|433472122|ref|ZP_20429500.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
68094]
gi|433474172|ref|ZP_20431526.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
97021]
gi|433478401|ref|ZP_20435710.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
70012]
gi|433482594|ref|ZP_20439849.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2006087]
gi|433484602|ref|ZP_20441821.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2002038]
gi|433486846|ref|ZP_20444035.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
97014]
gi|433493204|ref|ZP_20450290.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM586]
gi|433503549|ref|ZP_20460505.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM126]
gi|433526852|ref|ZP_20483474.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
69096]
gi|433539585|ref|ZP_20496052.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
70030]
gi|161594920|gb|ABX72580.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
053442]
gi|254672421|emb|CBA05764.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
alpha275]
gi|325127530|gb|EGC50455.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
N1568]
gi|325137539|gb|EGC60121.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
ES14902]
gi|402329560|gb|EJU64921.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
69166]
gi|402333560|gb|EJU68862.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
80179]
gi|432206748|gb|ELK62749.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
68094]
gi|432207490|gb|ELK63479.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
97021]
gi|432213295|gb|ELK69217.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
70012]
gi|432214614|gb|ELK70511.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2006087]
gi|432219688|gb|ELK75524.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2002038]
gi|432220445|gb|ELK76265.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
97014]
gi|432226807|gb|ELK82530.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM586]
gi|432239019|gb|ELK94579.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM126]
gi|432258905|gb|ELL14185.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
69096]
gi|432271605|gb|ELL26728.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
70030]
Length = 377
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|107022365|ref|YP_620692.1| carbamoyl phosphate synthase small subunit [Burkholderia
cenocepacia AU 1054]
gi|116689312|ref|YP_834935.1| carbamoyl phosphate synthase small subunit [Burkholderia
cenocepacia HI2424]
gi|105892554|gb|ABF75719.1| carbamoyl-phosphate synthase small subunit [Burkholderia
cenocepacia AU 1054]
gi|116647401|gb|ABK08042.1| carbamoyl-phosphate synthase small subunit [Burkholderia
cenocepacia HI2424]
Length = 380
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 181/275 (65%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + T S + + +E++RS++ + G+DL VS +PFEW ++ + + +
Sbjct: 127 TGAQSGCILT-GSDDEAKAIELARSFEGLAGMDLAKVVSTTKPFEWKQTEWRLEGGYGMQ 185
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + YRV+AYDFG+K+NILR LA GC + V+P+ A + L L PDG+ SNGPGDP
Sbjct: 186 E--APKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAEDALALNPDGIFLSNGPGDP 243
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A K + + VP FGIC+GHQ++G A+G
Sbjct: 244 EPCDYAIAATKAFIERGVPTFGICLGHQIMGLAVG 278
>gi|121634236|ref|YP_974481.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
FAM18]
gi|385324806|ref|YP_005879245.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
8013]
gi|433469979|ref|ZP_20427386.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
98080]
gi|433495320|ref|ZP_20452381.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM762]
gi|433497453|ref|ZP_20454481.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M7089]
gi|433498008|ref|ZP_20455024.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M7124]
gi|433501508|ref|ZP_20458489.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM174]
gi|120865942|emb|CAM09679.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
FAM18]
gi|261393193|emb|CAX50811.1| carbamoyl-phosphate synthase small chain (carbamoyl-phosphate
synthetase glutamine chain) [Neisseria meningitidis
8013]
gi|432201209|gb|ELK57292.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
98080]
gi|432227952|gb|ELK83654.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM762]
gi|432232227|gb|ELK87877.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M7089]
gi|432233349|gb|ELK88977.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM174]
gi|432236775|gb|ELK92379.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M7124]
Length = 377
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|407366519|ref|ZP_11113051.1| carbamoyl phosphate synthase small subunit [Pseudomonas mandelii
JR-1]
Length = 378
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKEQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L +KPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAADVLAMKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|385337417|ref|YP_005891290.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
WUE 2594]
gi|433476271|ref|ZP_20433606.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
88050]
gi|433515567|ref|ZP_20472338.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2004090]
gi|433518360|ref|ZP_20475099.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
96023]
gi|433524735|ref|ZP_20481390.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
97020]
gi|433527618|ref|ZP_20484230.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3652]
gi|433531118|ref|ZP_20487698.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3642]
gi|433532005|ref|ZP_20488572.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2007056]
gi|433535327|ref|ZP_20491859.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2001212]
gi|319409831|emb|CBY90140.1| carbamoyl-phosphate synthase small chain (carbamoyl-phosphate
synthetase glutamine chain) [Neisseria meningitidis WUE
2594]
gi|432208126|gb|ELK64105.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
88050]
gi|432251670|gb|ELL07033.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
96023]
gi|432253678|gb|ELL09019.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2004090]
gi|432257786|gb|ELL13079.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
97020]
gi|432264559|gb|ELL19761.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3642]
gi|432266518|gb|ELL21701.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3652]
gi|432268650|gb|ELL23817.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2007056]
gi|432269959|gb|ELL25107.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
2001212]
Length = 377
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|418857103|ref|ZP_13411734.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
gi|418864703|ref|ZP_13419228.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|392830155|gb|EJA85812.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19536]
gi|392835415|gb|EJA91011.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19470]
Length = 382
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|332306409|ref|YP_004434260.1| carbamoyl-phosphate synthase small subunit [Glaciecola sp.
4H-3-7+YE-5]
gi|332173738|gb|AEE22992.1| carbamoyl-phosphate synthase, small subunit [Glaciecola sp.
4H-3-7+YE-5]
Length = 381
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 183/283 (64%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGATGMSVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES + + GL+IR L + SN+R ++L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDCESTKVWAKGLIIRDLPLLASNFRNEQSLSEYLRANNILGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQEL-----LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
G+ G + ++ S+Q L LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 DKGAQNGCIIAVDANSEQSLDSDVGLEKAKAFPGLKGLDLAKEVTTDELYSWTDGS---W 180
Query: 181 DFNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
++T + V+AYD+G KHNILR L GC++ VVP+ A++ L L PDGV
Sbjct: 181 TLGQGFNENQTDLPFHVVAYDYGAKHNILRMLVDRGCRLTVVPAKTSAADVLALNPDGVF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 241 LSNGPGDPEPCDYAIDAIKTLLDKDLPIFGICLGHQLLALASG 283
>gi|398909497|ref|ZP_10654563.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM49]
gi|398187985|gb|EJM75307.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM49]
Length = 378
Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K+ +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKDSYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATLEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|152968621|ref|YP_001333730.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238893016|ref|YP_002917750.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|330009313|ref|ZP_08306504.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. MS
92-3]
gi|419761765|ref|ZP_14288016.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|150953470|gb|ABR75500.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545332|dbj|BAH61683.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|238774019|dbj|BAH66516.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
NTUH-K2044]
gi|238774051|dbj|BAH66547.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae]
gi|328534839|gb|EGF61383.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. MS
92-3]
gi|397745306|gb|EJK92513.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 391
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W T+ W
Sbjct: 131 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSW---TQGSWTLA 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+
Sbjct: 188 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAADVLALNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 289
>gi|451988354|ref|ZP_21936488.1| Carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
18A]
gi|451754007|emb|CCQ89011.1| Carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
18A]
Length = 378
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + +++ LE++R++ + G+DL +V+ E +EW S W+ +
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSV---WNLESDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|29140609|ref|NP_803951.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|213163013|ref|ZP_03348723.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E00-7866]
gi|213419769|ref|ZP_03352835.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E01-6750]
gi|213427506|ref|ZP_03360256.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E02-1180]
gi|213650150|ref|ZP_03380203.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. J185]
gi|289826209|ref|ZP_06545321.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-3139]
gi|378958204|ref|YP_005215690.1| carbamoyl-phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
gi|29136233|gb|AAO67800.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|374352076|gb|AEZ43837.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhi str. P-stx-12]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|365142600|ref|ZP_09347716.1| carbamoyl-phosphate synthase small chain [Klebsiella sp. 4_1_44FAA]
gi|386033098|ref|YP_005953011.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
KCTC 2242]
gi|424828899|ref|ZP_18253627.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|449056767|ref|ZP_21735431.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
hvKP1]
gi|339760226|gb|AEJ96446.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
KCTC 2242]
gi|363651382|gb|EHL90450.1| carbamoyl-phosphate synthase small chain [Klebsiella sp. 4_1_44FAA]
gi|414706315|emb|CCN28019.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
subsp. pneumoniae Ecl8]
gi|448875516|gb|EMB10531.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
hvKP1]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAADVLALNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|398847127|ref|ZP_10604061.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM84]
gi|398251868|gb|EJN37091.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM84]
Length = 378
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R++ + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARAFPGLKGMDLAKVVSTKESYEWRSSV---WELKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIEAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 280
>gi|319639063|ref|ZP_07993820.1| carbamoyl-phosphate synthase small subunit [Neisseria mucosa C102]
gi|317399641|gb|EFV80305.1| carbamoyl-phosphate synthase small subunit [Neisseria mucosa C102]
Length = 376
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGSQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCDYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|402782483|ref|YP_006638029.1| carbamoyl-phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|425078438|ref|ZP_18481541.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|425089070|ref|ZP_18492163.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|425089923|ref|ZP_18493008.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
gi|402543339|gb|AFQ67488.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405590299|gb|EKB63833.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW1]
gi|405600208|gb|EKB73375.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW3]
gi|405614487|gb|EKB87186.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW5]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAADVLALNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|116052905|ref|YP_793222.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115588126|gb|ABJ14141.1| carbamoyl-phosphate synthase small chain [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 378
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + +++ LE++R++ + G+DL +V+ E +EW S W +
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSV---WSLESDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|421177013|ref|ZP_15634670.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
CI27]
gi|404530101|gb|EKA40114.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
CI27]
Length = 378
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + +++ LE++R++ + G+DL +V+ E +EW S W +
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSV---WSLESDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLAVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|268598213|ref|ZP_06132380.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
MS11]
gi|268582344|gb|EEZ47020.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
MS11]
Length = 377
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 182/279 (65%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+ F
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGP
Sbjct: 182 VTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 240 GDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|378976911|ref|YP_005225052.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419973521|ref|ZP_14488945.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419980072|ref|ZP_14495359.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419985056|ref|ZP_14500199.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419990141|ref|ZP_14505114.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419996021|ref|ZP_14510825.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420003056|ref|ZP_14517704.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420007895|ref|ZP_14522387.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420013865|ref|ZP_14528174.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420019176|ref|ZP_14533370.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420024668|ref|ZP_14538680.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420031661|ref|ZP_14545481.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420037897|ref|ZP_14551548.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420042219|ref|ZP_14555713.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420048331|ref|ZP_14561645.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420053627|ref|ZP_14566804.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420059497|ref|ZP_14572504.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420065150|ref|ZP_14577957.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420071508|ref|ZP_14584153.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420075951|ref|ZP_14588425.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420083627|ref|ZP_14595905.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421913324|ref|ZP_16343011.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421917167|ref|ZP_16346730.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|428149960|ref|ZP_18997759.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428942730|ref|ZP_19015702.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
VA360]
gi|364516322|gb|AEW59450.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397346988|gb|EJJ40098.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397348160|gb|EJJ41262.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397353040|gb|EJJ46117.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397366142|gb|EJJ58761.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397367756|gb|EJJ60365.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397370363|gb|EJJ62946.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397379187|gb|EJJ71385.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397383981|gb|EJJ76108.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397389342|gb|EJJ81284.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397398605|gb|EJJ90267.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397399808|gb|EJJ91458.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397404854|gb|EJJ96340.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397415519|gb|EJK06704.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397416868|gb|EJK08038.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397423855|gb|EJK14772.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397432237|gb|EJK22901.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397435495|gb|EJK26110.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397440148|gb|EJK30562.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397447913|gb|EJK38098.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397451050|gb|EJK41142.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|410112788|emb|CCM85636.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410120510|emb|CCM89355.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426298112|gb|EKV60544.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
VA360]
gi|427540096|emb|CCM93897.1| Carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKASAADVLALNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|296313411|ref|ZP_06863352.1| carbamoyl-phosphate synthase, small subunit [Neisseria
polysaccharea ATCC 43768]
gi|296840069|gb|EFH24007.1| carbamoyl-phosphate synthase, small subunit [Neisseria
polysaccharea ATCC 43768]
Length = 377
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCDYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|206579451|ref|YP_002240499.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
342]
gi|206568509|gb|ACI10285.1| carbamoyl-phosphate synthase, small subunit [Klebsiella pneumoniae
342]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|161612393|ref|YP_001586358.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Paratyphi B str. SPB7]
gi|168243535|ref|ZP_02668467.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|198242031|ref|YP_002214021.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|419731515|ref|ZP_14258425.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|419736180|ref|ZP_14263042.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|419738031|ref|ZP_14264798.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|419744832|ref|ZP_14271482.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|419748777|ref|ZP_14275268.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|421568736|ref|ZP_16014449.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|421575868|ref|ZP_16021477.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|421580960|ref|ZP_16026512.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|421583806|ref|ZP_16029322.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|445147893|ref|ZP_21388496.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|445155824|ref|ZP_21392544.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
gi|161361757|gb|ABX65525.1| hypothetical protein SPAB_00082 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197936547|gb|ACH73880.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|205337514|gb|EDZ24278.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|381291073|gb|EIC32323.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41579]
gi|381292926|gb|EIC34100.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41563]
gi|381303513|gb|EIC44540.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41573]
gi|381307471|gb|EIC48326.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41566]
gi|381313155|gb|EIC53945.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. 41565]
gi|402518631|gb|EJW26005.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00326]
gi|402521047|gb|EJW28386.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00325]
gi|402529454|gb|EJW36688.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00322]
gi|402531707|gb|EJW38912.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. CFSAN00328]
gi|444844150|gb|ELX69396.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. SL1438]
gi|444848692|gb|ELX73815.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Dublin str. HWS51]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|425079805|ref|ZP_18482902.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|428933643|ref|ZP_19007190.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
JHCK1]
gi|405606730|gb|EKB79700.1| carbamoyl-phosphate synthase small chain [Klebsiella pneumoniae
subsp. pneumoniae WGLW2]
gi|426304779|gb|EKV66915.1| carbamoyl phosphate synthase small subunit [Klebsiella pneumoniae
JHCK1]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAADVLALNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|398992991|ref|ZP_10695950.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM21]
gi|398136068|gb|EJM25169.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM21]
Length = 378
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S+ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEAAAIAAAQGFPGLKGMDLAKVVSTKEQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|416930081|ref|ZP_11933423.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. TJI49]
gi|325525890|gb|EGD03601.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. TJI49]
Length = 381
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 183/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S++E+K+ +E++RS+ + G+DL VS +PFEW ++ +W
Sbjct: 128 KGAQNGCILAGSSDEAKA----IELARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + YRV+A+DFG+K+NILR LA GC + V+P+ A E L L PDG+ SNG
Sbjct: 181 SGYGMQEAPKYRVVAFDFGVKYNILRMLAERGCHVTVLPAQASAEEALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A + + + VP FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATRTFIERGVPTFGICLGHQIMGLAVG 279
>gi|437816192|ref|ZP_20842552.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
gi|435308782|gb|ELO83700.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SARB17]
Length = 382
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|237807799|ref|YP_002892239.1| carbamoyl-phosphate synthase small subunit [Tolumonas auensis DSM
9187]
gi|237500060|gb|ACQ92653.1| carbamoyl-phosphate synthase, small subunit [Tolumonas auensis DSM
9187]
Length = 376
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 173/277 (62%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG++++ S GA G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFKGVSIGAEGCSVGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GL+IR L + SN+R TL +YL + N++GI ++DTR +TR LR
Sbjct: 64 GTNSEDEESPNIHAQGLIIRDLPLVASNFRNQATLSDYLKKHNVVGIAEIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++++ + G+DL VS E +EW E + W
Sbjct: 124 EKGAQAGCIIAGGDLDEAKALAATKAFPGLKGMDLAKVVSCTEAYEWTEGS---WKLGQG 180
Query: 186 ERNSKTY--RVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
Y V+AYDFG+K NILR L GC++ VVP+ PA L + PDGV SNGPG
Sbjct: 181 HTKPAEYPFHVVAYDFGVKRNILRMLVDRGCRVTVVPAQTPAETVLAMNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA++ +K L +PVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAISAIKSFLETDLPVFGICLGHQLLALASG 277
>gi|90580538|ref|ZP_01236343.1| carbamoyl-phosphate synthase small subunit [Photobacterium angustum
S14]
gi|90438196|gb|EAS63382.1| carbamoyl-phosphate synthase small subunit [Photobacterium angustum
S14]
Length = 379
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + LE ++++ + G+DL +V+ E + W + + W
Sbjct: 124 EKGAQNGCIIAGNNIDEGFALEQAKAFPGLKGMDLAKEVTTSETYSWKQGS---WTLENG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
E Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKEDKELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKTFLDKNIPIFGICLGHQILALASG 280
>gi|417515177|ref|ZP_12178781.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|353655936|gb|EHC96821.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
Length = 396
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 289
>gi|290512620|ref|ZP_06551986.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. 1_1_55]
gi|289774961|gb|EFD82963.1| carbamoyl-phosphate synthase, small subunit [Klebsiella sp. 1_1_55]
Length = 391
Score = 256 bits (654), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 188 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAIDAIEKFLETDIPVFGICLGHQLLALASG 289
>gi|346724791|ref|YP_004851460.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346649538|gb|AEO42162.1| carbamoyl phosphate synthase small subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 374
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 173/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+R+ + AGL++R + SNWR L +L R ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEARKIWAAGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L + + G+DL VS ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTEKTYLWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y V+AYD+G+K NILR LA GC + VVP+ P +E L L+PDGV SNGPGDP
Sbjct: 184 VPAKYEVVAYDYGVKLNILRMLAERGCDVTVVPARTPVAEVLALQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +KEL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAIDAIKELIAQKVPTFGICLGHQLLALAAG 276
>gi|432468953|ref|ZP_19711017.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE205]
gi|432581222|ref|ZP_19817641.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE57]
gi|433075879|ref|ZP_20262491.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE129]
gi|433123191|ref|ZP_20308826.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE157]
gi|433186383|ref|ZP_20370591.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE85]
gi|430988555|gb|ELD05048.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE205]
gi|431123362|gb|ELE26102.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE57]
gi|431579080|gb|ELI51665.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE129]
gi|431636624|gb|ELJ04754.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE157]
gi|431698797|gb|ELJ63822.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE85]
Length = 382
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPYHVVAYDFGAKCNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|254252708|ref|ZP_04946026.1| Carbamoylphosphate synthase small subunit [Burkholderia dolosa
AUO158]
gi|124895317|gb|EAY69197.1| Carbamoylphosphate synthase small subunit [Burkholderia dolosa
AUO158]
Length = 388
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 186/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 15 ALLALADGTVFRGYSIGADGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 74
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R + TLG+YL + ++ I +DTR +TR LR
Sbjct: 75 VNAEDVEATKVHAAGLIIRDLPTLASNFRMSRTLGDYLRDEGVVAIAGIDTRKLTRILRD 134
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS +PFEW ++ +W
Sbjct: 135 KGAQNGCILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLG 187
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNG
Sbjct: 188 SGYGMQEAPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNG 247
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 248 PGDPEPCDYAIAATKEFIARGVPTFGICLGHQIMGLAVG 286
>gi|94500163|ref|ZP_01306697.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Bermanella marisrubri]
gi|94427736|gb|EAT12712.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Oceanobacter sp. RED65]
Length = 376
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 178/276 (64%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI++ + GA G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 AILALEDGSIFKGTAIGADGHSVGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNYG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E Q + +GLVIR L + SN+R + L YL +RN++ I D+DTR +TR LR+
Sbjct: 65 TTSEDAECDQIWASGLVIRDLPLVASNFRSEQALDEYLRQRNVVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
GSL G + + + LE+++ + + G+DL +V+ + + W E++ W H
Sbjct: 125 KGSLNGCVMAGDDVDTDKALELAKGFAGLKGMDLAKEVTTDKTYTWNETS---WQLGVGH 181
Query: 186 ERNS-KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ ++V+AYD+G+K NILR L C++ VVP+ PA + L + PDG+ SNGPGD
Sbjct: 182 EKKEGGQFKVVAYDYGVKRNILRMLVDRDCELTVVPAQTPAKDVLAMNPDGIFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+A +KE+L +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIAAIKEILETDIPVFGICLGHQLLALASG 277
>gi|288937199|ref|YP_003441258.1| carbamoyl-phosphate synthase, small subunit [Klebsiella variicola
At-22]
gi|288891908|gb|ADC60226.1| carbamoyl-phosphate synthase, small subunit [Klebsiella variicola
At-22]
Length = 382
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 134/282 (47%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIEKFLETDIPVFGICLGHQLLALASG 280
>gi|323497905|ref|ZP_08102914.1| carbamoyl phosphate synthase small subunit [Vibrio sinaloensis DSM
21326]
gi|323316950|gb|EGA69952.1| carbamoyl phosphate synthase small subunit [Vibrio sinaloensis DSM
21326]
Length = 379
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGVSIGADGSSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESSSIHAQGLVIRDLPLVASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + S + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNSLDETLALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAQDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|262376631|ref|ZP_06069859.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter lwoffii
SH145]
gi|262308341|gb|EEY89476.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter lwoffii
SH145]
gi|407008499|gb|EKE23861.1| hypothetical protein ACD_6C00311G0010 [uncultured bacterium]
Length = 379
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNEEDAESGRIHKVWANGLIIRDLPLLHSNFRSTQSLAEYLVQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ ++ E LE +R++ + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEAEALEKARAFGGLNGLDLAKECCDPEGFEWTEGS---WTLG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ + V+AYD+G+K NILR LA GC++ VVP+ PA++ L L PDGV SNGP
Sbjct: 182 KGFSQPEAKFHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPAADVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ ++PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTEIPVFGICLGHQILALASG 280
>gi|421163342|ref|ZP_15622063.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|404529153|gb|EKA39204.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
ATCC 25324]
Length = 378
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + +++ LE++R++ + G+DL +V+ E +EW S W+ +
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSA---WNLESDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLSVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|420141952|ref|ZP_14649586.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
CIG1]
gi|403245259|gb|EJY59081.1| carbamoyl phosphate synthase small subunit [Pseudomonas aeruginosa
CIG1]
Length = 378
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D E+ + + AGL+IR L + SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 65 TTPEDAEANRVWAAGLIIRDLPLIASNWRSKQSLPDYLKANGTVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
GS G + +++ LE++R++ + G+DL +V+ E +EW S W+ +
Sbjct: 125 KGSQNGCILAGADATEERALELARAFPGLKGMDLAKEVTTAERYEWRSSV---WNLESDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDG+ SNG
Sbjct: 182 HPEIPAGELPYHVVAYDYGVKLNILRMLVARGCRLSVVPAQTPASEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIREFLDTEIPVFGICLGHQLLALASG 280
>gi|261856157|ref|YP_003263440.1| carbamoyl-phosphate synthase, small subunit [Halothiobacillus
neapolitanus c2]
gi|261836626|gb|ACX96393.1| carbamoyl-phosphate synthase, small subunit [Halothiobacillus
neapolitanus c2]
Length = 377
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 173/277 (62%), Gaps = 8/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ S GA G+ VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 ALLALADGSLFYGTSVGAEGSTVGEVVFNTAMTGYQEILTDPSYRRQIVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES AGLVIR S SNWR E+L Y + I D+DTRA+TR LR
Sbjct: 65 VNAEDAESTGVHAAGLVIRDASAIVSNWRSEESLQAYCERHGLQAIADIDTRALTRVLRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDF---N 183
G+ G + T E+ + L +R + + G+DL+ +V+ EW + T WD N
Sbjct: 125 KGAQNGCIQTGENLDPETALAQARGFAGLDGMDLVPEVTTDRTIEWTQGT---WDLDPEN 181
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
R T V+ +D+G+KHNILR L GC++ ++P+T PAS+ L + PDG+L NGPG
Sbjct: 182 PAPRPELTRHVVTWDYGMKHNILRMLVDRGCRVTMLPATTPASDVLAMNPDGILLGNGPG 241
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP+A YA+ + E+L VPVFGIC+GHQLL A G
Sbjct: 242 DPAACHYAIEAITEVLKHDVPVFGICLGHQLLALASG 278
>gi|134299539|ref|YP_001113035.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
reducens MI-1]
gi|134052239|gb|ABO50210.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
reducens MI-1]
Length = 359
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 183/273 (67%), Gaps = 17/273 (6%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ K FGA+G Q GEVVFNT +TGYQE+LTDPSY GQ V+MT P IGN G
Sbjct: 3 AYLVLEDGTVFTGKGFGATGEQWGEVVFNTGMTGYQEVLTDPSYCGQIVVMTYPLIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N DD E++ F+ G V++ SNWR + + +LA ++GI +DTRA+TRR+R
Sbjct: 63 INKDDFEAKSSFVRGFVVKEECDRPSNWRVSNKIQEFLAREGVLGIAGIDTRALTRRIRN 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ G++ST ++ QEL+ +++ I G +L+ V+ KE + T P
Sbjct: 123 HGTMRGIIST-QAMDPQELVARAKNCPQISGQELVPTVATKEIY-----TVP-------- 168
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+RV+ DFG K NI+R L + C++IVVP T A + L L P+G++ SNGPGDP+
Sbjct: 169 --GDGHRVLLIDFGAKANIVRCLNNRKCEVIVVPPTTTAKDILALNPEGIMLSNGPGDPT 226
Query: 247 AVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
VPYAV IV++L+GKVP+FGIC+GHQ+LG A+G
Sbjct: 227 DVPYAVEIVRDLIGKVPIFGICLGHQILGLAVG 259
>gi|449143721|ref|ZP_21774544.1| carbamoyl-phosphate synthase, small subunit [Vibrio mimicus CAIM
602]
gi|449080719|gb|EMB51630.1| carbamoyl-phosphate synthase, small subunit [Vibrio mimicus CAIM
602]
Length = 379
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+RC ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRCEKSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL V+ +E ++W + + W
Sbjct: 124 EKGAQNGCIMAGDKLDEALALAKAKEFPGLKGMDLAKVVTTQEAYQWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADCDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|343492106|ref|ZP_08730479.1| carbamoyl phosphate synthase small subunit [Vibrio nigripulchritudo
ATCC 27043]
gi|342827446|gb|EGU61834.1| carbamoyl phosphate synthase small subunit [Vibrio nigripulchritudo
ATCC 27043]
Length = 379
Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 178/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGQSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W +
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLESG 180
Query: 186 ERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|28897244|ref|NP_796849.1| carbamoyl phosphate synthase small subunit [Vibrio parahaemolyticus
RIMD 2210633]
gi|31340008|sp|Q87SF4.1|CARA_VIBPA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|28805453|dbj|BAC58733.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus RIMD 2210633]
Length = 379
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 176/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGVSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W +
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLESGL 181
Query: 187 RNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|388258742|ref|ZP_10135917.1| carbamoyl-phosphate synthase subunit A [Cellvibrio sp. BR]
gi|387937501|gb|EIK44057.1| carbamoyl-phosphate synthase subunit A [Cellvibrio sp. BR]
Length = 403
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 179/275 (65%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DGS++R + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 29 KAILVLADGSVFRGTAIGAEGLSVGEVVFNTAITGYQEILTDPSYAQQIVTLTYPHIGNT 88
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE + + GLVIR L + SN+R E L +YL RN++GI D+DTR +TR LR
Sbjct: 89 GTNSEDEECERIWATGLVIRDLPLLASNFRNQENLSDYLKARNVIGIADIDTRRLTRILR 148
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ G L + + + L ++++ + G+DL +V+ E + W ES+ + +
Sbjct: 149 DKGAQNGCLMAGDDIDEAKALAAAKAFGGLKGLDLAKEVTVSESYTWNESSWTLGEGHKA 208
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+K ++V+AYD+G+K NILR LA C++IVVP+ A+E L L PDGV SNGPGDP
Sbjct: 209 LTGAKKFKVVAYDYGVKRNILRMLADRDCELIVVPAKTTAAEVLALNPDGVFLSNGPGDP 268
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ +K +L PVFGIC+GHQLL A G
Sbjct: 269 EPCTYAIEAIKNILETDTPVFGICLGHQLLALASG 303
>gi|77456993|ref|YP_346498.1| carbamoyl phosphate synthase small subunit [Pseudomonas fluorescens
Pf0-1]
gi|77380996|gb|ABA72509.1| carbamoyl-phosphate synthase small chain [Pseudomonas fluorescens
Pf0-1]
Length = 386
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 73 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K +EW + WD T
Sbjct: 133 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKTQYEWRSTV---WDLKTDS 189
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 190 HATIEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 249
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 250 PGDPEPCDYAIQAIKEVLETEIPVFGICLGHQLLALASG 288
>gi|296133334|ref|YP_003640581.1| carbamoyl-phosphate synthase small subunit [Thermincola potens JR]
gi|296031912|gb|ADG82680.1| carbamoyl-phosphate synthase, small subunit [Thermincola potens JR]
Length = 359
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 176/274 (64%), Gaps = 19/274 (6%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ K FGA G Q GEVVFNT +TGYQEILTDPSY Q + MT P IGN G
Sbjct: 3 AVLVLEDGTVYEGKGFGAVGEQFGEVVFNTGMTGYQEILTDPSYCSQIITMTYPLIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES + F G V+R SNWR +T+ YL E+ I+GI VDTRA+TRRLR
Sbjct: 63 INDEDFESIRPFCKGFVVREFCEHPSNWRSGKTVNEYLKEKGIVGISGVDTRALTRRLRN 122
Query: 128 DGSLIGVLSTEESKSDQ--ELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G++ G++++ + D+ E ++ +W G +L+ +V+ +EP+
Sbjct: 123 HGTMGGIIASGDFDIDELKEKVKQPPTW--TGPELVLEVTTREPYNL------------- 167
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ Y+V+ DFG K NI R L + GC + VVP+ A E L + PDG++ SNGPGDP
Sbjct: 168 --PNDGYKVVLMDFGAKKNIARSLHNLGCDVTVVPAQTTAEEILAMNPDGIMLSNGPGDP 225
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+AVP+A+ VK+LLG+ P+FGIC+GHQ+LG A G
Sbjct: 226 AAVPFAIETVKKLLGEKPIFGICLGHQILGLAFG 259
>gi|421862936|ref|ZP_16294638.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379467|emb|CBX21833.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 376
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSITGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|284928775|ref|YP_003421297.1| carbamoyl-phosphate synthase small subunit [cyanobacterium UCYN-A]
gi|284809234|gb|ADB94939.1| carbamoyl-phosphate synthase small subunit [cyanobacterium UCYN-A]
Length = 383
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 185/277 (66%), Gaps = 7/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+ + SFGA GT +GEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 6 ALLVLADGTFFEGLSFGAKGTVMGEVVFNTGMTGYQEVLTDPSYYGQIVNFTCPELGNTG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N DD+ES + + G++ ++++ SNWR E+L +YL I+ IY +DTR +TR++R
Sbjct: 66 INDDDQESDRPHVFGVIAKNITYRPSNWRSTESLPDYLIRHGIVSIYGIDTRQLTRKIRA 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ G++STE + + ++ + + G++L+ V+ + ++W +T W+F H
Sbjct: 126 MGAMNGIISTEILDKETLISKLKSAPPMEGLNLVKKVTTNKIYQWSIATNEKWEFVDH-- 183
Query: 188 NSKTYR----VIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+S+T + VI DFGIK NIL+RL SYGC++IVVP + L PDG+ SNGPG
Sbjct: 184 HSQTVKDLLTVIVVDFGIKRNILKRLVSYGCKVIVVPVDTELNSILNYDPDGIFLSNGPG 243
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP++V + +VK L+G ++P+FGICMGHQ+L ALG
Sbjct: 244 DPASVSEGINLVKLLIGTEIPIFGICMGHQILSLALG 280
>gi|167574347|ref|ZP_02367221.1| carbamoyl phosphate synthase small subunit [Burkholderia
oklahomensis C6786]
Length = 381
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 182/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHVGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R +LG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPALASNFRMERSLGDYLRDEGVVAIAGLDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T S + + + ++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCILT-GSDDEAKAIALARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 183
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+T YRV+AYDFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQETPRYRVVAYDFGVKYNILRMLAERGCHVTVLPAQSSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|381152052|ref|ZP_09863921.1| carbamoyl-phosphate synthase, small subunit [Methylomicrobium album
BG8]
gi|380884024|gb|EIC29901.1| carbamoyl-phosphate synthase, small subunit [Methylomicrobium album
BG8]
Length = 373
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 174/274 (63%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLE+G++++ S G G VGEVVFNT++TGYQEIL+DPSYA Q V +T PHIGNTG
Sbjct: 5 ALLVLEEGTVFQGTSIGVDGCSVGEVVFNTAMTGYQEILSDPSYARQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES Q F +GLVIR L + SN+RC +TL YL ++ I D+DTR +TR LR
Sbjct: 65 CNSEDNESAQVFASGLVIRDLPVLASNFRCGQTLRQYLEANRVVAIADIDTRKLTRLLRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + E+ + S+ + G+DL VS E +EW E+ +T
Sbjct: 125 KGAQRGAIVAGETADAEAAKAAIESFPGLKGMDLAKVVSAAETYEWTENIWQLGKGHTQA 184
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
N + VIAYDFG+K NILR LA+ GC++ VVP+ PA L + PDGV SNGPGDP
Sbjct: 185 GNLAKH-VIAYDFGVKRNILRLLANRGCRVTVVPAETPAETVLAMNPDGVFLSNGPGDPE 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ ++++L + PVFGIC+GHQLL A G
Sbjct: 244 PCTYAIEAIRKILETQTPVFGICLGHQLLALASG 277
>gi|78065903|ref|YP_368672.1| carbamoyl phosphate synthase small subunit [Burkholderia sp. 383]
gi|77966648|gb|ABB08028.1| carbamoyl-phosphate synthase small subunit [Burkholderia sp. 383]
Length = 380
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 181/275 (65%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 VNAEDVEATKVHAAGLIIRDLPSLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + T S + + +E++RS+ + G+DL VS +PFEW ++ + + +
Sbjct: 127 KGAQNGCILT-GSDDEAKAIELARSFPGLAGMDLAKVVSTTKPFEWKQTEWRLEGGYGMQ 185
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + YRV+AYDFG+K+NILR LA GC + V+P+ A + L L PDGV SNGPGDP
Sbjct: 186 E--APKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAEDALALNPDGVFLSNGPGDP 243
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A K+ + + VP FGIC+GHQ++G A+G
Sbjct: 244 EPCDYAIAATKQFIERGVPTFGICLGHQIMGLAVG 278
>gi|392550287|ref|ZP_10297424.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas spongiae UST010723-006]
Length = 376
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 174/278 (62%), Gaps = 8/278 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGISVGEVVFNTSMTGYQEILTDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + + GLVIR L + SN+R ++L YL RNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEASKIWAKGLVIRDLPLLASNFRNEQSLDEYLKSRNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + + + L + G+DL V KE + W E++ W F
Sbjct: 124 DKGAQNGCIIAGDVDEAKALEAAKAFPGLKGMDLAKVVCTKEQYTWNETS---WTLGEGF 180
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T + V+AYDFG+K NILR L GC++ VVP+ PA++ L L PDG+ SNGP
Sbjct: 181 KTLSDEDAKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTPAADVLALNPDGIFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GDP+ YA+ +K L P+FGIC+GHQLL A G
Sbjct: 241 GDPAPCIYAIEAIKTFLETDTPIFGICLGHQLLALASG 278
>gi|444377634|ref|ZP_21176843.1| Carbamoyl-phosphate synthase small chain [Enterovibrio sp. AK16]
gi|443678218|gb|ELT84890.1| Carbamoyl-phosphate synthase small chain [Enterovibrio sp. AK16]
Length = 379
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 179/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGESIGADGTAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES + GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNTEDEESSKIHAQGLVIRDLPLIASNFRNQQSLSDYLKSQNIVGIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + ++ + L ++ + + G+DL +V+ E +EW + + W
Sbjct: 124 EKGAQNGCIVAGDNIDEALALAKAKEFPGLKGMDLAKEVTTAEAYEWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A + L + PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPAPCEYAIEATKVFLDKGLPIFGICLGHQILALASG 280
>gi|389711029|ref|ZP_10186902.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp. HA]
gi|388610118|gb|EIM39251.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp. HA]
Length = 380
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 184/287 (64%), Gaps = 25/287 (8%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGCTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG YL + N++ I D+DTR +TR
Sbjct: 65 CNEEDAESGRIHKVWANGLIIRDLPLLHSNFRAEQSLGEYLEQHNVVAIADIDTRRLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST------- 176
LR G+ G + E+ +++E LE +R++ + G+DL + E FEW E +
Sbjct: 125 LRDKGAQNGCILAGENITEEEALEKARAFGGLNGLDLAKECCDPEGFEWTEGSWTLGKGF 184
Query: 177 -KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+P++ F+ V+AYD+G+K NILR LA GC++ VVP+ PA++ L L PDG
Sbjct: 185 AQPEFKFH----------VVAYDYGVKTNILRMLADRGCKLTVVPAQTPAADVLALNPDG 234
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLG---KVPVFGICMGHQLLGQALG 279
V SNGPGDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 235 VFLSNGPGDPAACDYAIEAVKTIVEDARNIPVFGICLGHQILALASG 281
>gi|334129575|ref|ZP_08503379.1| Carbamoyl phosphate synthetase small subunit [Methyloversatilis
universalis FAM5]
gi|333445260|gb|EGK73202.1| Carbamoyl phosphate synthetase small subunit [Methyloversatilis
universalis FAM5]
Length = 380
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 171/269 (63%), Gaps = 6/269 (2%)
Query: 14 DGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDE 73
DG+++ KS GA GEVVFNT+LTGYQEILTDPSY Q V +T PHIGNTGVN +D
Sbjct: 13 DGTVFHGKSIGAETVTTGEVVFNTALTGYQEILTDPSYTRQIVTLTYPHIGNTGVNVEDV 72
Query: 74 ESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIG 133
E+ + F AGLVIR L + +SN+R +TL YL E+ I GI ++DTR +TR LR+ G+
Sbjct: 73 EAGRVFAAGLVIRDLPLRSSNFRSHQTLDAYLREQGIPGIANIDTRKLTRLLREKGAQSA 132
Query: 134 VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH--ERNSKT 191
L + + + + + + G+DL VS P+EW E +W + ++
Sbjct: 133 CLMAGKVDAAEAVAKAREFAGLAGMDLAKVVSATAPYEWTEG---EWQLGQGFVKPDATP 189
Query: 192 YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYA 251
+ V+AYDFG+K NILR LAS GC++ VVP+ PA L + PDGV SNGPGDP YA
Sbjct: 190 FHVVAYDFGVKRNILRMLASRGCRLTVVPAQTPADTVLAMNPDGVFLSNGPGDPEPCDYA 249
Query: 252 VAIVKELLG-KVPVFGICMGHQLLGQALG 279
+A ++ L ++P FGIC+GHQL+G A G
Sbjct: 250 IAAIRTFLDRRIPTFGICLGHQLMGLAAG 278
>gi|325266830|ref|ZP_08133501.1| carbamoyl-phosphate synthase, small subunit [Kingella denitrificans
ATCC 33394]
gi|324981571|gb|EGC17212.1| carbamoyl-phosphate synthase, small subunit [Kingella denitrificans
ATCC 33394]
Length = 377
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS KE +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCKEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LA+ GC++ VVP+ A E L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEEVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|302037854|ref|YP_003798176.1| carbamoyl-phosphate synthase small subunit [Candidatus Nitrospira
defluvii]
gi|300605918|emb|CBK42251.1| Carbamoyl-phosphate synthase, small subunit [Candidatus Nitrospira
defluvii]
Length = 394
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 8/282 (2%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A L L DG+ + ++ GA G GEVVFNT++TGYQE+LTDPSY GQ V MT PHIG
Sbjct: 1 MKKAILALADGTWFEGRALGAEGETGGEVVFNTAMTGYQEVLTDPSYRGQIVTMTCPHIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N GV +D ES + + G V++ S SNWR TL YL NI+ I +DTRA+T
Sbjct: 61 NYGVTPEDIESTRIWAEGFVVKESSRLASNWRSKATLQEYLQAANIVAIEGIDTRALTTH 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN- 183
LR+ G+ GV+S + + + ++ I+G DL + V+ + + W T DW
Sbjct: 121 LREKGAQPGVISHIDLDPRRLADKARKAPSIIGRDLAATVTCERRYTWTAGTG-DWAPKL 179
Query: 184 ------THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+ KT+RV+AYDFG+K NILRRL GC++ VVP++ PA + L L P G+
Sbjct: 180 TIPAPGATQAARKTWRVVAYDFGVKQNILRRLVDVGCEVTVVPASTPAKDVLALNPQGLF 239
Query: 238 FSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP VPYA+ ++EL+G++P+FGIC+GHQLLG ALG
Sbjct: 240 LSNGPGDPEGVPYAMDALRELIGRLPIFGICLGHQLLGLALG 281
>gi|253690009|ref|YP_003019199.1| carbamoyl-phosphate synthase, small subunit [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756587|gb|ACT14663.1| carbamoyl-phosphate synthase, small subunit [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +DEES GLVIR L + SN+R E+L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAAVALEKAKAFPGLKGMDLAKEVTTAESYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GELPAAKNESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIRAIKTFLDTDIPVFGICLGHQLLALASG 280
>gi|168820961|ref|ZP_02832961.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|194444919|ref|YP_002039296.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|200387333|ref|ZP_03213945.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|409248476|ref|YP_006884317.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|418805757|ref|ZP_13361335.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|418810118|ref|ZP_13365659.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|418816454|ref|ZP_13371946.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|418820824|ref|ZP_13376255.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|418827594|ref|ZP_13382725.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22462]
gi|418830667|ref|ZP_13385628.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|418834254|ref|ZP_13389165.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|418842751|ref|ZP_13397560.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|418849840|ref|ZP_13404562.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|418855275|ref|ZP_13409933.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
gi|194403582|gb|ACF63804.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|199604431|gb|EDZ02976.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205342509|gb|EDZ29273.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|320084304|emb|CBY94097.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|392782229|gb|EJA38866.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22513]
gi|392783984|gb|EJA40593.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21550]
gi|392789815|gb|EJA46317.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21538]
gi|392791562|gb|EJA48031.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22425]
gi|392798071|gb|EJA54359.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 22462]
gi|392801357|gb|EJA57585.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM N18486]
gi|392806162|gb|EJA62277.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM N1543]
gi|392806464|gb|EJA62562.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 21554]
gi|392819914|gb|EJA75771.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 37978]
gi|392821955|gb|EJA77775.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19593]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIEKFLQTDIPVFGICLGHQLLALASG 280
>gi|354596112|ref|ZP_09014129.1| carbamoyl-phosphate synthase, small subunit [Brenneria sp. EniD312]
gi|353674047|gb|EHD20080.1| carbamoyl-phosphate synthase, small subunit [Brenneria sp. EniD312]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E+L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGANDADEESPAIQAQGLVIRDLPLIASNYRSEESLSDYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQSGCIIAGDAPDAALALEKARAFPGLKGMDLAKEVTTAESYGWTQGS---WTLE 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
++ Y V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDG+
Sbjct: 179 GGLPAAKAQSELPYHVVAYDYGVKRNILRLLVDRGCRLTVVPAQTPAEEVLKLDPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPQPCDYAIRAIKAFLDTDIPVFGICLGHQLLALASG 280
>gi|416018568|ref|ZP_11565496.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|416025172|ref|ZP_11568953.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|422403937|ref|ZP_16480993.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320322540|gb|EFW78633.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|320329991|gb|EFW85978.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330875235|gb|EGH09384.1| carbamoyl phosphate synthase small subunit [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 378
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +LG+YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKLSLGDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + S++ + +R + + G+DL +VS K+ +EW S W+ T
Sbjct: 125 KGAQNGCIMAGDDISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRSSV---WNLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PAS+ L KPDGV SNG
Sbjct: 182 HPEIAASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPASDVLAYKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++ +L +VPVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIRGVLQTEVPVFGICLGHQLLALAAG 280
>gi|384427740|ref|YP_005637099.1| carbamoyl-phosphate synthase small subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341936842|gb|AEL06981.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 375
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N D+E++Q + AGL++R + S+WR L ++L R ++ I +DTR +TR LR+
Sbjct: 65 FNDQDDEAKQVWAAGLIVRDVPRRPSSWRNQVALPDWLQTRGVVAISGIDTRKLTRLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L + + G+DL VS + ++W E + D D N +
Sbjct: 125 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTETTYQWQEG-QLDLDANAFVQ 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYD+G+K NILR LA GC + VVP+ P +E L L+PDGV SNGPGDP
Sbjct: 184 AELKFKVVAYDYGVKINILRMLAERGCDVTVVPAQTPVAEVLALQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ ++EL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAITAIQELIAKKVPTFGICLGHQLLALAAG 276
>gi|227329312|ref|ZP_03833336.1| carbamoyl phosphate synthase small subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +DEES GLVIR L + SN+R E+L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAAVALEKAKAFPGLKGMDLAKEVTTAESYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GELPAAKNESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIRAIKTFLETDIPVFGICLGHQLLALASG 280
>gi|419912791|ref|ZP_14431238.1| carbamoyl phosphate synthase small subunit [Escherichia coli KD1]
gi|388390691|gb|EIL52167.1| carbamoyl phosphate synthase small subunit [Escherichia coli KD1]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWAQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|386742797|ref|YP_006215976.1| carbamoyl phosphate synthase small subunit [Providencia stuartii
MRSN 2154]
gi|384479490|gb|AFH93285.1| carbamoyl phosphate synthase small subunit [Providencia stuartii
MRSN 2154]
Length = 387
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 174/279 (62%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTEFHGRAIGAEGAAVGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES GL+IR L + SN+R E L YL N++ I D+DTR +TR
Sbjct: 62 NVGTNADDEESPNVHAQGLIIRDLPLVYSNFRGQEGLSEYLKRHNVVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + ++ LE +R++ + G+DL +V KE + W + T D
Sbjct: 122 LREKGAQNGCIIAGDAPDAALALEKARAFSGLNGLDLAKEVCTKEAYSWTQGSWTLADGQ 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+T PA L + PDG+ SNG
Sbjct: 182 LSAKSEDELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMDPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +++ L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIKAIQDFLKTEIPVFGICLGHQLLALASG 280
>gi|417284613|ref|ZP_12071908.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli 3003]
gi|417293673|ref|ZP_12080952.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli B41]
gi|419937991|ref|ZP_14454836.1| carbamoyl phosphate synthase small subunit [Escherichia coli 75]
gi|422773047|ref|ZP_16826733.1| carbamoyl-phosphate synthase [Escherichia coli E482]
gi|423700818|ref|ZP_17675277.1| carbamoyl-phosphate synthase small chain [Escherichia coli H730]
gi|432561956|ref|ZP_19798589.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE51]
gi|432735499|ref|ZP_19970291.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE42]
gi|433046062|ref|ZP_20233507.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE120]
gi|442594153|ref|ZP_21012076.1| Carbamoyl-phosphate synthase small chain [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|323939748|gb|EGB35950.1| carbamoyl-phosphate synthase [Escherichia coli E482]
gi|385713739|gb|EIG50668.1| carbamoyl-phosphate synthase small chain [Escherichia coli H730]
gi|386242822|gb|EII84557.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli 3003]
gi|386251861|gb|EIJ01553.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli B41]
gi|388411284|gb|EIL71468.1| carbamoyl phosphate synthase small subunit [Escherichia coli 75]
gi|431100919|gb|ELE05888.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE51]
gi|431287770|gb|ELF78556.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE42]
gi|431574362|gb|ELI47143.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE120]
gi|441605978|emb|CCP97356.1| Carbamoyl-phosphate synthase small chain [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|418288988|ref|ZP_12901391.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM233]
gi|372200587|gb|EHP14641.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM233]
Length = 399
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|339489453|ref|YP_004703981.1| carbamoyl phosphate synthase, small subunit [Pseudomonas putida
S16]
gi|431804522|ref|YP_007231425.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
HB3267]
gi|338840296|gb|AEJ15101.1| carbamoyl phosphate synthase, small subunit [Pseudomonas putida
S16]
gi|430795287|gb|AGA75482.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
HB3267]
Length = 378
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R++ + G+DL VS KE +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARAFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIEAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 280
>gi|429334701|ref|ZP_19215354.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
CSV86]
gi|428760593|gb|EKX82854.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida
CSV86]
Length = 378
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/279 (48%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTAEDAESDRVWSAGLVIRDLPLIASNWRNTLSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R + + G+DL VS K +EW S W+ T
Sbjct: 125 KGAQNGCILAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKSAYEWRSSV---WELKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+AYD+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 182 HPTIEAADLPYHVVAYDYGVKLNILRMLVARGCRLTVVPAQTPASEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKEILETDIPVFGICLGHQLLALASG 280
>gi|416214608|ref|ZP_11622972.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M01-240013]
gi|325143746|gb|EGC66063.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M01-240013]
Length = 399
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 299
>gi|215485193|ref|YP_002327624.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|312966152|ref|ZP_07780378.1| carbamoyl-phosphate synthase small chain [Escherichia coli 2362-75]
gi|417753841|ref|ZP_12401938.1| carA [Escherichia coli DEC2B]
gi|419005741|ref|ZP_13553199.1| carA [Escherichia coli DEC1C]
gi|419011574|ref|ZP_13558944.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC1D]
gi|419016508|ref|ZP_13563836.1| carA [Escherichia coli DEC1E]
gi|419022103|ref|ZP_13569352.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC2A]
gi|419026996|ref|ZP_13574200.1| carA [Escherichia coli DEC2C]
gi|419032890|ref|ZP_13579991.1| carA [Escherichia coli DEC2D]
gi|419037777|ref|ZP_13584840.1| carA [Escherichia coli DEC2E]
gi|432430190|ref|ZP_19672640.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE187]
gi|432800348|ref|ZP_20034340.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE84]
gi|432842290|ref|ZP_20075719.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE141]
gi|433210677|ref|ZP_20394324.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE97]
gi|215263265|emb|CAS07580.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|312289395|gb|EFR17289.1| carbamoyl-phosphate synthase small chain [Escherichia coli 2362-75]
gi|377851482|gb|EHU16427.1| carA [Escherichia coli DEC1C]
gi|377865108|gb|EHU29900.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC1D]
gi|377867715|gb|EHU32469.1| carA [Escherichia coli DEC1E]
gi|377869186|gb|EHU33903.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC2A]
gi|377880771|gb|EHU45337.1| carA [Escherichia coli DEC2B]
gi|377884821|gb|EHU49329.1| carA [Escherichia coli DEC2D]
gi|377886232|gb|EHU50714.1| carA [Escherichia coli DEC2C]
gi|377899285|gb|EHU63633.1| carA [Escherichia coli DEC2E]
gi|430957496|gb|ELC76148.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE187]
gi|431352081|gb|ELG38865.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE84]
gi|431399066|gb|ELG82485.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE141]
gi|431726548|gb|ELJ90357.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE97]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|56412338|ref|YP_149413.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197361275|ref|YP_002140910.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|238911125|ref|ZP_04654962.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|56126595|gb|AAV76101.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197092750|emb|CAR58174.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIEKFLQTDIPVFGICLGHQLLALASG 280
>gi|388547476|ref|ZP_10150740.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. M47T1]
gi|388274397|gb|EIK93995.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. M47T1]
Length = 378
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I VDTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGVDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ ++W S W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKQAYQWRSSV---WNLATDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PA + L L PDGV SNG
Sbjct: 182 HPEIADSELPYHVVAYDYGVKVNILRMLVERGCRLTVVPAQTPAKDVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIQAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|299532310|ref|ZP_07045703.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
S44]
gi|298719718|gb|EFI60682.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
S44]
Length = 388
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 183/286 (63%), Gaps = 13/286 (4%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N +A L L DG+++ S GA GT VGEVVFNTSLTGYQEILTDPSY Q V +T PHI
Sbjct: 6 NFPSAILALADGTVFIGNSIGAQGTTVGEVVFNTSLTGYQEILTDPSYCQQIVTLTYPHI 65
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVN +D E+ + AGL+I++L + SN+R +TL YL E + I ++DTR +TR
Sbjct: 66 GNYGVNPEDVEADKIHAAGLIIKNLPLLASNFRSTQTLSEYLTEGKTVAIANIDTRKLTR 125
Query: 124 RLR----QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
LR Q+G+++G+ S EE ++ D+ + + + G+DL VS + + W E+
Sbjct: 126 LLRDQGAQNGAIVGLASGEEVTQARIDEAIAAAKAAPSMKGLDLAKVVSTDKSYPWTEA- 184
Query: 177 KPDWDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
+W + S ++V+AYDFG+K NILR LA GC + VVP+ PA + L L PD
Sbjct: 185 --EWTLGEGYGKLESPKFKVVAYDFGVKKNILRMLAERGCDVTVVPAQTPAKDVLALNPD 242
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GV SNGPGDP YA+A V+E++ K+PVFGIC+GHQ++ A G
Sbjct: 243 GVFLSNGPGDPEPCDYAIAAVQEIMAAKMPVFGICLGHQIMALASG 288
>gi|262369445|ref|ZP_06062773.1| carbamoylphosphate synthase small subunit [Acinetobacter johnsonii
SH046]
gi|262315513|gb|EEY96552.1| carbamoylphosphate synthase small subunit [Acinetobacter johnsonii
SH046]
Length = 380
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 183/287 (63%), Gaps = 25/287 (8%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG YL E N++ I D+DTR +TR
Sbjct: 65 CNEEDAESGRIHKVWANGLIIRDLPLLHSNFRSTQSLGEYLKEHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVES-------- 175
LR G+ G + E+ ++++ LE +RS+ + G+DL + FEW E
Sbjct: 125 LRDKGAQNGCILAGENITEEQALEKARSFGGLNGLDLAKECCDPTGFEWTEGSWVLGKGF 184
Query: 176 TKPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
T+P+ F+ V+AYD+G+K NILR LA GC++ VVP+ PA++ L L PDG
Sbjct: 185 TQPELKFH----------VVAYDYGVKTNILRMLADRGCKLTVVPAQTPAADVLALNPDG 234
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLG---KVPVFGICMGHQLLGQALG 279
V SNGPGDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 235 VFLSNGPGDPAACDYAIEAVKTIVEDARNLPVFGICLGHQILALASG 281
>gi|377821311|ref|YP_004977682.1| carbamoyl-phosphate synthase small subunit [Burkholderia sp. YI23]
gi|357936146|gb|AET89705.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp. YI23]
Length = 380
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 190/279 (68%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R +S GA G+ +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGQSIGAPGSTIGEVVFNTAITGYQEILTDPSYAQQIVTLTYPHIGNYG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R +TL +YL + ++ I +DTR +TR LR+
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRSEQTLADYLKAQGVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ LE++RS+ + G+DL VS ++P+EW T+ +W +
Sbjct: 128 KGAQNGCILAGSDDEAKA----LELARSFPGLAGMDLAKVVSTQKPYEW---TQTEWRLS 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ ++ + YRV+A+D+G+K NILR LA GC + V+P+ A++ L L PDGV SNG
Sbjct: 181 SGYGKQEAPKYRVVAFDYGVKFNILRMLAERGCHVTVLPAQATAADALALNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + +P FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATKEFIERGIPTFGICLGHQIMGLAVG 279
>gi|170768545|ref|ZP_02902998.1| carbamoyl-phosphate synthase, small subunit [Escherichia albertii
TW07627]
gi|170122649|gb|EDS91580.1| carbamoyl-phosphate synthase, small subunit [Escherichia albertii
TW07627]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ PA + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTPAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|153834494|ref|ZP_01987161.1| carbamoyl-phosphate synthase, small subunit [Vibrio harveyi HY01]
gi|148869130|gb|EDL68166.1| carbamoyl-phosphate synthase, small subunit [Vibrio harveyi HY01]
Length = 384
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 15/284 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQ---ELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + + S + + E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVADSSINGENLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WT 181
Query: 182 F-----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV
Sbjct: 182 LEGGLPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGV 241
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 FLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 285
>gi|330807471|ref|YP_004351933.1| carbamoyl-phosphate synthase small subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|378948795|ref|YP_005206283.1| protein CarA [Pseudomonas fluorescens F113]
gi|423695283|ref|ZP_17669773.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens Q8r1-96]
gi|327375579|gb|AEA66929.1| Carbamoyl-phosphate synthase (glutamine-hydrolyzing), small chain
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359758809|gb|AEV60888.1| CarA [Pseudomonas fluorescens F113]
gi|388009129|gb|EIK70380.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens Q8r1-96]
Length = 378
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K+ +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKKQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|421906263|ref|ZP_16336165.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
alpha704]
gi|393292669|emb|CCI72083.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
alpha704]
Length = 399
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|206559637|ref|YP_002230398.1| carbamoyl phosphate synthase small subunit [Burkholderia
cenocepacia J2315]
gi|421868911|ref|ZP_16300555.1| Carbamoyl-phosphate synthase small chain [Burkholderia cenocepacia
H111]
gi|444364383|ref|ZP_21164708.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
cenocepacia BC7]
gi|444369435|ref|ZP_21169187.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
cenocepacia K56-2Valvano]
gi|198035675|emb|CAR51562.1| carbamoyl-phosphate synthase small chain [Burkholderia cenocepacia
J2315]
gi|358071047|emb|CCE51433.1| Carbamoyl-phosphate synthase small chain [Burkholderia cenocepacia
H111]
gi|443593016|gb|ELT61778.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
cenocepacia BC7]
gi|443599081|gb|ELT67389.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
cenocepacia K56-2Valvano]
Length = 381
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 180/275 (65%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + T S + + +E++RS+ + G+DL VS +PFEW ++ + + +
Sbjct: 128 KGAQNGCILT-GSDDEAKAIELARSFPGLAGMDLAKVVSTTKPFEWKQTEWRLEGGYGMQ 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
E + YRV+AYDFG+K+NILR LA GC + V+P+ A + L L PDGV SNGPGDP
Sbjct: 187 E--APKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAEDALALNPDGVFLSNGPGDP 244
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+A K + + VP FGIC+GHQ++G A+G
Sbjct: 245 EPCDYAIAATKAFIERGVPTFGICLGHQIMGLAVG 279
>gi|260775357|ref|ZP_05884254.1| carbamoyl-phosphate synthase small chain [Vibrio coralliilyticus
ATCC BAA-450]
gi|260608538|gb|EEX34703.1| carbamoyl-phosphate synthase small chain [Vibrio coralliilyticus
ATCC BAA-450]
Length = 379
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGASVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAQDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLDKGLPIFGICLGHQILALASG 280
>gi|167587480|ref|ZP_02379868.1| carbamoyl-phosphate synthase, small subunit [Burkholderia ubonensis
Bu]
Length = 381
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 186/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGHSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL++R L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIVRDLPDLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + ST+E+K+ +E++RS+ + G+DL VS +PFEW ++ +W
Sbjct: 128 KGAQNGCILAGSTDEAKA----IELARSFPGLAGMDLAKVVSTAKPFEWKQT---EWKLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + YRV+AYDFG+K+NILR LA GC + V+P+ A+E L L PDGV SNG
Sbjct: 181 SGYGMQEAPKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAAEALALNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|417387898|ref|ZP_12152191.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
gi|353627730|gb|EHC75977.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Minnesota str. A4-603]
Length = 391
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPLFGICLGHQLLALASG 289
>gi|153871977|ref|ZP_02001002.1| carbamoyl-phosphate synthase small chain [Beggiatoa sp. PS]
gi|152071560|gb|EDN69001.1| carbamoyl-phosphate synthase small chain [Beggiatoa sp. PS]
Length = 375
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 176/281 (62%), Gaps = 15/281 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DGS++ +S G +G VGEVVFNT++TGYQEILTDPSY Q + +T PHIGN
Sbjct: 4 QALLALADGSLFNGESIGIAGQSVGEVVFNTAITGYQEILTDPSYCRQIITLTYPHIGNV 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES+ F AGLVIR L + SNWR E+L YL ++ I +DTR +TR LR
Sbjct: 64 GVNAEDEESKHIFAAGLVIRDLPLLDSNWRTEESLEAYLQRHQVVSIAGIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEW------VESTKPD 179
G+ G L E+ L+ ++++ + G+DL +VS ++ + W +E TKP
Sbjct: 124 DKGAQNGCLVAGENLDAVAALQAAKNFPGLQGMDLAKEVSTQQSYLWKKGAWSMEVTKPT 183
Query: 180 WDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ +IAYDFG+K NIL+ L GC + VVP+ PASE LK KPDGV S
Sbjct: 184 -------PPPSQWNIIAYDFGVKRNILQLLVERGCHVTVVPAQTPASEVLKEKPDGVFLS 236
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+ ++E++ K+P FGIC+GHQLLG A G
Sbjct: 237 NGPGDPEPCDYAIEAIQEIIAAKIPTFGICLGHQLLGLASG 277
>gi|421081790|ref|ZP_15542699.1| Carbamoyl-phosphate synthase small chain [Pectobacterium wasabiae
CFBP 3304]
gi|401703603|gb|EJS93817.1| Carbamoyl-phosphate synthase small chain [Pectobacterium wasabiae
CFBP 3304]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +DEES GLVIR L + SN+R E+L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAAVALEKAKAFPGLKGMDLAKEVTTAESYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GELPAAKNESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIRAIKTFLETDIPVFGICLGHQLLALASG 280
>gi|333925532|ref|YP_004499111.1| carbamoyl-phosphate synthase small subunit [Serratia sp. AS12]
gi|333930485|ref|YP_004504063.1| carbamoyl-phosphate synthase small subunit [Serratia plymuthica
AS9]
gi|386327356|ref|YP_006023526.1| carbamoyl-phosphate synthase small subunit [Serratia sp. AS13]
gi|333472092|gb|AEF43802.1| carbamoyl-phosphate synthase, small subunit [Serratia plymuthica
AS9]
gi|333489592|gb|AEF48754.1| carbamoyl-phosphate synthase, small subunit [Serratia sp. AS12]
gi|333959689|gb|AEG26462.1| carbamoyl-phosphate synthase, small subunit [Serratia sp. AS13]
Length = 382
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 173/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRSEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S L ++ + + G+DL +V+ KE + W + + W
Sbjct: 122 LREKGAQNGCIIAADSPDAALALAKAQGFPGLKGMDLAKEVTTKEAYSWQQGS---WTLE 178
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GELPEAKPASELPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPADEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKQFLETDIPVFGICLGHQLLALASG 280
>gi|421529074|ref|ZP_15975623.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida S11]
gi|402213463|gb|EJT84811.1| carbamoyl phosphate synthase small subunit [Pseudomonas putida S11]
Length = 324
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR ++L YL N++ I +DTR +TR LR+
Sbjct: 73 TTPEDAESNRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + +R++ + G+DL VS KE +EW S W+ T
Sbjct: 133 KGAQNGCILAGDNISEEAAIAAARAFPGLKGMDLAKVVSTKERYEWRSSV---WELKTDS 189
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+A+D+G+K NILR L + GC++ VVP+ PASE L L PDGV SNG
Sbjct: 190 HPTIEAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 249
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 250 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASG 288
>gi|418291253|ref|ZP_12903286.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM220]
gi|372200185|gb|EHP14304.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM220]
Length = 399
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 180/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + +GL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYASGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|416198787|ref|ZP_11619154.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
CU385]
gi|427826483|ref|ZP_18993533.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
H44/76]
gi|316985457|gb|EFV64404.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
H44/76]
gi|325139509|gb|EGC62049.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
CU385]
Length = 399
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 179/283 (63%), Gaps = 9/283 (3%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 DFNTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFL 257
Query: 239 SNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 258 SNGPGDPEPCTYAIKAVQKLIESGK-PIFGICLGHQLISLAIG 299
>gi|421543099|ref|ZP_15989196.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM255]
gi|389606548|emb|CCA45461.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
alpha522]
gi|402315305|gb|EJU50869.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM255]
Length = 377
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|325109215|ref|YP_004270283.1| carbamoyl-phosphate synthase small subunit [Planctomyces
brasiliensis DSM 5305]
gi|324969483|gb|ADY60261.1| carbamoyl-phosphate synthase small subunit [Planctomyces
brasiliensis DSM 5305]
Length = 386
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 174/278 (62%), Gaps = 6/278 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A+L L DG+++ SFGA G GEVVFNTS+TGYQEI+TDPSY GQ V+MT P IGN G
Sbjct: 5 AKLALSDGTVFTGISFGAEGESFGEVVFNTSMTGYQEIITDPSYCGQIVVMTYPQIGNYG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES + L G V R L SN+R +L +YL + +I+GI ++DTRA+ RRLRQ
Sbjct: 65 INPEDVESSRPALKGFVCRELCEVPSNYRATHSLSDYLKQHDIVGISEIDTRALVRRLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVES------TKPDWD 181
G + GVLST + + + S ++VG D + V E EW E T +
Sbjct: 125 HGVMTGVLSTVDLDDASLIAKAQSSPELVGQDFVKQVMPSENAEWSECLAELSLTPVNRP 184
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ +SK R++A D+G+K NI R LA+ GC + VVP T A E L +PDG+ SNG
Sbjct: 185 RRVVDESSKRPRIVAIDYGMKWNIPRHLAATGCDVTVVPGTATAEEILAHEPDGIFLSNG 244
Query: 242 PGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP + YAV ++ LLGK P+FGIC+G QLLG A G
Sbjct: 245 PGDPRPLTYAVETIQNLLGKKPIFGICLGVQLLGLAFG 282
>gi|390950110|ref|YP_006413869.1| carbamoyl-phosphate synthase small subunit [Thiocystis violascens
DSM 198]
gi|390426679|gb|AFL73744.1| carbamoyl-phosphate synthase, small subunit [Thiocystis violascens
DSM 198]
Length = 381
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R S GA GT VGEVVFNT+++GYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 AVLVLEDGSVFRGTSIGADGTSVGEVVFNTAMSGYQEILTDPSYLRQLVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES AGL++R L I SN+R E L YL + ++GI D+DTR +TR LR+
Sbjct: 65 ANPEDEESGAIQAAGLIVRDLPILPSNYRLRERLDAYLIRQGVVGIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST------KPDW 180
G+ G L ++ + L +R++ + G+DL S KE + W + P+
Sbjct: 125 KGAQNGCLQAGDALDEAAALAEARAFPGLKGMDLAQHASTKEAYPWTQGVWTLDGGLPEP 184
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
ER Y V+AYD+GIK NILR L + GC + VVP+ PA+ L L+PDGV SN
Sbjct: 185 LMPVGER--LPYHVVAYDYGIKRNILRMLVARGCHVTVVPAHMPAATVLALQPDGVFLSN 242
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+ ++ELL +P+FGIC+GHQLLG A G
Sbjct: 243 GPGDPEPCDYAITAIRELLDTDIPLFGICLGHQLLGLACG 282
>gi|264679351|ref|YP_003279258.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
CNB-2]
gi|262209864|gb|ACY33962.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
CNB-2]
Length = 390
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/286 (46%), Positives = 184/286 (64%), Gaps = 13/286 (4%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N +A L L DG+++ S GA GT VGEVVFNTSLTGYQEILTDPSY Q V +T PHI
Sbjct: 8 NFPSAILALADGTVFIGNSIGAQGTTVGEVVFNTSLTGYQEILTDPSYCQQIVTLTYPHI 67
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVN +D E+ + AGL+I++L + SN+R +TL YL E + I ++DTR +TR
Sbjct: 68 GNYGVNPEDVEADKIHAAGLIIKNLPLLASNFRSTQTLSEYLTEGKTVAIANIDTRKLTR 127
Query: 124 RLR----QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
LR Q+G+++G+ + EE ++ D+ + + + G+DL VS + + W E+
Sbjct: 128 LLRDQGAQNGAIVGLAAGEEVTQARIDEAIAAAKAAPSMKGLDLAKVVSTDKSYPWTEA- 186
Query: 177 KPDWDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
+W + S ++V+AYDFG+K NILR LA GC + VVP+ PA + L L PD
Sbjct: 187 --EWTLGEGYGKLESPKFKVVAYDFGVKKNILRMLAERGCDVTVVPAQTPAKDVLALNPD 244
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GV SNGPGDP+ YA+A V+E++ K+PVFGIC+GHQ++ A G
Sbjct: 245 GVFLSNGPGDPAPCDYAIAAVQEIMAAKMPVFGICLGHQIMALASG 290
>gi|332140820|ref|YP_004426558.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'Deep ecotype']
gi|327550842|gb|AEA97560.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'Deep ecotype']
Length = 376
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 181/277 (65%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GA+G+ VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGATGSAVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D E+ + + GL+IR L + SN+R +TL YL + ++GI D+DTR +TR LR
Sbjct: 64 GTNEEDVEADKIWSKGLIIRDLPLVASNFRQQQTLSEYLKAKGVVGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
G+ G + + + L ++ + + G+DL VS EP W E + W+
Sbjct: 124 DKGAQNGCIICSDELDESSALAQAKDFPGLKGMDLAKVVSITEPKTWTEGS---WELGKG 180
Query: 185 HERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ S+T Y V+AYD+G+K+NILR LA GC+I +VP+ PA E L L PDGV SNGPG
Sbjct: 181 YVTPSETKYHVVAYDYGVKNNILRMLADRGCKITLVPAQTPAEEVLALNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+ +K ++ VPVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAITAIKTIVETGVPVFGICLGHQLLAIASG 277
>gi|218767569|ref|YP_002342081.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
Z2491]
gi|385851939|ref|YP_005898454.1| carbamoyl-phosphate synthase small subunit [Neisseria meningitidis
M04-240196]
gi|416184796|ref|ZP_11613113.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M13399]
gi|421541150|ref|ZP_15987280.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
93004]
gi|421561873|ref|ZP_16007710.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM2657]
gi|433522918|ref|ZP_20479596.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
61103]
gi|433537339|ref|ZP_20493835.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
77221]
gi|21759053|sp|Q9JVZ6.1|CARA_NEIMA RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|121051577|emb|CAM07875.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
Z2491]
gi|254669609|emb|CBA03637.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
alpha153]
gi|325133496|gb|EGC56159.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M13399]
gi|325206762|gb|ADZ02215.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M04-240196]
gi|402315943|gb|EJU51497.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
93004]
gi|402336258|gb|EJU71519.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM2657]
gi|432257070|gb|ELL12376.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
61103]
gi|432271762|gb|ELL26884.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
77221]
Length = 377
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|322435195|ref|YP_004217407.1| carbamoyl-phosphate synthase small subunit [Granulicella tundricola
MP5ACTX9]
gi|321162922|gb|ADW68627.1| carbamoyl-phosphate synthase, small subunit [Granulicella
tundricola MP5ACTX9]
Length = 380
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 178/280 (63%), Gaps = 9/280 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I+R K +GA+ GEVVFNTSLTGYQEI TDPSYAGQ V++TNPHIGN G
Sbjct: 3 AVLALEDGRIFRGKGYGAATECSGEVVFNTSLTGYQEIFTDPSYAGQIVVLTNPHIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D ES + + GL++R S +SNWR E YL I I +VDTRA+ R LR
Sbjct: 63 TTPHDAESAKPMIEGLIVREFSPMSSNWRSTEVADEYLERNGIPVIGEVDTRAVVRHLRA 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRS-WDIVGIDLISDVSGKEPFEWVESTKP------DW 180
+G + GV+++ ES + L+ +++ + G DL S V+ K +EW ST+P W
Sbjct: 123 NGVMRGVIASGESLDEAALVAKAKAIRKMDGNDLASVVTTKVIYEW-SSTEPKNQTGDKW 181
Query: 181 -DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
++S V+AYDFGIK NILR L GC++ VVP+ A + + LKPDG+ FS
Sbjct: 182 LPAEDSAKDSDEMHVVAYDFGIKDNILRMLTREGCRVTVVPARTSAEDVMALKPDGIFFS 241
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDP + YA+ V++L G+ P+FGIC+GHQ+ G ALG
Sbjct: 242 NGPGDPEPLDYAIENVQKLKGQAPLFGICLGHQIFGLALG 281
>gi|336248679|ref|YP_004592389.1| carbamoyl phosphate synthase small subunit [Enterobacter aerogenes
KCTC 2190]
gi|334734735|gb|AEG97110.1| carbamoyl phosphate synthase small subunit [Enterobacter aerogenes
KCTC 2190]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNLDAQLALEKAQAFPGLNGMDLAKEVTTAETYAWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ +VP+ A + LKL PDG+
Sbjct: 179 GDLPEAKAESDLPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIAAIEKFLTTDIPVFGICLGHQLLALASG 280
>gi|331681415|ref|ZP_08382052.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H299]
gi|450184906|ref|ZP_21888816.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SEPT362]
gi|331081636|gb|EGI52797.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H299]
gi|449325636|gb|EMD15539.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SEPT362]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|204926747|ref|ZP_03217949.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|416508707|ref|ZP_11736154.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|416522727|ref|ZP_11740615.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|416526213|ref|ZP_11742267.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|416533345|ref|ZP_11746313.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|416555374|ref|ZP_11758859.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|416564718|ref|ZP_11763442.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|416572492|ref|ZP_11767237.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
gi|417448223|ref|ZP_12162586.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|204323412|gb|EDZ08607.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|353638014|gb|EHC83680.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Montevideo str. S5-403]
gi|363551165|gb|EHL35484.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. ATCC BAA710]
gi|363551997|gb|EHL36304.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB31]
gi|363558278|gb|EHL42471.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. LQC 10]
gi|363560191|gb|EHL44338.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 29N]
gi|363568629|gb|EHL52607.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. SARB30]
gi|363570065|gb|EHL54003.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 42N]
gi|363573044|gb|EHL56931.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Montevideo str. 4441 H]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPLFGICLGHQLLALASG 280
>gi|444353187|ref|YP_007389331.1| Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) [Enterobacter
aerogenes EA1509E]
gi|443904017|emb|CCG31791.1| Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) [Enterobacter
aerogenes EA1509E]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNLDAQLALEKAQAFPGLNGMDLAKEVTTAETYAWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ +VP+ A + LKL PDG+
Sbjct: 179 GDLPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIAAIEKFLTTDIPVFGICLGHQLLALASG 280
>gi|300948635|ref|ZP_07162719.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
116-1]
gi|300956961|ref|ZP_07169213.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
175-1]
gi|331650923|ref|ZP_08351951.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli M718]
gi|300316251|gb|EFJ66035.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
175-1]
gi|300451861|gb|EFK15481.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
116-1]
gi|331051377|gb|EGI23426.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli M718]
Length = 391
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|83644089|ref|YP_432524.1| carbamoyl phosphate synthase small subunit [Hahella chejuensis KCTC
2396]
gi|83632132|gb|ABC28099.1| Carbamoylphosphate synthase small subunit [Hahella chejuensis KCTC
2396]
Length = 381
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 176/276 (63%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+ S GA+G GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 7 AILALEDGSIFHGISIGAAGETTGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES Q + AGLVIR LS+ SNWR ++L +YL E I+ I D+DTR +TR LR+
Sbjct: 67 TNEEDVESDQVWAAGLVIRDLSMTVSNWRSQKSLSDYLRENGIVAIADIDTRRLTRILRE 126
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G +++ E++ ++ L + G+DL +V+ + W EST W
Sbjct: 127 KGAQNGCIMAGEDASAEAALAAAKAFPGLKGMDLAKEVTRTDVLNWTEST---WVLGEGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ V+AYDFG+K NILR LA GC++ VVP+ PA + L + PDGV SNGPGD
Sbjct: 184 QTLGDAEFHVVAYDFGVKKNILRMLAERGCRVTVVPAKTPAKDVLAMSPDGVFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ + E+L + PVFGIC+GHQLL A G
Sbjct: 244 PEPCDYAIEAIAEVLKSQTPVFGICLGHQLLALASG 279
>gi|421563939|ref|ZP_16009751.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM2795]
gi|421566228|ref|ZP_16011984.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3081]
gi|402339558|gb|EJU74772.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM2795]
gi|402340837|gb|EJU76028.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3081]
Length = 377
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|385341302|ref|YP_005895173.1| carbamoyl-phosphate synthase small subunit [Neisseria meningitidis
M01-240149]
gi|385856599|ref|YP_005903111.1| carbamoyl-phosphate synthase small subunit [Neisseria meningitidis
NZ-05/33]
gi|325201508|gb|ADY96962.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M01-240149]
gi|325207488|gb|ADZ02940.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NZ-05/33]
Length = 377
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|304414252|ref|ZP_07395620.1| carbamoyl-phosphate synthase small subunit [Candidatus Regiella
insecticola LSR1]
gi|304283466|gb|EFL91862.1| carbamoyl-phosphate synthase small subunit [Candidatus Regiella
insecticola LSR1]
Length = 401
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 181/284 (63%), Gaps = 12/284 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 13 IKSALLVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 72
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTG N DEES + GL+IR L + TS++R E+L YL +++ I D+DTR +TR
Sbjct: 73 NTGTNSIDEESGAVQVQGLIIRDLPLMTSSYRSEESLSQYLKRHHVVAIADIDTRQLTRL 132
Query: 125 LRQDGSLIGVLSTEESKSD--QELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
LR G+ G + T + LE ++ + +VG+DL +VS K + W++ W
Sbjct: 133 LRDKGAQNGCIITGQPSPALLASALEKAQQFPGLVGMDLAKEVSTKAAYPWLQG---KWT 189
Query: 182 FNT---HERNSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ H N+ + V+ YD+G+KHNILR L GC++ VVP+ PA + LKL PDGV
Sbjct: 190 LDNERPHACNTADLPFHVVVYDYGVKHNILRLLVEQGCRLTVVPAQTPAEDVLKLNPDGV 249
Query: 237 LFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ ++ LL K+P+FGIC+GHQLL A G
Sbjct: 250 FLSNGPGDPAPCDYAIRAIQRLLETKIPLFGICLGHQLLALASG 293
>gi|401677486|ref|ZP_10809461.1| carbamoyl phosphate synthase small subunit [Enterobacter sp. SST3]
gi|400215334|gb|EJO46245.1| carbamoyl phosphate synthase small subunit [Enterobacter sp. SST3]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 180/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDF 182
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W + + + D
Sbjct: 122 LREKGAQNGCIIAGDNLDTTLALEKAKAFPGLNGMDLAKEVTTAEAYSWTQGSWTLEGDL 181
Query: 183 NTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++ S+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKKESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIAAIKSFLETDIPVFGICLGHQLLALASG 280
>gi|227358195|ref|ZP_03842536.1| carbamoyl-phosphate synthase small chain [Proteus mirabilis ATCC
29906]
gi|227161531|gb|EEI46568.1| carbamoyl-phosphate synthase small chain [Proteus mirabilis ATCC
29906]
Length = 396
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 174/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSAILVLEDGTEFHGRSIGAEGAAIGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTGVN DEES GL+IR L + SN+R E+L +YL I+ I D+DTR +TR
Sbjct: 71 NTGVNSSDEESATIHAQGLIIRDLPLVMSNYRAEESLADYLKRHQIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL V+ K+P++W T+ W
Sbjct: 131 LREKGAQNGCIIAGTHLDAKQALEKAKAFPGLKGMDLAKTVTVKQPYQW---TQGSWTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T V+AYDFG+K NILR L GC++ VVP+ A E L L PDG+
Sbjct: 188 GELPATQSPQDLPLHVVAYDFGVKRNILRMLVDRGCRVTVVPAQTSAQEVLALSPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ AI L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPEPCDYAIDAIQTFLTTDIPVFGICLGHQLLALASG 289
>gi|456735747|gb|EMF60473.1| Carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia EPM1]
Length = 375
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 184 VPAKYKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 244 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 276
>gi|308094339|ref|ZP_05888566.2| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus AN-5034]
gi|308095406|ref|ZP_05905661.2| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus Peru-466]
gi|308126035|ref|ZP_05778765.2| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus K5030]
gi|308126505|ref|ZP_05910603.2| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus AQ4037]
gi|308087978|gb|EFO37673.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus Peru-466]
gi|308092951|gb|EFO42646.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus AN-5034]
gi|308108477|gb|EFO46017.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus AQ4037]
gi|308114737|gb|EFO52277.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus K5030]
Length = 411
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 176/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 37 ALLVLEDGTVFRGVSIGADGVSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 96
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 97 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 156
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W +
Sbjct: 157 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLESGL 213
Query: 187 RNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 214 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 273
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 274 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 312
>gi|270263911|ref|ZP_06192179.1| carbamoyl-phosphate synthase small chain [Serratia odorifera 4Rx13]
gi|270042104|gb|EFA15200.1| carbamoyl-phosphate synthase small chain [Serratia odorifera 4Rx13]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 173/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRSEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S L ++ + + G+DL +V+ KE + W + + W
Sbjct: 122 LREKGAQNGCIIAADSPDAALALAKAQGFPGLKGMDLAKEVTTKEAYSWQQGS---WTLE 178
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GDLPEAKPASELPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPADEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKQFLETDIPVFGICLGHQLLALASG 280
>gi|253988042|ref|YP_003039398.1| carbamoyl-phosphate synthase small chain [Photorhabdus asymbiotica]
gi|253779492|emb|CAQ82653.1| carbamoyl-phosphate synthase small chain [Photorhabdus asymbiotica]
Length = 387
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 180/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D+ES + GLVIR L + TSN+R ETL +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNSVDKESLKVQAQGLVIRDLPLLTSNFRSEETLSDYLKRHNIVAIADIDTRKLTRW 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ GS G + + LE ++++ + G+DL +V+ ++ + W++ + D
Sbjct: 122 LREKGSQNGCIIAGRQIDAEVALEKAKAFPGLQGMDLAREVTTEQTYPWLQGSWTLADGL 181
Query: 184 THERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E+ + Y V+AYDFG K NILR L GC++ VVP+ PA + LKL PDG+ SNG
Sbjct: 182 PEEKQEQDLLYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K LL +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCGYAIEAIKTLLETDIPIFGICLGHQLLALASG 280
>gi|86147367|ref|ZP_01065680.1| carbamoyl-phosphate synthase small subunit [Vibrio sp. MED222]
gi|85834795|gb|EAQ52940.1| carbamoyl-phosphate synthase small subunit [Vibrio sp. MED222]
Length = 390
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 181/285 (63%), Gaps = 15/285 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGEAIGAVGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNVIGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSD---QELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDW 180
+ G+ G + S +D E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGSSVNDGNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---W 180
Query: 181 DFNTHERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDG
Sbjct: 181 TLTGGLPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDG 240
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 VFLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 285
>gi|416174321|ref|ZP_11609155.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
OX99.30304]
gi|325129507|gb|EGC52334.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
OX99.30304]
Length = 377
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|421545169|ref|ZP_15991233.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM140]
gi|421559890|ref|ZP_16005757.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
92045]
gi|421568346|ref|ZP_16014071.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3001]
gi|433509981|ref|ZP_20466838.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
12888]
gi|402321246|gb|EJU56721.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM140]
gi|402334456|gb|EJU69744.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
92045]
gi|402341516|gb|EJU76690.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM3001]
gi|432244919|gb|ELL00398.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
12888]
Length = 377
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + +GL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYASGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|421555571|ref|ZP_16001498.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
98008]
gi|402329031|gb|EJU64393.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
98008]
Length = 377
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + +GL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYASGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|431926141|ref|YP_007239175.1| carbamoyl-phosphate synthase small subunit [Pseudomonas stutzeri
RCH2]
gi|431824428|gb|AGA85545.1| carbamoyl-phosphate synthase small subunit [Pseudomonas stutzeri
RCH2]
Length = 382
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 181/276 (65%), Gaps = 4/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR + L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLISSNWRDKQPLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S D E
Sbjct: 129 KGAQNGCILAGSDATEEKALELARSFPGLKGMDLAKEVSVKERYEWRSSVWCLKDDGHAE 188
Query: 187 --RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPGD
Sbjct: 189 IPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPGD 248
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 249 PEPCDYAIKAIQEVLETDIPVFGICLGHQLLALASG 284
>gi|398951744|ref|ZP_10674279.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM33]
gi|426407606|ref|YP_007027705.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. UW4]
gi|398156032|gb|EJM44458.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM33]
gi|426265823|gb|AFY17900.1| carbamoyl phosphate synthase small subunit [Pseudomonas sp. UW4]
Length = 378
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESNRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K+ +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKDSYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIDASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|398855334|ref|ZP_10611830.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM80]
gi|399014414|ref|ZP_10716705.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM16]
gi|398110979|gb|EJM00871.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM16]
gi|398232019|gb|EJN17998.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM80]
Length = 378
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKTQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIDASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 280
>gi|15677684|ref|NP_274845.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
MC58]
gi|385853903|ref|YP_005900417.1| carbamoyl-phosphate synthase small subunit [Neisseria meningitidis
H44/76]
gi|433465830|ref|ZP_20423300.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM422]
gi|433489025|ref|ZP_20446174.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M13255]
gi|433491203|ref|ZP_20448315.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM418]
gi|433505756|ref|ZP_20462687.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
9506]
gi|433507837|ref|ZP_20464734.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
9757]
gi|433512067|ref|ZP_20468881.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
4119]
gi|21759054|sp|Q9JXX4.1|CARA_NEIMB RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|7227105|gb|AAF42183.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
MC58]
gi|325200907|gb|ADY96362.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
H44/76]
gi|432200527|gb|ELK56617.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM422]
gi|432221021|gb|ELK76836.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
M13255]
gi|432225337|gb|ELK81080.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
NM418]
gi|432239241|gb|ELK94799.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
9506]
gi|432239308|gb|ELK94864.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
9757]
gi|432245224|gb|ELL00695.1| carbamoyl-phosphate synthase, small subunit [Neisseria meningitidis
4119]
Length = 377
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIKAVQKLIESGK-PIFGICLGHQLISLAIG 277
>gi|123968442|ref|YP_001009300.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. AS9601]
gi|123198552|gb|ABM70193.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. AS9601]
Length = 379
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G ++ FGASGT VGE+VFNT +TGYQE++TDPSY GQ + T P IGNT
Sbjct: 8 NAKLVLSNGIVFPGFFFGASGTAVGEIVFNTGMTGYQEVITDPSYYGQILTFTYPEIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+NF+D ES + G+++R+ S SNWR + +L E+NI+G+Y +DTRA+ + LR
Sbjct: 68 GINFEDSES-NINIKGIIVRNFSSNNSNWRSKKNFNQWLVEKNIIGLYGIDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
G++ GV+++ + + L + + + G++L VS K+ + W T+ +D +
Sbjct: 127 STGAMNGVITSLDKTDESCLKIIQDTPKMEGLNLSKVVSTKQQYLWNSHTQTVFDLRKRY 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ +SK +++A DFGIK++IL RL S+GC+++V+PS ++ L KPDG+ FSNGPGDP
Sbjct: 187 DESSKKLKIVAIDFGIKNSILNRLVSHGCEVLVLPSRSSLNDVLSNKPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S V + + K L+ G++P+FGIC+GHQ+ G ALG
Sbjct: 247 STVSEGIDLAKSLIEYGEIPMFGICLGHQIFGLALG 282
>gi|410861139|ref|YP_006976373.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
AltDE1]
gi|410818401|gb|AFV85018.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
AltDE1]
Length = 376
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 181/277 (65%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GA+G+ VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGATGSAVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D E+ + + GL+IR L + SN+R +TL YL + ++GI D+DTR +TR LR
Sbjct: 64 GTNEEDVEADKIWSKGLIIRDLPLVASNFRQQQTLSEYLKAKGVVGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
G+ G + + + L ++ + + G+DL VS EP W E + W+
Sbjct: 124 DKGAQNGCIICSDELDESSALAQAKDFPGLKGMDLAKVVSITEPKTWTEGS---WELGKG 180
Query: 185 HERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ S+T Y V+AYD+G+K+NILR LA GC+I +VP+ PA E L L PDGV SNGPG
Sbjct: 181 YVTPSETKYHVVAYDYGVKNNILRMLADRGCKITLVPAQTPAEEVLALNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+ +K ++ +PVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAITAIKTIVETGIPVFGICLGHQLLAIASG 277
>gi|444424597|ref|ZP_21220052.1| carbamoyl phosphate synthase small subunit [Vibrio campbellii CAIM
519 = NBRC 15631]
gi|444242089|gb|ELU53605.1| carbamoyl phosphate synthase small subunit [Vibrio campbellii CAIM
519 = NBRC 15631]
Length = 379
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNNPDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|218708497|ref|YP_002416118.1| carbamoyl phosphate synthase small subunit [Vibrio splendidus
LGP32]
gi|407069998|ref|ZP_11100836.1| carbamoyl phosphate synthase small subunit [Vibrio cyclitrophicus
ZF14]
gi|218321516|emb|CAV17468.1| Carbamoyl-phosphate synthase, small subunit [Vibrio splendidus
LGP32]
Length = 384
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 181/285 (63%), Gaps = 15/285 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGEAIGAVGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSD---QELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDW 180
+ G+ G + S +D E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGSSVNDGNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---W 180
Query: 181 DFNTHERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDG
Sbjct: 181 TLTGGLPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDG 240
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 VFLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 285
>gi|268596087|ref|ZP_06130254.1| carbamoylphosphate synthase small subunit [Neisseria gonorrhoeae
FA19]
gi|268549875|gb|EEZ44894.1| carbamoylphosphate synthase small subunit [Neisseria gonorrhoeae
FA19]
Length = 377
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 182/279 (65%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D+ESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDKESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+ F
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGP
Sbjct: 182 VTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 240 GDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|145589202|ref|YP_001155799.1| carbamoyl-phosphate synthase small subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|226700916|sp|A4SXM1.1|CARA_POLSQ RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|145047608|gb|ABP34235.1| carbamoyl-phosphate synthase small subunit [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 397
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/288 (46%), Positives = 177/288 (61%), Gaps = 19/288 (6%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+ S GA G GEVVFNT+LTGYQEI+TDPSY Q V +T PHIGN G
Sbjct: 11 AVLALADGSIFHGFSIGAPGETTGEVVFNTALTGYQEIITDPSYCSQIVTLTYPHIGNVG 70
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN D ES + AGLVI+ L SN+R L YL E ++GI +DTR +TR LR
Sbjct: 71 VNAQDAESDRIHAAGLVIKDLPKRVSNFRSEAPLDAYLTEAGVVGIAGIDTRKLTRILRD 130
Query: 128 DGSLIGVLSTEESKSDQEL-----LEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + ++ D E LE+ +++ + G+DL V+ K+P+EW E +WD
Sbjct: 131 KGAQSGAIVAGKAGDDYETLGKKALELVKAFPGMAGLDLAKVVTTKKPYEWREG---EWD 187
Query: 182 ---------FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLK 232
+ T + + TY+V+AYDFG+K NILR L GC++ VVP+ A+E L ++
Sbjct: 188 LHGPNGTPAYRTLDTSKPTYKVVAYDFGVKRNILRMLTERGCELTVVPAQTSAAEVLAMQ 247
Query: 233 PDGVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PDGV SNGPGDP YA+A KE++ VP FGIC+GHQ++G A G
Sbjct: 248 PDGVFLSNGPGDPEPCDYAIAAAKEIIEAGVPTFGICLGHQIMGLAAG 295
>gi|84393221|ref|ZP_00991983.1| carbamoyl-phosphate synthase small subunit [Vibrio splendidus
12B01]
gi|84376127|gb|EAP93013.1| carbamoyl-phosphate synthase small subunit [Vibrio splendidus
12B01]
Length = 384
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 181/285 (63%), Gaps = 15/285 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGEAIGAVGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSD---QELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDW 180
+ G+ G + S +D E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGSSVNDGNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---W 180
Query: 181 DFNTHERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDG
Sbjct: 181 TLTGGLPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDG 240
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 VFLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 285
>gi|422016410|ref|ZP_16362994.1| carbamoyl phosphate synthase small subunit [Providencia
burhodogranariea DSM 19968]
gi|414093768|gb|EKT55439.1| carbamoyl phosphate synthase small subunit [Providencia
burhodogranariea DSM 19968]
Length = 387
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 174/279 (62%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G +GEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTEFHGRAIGAEGAAIGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES + GL+IR L + SN+R E L YL N++ I D+DTR +TR
Sbjct: 62 NVGANADDEESPEVHAQGLIIRDLPLVYSNFRGQEGLSEYLKRHNVVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + ++ LE +R++ + G+DL +V KE + W + T D
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFSGLNGLDLAKEVCTKEAYSWTQGSWTLHDGQ 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ V+AYDFG K NILR L GC++ VVP+T PA L + PDGV SNG
Sbjct: 182 LGAKNADELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +++ L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIKAIQDFLETEIPVFGICLGHQLLALASG 280
>gi|379699285|ref|YP_005241013.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
gi|323128384|gb|ADX15814.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. ST4/74]
Length = 391
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNKADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 289
>gi|268600557|ref|ZP_06134724.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
PID18]
gi|291044637|ref|ZP_06570346.1| carbamoyl-phosphate synthase small subunit [Neisseria gonorrhoeae
DGI2]
gi|268584688|gb|EEZ49364.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
PID18]
gi|291011531|gb|EFE03527.1| carbamoyl-phosphate synthase small subunit [Neisseria gonorrhoeae
DGI2]
Length = 399
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 27 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNAG 86
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 87 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 146
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+ F
Sbjct: 147 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 203
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGP
Sbjct: 204 VTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGP 261
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 262 GDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|398983403|ref|ZP_10690012.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM24]
gi|398157304|gb|EJM45700.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM24]
Length = 386
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 13 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 73 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K +EW + WD T
Sbjct: 133 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKTQYEWRSTV---WDLKTDS 189
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 190 HATIDASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 249
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L ++PVFGIC+GHQLL A G
Sbjct: 250 PGDPEPCDYAIKAIKEVLETEIPVFGICLGHQLLALASG 288
>gi|190574172|ref|YP_001972017.1| carbamoyl phosphate synthase small subunit [Stenotrophomonas
maltophilia K279a]
gi|190012094|emb|CAQ45716.1| putative carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia K279a]
Length = 393
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 23 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 82
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 83 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 142
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 143 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 201
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 202 VPAKYKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 261
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 262 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 294
>gi|171318238|ref|ZP_02907401.1| carbamoyl-phosphate synthase, small subunit [Burkholderia ambifaria
MEX-5]
gi|171096582|gb|EDT41476.1| carbamoyl-phosphate synthase, small subunit [Burkholderia ambifaria
MEX-5]
Length = 381
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 185/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS +PFEW ++ +W
Sbjct: 128 KGAQNGCILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLE 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + S YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNG
Sbjct: 181 SGYGMQESPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|386022064|ref|YP_005940089.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
DSM 4166]
gi|327482037|gb|AEA85347.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
DSM 4166]
Length = 382
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 183/279 (65%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLISSNWRNKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--NT 184
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S W +
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKERYEWRSSV---WCLKDDA 185
Query: 185 HER---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H + Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NG
Sbjct: 186 HAEIPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 246 PGDPEPCDYAIKAIQQVLETDIPVFGICLGHQLLALASG 284
>gi|148979737|ref|ZP_01815674.1| carbamoyl-phosphate synthase small subunit [Vibrionales bacterium
SWAT-3]
gi|145961620|gb|EDK26919.1| carbamoyl-phosphate synthase small subunit [Vibrionales bacterium
SWAT-3]
Length = 384
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/285 (46%), Positives = 181/285 (63%), Gaps = 15/285 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGEAIGAVGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSD---QELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDW 180
+ G+ G + S +D E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGSSVNDGNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---W 180
Query: 181 DFNTHERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDG
Sbjct: 181 TLTGGLPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDG 240
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
V SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 VFLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 285
>gi|329118074|ref|ZP_08246786.1| carbamoyl-phosphate synthase, small subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327465734|gb|EGF12007.1| carbamoyl-phosphate synthase, small subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 377
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 180/279 (64%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ +S G GT GEVVFNTS+TGYQEILTDPSY Q V +T PH+GNTG
Sbjct: 5 ALLVLADGSVFYGRSVGYQGTTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHVGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D E + + AGLVIR + I S++R E+L YL + I +DTR +TR LR
Sbjct: 65 TNSEDIEGKTVYAAGLVIRDIPILPSSFRSEESLQEYLIRNKTVAIAGIDTRRLTRVLRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW----DF 182
G+ G + T E ++ + E+ ++ +VG DL +V+ +P+EW E +W F
Sbjct: 125 KGAQAGAILTGEDATEAKARELIDAFGSMVGKDLAKEVTCGQPYEWTEG---EWVLGKGF 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T E + Y V+AYD+G+K NILR LAS GC++ VVP+ A + L + PDG+ SNGP
Sbjct: 182 VTPE--VQPYHVVAYDYGVKTNILRMLASRGCRLTVVPAQTLAKDVLAMNPDGIFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YAVA VKELL GK P+FGIC+GHQL+G ALG
Sbjct: 240 GDPEVCDYAVAAVKELLACGK-PIFGICLGHQLIGLALG 277
>gi|238026777|ref|YP_002911008.1| carbamoyl phosphate synthase small subunit [Burkholderia glumae
BGR1]
gi|237875971|gb|ACR28304.1| Carbamoylphosphate synthase small subunit [Burkholderia glumae
BGR1]
Length = 380
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 181/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGATGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 68 VNREDVEATKVHAAGLIIRDLPVLASNFRMDRTLDAYLRDEGVVAIAGIDTRKLTRVLRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--T 184
G+ G + T + + + +E++RS+ + G+DL VS +PF W ++ +W
Sbjct: 128 KGAQNGCILT-GADDEAKAIELARSFPGLAGMDLAKVVSTDKPFAWKQT---EWRLEGGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E+ + Y+V+AYDFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GEQTAPRYKVVAYDFGVKYNILRMLAERGCDVTVLPAQTSAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + VP FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATREFIARGVPTFGICLGHQIMGLAVG 279
>gi|407699595|ref|YP_006824382.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'Black Sea 11']
gi|407248742|gb|AFT77927.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'Black Sea 11']
Length = 376
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 182/277 (65%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GA+G+ VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGATGSAVGEVVFNTSMTGYQEILTDPSYAEQLITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D E+ + + GL+IR L + SN+R +TL YL + ++GI D+DTR +TR LR
Sbjct: 64 GTNEEDVEADKIWSKGLIIRDLPLVASNFRQQQTLSEYLKAKGVVGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
G+ G + + + L ++++ + G+DL VS EP W E + W+
Sbjct: 124 DKGAQNGCIICSDELDESSALAQAKAFPGLKGMDLAKVVSITEPKTWTEGS---WELGKG 180
Query: 185 HERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ S+T Y V+AYD+G+K+NILR LA GC++ +VP+ PA + L + PDGV SNGPG
Sbjct: 181 YVTPSETKYHVVAYDYGVKNNILRMLADRGCKVTLVPAQTPAEDVLAMNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YAV +K ++ VPVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAVTAIKTIVDTGVPVFGICLGHQLLAIASG 277
>gi|82701612|ref|YP_411178.1| carbamoyl-phosphate synthase, small subunit [Nitrosospira
multiformis ATCC 25196]
gi|82409677|gb|ABB73786.1| carbamoyl-phosphate synthase small subunit [Nitrosospira
multiformis ATCC 25196]
Length = 383
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 176/280 (62%), Gaps = 13/280 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 7 AVLALADGTVFRGMSIGAEGISTGEVVFNTSMTGYQEILTDPSYCRQIVTLTYPHIGNTG 66
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N DD ES + + AGLVIR L + +SNWR +TL YL ++ ++ I D+DTR +TR
Sbjct: 67 TNPDDVESGNIDRVYAAGLVIRDLPLASSNWRETQTLPEYLRQQGVVAIADIDTRKLTRI 126
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST---KPDW 180
LR+ G+ G + + + E L+++R + + G+DL VS +P+EW E +
Sbjct: 127 LREKGAQAGCIIAGQP-DETEALKLAREFPGLAGMDLAKVVSCLQPYEWNEGEWRLGQGY 185
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+H R + V A DFGIK NILR+LA GCQI V P+ A E L +PDG+ SN
Sbjct: 186 PVQSHPR----FHVAAMDFGIKRNILRKLAQRGCQITVFPAQTTADEILASQPDGIFLSN 241
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + LL K +PVFG+CMGHQLLG A G
Sbjct: 242 GPGDPEPCDYAIETTRRLLEKEIPVFGVCMGHQLLGLATG 281
>gi|423093460|ref|ZP_17081256.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens Q2-87]
gi|397887415|gb|EJL03898.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens Q2-87]
Length = 378
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K+ +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKKQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA + L LKPDGV SNG
Sbjct: 182 HATIEASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAVDVLALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|152980732|ref|YP_001353933.1| carbamoylphosphate synthase small subunit [Janthinobacterium sp.
Marseille]
gi|151280809|gb|ABR89219.1| carbamoylphosphate synthase small subunit [Janthinobacterium sp.
Marseille]
Length = 384
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 183/276 (66%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI++ S GA G +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 12 AILALADGSIFKGFSIGAPGHTIGEVVFNTSMTGYQEILTDPSYSNQIVTLTYPHIGNTG 71
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGL+I+ L I SN+R +TL +YL N++GI +DTR +TR LR+
Sbjct: 72 VNAEDVESTRIHAAGLIIKDLPILISNFRSTQTLSDYLKSENVVGIAGIDTRKLTRILRE 131
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E + ++ LE+++S+ + G+DL VS K+ + W E+ +W
Sbjct: 132 KGAQSGAILAGEDATAEKALELAKSFGGLAGLDLAKVVSTKQSYPWTET---EWTLGEGY 188
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + Y V+A+D+G+K NILR LA GC++ V+P+ A+E L L PDG+ SNGPGD
Sbjct: 189 GQQTAPQYHVVAFDYGVKFNILRMLAQRGCKVTVLPAQASAAEALALNPDGIFLSNGPGD 248
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KEL+ + +P FGIC+GHQ++ A G
Sbjct: 249 PEPCDYAIAASKELIDRGIPTFGICLGHQIMALASG 284
>gi|343500654|ref|ZP_08738544.1| carbamoyl phosphate synthase small subunit [Vibrio tubiashii ATCC
19109]
gi|418477385|ref|ZP_13046518.1| carbamoyl phosphate synthase small subunit [Vibrio tubiashii NCIMB
1337 = ATCC 19106]
gi|342820016|gb|EGU54847.1| carbamoyl phosphate synthase small subunit [Vibrio tubiashii ATCC
19109]
gi|384575125|gb|EIF05579.1| carbamoyl phosphate synthase small subunit [Vibrio tubiashii NCIMB
1337 = ATCC 19106]
Length = 379
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGESIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|268685817|ref|ZP_06152679.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
SK-93-1035]
gi|268626101|gb|EEZ58501.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
SK-93-1035]
Length = 399
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 183/285 (64%), Gaps = 13/285 (4%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TMLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 D----FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ F T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGV 255
Query: 237 LFSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 256 FLSNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|21759022|sp|Q50983.1|CARA_NEIGO RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|1000500|emb|CAA91011.1| CarA [Neisseria gonorrhoeae]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P Y + V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYGIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|16763456|ref|NP_459071.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|167989924|ref|ZP_02571024.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197264738|ref|ZP_03164812.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|374982411|ref|ZP_09723732.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378443520|ref|YP_005231152.1| carbamoyl-phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|378448351|ref|YP_005235710.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|378698049|ref|YP_005180006.1| carbamoyl-phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|378982608|ref|YP_005245763.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|378987471|ref|YP_005250635.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|422024180|ref|ZP_16370675.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|422029196|ref|ZP_16375470.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|427544465|ref|ZP_18925975.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|427560188|ref|ZP_18930738.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|427579465|ref|ZP_18935527.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|427601102|ref|ZP_18940341.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|427625404|ref|ZP_18945246.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|427648860|ref|ZP_18950007.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|427659394|ref|ZP_18954958.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|427664508|ref|ZP_18959705.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
gi|20143902|sp|P14845.2|CARA_SALTY RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|16418562|gb|AAL19030.1| carbamoyl-phosphate synthetase, glutamine-hydrolysing small subunit
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|197242993|gb|EDY25613.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|205331492|gb|EDZ18256.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261245299|emb|CBG23085.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267991729|gb|ACY86614.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301156697|emb|CBW16168.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911036|dbj|BAJ35010.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. T000240]
gi|321222365|gb|EFX47437.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|332987018|gb|AEF06001.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. UK-1]
gi|414024447|gb|EKT07825.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm1]
gi|414024602|gb|EKT07969.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm8]
gi|414026547|gb|EKT09813.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm2]
gi|414038721|gb|EKT21424.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm9]
gi|414039216|gb|EKT21894.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm3]
gi|414043671|gb|EKT26157.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm4]
gi|414052891|gb|EKT34914.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm10]
gi|414054484|gb|EKT36431.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm6]
gi|414058392|gb|EKT40059.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm11]
gi|414062321|gb|EKT43643.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. STm12]
Length = 382
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNKADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 280
>gi|161504814|ref|YP_001571926.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866161|gb|ABX22784.1| hypothetical protein SARI_02938 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 391
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 179/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + ++ + LE ++++ + G+DL +V+ E + W ++ T D
Sbjct: 131 LREKGAQNGCIIAGDNPDAKLALEKAKAFPGLNGMDLAKEVTTAEAYRWTQASWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSADEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L ++P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIHAIQKFLETEIPLFGICLGHQLLALASG 289
>gi|312795591|ref|YP_004028513.1| carbamoyl-phosphate synthase small subunit [Burkholderia
rhizoxinica HKI 454]
gi|312167366|emb|CBW74369.1| Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) [Burkholderia
rhizoxinica HKI 454]
Length = 432
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 180/276 (65%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG++ R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 54 ALLALADGTVLRGYSIGATGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 113
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGLVIR L + SN+R TL +YLA ++ I +DTR +TR LR+
Sbjct: 114 VNSEDVESSRVHAAGLVIRDLPVLASNFRAQRTLSDYLAGEGVVAIAGLDTRHLTRILRE 173
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + +Q+ +E++R++ + G+DL VS +EW E+ +W
Sbjct: 174 RGAQNGCILV--GTDEQQAVELARAFPGLAGMDLAKVVSTHARYEWTEA---EWRLGEGY 228
Query: 187 RNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
R +T +RV+A+D+GIK NILR LA GC + V+P+ A++ L L PDGV SNGPGD
Sbjct: 229 RAQQTPQHRVVAFDYGIKRNILRMLAERGCHVTVLPAQSSAADALALDPDGVFLSNGPGD 288
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P A YAVA +EL+ + VP FGIC+GHQ++ A+G
Sbjct: 289 PQACDYAVAATRELIERGVPTFGICLGHQVMALAVG 324
>gi|385334929|ref|YP_005888876.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
TCDC-NG08107]
gi|317163472|gb|ADV07013.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 399
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/285 (47%), Positives = 183/285 (64%), Gaps = 13/285 (4%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
P A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T P
Sbjct: 21 PIMSTPALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYP 80
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
HIGNTG N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +
Sbjct: 81 HIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRL 140
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
T LR+ G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 141 TMLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EW 197
Query: 181 D----FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ F T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV
Sbjct: 198 ELGKGFVTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGV 255
Query: 237 LFSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 256 FLSNGPGDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 299
>gi|417338863|ref|ZP_12120564.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
gi|357961086|gb|EHJ84674.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Baildon str. R6-199]
Length = 391
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 289
>gi|285018122|ref|YP_003375833.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) protein
[Xanthomonas albilineans GPE PC73]
gi|283473340|emb|CBA15845.1| probable carbamoyl-phosphate synthase (glutamine-hydrolyzing)
protein [Xanthomonas albilineans GPE PC73]
Length = 374
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/273 (46%), Positives = 173/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ + GA+G VGEVVFNT++TGYQEI+TDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGVAVGATGLSVGEVVFNTAMTGYQEIVTDPSYARQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ Q + AGL++R + SNWR L +LA+R ++ I +DTR +TR LR+
Sbjct: 65 CTDQDDEAAQVWSAGLIVRDVPRRPSNWRSQVALPQWLAQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L D L + G+DL VS +P+ W E + D D N +
Sbjct: 125 KGAQNGALMAGAVDVDAALDAARGFPGLKGMDLAKVVSTDQPYAWREG-QLDLDRNVFVQ 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYD+G+K NILR LA GC + VVP+ P + L ++PDGV SNGPGDP+
Sbjct: 184 VEPRFKVVAYDYGVKRNILRMLAERGCDVTVVPAQTPVDQVLAMQPDGVFLSNGPGDPAP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A +K+LL K+P FGIC+GHQLL A G
Sbjct: 244 CDYAIAAIKQLLARKIPTFGICLGHQLLALAAG 276
>gi|410089678|ref|ZP_11286291.1| carbamoyl phosphate synthase small subunit [Pseudomonas viridiflava
UASWS0038]
gi|409763065|gb|EKN48053.1| carbamoyl phosphate synthase small subunit [Pseudomonas viridiflava
UASWS0038]
Length = 378
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNKMSLDDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++ S++ + +R + + G+DL +VS K+ +EW S WD T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAARGFPGLKGMDLAKEVSTKDTYEWRSSV---WDLKTDS 181
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K NILR L GC++ VVP+ PA + L PDGV SNG
Sbjct: 182 HAEIAASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAKDVLAYNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L + PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAITAIKEVLETETPVFGICLGHQLLALASG 280
>gi|375122180|ref|ZP_09767344.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
gi|326626430|gb|EGE32773.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. SG9]
Length = 391
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 289
>gi|293397750|ref|ZP_06641956.1| carbamoyl-phosphate synthase, small subunit [Neisseria gonorrhoeae
F62]
gi|291611696|gb|EFF40765.1| carbamoyl-phosphate synthase, small subunit [Neisseria gonorrhoeae
F62]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNETVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + + ++ E+ ++ +VG DL +VS E +EW E +W+ F
Sbjct: 125 KGAQGGAILAGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGP
Sbjct: 182 VTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 240 GDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|84624397|ref|YP_451769.1| carbamoyl phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|161898979|ref|YP_201527.2| carbamoyl phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzae KACC 10331]
gi|84368337|dbj|BAE69495.1| carbamoyl-phosphate synthase small chain [Xanthomonas oryzae pv.
oryzae MAFF 311018]
Length = 374
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 174/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+R+ + +GL++R + SNWR L +L R ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEARKIWASGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L R + G+DL VS + + W E + D + + R
Sbjct: 125 KGAQNGALMAGEIDVEKALDAARRFPGLKGMDLAKVVSTESTYNWQEG-QLDLNADAFVR 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+A+D+G+K NILR LA GC + VVP+ P +E L L+PDGV SNGPGDP
Sbjct: 184 AGLKYKVVAFDYGVKLNILRMLAERGCDVTVVPAQTPVAEVLALQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +KEL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAIGAIKELIAQKVPTFGICLGHQLLALAAG 276
>gi|325925174|ref|ZP_08186587.1| carbamoyl-phosphate synthase small subunit [Xanthomonas perforans
91-118]
gi|325544428|gb|EGD15798.1| carbamoyl-phosphate synthase small subunit [Xanthomonas perforans
91-118]
Length = 374
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 173/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+R+ + AGL++R + SNWR L +L R ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEARKIWAAGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L + + G+DL VS ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTEKTYLWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+AYD+G+K NILR LA GC + VVP+ P +E L L+P GV SNGPGDP
Sbjct: 184 VPAKYKVVAYDYGVKLNILRMLAERGCDVTVVPARTPVAEVLALQPAGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +KEL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAIDAIKELIAQKVPTFGICLGHQLLALAAG 276
>gi|268602791|ref|ZP_06136958.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
PID1]
gi|268586922|gb|EEZ51598.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
PID1]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|451965667|ref|ZP_21918924.1| carbamoyl-phosphate synthase small chain [Edwardsiella tarda NBRC
105688]
gi|451315469|dbj|GAC64286.1| carbamoyl-phosphate synthase small chain [Edwardsiella tarda NBRC
105688]
Length = 385
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 180/285 (63%), Gaps = 13/285 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRSIGADGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GL++R L + SN+R ETL +YL ++ I D+DTR +TR
Sbjct: 62 NVGTNSADEESSAVHAQGLIVRDLPLIASNFRSQETLSDYLRRHQVVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQE---LLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
LR+ G+ G + T E + + LE +R++ + G+DL +V+ +P+EW + + W
Sbjct: 122 LREKGAQNGCIITAEPGCEPDATLALEKARAFPGLKGMDLAKEVTTPQPYEWRQGS---W 178
Query: 181 DFN-----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+ + + Y V+AYDFG+K NILR L GC++ VVP+ A L L PDG
Sbjct: 179 TLSEGLPAARDVSELPYHVVAYDFGVKRNILRMLVDRGCRLTVVPAQTSAQAVLDLNPDG 238
Query: 236 VLFSNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
+ SNGPGDP+ YA+ AI L G++P+FGIC+GHQLL A G
Sbjct: 239 IFLSNGPGDPAPCEYAIEAIATFLRGEIPLFGICLGHQLLALASG 283
>gi|347595641|sp|Q8RSS4.2|CARA_HALER RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|298285490|emb|CAD24314.2| carbamoylphosphate synthetase small subunit [Halomonas eurihalina]
Length = 381
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 181/282 (64%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 AILALEDGSVFHGTAIGADGQTSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES AGLVIR L + S++RC ++L +YLA++N++GI D+ TR +TR LR
Sbjct: 65 VNSEDVESSSIAAAGLVIRDLPLLASSFRCEQSLSDYLAQQNVLGIADMHTRRLTRLLRD 124
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWD----IVGIDLISDVSGKEPFEWVESTKPDWDF 182
GS G +L+ +++ + + + G+DL VS EP+EW E +W
Sbjct: 125 KGSQNGAILAGPDAEGEDAEARALEAARAFPGLKGMDLAKVVSCAEPYEWSEG---EWTL 181
Query: 183 NTH----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + Y V+AYD+G+K NILR LA+ GC++ VVP+ PA E L + PDG+
Sbjct: 182 GSGYADVSQGDRPYHVVAYDYGMKRNILRMLAARGCRLTVVPAQTPAEEVLAMNPDGIFL 241
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ ++ L ++PVFGIC+GHQLL A G
Sbjct: 242 SNGPGDPEPCDYAISAIQAFLETEIPVFGICLGHQLLALASG 283
>gi|149375767|ref|ZP_01893535.1| carbamoyl-phosphate synthase small subunit [Marinobacter algicola
DG893]
gi|149359892|gb|EDM48348.1| carbamoyl-phosphate synthase small subunit [Marinobacter algicola
DG893]
Length = 374
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 183/276 (66%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS++ + GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIG+TG
Sbjct: 5 AILALADGSLFYGTAIGAEGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGSTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + AGL+IR L + SNWR +L +YL + NI+GI D+DTR +TR LR
Sbjct: 65 VNEEDIESDRVQAAGLIIRDLPLLVSNWRSTGSLQDYLRDNNIVGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
GS G + + + LE++ ++ + G+DL +V+ ++ + W +S +WD +
Sbjct: 125 KGSQNGAVVAGADATAERALELANAFPGLKGMDLAKEVTSEKAWTWSQS---EWDIESGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
ER ++V+A+D+G+K NILR LAS GC I VVP+ PA++ L + PDGV SNGPGD
Sbjct: 182 GERTESKFKVVAWDYGVKLNILRMLASRGCDITVVPAQTPAADVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA++ ++++L +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAISAIRDVLETDIPVFGICLGHQLLALASG 277
>gi|445252346|ref|ZP_21408991.1| carbamoyl phosphate synthase small subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
gi|444889539|gb|ELY12967.1| carbamoyl phosphate synthase small subunit, partial [Salmonella
enterica subsp. enterica serovar Enteritidis str. 436]
Length = 356
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 280
>gi|381198196|ref|ZP_09905535.1| carbamoyl phosphate synthase small subunit [Acinetobacter lwoffii
WJ10621]
Length = 380
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 183/287 (63%), Gaps = 25/287 (8%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG YL E N++ I D+DTR +TR
Sbjct: 65 CNDEDAESGRIHKVWANGLIIRDLPLLHSNFRSTQSLGEYLKEHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVES-------- 175
LR G+ G + E+ ++++ LE +R++ + G+DL + FEW E
Sbjct: 125 LRDKGAQNGCILAGENITEEQALEKARAFGGLNGLDLAKECCDPTGFEWTEGSWVLGKGF 184
Query: 176 TKPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
T+P+ F+ V+AYD+G+K NILR LA GC++ VVP+ PA++ L L PDG
Sbjct: 185 TQPELKFH----------VVAYDYGVKTNILRMLADRGCKLTVVPAQTPAADVLALNPDG 234
Query: 236 VLFSNGPGDPSAVPYAVAIVKELLG---KVPVFGICMGHQLLGQALG 279
V SNGPGDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 235 VFLSNGPGDPAACDYAIEAVKTIVEDARNLPVFGICLGHQILALASG 281
>gi|343503823|ref|ZP_08741629.1| carbamoyl phosphate synthase small subunit [Vibrio ichthyoenteri
ATCC 700023]
gi|342813909|gb|EGU48866.1| carbamoyl phosphate synthase small subunit [Vibrio ichthyoenteri
ATCC 700023]
Length = 384
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 181/284 (63%), Gaps = 15/284 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFSGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + S+ ++ E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGSSVNGENLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WT 181
Query: 182 FN-----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L LKPDGV
Sbjct: 182 LTGGLPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALKPDGV 241
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 FLSNGPGDPAPCTYAIEATKVFLEKNLPLFGICLGHQILALASG 285
>gi|261253797|ref|ZP_05946370.1| carbamoyl-phosphate synthase small chain [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417953471|ref|ZP_12596516.1| carbamoyl phosphate synthase small subunit [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|260937188|gb|EEX93177.1| carbamoyl-phosphate synthase small chain [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342817072|gb|EGU51959.1| carbamoyl phosphate synthase small subunit [Vibrio orientalis CIP
102891 = ATCC 33934]
Length = 379
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGESIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCILAGNNIDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLDKGLPIFGICLGHQILALASG 280
>gi|322834466|ref|YP_004214493.1| carbamoyl-phosphate synthase small subunit [Rahnella sp. Y9602]
gi|384259689|ref|YP_005403623.1| carbamoyl phosphate synthase small subunit [Rahnella aquatilis HX2]
gi|321169667|gb|ADW75366.1| carbamoyl-phosphate synthase, small subunit [Rahnella sp. Y9602]
gi|380755665|gb|AFE60056.1| carbamoyl phosphate synthase small subunit [Rahnella aquatilis HX2]
Length = 383
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSAVHAQGLVIRDLPLIASNYRSEENLSDYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S + L+ ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAELALQKAKAFPGLKGMDLAKEVTTTESYRWQQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G K NILR L GC++ VVP+ PA + LK+ PDG+
Sbjct: 179 GELPEAKKAEDLPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIKTFLETDIPVFGICLGHQLLALASG 280
>gi|268681340|ref|ZP_06148202.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
PID332]
gi|268621624|gb|EEZ54024.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
PID332]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|261378473|ref|ZP_05983046.1| carbamoyl-phosphate synthase, small subunit [Neisseria cinerea ATCC
14685]
gi|269145266|gb|EEZ71684.1| carbamoyl-phosphate synthase, small subunit [Neisseria cinerea ATCC
14685]
Length = 376
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+AYDFG+K NILR LA+ GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPYHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|168230329|ref|ZP_02655387.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194472503|ref|ZP_03078487.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205351408|ref|YP_002225209.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|207855580|ref|YP_002242231.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|378953871|ref|YP_005211358.1| carbamoyl-phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|418787567|ref|ZP_13343368.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|418792672|ref|ZP_13348412.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|418796479|ref|ZP_13352171.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|421356557|ref|ZP_15806877.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|421362992|ref|ZP_15813235.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|421366054|ref|ZP_15816259.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|421370973|ref|ZP_15821133.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|421374917|ref|ZP_15825038.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|421379777|ref|ZP_15829842.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|421386379|ref|ZP_15836393.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|421388728|ref|ZP_15838714.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|421394548|ref|ZP_15844488.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|421399095|ref|ZP_15848991.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|421403632|ref|ZP_15853477.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|421406868|ref|ZP_15856680.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|421413913|ref|ZP_15863663.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|421417085|ref|ZP_15866796.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|421423084|ref|ZP_15872748.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|421426051|ref|ZP_15875680.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|421431503|ref|ZP_15881085.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|421433741|ref|ZP_15883299.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|421439876|ref|ZP_15889357.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|421446169|ref|ZP_15895589.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|421449026|ref|ZP_15898411.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|436600731|ref|ZP_20512972.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|436704795|ref|ZP_20518495.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|436800376|ref|ZP_20524410.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|436806565|ref|ZP_20526720.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812762|ref|ZP_20531094.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436830927|ref|ZP_20535637.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436852217|ref|ZP_20542538.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855509|ref|ZP_20544667.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436866008|ref|ZP_20551784.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436870679|ref|ZP_20554314.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436876962|ref|ZP_20558129.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436887508|ref|ZP_20563845.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436895129|ref|ZP_20568192.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436902084|ref|ZP_20572913.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436908972|ref|ZP_20575860.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436919969|ref|ZP_20582728.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436924262|ref|ZP_20585410.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436933633|ref|ZP_20589840.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436940345|ref|ZP_20594353.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436952788|ref|ZP_20601360.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436958689|ref|ZP_20603224.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436972142|ref|ZP_20610144.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436978509|ref|ZP_20612512.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436993059|ref|ZP_20618046.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437003520|ref|ZP_20621700.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437023051|ref|ZP_20628861.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437036871|ref|ZP_20634150.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437042155|ref|ZP_20635871.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437048716|ref|ZP_20639730.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437060166|ref|ZP_20646329.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437064326|ref|ZP_20648347.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437072945|ref|ZP_20652755.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437080924|ref|ZP_20657464.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437093565|ref|ZP_20663882.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|437109018|ref|ZP_20667559.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|437120844|ref|ZP_20671618.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|437130519|ref|ZP_20676688.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|437138590|ref|ZP_20681114.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|437142941|ref|ZP_20683953.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|437152796|ref|ZP_20690048.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|437159372|ref|ZP_20693864.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|437171069|ref|ZP_20700364.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|437174940|ref|ZP_20702441.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|437182114|ref|ZP_20706846.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|437246982|ref|ZP_20714857.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|437260702|ref|ZP_20717823.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|437269649|ref|ZP_20722870.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|437281101|ref|ZP_20728382.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|437286989|ref|ZP_20730491.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|437316953|ref|ZP_20737891.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|437331590|ref|ZP_20741965.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|437341085|ref|ZP_20744527.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|437397577|ref|ZP_20751487.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|437422721|ref|ZP_20755213.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|437451898|ref|ZP_20759585.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|437459286|ref|ZP_20761138.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|437474194|ref|ZP_20766213.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|437489991|ref|ZP_20770771.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|437518894|ref|ZP_20778565.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|437535640|ref|ZP_20781590.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|437553933|ref|ZP_20784150.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|437576363|ref|ZP_20790532.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|437596913|ref|ZP_20796528.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|437604127|ref|ZP_20798757.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|437615930|ref|ZP_20802508.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|437650201|ref|ZP_20809762.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|437661730|ref|ZP_20813168.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|437674177|ref|ZP_20816330.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|437696513|ref|ZP_20822474.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|437717204|ref|ZP_20828191.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|437729304|ref|ZP_20830661.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|437792247|ref|ZP_20837273.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|437803660|ref|ZP_20838573.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|438043973|ref|ZP_20855910.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|438085805|ref|ZP_20858913.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|438099035|ref|ZP_20863157.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|438108096|ref|ZP_20866851.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|438131534|ref|ZP_20873660.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|445129192|ref|ZP_21380659.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|445169054|ref|ZP_21395071.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|445218013|ref|ZP_21402432.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|445232901|ref|ZP_21406195.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|445328169|ref|ZP_21412833.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|445352842|ref|ZP_21420849.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|445358291|ref|ZP_21422555.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
gi|194458867|gb|EDX47706.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205271189|emb|CAR35976.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|205335026|gb|EDZ21790.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|206707383|emb|CAR31656.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|357204482|gb|AET52528.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Gallinarum/pullorum str.
RKS5078]
gi|392765824|gb|EJA22608.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19447]
gi|392766625|gb|EJA23398.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19449]
gi|392771348|gb|EJA28069.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19567]
gi|395988240|gb|EJH97397.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639016-6]
gi|395990882|gb|EJI00008.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 640631]
gi|395993476|gb|EJI02570.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 622731-39]
gi|396004744|gb|EJI13725.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-0424]
gi|396005594|gb|EJI14571.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 485549-17]
gi|396007174|gb|EJI16133.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-6]
gi|396013285|gb|EJI22173.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-22]
gi|396014998|gb|EJI23882.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-26]
gi|396019134|gb|EJI27992.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 596866-70]
gi|396028419|gb|EJI37180.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-46]
gi|396028441|gb|EJI37201.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629164-37]
gi|396033037|gb|EJI41753.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 639672-50]
gi|396038342|gb|EJI46982.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-1427]
gi|396038760|gb|EJI47395.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 78-1757]
gi|396042970|gb|EJI51584.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 77-2659]
gi|396052362|gb|EJI60869.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 8b-1]
gi|396055147|gb|EJI63638.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22510-1]
gi|396061668|gb|EJI70090.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648905 5-18]
gi|396063587|gb|EJI71978.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-3079]
gi|396069122|gb|EJI77466.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 6-18]
gi|396071257|gb|EJI79583.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 58-6482]
gi|434941477|gb|ELL47913.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Pullorum str. ATCC 9120]
gi|434958904|gb|ELL52417.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS44]
gi|434969090|gb|ELL61804.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434975354|gb|ELL67655.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22704]
gi|434975752|gb|ELL68026.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982557|gb|ELL74367.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434984898|gb|ELL76598.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434992263|gb|ELL83720.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434994276|gb|ELL85636.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE30663]
gi|434994329|gb|ELL85679.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435001453|gb|ELL92545.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435009000|gb|ELL99796.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435010569|gb|ELM01334.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435017245|gb|ELM07752.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435019871|gb|ELM10299.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435028667|gb|ELM18740.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435029812|gb|ELM19861.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435041141|gb|ELM30893.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435042417|gb|ELM32137.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435046319|gb|ELM35936.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435049493|gb|ELM39020.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435055525|gb|ELM44936.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435055724|gb|ELM45134.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435066103|gb|ELM55193.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435069415|gb|ELM58415.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435073177|gb|ELM62066.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435073542|gb|ELM62415.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435075873|gb|ELM64678.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435084742|gb|ELM73311.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435092063|gb|ELM80436.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435098569|gb|ELM86810.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435100811|gb|ELM88966.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435108999|gb|ELM96954.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111300|gb|ELM99204.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 576709]
gi|435112254|gb|ELN00131.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435119213|gb|ELN06834.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 635290-58]
gi|435125674|gb|ELN13115.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-19]
gi|435126528|gb|ELN13923.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-16]
gi|435133042|gb|ELN20225.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607307-2]
gi|435141460|gb|ELN28401.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 607308-9]
gi|435141818|gb|ELN28748.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 629163]
gi|435146713|gb|ELN33495.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_N202]
gi|435149437|gb|ELN36132.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE15-1]
gi|435157180|gb|ELN43641.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_56-3991]
gi|435164106|gb|ELN50219.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_81-2490]
gi|435165429|gb|ELN51480.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_76-3618]
gi|435169750|gb|ELN55520.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL913]
gi|435171028|gb|ELN56672.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13183-1]
gi|435171914|gb|ELN57469.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SL909]
gi|435179409|gb|ELN64557.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 638970-15]
gi|435184288|gb|ELN69233.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CVM_69-4941]
gi|435188785|gb|ELN73460.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 17927]
gi|435193971|gb|ELN78431.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. CHS4]
gi|435198317|gb|ELN82522.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 22558]
gi|435200343|gb|ELN84344.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 22-17]
gi|435208739|gb|ELN92145.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 40-18]
gi|435222535|gb|ELO04643.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 1-1]
gi|435224681|gb|ELO06642.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 4-1]
gi|435227598|gb|ELO09075.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648898 4-5]
gi|435230825|gb|ELO12090.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642046 4-7]
gi|435240406|gb|ELO20808.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648899 3-17]
gi|435243711|gb|ELO23967.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 1-17]
gi|435244114|gb|ELO24345.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648900 1-16]
gi|435249476|gb|ELO29301.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 39-2]
gi|435257625|gb|ELO36905.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648902 6-8]
gi|435262306|gb|ELO41435.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648903 1-6]
gi|435267893|gb|ELO46533.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648904 3-6]
gi|435268215|gb|ELO46828.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 653049 13-19]
gi|435276947|gb|ELO54931.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 561362 9-7]
gi|435278561|gb|ELO56391.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 642044 8-1]
gi|435284222|gb|ELO61718.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 543463 42-20]
gi|435290194|gb|ELO67135.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 648901 16-16]
gi|435293907|gb|ELO70565.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 76-2651]
gi|435303293|gb|ELO79200.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 33944]
gi|435319009|gb|ELO91897.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 81-2625]
gi|435320715|gb|ELO93230.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 50-5646]
gi|435326190|gb|ELO98024.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 62-1976]
gi|435333215|gb|ELP04042.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 53-407]
gi|444853708|gb|ELX78775.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9184]
gi|444856799|gb|ELX81821.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 20037]
gi|444861948|gb|ELX86816.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE10]
gi|444863884|gb|ELX88698.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. SE8a]
gi|444873651|gb|ELX97944.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 13-1]
gi|444880298|gb|ELY04377.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. 18569]
gi|444886204|gb|ELY09969.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. PT23]
Length = 382
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 280
>gi|124025635|ref|YP_001014751.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. NATL1A]
gi|123960703|gb|ABM75486.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. NATL1A]
Length = 384
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/277 (44%), Positives = 181/277 (65%), Gaps = 3/277 (1%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
++A L+LEDG+ + SFGA GT GEVVFNT +TGYQE++TDPSY GQ + T P IGN
Sbjct: 7 SSAILLLEDGTYFEGLSFGAVGTISGEVVFNTGMTGYQEVITDPSYFGQLITFTYPEIGN 66
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
TGVN++D ES + G++ R +S SNWR + N+L + N++GI+ +DTR + R +
Sbjct: 67 TGVNYEDNESSHPSVKGVIARQISKTPSNWRHEISFENWLKDENVVGIHGIDTRLLVRHI 126
Query: 126 RQDGSLIGVLSTEESKSDQELLE-MSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
R+ GSL G++S+E S EL + +S + G++L+ V+ K F S +D
Sbjct: 127 RESGSLNGIISSESKYSIAELFSLLKKSPSMSGLNLVDKVTTKSAFNANSSCPVAFDMRI 186
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y+V+A DFGIK +IL RL ++GC++ V+P++ ++ L L P+GV SNGPGD
Sbjct: 187 KNTQTIPYKVVAIDFGIKQSILDRLVAHGCEVTVLPASAEMTDVLALSPEGVFLSNGPGD 246
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
PS V + + K+L+ K+PVFGIC+GHQ+LG ALG
Sbjct: 247 PSTVDSGINLAKDLIEYKKLPVFGICLGHQILGLALG 283
>gi|440289164|ref|YP_007341929.1| carbamoyl-phosphate synthase small subunit [Enterobacteriaceae
bacterium strain FGI 57]
gi|440048686|gb|AGB79744.1| carbamoyl-phosphate synthase small subunit [Enterobacteriaceae
bacterium strain FGI 57]
Length = 382
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNYRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ +E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNLDAALALEKARAFPGLNGMDLAKEVTTRESYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDGV
Sbjct: 179 EELPEAKKEEELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGVFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|224581906|ref|YP_002635704.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|224466433|gb|ACN44263.1| carbamoyl-phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
Length = 391
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 176/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q LVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQSLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 289
>gi|292493678|ref|YP_003529117.1| carbamoyl-phosphate synthase, small subunit [Nitrosococcus
halophilus Nc4]
gi|291582273|gb|ADE16730.1| carbamoyl-phosphate synthase, small subunit [Nitrosococcus
halophilus Nc4]
Length = 395
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 173/280 (61%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDGSI+R + G G VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN
Sbjct: 18 DALLALEDGSIFRGTAIGCPGQTVGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNV 77
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES Q + +GLVIR SNWR E L +L ++ I D+DTR +TR LR
Sbjct: 78 GANSEDRESDQVYASGLVIRDYPATFSNWRAEEPLDAFLVRNQVVAIADIDTRKLTRCLR 137
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW----- 180
+ G+L G + E + E + +R++ + G+DL V+ + W E + W
Sbjct: 138 EHGALNGCIMAGEGIDEAEAIAQARAFPGLKGMDLAQVVTTSTSYGWSEGS---WRLEKD 194
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
D + E+ + V+ YDFG+KHNILR L GC++ VVP+ A+E L L PDG+L SN
Sbjct: 195 DSVSSEKTPDRFHVVVYDFGVKHNILRLLVDQGCRVTVVPARTSAAEVLALSPDGILLSN 254
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ ++E L + +P+FGIC+GHQLL A G
Sbjct: 255 GPGDPEPCDYAIVAIREFLTQSIPLFGICLGHQLLALASG 294
>gi|350530225|ref|ZP_08909166.1| carbamoyl phosphate synthase small subunit [Vibrio rotiferianus
DAT722]
Length = 379
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|254492960|ref|ZP_05106131.1| carbamoyl-phosphate synthase subunit small chain [Neisseria
gonorrhoeae 1291]
gi|268594037|ref|ZP_06128204.1| carbamoylphosphate synthase small subunit [Neisseria gonorrhoeae
35/02]
gi|226512000|gb|EEH61345.1| carbamoyl-phosphate synthase subunit small chain [Neisseria
gonorrhoeae 1291]
gi|268547426|gb|EEZ42844.1| carbamoylphosphate synthase small subunit [Neisseria gonorrhoeae
35/02]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|197249998|ref|YP_002145049.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|440765677|ref|ZP_20944692.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|440766189|ref|ZP_20945187.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
gi|440773283|ref|ZP_20952182.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|197213701|gb|ACH51098.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|436412006|gb|ELP09951.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH11G1113]
gi|436416739|gb|ELP14642.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH10GFN094]
gi|436423372|gb|ELP21184.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Agona str. SH08SF124]
Length = 382
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 280
>gi|421857646|ref|ZP_16289975.1| carbamoyl-phosphate synthase small chain [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|403186909|dbj|GAB76176.1| carbamoyl-phosphate synthase small chain [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 379
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ KS GASG GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGKSIGASGCTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES ++ + GL+IR L + SN+R +LG YL + N++ I D+DTR +TR
Sbjct: 65 CNAEDAESGRIQKVWANGLIIRDLPLLHSNFRADMSLGEYLEQNNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ + +E LE +R++ + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITAEEALEKARAFGGLEGLDLAKECCDPEGFEWTEGS---WALG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ P + L L PDGV SNGP
Sbjct: 182 QGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPVEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACGYAIKAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|424032013|ref|ZP_17771434.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HENC-01]
gi|408876425|gb|EKM15542.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HENC-01]
Length = 384
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/284 (47%), Positives = 180/284 (63%), Gaps = 15/284 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + S+ ++ E L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGSSINGENLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WT 181
Query: 182 F-----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV
Sbjct: 182 LEGGLPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGV 241
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 FLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 285
>gi|59800518|ref|YP_207230.1| carbamoyl phosphate synthase small subunit [Neisseria gonorrhoeae
FA 1090]
gi|59717413|gb|AAW88818.1| carbamoylphosphate synthase small subunit [Neisseria gonorrhoeae FA
1090]
Length = 377
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 182/279 (65%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----F 182
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+ F
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
T ++ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGP
Sbjct: 182 VTPDK--QPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGP 239
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 240 GDPEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|294634968|ref|ZP_06713485.1| carbamoyl-phosphate synthase, small subunit [Edwardsiella tarda
ATCC 23685]
gi|291091567|gb|EFE24128.1| carbamoyl-phosphate synthase, small subunit [Edwardsiella tarda
ATCC 23685]
Length = 389
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 131/285 (45%), Positives = 180/285 (63%), Gaps = 13/285 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 6 IKSALLVLEDGTQFHGRSIGADGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 65
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GL++R L + SN+R ETL +YL ++ I D+DTR +TR
Sbjct: 66 NVGTNSADEESSAVHAQGLIVRDLPLIASNFRSQETLSDYLRRHQVVAIADIDTRKLTRL 125
Query: 125 LRQDGSLIGVLSTEESKSDQE---LLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW 180
LR+ G+ G + T E + + LE +R++ + G+DL +V+ +P+EW + + W
Sbjct: 126 LREKGAQNGCIITAEPGCEPDATLALEKARAFPGLKGMDLAKEVTTPQPYEWRQGS---W 182
Query: 181 DFN-----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+ + + Y V+AYDFG+K NILR L GC++ VVP+ A L L PDG
Sbjct: 183 TLSEGLPAARDVSELPYHVVAYDFGVKRNILRMLVDRGCRLTVVPAQTSAQAVLDLNPDG 242
Query: 236 VLFSNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
+ SNGPGDP+ YA+ AI L G++P+FGIC+GHQLL A G
Sbjct: 243 IFLSNGPGDPAPCEYAIEAIATFLRGEIPLFGICLGHQLLALASG 287
>gi|153825884|ref|ZP_01978551.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae MZO-2]
gi|149740382|gb|EDM54513.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae MZO-2]
Length = 379
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG+K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGVKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|398998971|ref|ZP_10701725.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM18]
gi|398132812|gb|EJM22069.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM18]
Length = 378
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S+ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGAQNGCIMAGDNISEAAAIAAAQGFPGLKGMDLAKVVSTKETYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 182 HATIDASDLPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADILALKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|417321329|ref|ZP_12107869.1| carbamoyl phosphate synthase small subunit [Vibrio parahaemolyticus
10329]
gi|328472009|gb|EGF42886.1| carbamoyl phosphate synthase small subunit [Vibrio parahaemolyticus
10329]
Length = 379
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S G G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGTDGVSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W +
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLESGL 181
Query: 187 RNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|307730497|ref|YP_003907721.1| carbamoyl-phosphate synthase small subunit [Burkholderia sp.
CCGE1003]
gi|307585032|gb|ADN58430.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp.
CCGE1003]
Length = 384
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 186/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERTLTQYLQDEGVVAIAGLDTRKLTRLLRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS KE +EW T+ +W
Sbjct: 128 KGAQNGAILAGSDDEAKA----VELARSFPGLAGMDLAKVVSTKETYEW---TQTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++N+ YRV+A+D+G+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNG
Sbjct: 181 EGYGKQNAPKYRVVAFDYGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KEL+ + +P FGIC+GHQ++G ALG
Sbjct: 241 PGDPEPCDYAIAATKELIERGIPTFGICLGHQIMGLALG 279
>gi|225175358|ref|ZP_03729353.1| carbamoyl-phosphate synthase, small subunit [Dethiobacter
alkaliphilus AHT 1]
gi|225169110|gb|EEG77909.1| carbamoyl-phosphate synthase, small subunit [Dethiobacter
alkaliphilus AHT 1]
Length = 378
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 178/279 (63%), Gaps = 9/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A +VL DG+++ FGA G +GEVVFNTS+TGYQEILTDPSY GQ V MT P IGN G
Sbjct: 4 ALMVLADGTVFEGTGFGAEGEVIGEVVFNTSMTGYQEILTDPSYKGQIVTMTCPQIGNYG 63
Query: 68 VNFDDEESR-QCFLAGLVIRSLSIGTSNWRCAET------LGNYLAERNIMGIYDVDTRA 120
VN +D ES + + G V++ SNWR A++ LGNYL E I+GI +DTRA
Sbjct: 64 VNDEDAESSGRPKVEGFVVKEYLDFPSNWRAADSSGRCKSLGNYLKENKIVGIEGIDTRA 123
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
+T LR +GS +G++ST + + L ++ I +DL+ +VS + F W + P W
Sbjct: 124 LTAHLRNNGSQMGIISTFDFSVESLLHKVRSHPGIAELDLVEEVSAAQTFSWNKGCAP-W 182
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + K V YDFG+KHNILR LA G + VVP+T PA + L+ DGVL SN
Sbjct: 183 -CRSVGKEDKPLNVAVYDFGVKHNILRNLAEAGFAVTVVPATTPAEQLLEKNFDGVLLSN 241
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPG+P V YA+ K+LLGK+P+FGIC+GHQ+LG A+G
Sbjct: 242 GPGNPETVTYAIENTKKLLGKIPIFGICLGHQILGLAMG 280
>gi|254285955|ref|ZP_04960916.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
AM-19226]
gi|150423865|gb|EDN15805.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
AM-19226]
Length = 379
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADSDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|255318891|ref|ZP_05360117.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
radioresistens SK82]
gi|262378854|ref|ZP_06072011.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
radioresistens SH164]
gi|421464815|ref|ZP_15913504.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
radioresistens WC-A-157]
gi|255304147|gb|EET83338.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
radioresistens SK82]
gi|262300139|gb|EEY88051.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
radioresistens SH164]
gi|400204744|gb|EJO35727.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
radioresistens WC-A-157]
Length = 379
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ KS GASG GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGKSIGASGCTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES ++ + GL+IR L + SN+R +LG YL + N++ I D+DTR +TR
Sbjct: 65 CNTEDAESGRIQKVWANGLIIRDLPLLHSNFRADMSLGEYLEQNNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ + +E LE +R++ + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITAEEALEKARAFGGLEGLDLAKECCDPEGFEWTEGS---WALG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ P + L L PDGV SNGP
Sbjct: 182 QGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPVEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACGYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|188026535|ref|ZP_02962493.2| hypothetical protein PROSTU_04616 [Providencia stuartii ATCC 25827]
gi|188019333|gb|EDU57373.1| carbamoyl-phosphate synthase, small subunit [Providencia stuartii
ATCC 25827]
Length = 396
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 174/279 (62%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 11 IKSAILVLEDGTEFHGRAIGAEGAAVGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES GL+IR L + SN+R E L YL N++ I D+DTR +TR
Sbjct: 71 NVGTNADDEESPNVHAQGLIIRDLPLVYSNFRGQEGLLEYLKRHNVVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + ++ LE +R++ + G+DL +V KE + W + T D
Sbjct: 131 LREKGAQNGCIIAGDAPDAALALEKARAFSGLNGLDLAKEVCTKEAYSWTQGSWTLADGQ 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+T PA L + PDG+ SNG
Sbjct: 191 LSAKSEDELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMDPDGIFLSNG 250
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +++ L ++PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAIKAIQDFLKTEIPVFGICLGHQLLALASG 289
>gi|383191666|ref|YP_005201794.1| carbamoyl-phosphate synthase small subunit [Rahnella aquatilis CIP
78.65 = ATCC 33071]
gi|371589924|gb|AEX53654.1| carbamoyl-phosphate synthase, small subunit [Rahnella aquatilis CIP
78.65 = ATCC 33071]
Length = 383
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSAVHAQGLVIRDLPLIASNYRSEENLSDYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S + L+ ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSPDAELALQKAKAFPGLKGMDLAKEVTTTESYSWQQGS---WTLE 178
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
K + V+AYD+G K NILR L GC++ VVP+ PA++ LKL PDG+
Sbjct: 179 EELPAVKRAEDLPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPAADVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIKTFLETDIPVFGICLGHQLLALASG 280
>gi|261211489|ref|ZP_05925777.1| carbamoyl-phosphate synthase small chain [Vibrio sp. RC341]
gi|260839444|gb|EEX66070.1| carbamoyl-phosphate synthase small chain [Vibrio sp. RC341]
Length = 379
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL V+ +E ++W + + W +
Sbjct: 124 EKGAQNGCIMAGDKLDEALALAKAKEFPGLKGMDLAKVVTTQEAYQWKQGS---WTLESG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADCDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|153802022|ref|ZP_01956608.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae MZO-3]
gi|124122432|gb|EAY41175.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae MZO-3]
Length = 379
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|91792355|ref|YP_562006.1| carbamoyl phosphate synthase small subunit [Shewanella
denitrificans OS217]
gi|91714357|gb|ABE54283.1| carbamoyl-phosphate synthase small subunit [Shewanella
denitrificans OS217]
Length = 381
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGSVFSGTAIGAKGMSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R ++L +YL N++GI D+DTR +TR LR
Sbjct: 64 GTNDEDTESTGVHACGLIIRDLPLLASNFRNQQSLSDYLVANNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
+ G+L G + + + L E + G+DL +V+ + + W + W
Sbjct: 124 EKGALAGCIMVGDIDEAKALAEAKAFPGLKGMDLAKEVTTDKAYNWRNGS---WRLVGGL 180
Query: 184 THERNSK--TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H+ S Y+V+AYD+G+KHNILR L GC + VVP+ PASE L + PDGV SNG
Sbjct: 181 PHDTPSDELKYKVVAYDYGVKHNILRMLVDRGCDVTVVPAQTPASEVLAMNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP+ YA+ ++ LL +VP+FGIC+GHQLL A G
Sbjct: 241 PGDPAPCTYAIEAIQALLKTEVPIFGICLGHQLLALASG 279
>gi|417499534|ref|ZP_12173633.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
gi|353653641|gb|EHC95125.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Senftenberg str. A4-543]
Length = 376
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 289
>gi|452746371|ref|ZP_21946192.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
NF13]
gi|452009768|gb|EME01980.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
NF13]
Length = 382
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 182/277 (65%), Gaps = 6/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLISSNWRDKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST---KPDWDFN 183
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S K D
Sbjct: 129 KGAQNGCILAGSDATEEKALELARSFPGLKGMDLAKEVSVKERYEWRSSVWCLKEDGHAE 188
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPG
Sbjct: 189 I-PASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPG 247
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 248 DPEPCDYAIKAIQDVLETDIPVFGICLGHQLLALASG 284
>gi|374999797|ref|ZP_09724138.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
gi|353078015|gb|EHB43774.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Infantis str. SARB27]
Length = 391
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E L++ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLEMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|213609677|ref|ZP_03369503.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 382
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 176/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHI
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIS 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|16759059|ref|NP_454676.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|21759035|sp|Q8Z9L8.1|CARA_SALTI RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|25291398|pir||AD0510 carbamoyl-phosphate synthase small chain [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16501349|emb|CAD01220.1| carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 382
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 176/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P DP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PSDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|254804326|ref|YP_003082547.1| carbamoyl phosphate synthase small subunit [Neisseria meningitidis
alpha14]
gi|254667868|emb|CBA03937.1| carbamoyl-phosphate synthase small chain [Neisseria meningitidis
alpha14]
Length = 377
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + +GL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYASGLIIRDLPLLHSNFRASESLHDYLVRNQTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAQDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|188532865|ref|YP_001906662.1| carbamoyl phosphate synthase small subunit [Erwinia tasmaniensis
Et1/99]
gi|188027907|emb|CAO95764.1| Carbamoyl-phosphate synthase small chain [Erwinia tasmaniensis
Et1/99]
Length = 391
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGAIGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q AGLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNSADEESTQVHAAGLVIRDLPLIASNYRNEEGLSEYLIRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W++ + W
Sbjct: 131 LREKGAQNGCIIAGDALDAAVALEKARAFPGLKGMDLAKEVTTPEAYTWLQGS---WTLE 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ A + LKL PDGV
Sbjct: 188 EELPKAKAESDLPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTRAEDVLKLNPDGVFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ + LL +PVFGIC+GHQLL + G
Sbjct: 248 SNGPGDPEPCDYAITAINRLLETDIPVFGICLGHQLLALSSG 289
>gi|149922969|ref|ZP_01911388.1| carbamoyl-phosphate synthase small subunit [Plesiocystis pacifica
SIR-1]
gi|149816155|gb|EDM75664.1| carbamoyl-phosphate synthase small subunit [Plesiocystis pacifica
SIR-1]
Length = 398
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/280 (47%), Positives = 180/280 (64%), Gaps = 8/280 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG ++R + FGA GT VGEVVFNT+L GYQEI++DPSYAGQ V +T +GN G
Sbjct: 10 ALLVLADGRVFRGQGFGARGTVVGEVVFNTALYGYQEIVSDPSYAGQIVCLTAAEVGNVG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N D+ES + GLVIRSLS SN+R +LG YLA R ++GI +VDTRA+TR LR+
Sbjct: 70 TNARDDESDKAAAVGLVIRSLSPVVSNYRSEASLGEYLARRGVLGIAEVDTRALTRHLRE 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST--KPDWD-FNT 184
G+ + V+STE D + + + + G +L+ V+ K + W ES+ P + +
Sbjct: 130 HGAQMAVISTEIEDVDALREQAAAAPSMAGRNLVDGVTTKARYTWTESSWRAPSAEGLSG 189
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E RV+AYDFGIK NIL +L G + VVP++ P +E L +PDGV SNGPGD
Sbjct: 190 AEPPPADLRVVAYDFGIKRNILCKLRDQGIETTVVPASTPVAEVLAEEPDGVFLSNGPGD 249
Query: 245 PSAVPYAVAIVKELLG-----KVPVFGICMGHQLLGQALG 279
P+AV +A ++EL+ +P+FGIC+GHQLL ALG
Sbjct: 250 PAAVEAVIAQLRELVADDRSKDLPIFGICLGHQLLCLALG 289
>gi|116747461|ref|YP_844148.1| carbamoyl phosphate synthase small subunit [Syntrophobacter
fumaroxidans MPOB]
gi|116696525|gb|ABK15713.1| carbamoyl-phosphate synthase small subunit [Syntrophobacter
fumaroxidans MPOB]
Length = 391
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 173/278 (62%)
Query: 2 PWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNP 61
PW +A L+LEDG+++R +F G +GEVVFNTS+TGYQE+LTDPSY GQ V MT P
Sbjct: 4 PWKRNSALLLLEDGTVFRGYAFAGGGRALGEVVFNTSMTGYQEVLTDPSYKGQMVTMTYP 63
Query: 62 HIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAI 121
G G+N +D ES + +++ SNWR +L ++L E N +GI +DTRA+
Sbjct: 64 LTGAYGINDEDMESAAVQVEAFIVKEYQEFPSNWRSNRSLADFLNEYNKIGIEGIDTRAL 123
Query: 122 TRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD 181
TR +R G++ G+++T+ + + E+ + GIDL+ V+ +P+ W KP
Sbjct: 124 TRHIRMGGAMRGIIATDTDNVKELMEEVQAYPGLNGIDLVKTVTCSKPYLWRTGVKPGTL 183
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
N RV A D G+K+NILR+L + GCQ++V P+ A E KPDGV SNG
Sbjct: 184 EPKWPENRPELRVAAIDCGVKYNILRKLEASGCQVMVFPAHVSAREIAACKPDGVFLSNG 243
Query: 242 PGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDPSAV Y + V+ LLG+ PVFGIC+GHQ++G ALG
Sbjct: 244 PGDPSAVGYVIETVRSLLGEKPVFGICLGHQMMGLALG 281
>gi|417323720|ref|ZP_12110193.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
gi|353581113|gb|EHC42155.1| Carbamoyl-phosphate synthase small chain [Salmonella enterica
subsp. enterica serovar Adelaide str. A4-669]
Length = 395
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 131 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTTETYRWTQGSWTLKDGL 190
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 191 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 250
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 251 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 289
>gi|168234814|ref|ZP_02659872.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194738235|ref|YP_002113081.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|418513458|ref|ZP_13079688.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
gi|194713737|gb|ACF92958.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197291836|gb|EDY31186.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|366081819|gb|EHN45759.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Pomona str. ATCC 10729]
Length = 382
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E L++ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLEMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|418292336|ref|ZP_12904279.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
ATCC 14405 = CCUG 16156]
gi|379063762|gb|EHY76505.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
ATCC 14405 = CCUG 16156]
Length = 382
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 181/276 (65%), Gaps = 4/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR + L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLISSNWRDKQPLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S D E
Sbjct: 129 KGAQNGCILAGSDATEEKALELARSFPGLKGMDLAKEVSVKERYEWRSSVWCLKDDGHAE 188
Query: 187 --RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPGD
Sbjct: 189 IPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPGD 248
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 249 PEPCDYAIKAIQQVLETDIPVFGICLGHQLLALASG 284
>gi|357417415|ref|YP_004930435.1| carbamoyl phosphate synthase small subunit [Pseudoxanthomonas
spadix BD-a59]
gi|355334993|gb|AER56394.1| carbamoyl phosphate synthase small subunit [Pseudoxanthomonas
spadix BD-a59]
Length = 405
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 181/291 (62%), Gaps = 19/291 (6%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G +GEVVFNT++TGYQEI+TDPSYA Q V +T PHIGNT
Sbjct: 4 SAILVLEDGTVFEGQSVGAHGLSIGEVVFNTAMTGYQEIVTDPSYARQLVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G D+E+ + + AGL++R + S+WR L ++L R ++ I +DTR +TR LR
Sbjct: 64 GCTDQDDEAGKVWSAGLIVRDVPRRPSSWRSQVPLQDWLKARGVIAISGIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
+ G+ G L + +Q L + + G+DL VS ++ + W E + D D N
Sbjct: 124 EHGAQNGALMAGQIDVEQALEAARKFPGLKGMDLAKVVSTQQAYTWSEG-QLDLDTNKFV 182
Query: 186 ----------------ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETL 229
R +TY+V+AYD+G+K NILR LA GC++ VVP+ PA+E L
Sbjct: 183 GLGAKRIEKSADGCAGSRAGRTYKVVAYDYGVKRNILRMLAERGCEVTVVPAQTPAAEVL 242
Query: 230 KLKPDGVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
LKPDGV SNGPGDP YA+A +KEL+ K+P+FGIC+GHQLL A G
Sbjct: 243 ALKPDGVFLSNGPGDPQPCDYAIAAIKELVEKKIPIFGICLGHQLLALAAG 293
>gi|312963095|ref|ZP_07777580.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens WH6]
gi|311282606|gb|EFQ61202.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas
fluorescens WH6]
Length = 378
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDVESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
GS G + ++ S++ + ++ + + G+DL VS KE +EW + WD T
Sbjct: 125 KGSQNGCIMVGDAISEEAAIAAAQGFPGLKGMDLAKVVSTKEQYEWRSTV---WDLKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E Y V+AYD+G+K+NILR L GC++ VVP+ PAS+ L ++PDGV SNG
Sbjct: 182 HATIESADLPYHVVAYDYGVKYNILRMLVERGCRVTVVPAQTPASDVLAMQPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLDTEIPVFGICLGHQLLALASG 280
>gi|50122792|ref|YP_051959.1| carbamoyl phosphate synthase small subunit [Pectobacterium
atrosepticum SCRI1043]
gi|60389564|sp|Q6D0C8.1|CARA_ERWCT RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|49613318|emb|CAG76769.1| carbamoyl-phosphate synthase small chain [Pectobacterium
atrosepticum SCRI1043]
Length = 382
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGLAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +DEES GLVIR L + SN+R E+L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAVVALEKAKAFPGLKGMDLAKEVTTAESYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GELPAAKNESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIRAIKTFLETGIPVFGICLGHQLLALASG 280
>gi|417330981|ref|ZP_12115382.1| Carbamoyl-phosphate synthase small chain, partial [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
gi|353587251|gb|EHC46613.1| Carbamoyl-phosphate synthase small chain, partial [Salmonella
enterica subsp. enterica serovar Alachua str. R6-377]
Length = 357
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 174/274 (63%), Gaps = 4/274 (1%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 EADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWDFNTHE 186
+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 121 AQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGLPEAKS 180
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNGPGDP+
Sbjct: 181 EDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNGPGDPA 240
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 241 PCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 274
>gi|218547479|ref|YP_002381270.1| carbamoyl phosphate synthase small subunit [Escherichia fergusonii
ATCC 35469]
gi|218355020|emb|CAQ87626.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia fergusonii ATCC 35469]
Length = 382
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|197283935|ref|YP_002149807.1| carbamoyl-phosphate synthase small subunit [Proteus mirabilis
HI4320]
gi|194681422|emb|CAR40260.1| carbamoyl-phosphate synthase small chain [Proteus mirabilis HI4320]
Length = 387
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 174/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTEFHGRSIGAEGAAIGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTGVN DEES GL+IR L + SN+R E+L +YL I+ I D+DTR +TR
Sbjct: 62 NTGVNSSDEESATIHAQGLIIRDLPLVMSNYRAEESLADYLKRHQIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL V+ ++P++W + + W
Sbjct: 122 LREKGAQNGCIIAGTHLDAKQALEKAKAFPGLKGMDLAKTVTVEQPYQWTQGS---WTLK 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T V+AYDFG+K NILR L GC++ VVP+ A E L L PDG+
Sbjct: 179 GELPATQSPQDLPLHVVAYDFGVKRNILRMLVDRGCRVTVVPAQTSAQEVLALSPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ AI L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIDAIQTFLTTDIPVFGICLGHQLLALASG 280
>gi|291326912|ref|ZP_06126329.2| carbamoyl-phosphate synthase, small subunit [Providencia rettgeri
DSM 1131]
gi|291312504|gb|EFE52957.1| carbamoyl-phosphate synthase, small subunit [Providencia rettgeri
DSM 1131]
Length = 396
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 11 IKSAILVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES GL+IR L + SN+R E L YL N++ I D+DTR +TR
Sbjct: 71 NVGTNADDEESPNVHAQGLIIRDLPLVYSNFRGQEGLSEYLKRHNVVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +RS+ + G+DL +V KE + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDVALALEKARSFSGLNGLDLAKEVCTKEIYNWSQGS---WTLE 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
++ +KT V+AYDFG K NILR L GC++ VVP+T PA L + PDG+
Sbjct: 188 NGQQGAKTAEELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ ++ L ++PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAIKAIETFLTTEIPVFGICLGHQLLALASG 289
>gi|59711079|ref|YP_203855.1| carbamoyl phosphate synthase small subunit [Vibrio fischeri ES114]
gi|59479180|gb|AAW84967.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Vibrio fischeri ES114]
Length = 385
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGQSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +DEES GLVIR L + SN+R +TL YL +NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDEESSSIHAQGLVIRDLPLLASNFRSEQTLSEYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL +V+ E ++W + + W
Sbjct: 124 EKGAQNGCIVAGTNLDEAFALAQAKEFPGLKGMDLAKEVTTSEAYQWKQGS---WTLTGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
K + V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SN
Sbjct: 181 LPEEKADSELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPAPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|354721690|ref|ZP_09035905.1| carbamoyl phosphate synthase small subunit [Enterobacter mori LMG
25706]
Length = 382
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 180/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDF 182
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W + + + D
Sbjct: 122 LREKGAQNGCIIAGDNLDATLALEKAKAFPGLNGMDLAKEVTTAEAYSWTQGSWTLEGDL 181
Query: 183 NTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++ S+ + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+ SNG
Sbjct: 182 PEAKKESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIAAIKSFLETDIPVFGICLGHQLLALASG 280
>gi|197335631|ref|YP_002155228.1| carbamoyl phosphate synthase small subunit [Vibrio fischeri MJ11]
gi|197317121|gb|ACH66568.1| carbamoyl-phosphate synthase, small subunit [Vibrio fischeri MJ11]
Length = 385
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGQSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +DEES GLVIR L + SN+R +TL YL +NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDEESSSIHAQGLVIRDLPLLASNFRSEQTLSEYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL +V+ E ++W + + W
Sbjct: 124 EKGAQNGCIVAGTNLDEAFALAQAKEFPGLKGMDLAKEVTTSEAYQWKQGS---WTLTGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
K + V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SN
Sbjct: 181 LPEEKADSELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPAPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|333893743|ref|YP_004467618.1| carbamoyl-phosphate synthase small subunit [Alteromonas sp. SN2]
gi|332993761|gb|AEF03816.1| carbamoyl-phosphate synthase small subunit [Alteromonas sp. SN2]
Length = 376
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/275 (47%), Positives = 179/275 (65%), Gaps = 3/275 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GA GT VGEVVFNTS+TGYQEI+TDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGAQGTAVGEVVFNTSMTGYQEIITDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D E+ + + GL+IR L + SN+R +TL YL + ++GI D+DTR +TR LR
Sbjct: 64 GINEEDVEADKIWSKGLIIRDLPLVASNFRQQQTLSEYLKAKGVVGIADIDTRRLTRILR 123
Query: 127 QDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ G ++ T+E L + + G+DL VS EP W E + +
Sbjct: 124 DKGAQNGCIVCTDELDEASALAQAKDYPGLKGMDLAKVVSITEPKTWTEGSWKLGEGYIT 183
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+SK Y V+AYD+G+K NILR LA GC++ +VP+ PA E L ++PDGV SNGPGDP
Sbjct: 184 PADSK-YHVVAYDYGVKSNILRLLADRGCRVTLVPAQTPAEEVLAMQPDGVFLSNGPGDP 242
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ +K ++ +PVFGIC+GHQLL A G
Sbjct: 243 EPCDYAITAIKTIVETGLPVFGICLGHQLLALASG 277
>gi|365846571|ref|ZP_09387073.1| carbamoyl-phosphate synthase, small subunit [Yokenella regensburgei
ATCC 43003]
gi|364573703|gb|EHM51190.1| carbamoyl-phosphate synthase, small subunit [Yokenella regensburgei
ATCC 43003]
Length = 386
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 180/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 6 IKSALLVLEDGTQFIGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 65
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR+
Sbjct: 66 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRK 125
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ GS G + ++ E ++++ + G+DL +V+ E + W T+ W +
Sbjct: 126 LRETGSQNGCIIAGDNLDATLAQEKAKAFPGLSGMDLAKEVTTAENYSW---TQGSWTLS 182
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + ++ V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 183 GDLPEAKKEDELSFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMSPDGIFL 242
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +++ L +PVFGIC+GHQLL A G
Sbjct: 243 SNGPGDPAPCDYAIAAIEKFLETDIPVFGICLGHQLLALASG 284
>gi|350544015|ref|ZP_08913681.1| Carbamoyl-phosphate synthase small chain [Candidatus Burkholderia
kirkii UZHbot1]
gi|350528204|emb|CCD36239.1| Carbamoyl-phosphate synthase small chain [Candidatus Burkholderia
kirkii UZHbot1]
Length = 380
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 190/279 (68%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R +S GASG+ +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGRSIGASGSTIGEVVFNTAITGYQEILTDPSYARQMVTLTYPHIGNYG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R +TL +YL +N++ I +DTR +TR LR+
Sbjct: 68 VNAEDVEAAKVHAAGLIIRDLPVLASNFRSEQTLSDYLKAQNVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ L ++RS+ + G+DL VS ++P+EW T+ +W
Sbjct: 128 KGAQNGCILAGSDDEAKA----LGLARSFPGLAGMDLAKVVSTEKPYEW---TQTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + +RV+A+D+G+K+NILR LA GC + V+P+ A+E L L PDG+ SNG
Sbjct: 181 SGYGRQEAPKFRVVAFDYGVKYNILRMLAERGCYVTVLPAQATAAEALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A +E + + +P FGIC+GHQ++G ALG
Sbjct: 241 PGDPEPCDYAIAATREFIERGIPTFGICLGHQIMGLALG 279
>gi|444921646|ref|ZP_21241481.1| Carbamoyl-phosphate synthase small chain [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507373|gb|ELV07550.1| Carbamoyl-phosphate synthase small chain [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 374
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 178/276 (64%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS + + G+ G VGEVVFNTS+TGYQEILTDPSY Q + +T PHIGNTG
Sbjct: 5 ALLVLADGSTFHGTAIGSEGQTVGEVVFNTSMTGYQEILTDPSYTKQMITLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES AGL+IR L + SN+R E+L +YL N++ I D+DTR +TRRLR+
Sbjct: 65 TNREDEESDSVHAAGLIIRDLPLLASNFRNTESLEDYLKRHNVVAIADIDTRRLTRRLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + T + + ++ + + G+DL +V+ +EW E +W
Sbjct: 125 KGAQAGCIVTGHNPDIAAAQKAAQDFGSMAGLDLAKEVTCDAAYEWTEG---EWRLGESF 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
H + Y V+AYDFG+K NILR LA GC++ VVP+T PASE L + PDGV SNGPGD
Sbjct: 182 HTDIKQPYHVVAYDFGVKRNILRMLAERGCRLTVVPATTPASEVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++E+L K P+FGIC+GHQLLG ALG
Sbjct: 242 PEPCDYAIKAIQEILAAKKPIFGICLGHQLLGLALG 277
>gi|254521946|ref|ZP_05134001.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas sp.
SKA14]
gi|219719537|gb|EED38062.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas sp.
SKA14]
Length = 375
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 184 VPAKFKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 244 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 276
>gi|398875590|ref|ZP_10630760.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM67]
gi|398884395|ref|ZP_10639330.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM60]
gi|398194553|gb|EJM81622.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM60]
gi|398206812|gb|EJM93571.1| carbamoyl-phosphate synthase, small subunit [Pseudomonas sp. GM67]
Length = 378
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 65 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS KE +EW + W+ T
Sbjct: 125 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKETYEWRSTV---WELKTDS 181
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L +KPDGV SNG
Sbjct: 182 HATIDASELPYHVVAYDYGVKLNILRMLVERGCRVTVVPAQTPAADVLAMKPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +K++L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAIQAIKDVLETEIPVFGICLGHQLLALASG 280
>gi|242238044|ref|YP_002986225.1| carbamoyl-phosphate synthase small subunit [Dickeya dadantii
Ech703]
gi|242130101|gb|ACS84403.1| carbamoyl-phosphate synthase, small subunit [Dickeya dadantii
Ech703]
Length = 382
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E+L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGANNADEESPAIHAQGLVIRDLPLIASNYRSEESLSDYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ +E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAALALEKAKAFPGLKGMDLAKEVTTRESYPWLQGS---WTLQ 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+T PA + LKL PDG+
Sbjct: 179 GELPPAKAEDELPFHVVAYDYGVKRNILRMLVDRGCRLTVVPATTPADDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIKAFLATDIPVFGICLGHQLLALASG 280
>gi|119944657|ref|YP_942337.1| carbamoyl-phosphate synthase small subunit [Psychromonas ingrahamii
37]
gi|119863261|gb|ABM02738.1| carbamoyl-phosphate synthase small subunit [Psychromonas ingrahamii
37]
Length = 378
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 177/278 (63%), Gaps = 8/278 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ S GA G+ +GEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SAILVLEDGTVFEGISIGADGSSIGEVVFNTSMTGYQEILTDPSYARQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R L +YL + NI+ I ++DTR +TR LR
Sbjct: 64 GTNNEDEESTSIHACGLVIRDLPLLASNFRNQLGLSDYLKKHNIVAIAEIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN-- 183
+ G+ G + +E+ L ++++ + G+DL +VS E + W + + W
Sbjct: 124 EKGAQAGCIVADENLDQALALSQAKAFPGLKGMDLAKEVSTTEAYNWAQGS---WTLTGG 180
Query: 184 -THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+A+D+G+K NILR L GC++ VVP+ AS+ L + PDG+ SNGP
Sbjct: 181 LPADATDSKYHVVAFDYGVKRNILRMLVDRGCRVTVVPAQTSASDVLAMNPDGIFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 241 GDPEPCTYAITAIQEILKTEIPVFGICLGHQLLALASG 278
>gi|344342949|ref|ZP_08773819.1| carbamoyl-phosphate synthase, small subunit [Marichromatium
purpuratum 984]
gi|343805501|gb|EGV23397.1| carbamoyl-phosphate synthase, small subunit [Marichromatium
purpuratum 984]
Length = 380
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 179/281 (63%), Gaps = 12/281 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R S GA G+ VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 AVLVLEDGSVFRGTSIGADGSSVGEVVFNTAMTGYQEILTDPSYLRQLVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES AGL+IR L SN+R E L +YL + ++GI D+DTR +TR LR+
Sbjct: 65 ANPEDEESAGIQAAGLIIRHLPQRASNFRQRERLDDYLRRQGVVGIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G L ++ + L +R + + G+DL + EP+ W T+ +W
Sbjct: 125 KGAQNGCLQAGDAIDEAAALAAARDFPGLKGMDLAQQATTAEPYAW---TQGEWALEGGL 181
Query: 184 ----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ ++V+AYDFG+K NILR LAS GC + VVP+ PA+E L + PDGV S
Sbjct: 182 PAPLDPADEALPFKVVAYDFGVKRNILRMLASRGCSVTVVPARTPAAEVLAMNPDGVFLS 241
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+A ++ELL +VP+FGIC+GHQLL A G
Sbjct: 242 NGPGDPEPCDYAIAAIRELLEHQVPLFGICLGHQLLALASG 282
>gi|425298203|ref|ZP_18688261.1| carbamoylphosphate synthetase small subunit [Escherichia coli
07798]
gi|408222179|gb|EKI46082.1| carbamoylphosphate synthetase small subunit [Escherichia coli
07798]
Length = 376
Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 175/277 (63%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 DADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 121 AQNGCIIAGDNPDVALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLTGGLPE 177
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+ SNGPG
Sbjct: 178 AKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 274
>gi|551926|gb|AAA25763.1| carbamoylphosphate synthetase (carA) (ttg start codon) [Pseudomonas
aeruginosa]
Length = 384
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +G+VVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGQVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
S + + AGLVIR L + SNWR ++L +YL E + + I +DTR +TR LR+
Sbjct: 69 TTPQSARSWKVWAAGLVIRDLPLLASNWRNKQSLPSYLKENDTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S W+ T
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKERYEWRYSL---WNLETDS 185
Query: 187 R-----NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y V+AYD+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NG
Sbjct: 186 HPEIPASELPYHVVAYDYGVKYNILRMLVARGCRVTVLPAQTPASEALGLNPDGIFLANG 245
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ ++E+L +PVFGIC+GHQL+ A G
Sbjct: 246 PGDPEPCDYAIRAIQEVLETDIPVFGICLGHQLVALASG 284
>gi|424668600|ref|ZP_18105625.1| carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia Ab55555]
gi|401068862|gb|EJP77386.1| carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia Ab55555]
Length = 439
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 69 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 128
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 129 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 188
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 189 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 247
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 248 VPAKFKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 307
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 308 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 340
>gi|339495446|ref|YP_004715739.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
gi|338802818|gb|AEJ06650.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
ATCC 17588 = LMG 11199]
Length = 382
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 182/277 (65%), Gaps = 6/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLISSNWRNKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS K+ +EW ST + H
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKDRYEW-RSTVWCLKDDAHA 187
Query: 187 R---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ Y V+A+D+GIK+NILR L + GC++ V+P+ PASE L L PDG+ NGPG
Sbjct: 188 EIPASELPYHVVAFDYGIKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLGNGPG 247
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 248 DPEPCDYAIKAIQEVLETDIPVFGICLGHQLLALASG 284
>gi|88857847|ref|ZP_01132489.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas tunicata D2]
gi|88819464|gb|EAR29277.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Pseudoalteromonas tunicata D2]
Length = 377
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/275 (47%), Positives = 173/275 (62%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R + GA G VGEVVFNTS+TGYQEI+TDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGTAIGAEGISVGEVVFNTSMTGYQEIITDPSYAEQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + + GLVIR L + SN+R ++L YL RNI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEEANKIWAKGLVIRDLPLLASNFRNEQSLDEYLKARNILGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST-KPDWDFNTH 185
G+ G + E + L + G+DL VS E ++W E + + F T
Sbjct: 124 DKGAQNGCIIAGEIDEAKALEAAKAFPGLKGMDLAKVVSTTEQYQWNEGSWQLGQGFKTL 183
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ V+AYDFG+K NILR L GC++ VVP+ A++ L L PDG+ SNGPGDP
Sbjct: 184 ADADAKFHVVAYDFGVKRNILRMLVDRGCKLTVVPAQTSAADVLALNPDGIFLSNGPGDP 243
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+ YA+ +K L P+FGIC+GHQLL A G
Sbjct: 244 APCTYAIEAIKAFLETDTPIFGICLGHQLLALASG 278
>gi|156973231|ref|YP_001444138.1| carbamoyl phosphate synthase small subunit [Vibrio harveyi ATCC
BAA-1116]
gi|156524825|gb|ABU69911.1| hypothetical protein VIBHAR_00912 [Vibrio harveyi ATCC BAA-1116]
Length = 416
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/284 (46%), Positives = 179/284 (63%), Gaps = 15/284 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S G G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 37 ALLVLEDGTVFRGVSIGTDGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 96
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 97 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 156
Query: 128 DGSLIGVLSTEESKSDQEL---LEMSRSWD---IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + + S + + L L ++++ + + G+DL +V+ KE ++W + + W
Sbjct: 157 KGAQNGCIVADSSINGENLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WT 213
Query: 182 F-----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGV 236
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV
Sbjct: 214 LEGGLPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGV 273
Query: 237 LFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 274 FLSNGPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 317
>gi|153207448|ref|ZP_01946148.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|120576579|gb|EAX33203.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii 'MSU
Goat Q177']
Length = 382
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 176/275 (64%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 13 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ ++AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 73 VNMDDQESRRIWVAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 133 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 189
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 190 HASSRAYQVVVYDFGLKQQILRLLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 249
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 250 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 284
>gi|380512656|ref|ZP_09856063.1| carbamoyl phosphate synthase small subunit [Xanthomonas sacchari
NCPPB 4393]
Length = 374
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 173/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAAGLSVGEVVFNTAMTGYQEILTDPSYARQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ Q + AGL++R + SNWR L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 CTDQDDEAAQVWSAGLIVRDVPRRPSNWRNQVALPDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
GS G L E D L + + G+DL VS + W + + D D N
Sbjct: 125 KGSQNGALMAGEVNVDTALEAARKFPGLKGMDLAKVVSTDTAYPWRDG-QLDLDSNAFVT 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYD+G+K NILR LA GC++ VVP+ P ++ L + P GV SNGPGDP+
Sbjct: 184 AEPRFKVVAYDYGVKLNILRMLAERGCEVTVVPAQTPVADVLAMNPHGVFLSNGPGDPAP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A +KELL K+P FGIC+GHQLL A G
Sbjct: 244 CDYAIAAIKELLARKIPTFGICLGHQLLALAAG 276
>gi|344207280|ref|YP_004792421.1| carbamoyl-phosphate synthase small subunit [Stenotrophomonas
maltophilia JV3]
gi|343778642|gb|AEM51195.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas
maltophilia JV3]
Length = 439
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 69 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 128
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 129 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 188
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 189 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 247
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 248 VPAKFKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 307
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 308 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 340
>gi|408822700|ref|ZP_11207590.1| carbamoyl phosphate synthase small subunit [Pseudomonas geniculata
N1]
Length = 375
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 184 VPSRFKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 244 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 276
>gi|424935140|ref|ZP_18353512.1| Carbamoylphosphate synthetase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|407809327|gb|EKF80578.1| Carbamoylphosphate synthetase small subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
Length = 376
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 175/277 (63%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 AADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHERN 188
+ G + +S Q LE ++++ + G+DL +V+ E + W + + W
Sbjct: 121 AQNGCIIAGDSPDAQLALEKAKAFPGLNGMDLAKEVTTAETYSWTQGS---WTLAGDLPE 177
Query: 189 SKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+K + V+AYDFG K NILR L GC++ VVP+ A++ L L PDG+ SNGPG
Sbjct: 178 AKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAADVLALNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAIEAIEKFLETDIPVFGICLGHQLLALASG 274
>gi|386718391|ref|YP_006184717.1| carbamoyl-phosphate synthase small subunit [Stenotrophomonas
maltophilia D457]
gi|384077953|emb|CCH12542.1| Carbamoyl-phosphate synthase small chain [Stenotrophomonas
maltophilia D457]
Length = 375
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 176/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 65 MTDQDNEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 125 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYTWTEG-QLDLDANAFVS 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 184 VPARFKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 244 CDYAIEAIKTFIDVKIPTFGICLGHQLLGLASG 276
>gi|157863078|gb|ABV90643.1| carbamoyl-phosphate synthase small subunit [Pseudomonas sp. G]
Length = 386
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R ++ GA G VGEVVFNT++TGYQEILTDPSYA Q V T PHIGNTG
Sbjct: 13 AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTPTYPHIGNTG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + SNWR +L +YL N++ I +DTR +TR LR+
Sbjct: 73 TTPEDAESDRVWSAGLVIRDLPLVASNWRNTMSLSDYLKANNVVAIAGIDTRRLTRILRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + ++ S++ + ++ + + G+DL VS K +EW + WD T
Sbjct: 133 KGAQNGCIMAGDNISEEAAIAAAQGFPGLKGMDLAKVVSTKTQYEWRSTV---WDLKTDS 189
Query: 186 ----ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E + Y V+AYD+G+K NILR L GC++ VVP+ PA++ L LKPDGV SNG
Sbjct: 190 HATIEASELPYHVVAYDYGVKVNILRMLVERGCRVTVVPAQTPAADVLALKPDGVFLSNG 249
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP YA+ +KE+L + PVFGIC+GHQLL A G
Sbjct: 250 PGDPEPCDYAIQAIKEVLETETPVFGICLGHQLLALASG 288
>gi|404379763|ref|ZP_10984815.1| carbamoyl-phosphate synthase small chain [Simonsiella muelleri ATCC
29453]
gi|404294557|gb|EFG30712.2| carbamoyl-phosphate synthase small chain [Simonsiella muelleri ATCC
29453]
Length = 375
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/275 (48%), Positives = 172/275 (62%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGISVGYQGNTSGEVVFNTAMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESRQ F AGL+IR L + SN+R E+L +YL + I D+DTR +TR LR
Sbjct: 65 TNSEDVESRQVFAAGLIIRDLPLLHSNFRSKESLQDYLIRHKTVAIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + T E + + ++ + + G DL +V+ + +EW E +W
Sbjct: 125 KGAQAGAILTGEYANLEHANQLIAEFGSMNGKDLAKEVTCAQSYEWHEG---EWALGEGF 181
Query: 187 RNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
R +T Y V YDFG+K NILR L+ GC++ V P+ PA+E L PDGV SNGPGDP
Sbjct: 182 RQPETPYHVAVYDFGVKTNILRMLSQRGCRLTVFPAQTPAAEVLASNPDGVFLSNGPGDP 241
Query: 246 SAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A ++E+L K PVFGIC+GHQLLG A G
Sbjct: 242 QPCDYAIAAIQEILATKKPVFGICLGHQLLGLATG 276
>gi|386810879|ref|ZP_10098105.1| carbamoyl-phosphate synthase small subunit [planctomycete KSU-1]
gi|386405603|dbj|GAB60986.1| carbamoyl-phosphate synthase small subunit [planctomycete KSU-1]
Length = 375
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 170/273 (62%), Gaps = 7/273 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG +++ S GASG +GEVVFNTS GYQEILTDPSY GQ V+MT P IGN
Sbjct: 5 KAILVLADGIVFKGFSLGASGEAIGEVVFNTSTMGYQEILTDPSYKGQMVVMTYPLIGNY 64
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N D ESR+ FL G + + S SNWR +L ++L + ++GI +DTR +T +R
Sbjct: 65 GINQKDYESRKLFLEGFITKECSPFPSNWRSQISLDDFLKKNGVIGIQGIDTRRLTTHIR 124
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G G++ST + + ++ S + G DL+ V+ + +EW D +
Sbjct: 125 DCGVQQGIISTTDFDIASLIQKIQASPGLAGSDLVKTVTCSDVYEW-------QDVDKDL 177
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ SK Y+V+ YD G+K+NILR+L GC ++VVP+ P + PDGV+ SNGPGDP
Sbjct: 178 KESKRYKVVVYDCGVKYNILRKLRDAGCSVLVVPAHTPVQTVFDMNPDGVVLSNGPGDPE 237
Query: 247 AVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
AVPY + +K LLGK PVFGIC+GHQLL LG
Sbjct: 238 AVPYMIENIKGLLGKKPVFGICLGHQLLALTLG 270
>gi|255068091|ref|ZP_05319946.1| carbamoyl-phosphate synthase, small subunit [Neisseria sicca ATCC
29256]
gi|255047689|gb|EET43153.1| carbamoyl-phosphate synthase, small subunit [Neisseria sicca ATCC
29256]
Length = 376
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 177/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESHSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS KE +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCKEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|552013|gb|AAA27032.1| carbamoyl-phosphate synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|1750391|gb|AAB39255.1| carbamoylphosphate synthetase small subunit [Salmonella enterica
subsp. enterica serovar Typhimurium]
Length = 382
Score = 253 bits (646), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTHFHGRAIGATGSAVGEVVFNTSMTGYQEIVTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNKADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAITAIQKFLETDIPLFGICLGHQLLALASG 280
>gi|194365588|ref|YP_002028198.1| carbamoyl phosphate synthase small subunit [Stenotrophomonas
maltophilia R551-3]
gi|194348392|gb|ACF51515.1| carbamoyl-phosphate synthase, small subunit [Stenotrophomonas
maltophilia R551-3]
Length = 393
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 23 AILVLEDGTVFEGESVGAPGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 82
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D+E+ + + AGL++R + SNWR +L ++L +R ++ I +DTR +TR LR+
Sbjct: 83 MTDQDDEASKVWSAGLIVRDVPRRPSNWRSQVSLQDWLIQRGVVAIAGIDTRKLTRILRE 142
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L + + G+DL V+ ++ + W E + D D N
Sbjct: 143 KGAQNGALMAGDIDVEKALEAARKFPGLKGMDLAKVVTTEKTYVWTEG-QLDLDANAFVS 201
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYDFG+K NILR LA GC++ VVP+ PA+E L LKPDGV SNGPGDP
Sbjct: 202 VPAKHKVVAYDFGVKTNILRMLAERGCEVTVVPAQTPAAEVLALKPDGVFLSNGPGDPEP 261
Query: 248 VPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ +K + K+P FGIC+GHQLLG A G
Sbjct: 262 CDYAIEAIKTFIEQKIPTFGICLGHQLLGLASG 294
>gi|170697945|ref|ZP_02889028.1| carbamoyl-phosphate synthase, small subunit [Burkholderia ambifaria
IOP40-10]
gi|172060234|ref|YP_001807886.1| carbamoyl phosphate synthase small subunit [Burkholderia ambifaria
MC40-6]
gi|170137111|gb|EDT05356.1| carbamoyl-phosphate synthase, small subunit [Burkholderia ambifaria
IOP40-10]
gi|171992751|gb|ACB63670.1| carbamoyl-phosphate synthase, small subunit [Burkholderia ambifaria
MC40-6]
Length = 381
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 185/278 (66%), Gaps = 12/278 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 INAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST-KPDWDF 182
G+ G + S +E+K+ +E++RS+ + G+DL VS +PFEW ++ + + +
Sbjct: 128 KGAQNGCILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTTKPFEWKQTEWRLEGGY 183
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
E S YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNGP
Sbjct: 184 GMQE--SPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 242 GDPEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|212218698|ref|YP_002305485.1| carbamoyl phosphate synthase small subunit [Coxiella burnetii
CbuK_Q154]
gi|212012960|gb|ACJ20340.1| carbamoyl-phosphate synthase small chain [Coxiella burnetii
CbuK_Q154]
Length = 402
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 176/275 (64%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 33 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 92
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ ++AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 93 VNMDDQESRRIWVAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 152
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 153 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 209
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 210 HASSRAYQVVVYDFGLKQQILRLLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 269
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 270 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 304
>gi|146283642|ref|YP_001173795.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
A1501]
gi|145571847|gb|ABP80953.1| carbamoyl-phosphate synthase small chain [Pseudomonas stutzeri
A1501]
Length = 382
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 183/277 (66%), Gaps = 6/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKLWAAGLVIRDLPLISSNWRDKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW ST + H
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKERYEW-RSTVWCLKDDAHA 187
Query: 187 R---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPG
Sbjct: 188 EIPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPG 247
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 248 DPEPCDYAIKAIQQVLETDIPVFGICLGHQLLALASG 284
>gi|424814942|ref|ZP_18240093.1| carbamoyl phosphate synthase small subunit [Escherichia fergusonii
ECD227]
gi|325495962|gb|EGC93821.1| carbamoyl phosphate synthase small subunit [Escherichia fergusonii
ECD227]
Length = 391
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + Y V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPYHVVAYDFGAKRNILRMLVDRGCRLTIVPARTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|115351220|ref|YP_773059.1| carbamoyl phosphate synthase small subunit [Burkholderia ambifaria
AMMD]
gi|115281208|gb|ABI86725.1| carbamoyl-phosphate synthase small subunit [Burkholderia ambifaria
AMMD]
Length = 380
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/278 (47%), Positives = 185/278 (66%), Gaps = 12/278 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 INAEDVEATKVHAAGLIIRDLPTLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRILRD 126
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST-KPDWDF 182
G+ G + S +E+K+ +E++RS+ + G+DL VS +PFEW ++ + + +
Sbjct: 127 KGAQNGCILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTTKPFEWKQTEWRLEGGY 182
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
E S YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNGP
Sbjct: 183 GMQE--SPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 241 GDPEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 278
>gi|165918937|ref|ZP_02219023.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii
Q321]
gi|165917334|gb|EDR35938.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii
Q321]
Length = 382
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 176/275 (64%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 13 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ ++AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 73 VNMDDQESRRIWVAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 133 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 189
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 190 HASSRAYQVVVYDFGLKQQILRFLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 249
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 250 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 284
>gi|349611097|ref|ZP_08890409.1| carbamoyl-phosphate synthase small subunit [Neisseria sp. GT4A_CT1]
gi|348614894|gb|EGY64432.1| carbamoyl-phosphate synthase small subunit [Neisseria sp. GT4A_CT1]
Length = 376
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 177/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS KE +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELITAFGSMVGKDLAKEVSCKEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LAS C++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLASRSCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCDYAIKAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|33151479|ref|NP_872832.1| carbamoyl phosphate synthase small subunit [Haemophilus ducreyi
35000HP]
gi|60389737|sp|Q7VP66.1|CARA_HAEDU RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|33147699|gb|AAP95221.1| carbamoyl-phosphate synthase, small subunit [Haemophilus ducreyi
35000HP]
Length = 389
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 184/289 (63%), Gaps = 20/289 (6%)
Query: 8 ARLVLEDGSIWRAKSFG---ASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
A LVL DGS + KS G S +GEVVFNT++TGYQEILTDPSYA Q V +T PHIG
Sbjct: 5 AILVLADGSTFYGKSIGYQAVSAYSIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIG 64
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTG N +D ES Q + +GL+IR L + SN+R +L +YL + NI+ I D+DTR +TR
Sbjct: 65 NTGTNDEDNESNQIYASGLIIRDLPLLHSNFRATSSLSDYLIQHNIIAIADIDTRRLTRI 124
Query: 125 LRQDGSLIGVLST-EESKSDQELLE----MSRSW-DIVGIDLISDVSGKEPFEWVESTKP 178
LR+ GS G + E++S + +E +++S+ + G DL +V+ + +EW E
Sbjct: 125 LRETGSQAGCIYIPNENESLAQAVEKAQDLAKSFGSMAGKDLAKEVTCQHRYEWQEGI-- 182
Query: 179 DWDFNTHE-------RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKL 231
W T+ + + T+ V+AYDFGIK NILR LA GC+I VVP+ A + L L
Sbjct: 183 -WHLPTNNAGKPFNLQTTPTFHVVAYDFGIKQNILRMLAERGCKITVVPAQTSAEDILAL 241
Query: 232 KPDGVLFSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PDG+ SNGPGDP YA+ +++LL + P+FGIC+GHQLLG A+G
Sbjct: 242 NPDGIFLSNGPGDPEPCTYAIQSIRQLLNTQKPIFGICLGHQLLGLAVG 290
>gi|307132641|ref|YP_003884657.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Dickeya dadantii 3937]
gi|306530170|gb|ADN00101.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Dickeya dadantii 3937]
Length = 381
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E+L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGANKADEESPAVHAQGLVIRDLPLIASNYRSEESLSDYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAALALEKAKAFPGLKGMDLAKEVTTHSSYSWLQGS---WTLE 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
E + Y V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDG+
Sbjct: 179 GELPAAKEESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ +K L ++PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAISAIKTFLETEIPVFGICLGHQLLALASG 280
>gi|262404706|ref|ZP_06081261.1| carbamoyl-phosphate synthase small chain [Vibrio sp. RC586]
gi|262349738|gb|EEY98876.1| carbamoyl-phosphate synthase small chain [Vibrio sp. RC586]
Length = 379
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 174/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDKLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|33578043|gb|AAQ22349.1| carbamoyl-phosphate synthase small chain, partial [Pseudomonas
stutzeri A15]
Length = 302
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 183/277 (66%), Gaps = 6/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+R +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR ++L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKLWAAGLVIRDLPLISSNWRDKQSLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW ST + H
Sbjct: 129 KGAQNGCILAGADATEEKALELARSFPGLKGMDLAKEVSVKERYEW-RSTVWCLKDDAHA 187
Query: 187 R---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPG
Sbjct: 188 EIPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPG 247
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 248 DPEPCDYAIKAIQQVLETDIPVFGICLGHQLLALASG 284
>gi|153838413|ref|ZP_01991080.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus AQ3810]
gi|149748176|gb|EDM59035.1| carbamoyl-phosphate synthase, small subunit [Vibrio
parahaemolyticus AQ3810]
Length = 411
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 37 ALLVLEDGTVFRGVSIGADGVSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 96
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 97 TNSVDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 156
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W +
Sbjct: 157 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLESGL 213
Query: 187 RNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 214 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 273
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 274 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 312
>gi|424047919|ref|ZP_17785475.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HENC-03]
gi|408883229|gb|EKM22016.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HENC-03]
Length = 379
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEDVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|418843714|ref|ZP_13398510.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
gi|392816470|gb|EJA72398.1| carbamoyl phosphate synthase small subunit [Salmonella enterica
subsp. enterica serovar Newport str. CVM 19443]
Length = 382
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 176/279 (63%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVI L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVICDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWD 181
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + T D
Sbjct: 122 LREKGAQNGCIIAGDSPDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGSWTLKDGL 181
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+ SNG
Sbjct: 182 PEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIEAIKKFLQTDIPVFGICLGHQLLALASG 280
>gi|417616366|ref|ZP_12266806.1| carbamoyl-phosphate synthase small chain [Escherichia coli G58-1]
gi|425275894|ref|ZP_18667251.1| carbamoylphosphate synthetase small subunit [Escherichia coli
ARS4.2123]
gi|345384115|gb|EGX13984.1| carbamoyl-phosphate synthase small chain [Escherichia coli G58-1]
gi|408207861|gb|EKI32571.1| carbamoylphosphate synthetase small subunit [Escherichia coli
ARS4.2123]
Length = 376
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 129/277 (46%), Positives = 175/277 (63%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 DADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 121 AQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLTGGLPE 177
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+ SNGPG
Sbjct: 178 AKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 274
>gi|410622146|ref|ZP_11332985.1| carbamoyl-phosphate synthase small subunit [Glaciecola pallidula
DSM 14239 = ACAM 615]
gi|410158544|dbj|GAC28359.1| carbamoyl-phosphate synthase small subunit [Glaciecola pallidula
DSM 14239 = ACAM 615]
Length = 380
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 179/278 (64%), Gaps = 8/278 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + G +G VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGCAGHSVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES + GL+IR L I S++R ++L +YL NI+ I D+DTR +TR LR
Sbjct: 64 GINSEDVESDKIRAKGLIIRDLPIIASSFRSEQSLSDYLVASNIVAIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST---KPDWDF 182
G+ G + T ++ + ++ L ++++ + G+DL VS EP W + + +D
Sbjct: 124 DKGAQRGCIVTADALTQEQALAAAKAFPGLKGMDLAKVVSRAEPTTWTDGSWQLGKGYDI 183
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
N + + Y V+AYDFG K+NILR L GC++ +VP+ A + L L PDG+ SNGP
Sbjct: 184 N---KQNLPYHVVAYDFGAKNNILRMLVDRGCKLTLVPAQTSAKDVLALNPDGIFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA+ +K L K +P+FGIC+GHQLL A G
Sbjct: 241 GDPEPCAYAIEAIKVFLDKSIPIFGICLGHQLLAIASG 278
>gi|283783817|ref|YP_003363682.1| carbamoyl-phosphate synthase small chain [Citrobacter rodentium
ICC168]
gi|282947271|emb|CBG86816.1| carbamoyl-phosphate synthase small chain [Citrobacter rodentium
ICC168]
Length = 382
Score = 253 bits (645), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/282 (45%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES + GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSRVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ Q LE ++++ + G+DL +V+ E + W + + W +
Sbjct: 122 LREKGAQNGCIIAGDNPDAQLALEKAKAFPGLNGMDLAKEVTTTETYSWTQGS---WTLS 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GDLPEAKKEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ +++ L +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIDAIQQFLNTDIPLFGICLGHQLLALASG 280
>gi|254361686|ref|ZP_04977823.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Mannheimia
haemolytica PHL213]
gi|452744430|ref|ZP_21944275.1| carbamoyl phosphate synthase small subunit [Mannheimia haemolytica
serotype 6 str. H23]
gi|153093208|gb|EDN74219.1| carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Mannheimia
haemolytica PHL213]
gi|452087544|gb|EME03922.1| carbamoyl phosphate synthase small subunit [Mannheimia haemolytica
serotype 6 str. H23]
Length = 377
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 181/280 (64%), Gaps = 13/280 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ KS GA G +GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILTDPSYTKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D+ES +GL+IR L + SN+R + +L +YL ++NI+ I D+DTR +TR LR+
Sbjct: 65 INLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYLIQQNIVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVL----STEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDF 182
G+ G + +TEE+ ++ L + S+ + G DL V+ E ++W T +W
Sbjct: 125 KGAQAGCILVGDATEENIANA--LAFANSFGSMAGKDLAQSVTCNELYKW---TDGEWQL 179
Query: 183 NTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + V+AYD+G+KHNILR LA GC++ VVP+ A L L PDG+ SN
Sbjct: 180 GKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVVPAKTSAEAVLALNPDGIFLSN 239
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP YA+ +++LL + P+FGIC+GHQLLG A G
Sbjct: 240 GPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGLAAG 279
>gi|329296593|ref|ZP_08253929.1| carbamoyl phosphate synthase small subunit [Plautia stali symbiont]
Length = 382
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + TSN+R E+L YL NI+GI D+DTR +TR
Sbjct: 62 NVGANAADEESSQIHAQGLVIRDLPLITSNFRSEESLSAYLQRNNIVGIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+L G + +S L+ ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGALNGYIIAGDSPDAALALQKAQAFPGLKGMDLAKEVTTAETYAWQQGS---WALK 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
++ + V+AYD+G K NILR L GC++ VVP+ PA E L L PDG+
Sbjct: 179 GGLPEQQSADALPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPADEVLALNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ ++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAISAIQAFLKTDIPVFGICLGHQLLALASG 280
>gi|301024777|ref|ZP_07188415.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
196-1]
gi|299880267|gb|EFI88478.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
196-1]
Length = 391
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEE Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEEFSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ EP+ W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|431929752|ref|YP_007242798.1| carbamoyl-phosphate synthase small subunit [Thioflavicoccus mobilis
8321]
gi|431828055|gb|AGA89168.1| carbamoyl-phosphate synthase, small subunit [Thioflavicoccus
mobilis 8321]
Length = 380
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 176/280 (62%), Gaps = 11/280 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++R S GA G VGEVVFNT++TGYQEIL+DPSY Q V +T PHIGNTG
Sbjct: 5 ALLALEDGSVFRGVSIGAPGESVGEVVFNTAMTGYQEILSDPSYRRQLVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE+ AGL+IR L I SNWR E L YLA + I+ I VDTR +TR LR+
Sbjct: 65 ANDEDEEAPGVQAAGLIIRDLPILPSNWRSREPLDAYLARQGIVAIAGVDTRRLTRLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G L + + + ++++ + G+DL +VS E + W E W
Sbjct: 125 KGAQSGCLQAGDGLDEATAVAAAQAFPGLKGMDLAKEVSTTERYTWTEGL---WTLEDGH 181
Query: 187 RNSKT------YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+T + V+AYD+GIK NILR L + GC++ VVP+ PA+E + L P GV SN
Sbjct: 182 PAPETDTERLPWHVVAYDYGIKRNILRMLVARGCRVTVVPAQTPAAEVMALAPHGVFLSN 241
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+A ++ELLG VP+FGIC+GHQLLG A G
Sbjct: 242 GPGDPEPCDYAIAAIRELLGAGVPLFGICLGHQLLGLAGG 281
>gi|421352096|ref|ZP_15802461.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HE-25]
gi|395952541|gb|EJH63155.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HE-25]
Length = 379
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 174/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GL IR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLAIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|261366029|ref|ZP_05978912.1| carbamoyl-phosphate synthase, small subunit [Neisseria mucosa ATCC
25996]
gi|288565373|gb|EFC86933.1| carbamoyl-phosphate synthase, small subunit [Neisseria mucosa ATCC
25996]
Length = 376
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS +E +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKARELIAAFGSMVGKDLAKEVSCQEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LA+ GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|189350061|ref|YP_001945689.1| carbamoyl phosphate synthase small subunit [Burkholderia
multivorans ATCC 17616]
gi|421480902|ref|ZP_15928495.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CF2]
gi|189334083|dbj|BAG43153.1| carbamoyl-phosphate synthase small chain [Burkholderia multivorans
ATCC 17616]
gi|400220343|gb|EJO50889.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CF2]
Length = 381
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 181/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRMERTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + S + +E++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 128 KGAQNGCI-LAGSDDAAKAIELARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQEAPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|420267355|ref|ZP_14769766.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA22]
gi|390721744|gb|EIN94438.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA22]
Length = 382
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP++ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPASCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|261491743|ref|ZP_05988323.1| carbamoyl phosphate synthase small subunit [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261495507|ref|ZP_05991954.1| carbamoyl phosphate synthase small subunit [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308841|gb|EEY10097.1| carbamoyl phosphate synthase small subunit [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261312582|gb|EEY13705.1| carbamoyl phosphate synthase small subunit [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 377
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 181/280 (64%), Gaps = 13/280 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ KS GA G +GEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 AILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILTDPSYTKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D+ES +GL+IR L + SN+R + +L +YL ++NI+ I D+DTR +TR LR+
Sbjct: 65 INLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYLIQQNIVAIADIDTRRLTRILRE 124
Query: 128 DGSLIGVL----STEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDF 182
G+ G + +TEE+ ++ L + S+ + G DL V+ E ++W T +W
Sbjct: 125 KGAQAGCILVGDATEENIANA--LAFANSFGSMAGKDLAQSVTCNELYKW---TDGEWQL 179
Query: 183 NTH--ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + V+AYD+G+KHNILR LA GC++ VVP+ A L L PDG+ SN
Sbjct: 180 GKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVVPAKTSAEAVLALNPDGIFLSN 239
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP YA+ +++LL + P+FGIC+GHQLLG A G
Sbjct: 240 GPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGLAAG 279
>gi|161525200|ref|YP_001580212.1| carbamoyl phosphate synthase small subunit [Burkholderia
multivorans ATCC 17616]
gi|160342629|gb|ABX15715.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans ATCC 17616]
Length = 380
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 181/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 7 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 VNAEDVEATKVHAAGLIIRDLPTLASNFRMERTLGDYLRDEGVVAIAGIDTRKLTRILRD 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + S + +E++RS+ + G+DL VS +PFEW ++ +W +
Sbjct: 127 KGAQNGCI-LAGSDDAAKAIELARSFPGLAGMDLAKVVSTTKPFEWKQT---EWRLGSGY 182
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNGPGD
Sbjct: 183 GMQEAPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNGPGD 242
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 243 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 278
>gi|15642387|ref|NP_232020.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121591078|ref|ZP_01678390.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
2740-80]
gi|147675544|ref|YP_001217892.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae O395]
gi|153819986|ref|ZP_01972653.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae NCTC
8457]
gi|153823337|ref|ZP_01976004.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae B33]
gi|153828809|ref|ZP_01981476.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
623-39]
gi|227082513|ref|YP_002811064.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae M66-2]
gi|227118834|ref|YP_002820730.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae O395]
gi|229507547|ref|ZP_04397052.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae BX
330286]
gi|229512257|ref|ZP_04401736.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae B33]
gi|229514021|ref|ZP_04403483.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae TMA 21]
gi|229519393|ref|ZP_04408836.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae RC9]
gi|229524377|ref|ZP_04413782.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae bv.
albensis VL426]
gi|229528622|ref|ZP_04418012.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae 12129(1)]
gi|229607053|ref|YP_002877701.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae
MJ-1236]
gi|254849512|ref|ZP_05238862.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae MO10]
gi|297581018|ref|ZP_06942943.1| carbamoyl-phosphate synthase [Vibrio cholerae RC385]
gi|298500249|ref|ZP_07010054.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae MAK
757]
gi|360036263|ref|YP_004938026.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae O1 str.
2010EL-1786]
gi|379742179|ref|YP_005334148.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae IEC224]
gi|417814406|ref|ZP_12461059.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-49A2]
gi|418335391|ref|ZP_12944300.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-06A1]
gi|418350683|ref|ZP_12955414.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-43A1]
gi|422918222|ref|ZP_16952536.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-02A1]
gi|423896718|ref|ZP_17727550.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
HC-62A1]
gi|424003357|ref|ZP_17746431.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-17A2]
gi|424028016|ref|ZP_17767617.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-69A1]
gi|424630327|ref|ZP_18068609.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-51A1]
gi|424641357|ref|ZP_18079237.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-56A1]
gi|443536117|ref|ZP_21101984.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-80A1]
gi|21759057|sp|Q9KPH8.1|CARA_VIBCH RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|9656962|gb|AAF95533.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547083|gb|EAX57219.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
2740-80]
gi|126509464|gb|EAZ72058.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae NCTC
8457]
gi|126519144|gb|EAZ76367.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae B33]
gi|146317427|gb|ABQ21966.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae O395]
gi|148875685|gb|EDL73820.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
623-39]
gi|227010401|gb|ACP06613.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae M66-2]
gi|227014284|gb|ACP10494.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae O395]
gi|229332396|gb|EEN97882.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae 12129(1)]
gi|229337958|gb|EEO02975.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae bv.
albensis VL426]
gi|229344082|gb|EEO09057.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae RC9]
gi|229349202|gb|EEO14159.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae TMA 21]
gi|229352222|gb|EEO17163.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae B33]
gi|229355052|gb|EEO19973.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae BX
330286]
gi|229369708|gb|ACQ60131.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae MJ-1236]
gi|254845217|gb|EET23631.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae MO10]
gi|297534844|gb|EFH73680.1| carbamoyl-phosphate synthase [Vibrio cholerae RC385]
gi|297540942|gb|EFH76996.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae MAK
757]
gi|340036892|gb|EGQ97868.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-49A2]
gi|341635557|gb|EGS60271.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-02A1]
gi|356416426|gb|EHH70057.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-06A1]
gi|356445179|gb|EHH97988.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-43A1]
gi|356647417|gb|AET27472.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae O1 str.
2010EL-1786]
gi|378795689|gb|AFC59160.1| carbamoyl phosphate synthase small subunit [Vibrio cholerae IEC224]
gi|408022218|gb|EKG59439.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-56A1]
gi|408053551|gb|EKG88558.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-51A1]
gi|408654006|gb|EKL25149.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae
HC-62A1]
gi|408845006|gb|EKL85127.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-17A2]
gi|408878292|gb|EKM17302.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-69A1]
gi|443460620|gb|ELT31704.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae HC-80A1]
Length = 379
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|423685185|ref|ZP_17659993.1| carbamoyl phosphate synthase small subunit [Vibrio fischeri SR5]
gi|371495686|gb|EHN71281.1| carbamoyl phosphate synthase small subunit [Vibrio fischeri SR5]
Length = 385
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ +S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGQSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +DEES GLVIR L + SN+R +TL YL +NI+GI D+DTR +TR LR
Sbjct: 64 GINSEDEESSSIHAQGLVIRDLPLLASNFRSEQTLSEYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + ++ + + G+DL +V+ E ++W + + W
Sbjct: 124 EKGAQNGCIVAGTNLDEAFAFAQAKEFPGLKGMDLAKEVTTSEAYQWKQGS---WTLTGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
K+ + V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SN
Sbjct: 181 LPEEKSDSELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPAPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|418532371|ref|ZP_13098279.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
ATCC 11996]
gi|371450602|gb|EHN63646.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
ATCC 11996]
Length = 388
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 183/286 (63%), Gaps = 13/286 (4%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N +A L L DG+++ S GA GT VGEVVFNTSLTGYQEILTDPSY Q V +T PHI
Sbjct: 6 NFPSAILALADGTVFIGNSIGAQGTTVGEVVFNTSLTGYQEILTDPSYCQQIVTLTYPHI 65
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVN +D E+ + AGL+I++L + SN+R +TL YL E + I ++DTR +TR
Sbjct: 66 GNYGVNPEDVEADKIHAAGLIIKNLPLLASNFRSTQTLSEYLIEGKTVAIANIDTRKLTR 125
Query: 124 RLR----QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
LR Q+G+++G+ + EE ++ D+ + + + G+DL VS + + W E+
Sbjct: 126 LLRDQGAQNGAIVGLAAGEEVTQARIDEAIAAAKAAPSMKGLDLAKVVSTDKSYPWTET- 184
Query: 177 KPDWDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
+W + S ++V+AYDFG+K NILR LA GC + VVP+ PA + L L PD
Sbjct: 185 --EWSLGEGYGKLESPRFKVVAYDFGVKKNILRMLAERGCDVTVVPAQTPAKDVLALNPD 242
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GV SNGPGDP YA+A V+E++ ++PVFGIC+GHQ++ A G
Sbjct: 243 GVFLSNGPGDPEPCDYAIAAVQEIMAARMPVFGICLGHQIMALASG 288
>gi|309782462|ref|ZP_07677186.1| carbamoyl-phosphate synthase, small subunit [Ralstonia sp.
5_7_47FAA]
gi|404396303|ref|ZP_10988098.1| carbamoyl-phosphate synthase small chain [Ralstonia sp. 5_2_56FAA]
gi|308918799|gb|EFP64472.1| carbamoyl-phosphate synthase, small subunit [Ralstonia sp.
5_7_47FAA]
gi|348614792|gb|EGY64331.1| carbamoyl-phosphate synthase small chain [Ralstonia sp. 5_2_56FAA]
Length = 378
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 8 AILALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+I+ L I SN+R TL +YL ++ I +DTR +TR LR+
Sbjct: 68 VNREDVEATKVHAAGLIIKDLPILASNFRKEHTLSHYLKGEKVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E Q+ +++SRS+ + G+DL VS EP+EW T+ +W
Sbjct: 128 KGAQNGCILAGEDNV-QKAIDLSRSFPGLSGMDLAKVVSVTEPYEW---TQTEWALGRGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + Y V+AYDFG+K NILR LA GC++ VVP+ A++ L PDGV SNGPGD
Sbjct: 184 GKQEAPKYHVVAYDFGVKFNILRMLAERGCRVTVVPAQTSAADVLAHNPDGVFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+A KE L ++P FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFLERRLPTFGICLGHQIMGLAVG 279
>gi|116074614|ref|ZP_01471875.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp.
RS9916]
gi|116067836|gb|EAU73589.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp.
RS9916]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 181/275 (65%), Gaps = 4/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++ + G+ G+ VGEVVFNT +TGYQE+LTDPSY+GQ V T P +GNTG
Sbjct: 10 AVLVLADGTVFEGLACGSRGSVVGEVVFNTGMTGYQEVLTDPSYSGQLVTFTYPELGNTG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D+E+ GL+ R L+ SNWRC++TL +L + ++GI+ +DTRA+ R LR
Sbjct: 70 VNAEDQEADVPHARGLIARQLAPLPSNWRCSQTLPEWLDQHGVVGIHGIDTRALVRHLRD 129
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ GV+S+ + +S Q LLE +S + G++L VS EP+ W + +D
Sbjct: 130 TGAMNGVISS-DGRSPQVLLEELKSAPSMQGLNLADRVSTAEPYTWTSACAASFDQRLKP 188
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R YRV+A DFGIK IL RL +GC++ V+P++ L +P+GV SNGPGDPS
Sbjct: 189 RPEHPYRVVAIDFGIKRAILDRLVGHGCEVTVLPASSSLETVLSHEPEGVFLSNGPGDPS 248
Query: 247 AVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
AV +A+ K+L+ +P+FGIC+GHQ+LG A+G
Sbjct: 249 AVTGGIALAKDLVEHKSLPLFGICLGHQILGLAMG 283
>gi|72382099|ref|YP_291454.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. NATL2A]
gi|72001949|gb|AAZ57751.1| carbamoyl-phosphate synthase small subunit [Prochlorococcus marinus
str. NATL2A]
Length = 384
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/277 (44%), Positives = 181/277 (65%), Gaps = 3/277 (1%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
++A L+LEDG+ + SFGA GT GEVVFNT +TGYQE++TDPSY GQ + T P IGN
Sbjct: 7 SSAILLLEDGTYFEGLSFGAVGTISGEVVFNTGMTGYQEVITDPSYYGQLITFTYPEIGN 66
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
TGVN++D ES + G++ R +S SNWR + N+L + ++GI+ +DTR++ R +
Sbjct: 67 TGVNYEDNESSHPSVKGVIARQISKTPSNWRHEISFENWLNDEKVVGIHGIDTRSLVRHI 126
Query: 126 RQDGSLIGVLSTEESKSDQELLE-MSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
R+ GSL G++S+E S EL + +S + G++L+ V+ K F S +D
Sbjct: 127 RESGSLNGIISSESKYSIAELFSLLKKSPSMSGLNLVDKVTTKRAFNANSSCPVAFDMRI 186
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y+V+A DFGIK +IL RL ++GC++ V+P++ ++ L L P+GV SNGPGD
Sbjct: 187 KNTQTIPYKVVAIDFGIKQSILDRLVAHGCEVTVLPASAEMTDVLALSPEGVFLSNGPGD 246
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
PS V + + K+L+ K+PVFGIC+GHQ+LG ALG
Sbjct: 247 PSTVHSGINLAKDLIEYKKLPVFGICLGHQILGLALG 283
>gi|229521222|ref|ZP_04410642.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae TM
11079-80]
gi|229341754|gb|EEO06756.1| carbamoyl-phosphate synthase small chain [Vibrio cholerae TM
11079-80]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMVGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|161830547|ref|YP_001597135.1| carbamoyl phosphate synthase small subunit [Coxiella burnetii RSA
331]
gi|161762414|gb|ABX78056.1| carbamoyl-phosphate synthase, small subunit [Coxiella burnetii RSA
331]
Length = 382
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 175/275 (63%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 13 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 72
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ + AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 73 VNMDDQESRRIWAAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 132
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 133 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 189
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 190 HASSRAYQVVVYDFGLKQQILRLLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 249
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 250 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 284
>gi|350562024|ref|ZP_08930861.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780342|gb|EGZ34677.1| carbamoyl-phosphate synthase, small subunit [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 377
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 173/276 (62%), Gaps = 2/276 (0%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
A A LVLEDG+++ +S GA+G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGN
Sbjct: 3 APAVLVLEDGTVFHGQSVGAAGETVGEVVFNTSMTGYQEILTDPSYARQIVTLTYPHIGN 62
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
G +D+ES + AGL++R + SNWR E+L ++L ++ I +DTR +TR L
Sbjct: 63 VGTTPEDDESAKVHAAGLIVRDVPPLVSNWRSRESLPDFLMRHGVVAIAGIDTRRLTRIL 122
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST-KPDWDFNT 184
R+ G+ L E + + L + I G+DL +VS +EW++ + D
Sbjct: 123 REKGAQNACLQGGEVDTGRALEQARAFPGIKGMDLAREVSTANRYEWLDGPWRLDGPAPQ 182
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFGIKHNILR L GC++ VVP+ PA + L L+PDG+ SNGPGD
Sbjct: 183 LPPDQAEFHVVAYDFGIKHNILRMLVGRGCRVTVVPAETPADDALALEPDGIFLSNGPGD 242
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+A ++ K PVFGIC+GHQLLG A G
Sbjct: 243 PEPCDYAIATIRRFCAEKRPVFGICLGHQLLGLASG 278
>gi|268683510|ref|ZP_06150372.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
SK-92-679]
gi|268623794|gb|EEZ56194.1| carbamoyl-phosphate synthase subunit small [Neisseria gonorrhoeae
SK-92-679]
Length = 377
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNAG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + S++R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYLVRNETVAIADIDTRRLTMLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W+
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTETYEWTEG---EWELGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMESGK-PIFGICLGHQLISLAIG 277
>gi|417950599|ref|ZP_12593717.1| carbamoyl phosphate synthase small subunit [Vibrio splendidus ATCC
33789]
gi|342806061|gb|EGU41299.1| carbamoyl phosphate synthase small subunit [Vibrio splendidus ATCC
33789]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 177/280 (63%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ ++ GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGEAIGAVGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLTGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|345864626|ref|ZP_08816825.1| carbamoyl-phosphate synthase small chain [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345124323|gb|EGW54204.1| carbamoyl-phosphate synthase small chain [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 381
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 179/281 (63%), Gaps = 10/281 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R +S GA G VGEVVFNT++TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SAVLVLEDGTLFRGESIGADGCSVGEVVFNTAMTGYQEILTDPSYARQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N DDEES AGLVIR L + +SNWR E L YL N++ I +DTR +TR LR
Sbjct: 64 GANEDDEESAHIHAAGLVIRDLPLLSSNWRSQEPLDAYLRRNNVVAIAGIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWV------ESTKPD 179
+ G+ G + +E+ + L ++ + + G+DL V+ P+EWV E P+
Sbjct: 124 EKGAQGGCILADEAIDEAAALAAAKDFPGLKGMDLAKQVTTDTPYEWVQGSWSLEGGMPE 183
Query: 180 WDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ E+ V+AYD+G+K NILR L GC++ VVP+ PA + L L+PDGV S
Sbjct: 184 AEHPIEEK--LPLHVVAYDYGVKRNILRMLVDRGCRLTVVPAQMPAKDVLALQPDGVFLS 241
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+ +++++ +P FGIC+GHQLL A G
Sbjct: 242 NGPGDPEPCDYAIDAIRQIVESGIPTFGICLGHQLLSLASG 282
>gi|241760776|ref|ZP_04758867.1| carbamoyl-phosphate synthase, small subunit [Neisseria flavescens
SK114]
gi|241318673|gb|EER55225.1| carbamoyl-phosphate synthase, small subunit [Neisseria flavescens
SK114]
Length = 375
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/277 (47%), Positives = 177/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESGSVYAAGLIIRDLPLLHSNFRASESLHDYLVHNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS KE +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCKEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LAS GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLASRGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|340361016|ref|ZP_08683461.1| carbamoyl-phosphate synthase, small subunit [Neisseria macacae ATCC
33926]
gi|339889132|gb|EGQ78528.1| carbamoyl-phosphate synthase, small subunit [Neisseria macacae ATCC
33926]
Length = 376
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 177/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + + ++ E+ ++ +VG DL +VS KE +EW E +W
Sbjct: 125 KGAQGGAILAGADATVEKAQELIAAFGSMVGKDLAKEVSCKEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LA+ GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCDYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|37678808|ref|NP_933417.1| carbamoyl phosphate synthase small subunit [Vibrio vulnificus
YJ016]
gi|60389706|sp|Q7MNU1.1|CARA_VIBVY RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|37197549|dbj|BAC93388.1| carbamoylphosphate synthase small subunit [Vibrio vulnificus YJ016]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTTSEDEESSSIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP+ YA+ K L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPAPCTYAIEATKVFLEKGLPVFGICLGHQILALASG 280
>gi|293392913|ref|ZP_06637230.1| carbamoyl-phosphate synthase, small subunit [Serratia odorifera DSM
4582]
gi|291424447|gb|EFE97659.1| carbamoyl-phosphate synthase, small subunit [Serratia odorifera DSM
4582]
Length = 391
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES GLVIR L + SN+RC E L YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNASDAESSAVHAQGLVIRDLPLIASNYRCEEGLSEYLKRNNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ +E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDAPDAALALEKAKAFPGLKGMDLAKEVTTQEAYAWQQGS---WTLE 187
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+ PA+E LK+ PDG+
Sbjct: 188 GELPEAKDAAALPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAAEVLKMAPDGIFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPEPCDYAIDAIKQFLDTDIPVFGICLGHQLLALASG 289
>gi|343509779|ref|ZP_08747041.1| carbamoyl phosphate synthase small subunit [Vibrio scophthalmi LMG
19158]
gi|342803576|gb|EGU38926.1| carbamoyl phosphate synthase small subunit [Vibrio scophthalmi LMG
19158]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFSGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLTGGL 181
Query: 184 --THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPAPCTYAIEATKVFLEKNIPLFGICLGHQILALASG 280
>gi|389774843|ref|ZP_10192962.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter
spathiphylli B39]
gi|388438442|gb|EIL95197.1| carbamoyl-phosphate synthase small subunit [Rhodanobacter
spathiphylli B39]
Length = 378
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 179/274 (65%), Gaps = 3/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++ + GA+G VGEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLALEDGSVFHGHAVGATGETVGEVVFNTAMTGYQEILTDPSYSRQVVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES AGL++R + S+WR E+L +YL + I +DTR +TR LR
Sbjct: 65 INAEDVESTAVHAAGLIVRDVPRRASSWRSTESLPDYLKRHGTVAIAGIDTRRLTRILRD 124
Query: 128 DGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G +++ E+ ++ L + + G+DL VS + + W + D D
Sbjct: 125 KGALAGCIMAGEQVDAEAALAKARAFPGLNGMDLAKVVSTAKAYVWNQGVY-DLDRAAFN 183
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + ++V+AYDFG K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+
Sbjct: 184 QPALRFKVVAYDFGSKLNILRLLAEQGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPA 243
Query: 247 AVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
A YA+A + LL K+P+FGIC+GHQL+G ALG
Sbjct: 244 ACDYAIAATRTLLDAKIPLFGICLGHQLMGLALG 277
>gi|365538528|ref|ZP_09363703.1| carbamoyl phosphate synthase small subunit [Vibrio ordalii ATCC
33509]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R +L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNQLSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIMAGDHLDEALALVKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L LKPDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALKPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|22219402|pdb|1M6V|B Chain B, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
gi|22219404|pdb|1M6V|D Chain D, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
gi|22219406|pdb|1M6V|F Chain F, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
gi|22219408|pdb|1M6V|H Chain H, Crystal Structure Of The G359f (Small Subunit) Point
Mutant Of Carbamoyl Phosphate Synthetase
Length = 382
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 183 ----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|212212331|ref|YP_002303267.1| carbamoyl phosphate synthase small subunit [Coxiella burnetii
CbuG_Q212]
gi|212010741|gb|ACJ18122.1| carbamoyl-phosphate synthase small chain [Coxiella burnetii
CbuG_Q212]
Length = 402
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 175/275 (63%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 33 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 92
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ + AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 93 VNMDDQESRRIWAAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 152
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 153 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 209
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 210 HASSRAYQVVVYDFGLKQQILRLLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 269
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 270 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 304
>gi|209364055|ref|YP_001424723.2| carbamoyl phosphate synthase small subunit [Coxiella burnetii
Dugway 5J108-111]
gi|207081988|gb|ABS78436.2| carbamoyl-phosphate synthase small chain [Coxiella burnetii Dugway
5J108-111]
Length = 402
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 175/275 (63%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 33 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 92
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ + AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 93 VNMDDQESRRIWAAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 152
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 153 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 209
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 210 HASSRAYQVVVYDFGLKQQILRLLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 269
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 270 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 304
>gi|21231289|ref|NP_637206.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66768659|ref|YP_243421.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. campestris str. 8004]
gi|21759019|sp|P58896.1|CARA_XANCP RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|21112942|gb|AAM41130.1| carbamoyl-phosphate synthase small chain [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66573991|gb|AAY49401.1| carbamoyl-phosphate synthase small chain [Xanthomonas campestris
pv. campestris str. 8004]
Length = 375
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/273 (46%), Positives = 177/273 (64%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N D+E++Q + AGL++R + S+WR L +L R ++ I +DTR +TR LR+
Sbjct: 65 FNDQDDEAKQVWAAGLIVRDVPRRPSSWRNQVALPAWLQTRGVVAISGIDTRKLTRLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L + + G+DL VS + ++W E + D + N +
Sbjct: 125 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTETTYQWQEG-QLDLNANAFVQ 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++V+AYD+G+K NILR LA GC + VVP+ P +E L ++PDGV SNGPGDP
Sbjct: 184 AELKFKVVAYDYGVKINILRMLAERGCDVTVVPARTPVAEVLAMQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA++ ++EL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAISAIQELIAKKVPTFGICLGHQLLALAAG 276
>gi|334133952|ref|ZP_08507487.1| carbamoyl-phosphate synthase, small subunit [Paenibacillus sp.
HGF7]
gi|333608460|gb|EGL19757.1| carbamoyl-phosphate synthase, small subunit [Paenibacillus sp.
HGF7]
Length = 392
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/274 (48%), Positives = 174/274 (63%), Gaps = 17/274 (6%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
A ARL+LEDG+++ KSFGA G VGEVVFNT +TGYQE+L+DPSY GQ V MT P IGN
Sbjct: 3 AKARLLLEDGTLFTGKSFGAEGDSVGEVVFNTGITGYQEVLSDPSYCGQIVTMTYPLIGN 62
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
G++ DD ES + F+ G V+R SNWR TLGN L E I+GI D+DTR +TR++
Sbjct: 63 YGISRDDFESVRPFVHGFVVRRHEEAPSNWRAQYTLGNLLKEYGIIGISDIDTRMLTRKI 122
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
R G + G+L+T + +S +EL EM ++ ++ +S VS F + +
Sbjct: 123 RHHGVMKGLLTTSD-RSVEELKEMLQTTPLMTTQ-VSTVSTPHVFSAPGNRE-------- 172
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
RV+ DFG K I+R L GC ++VVP A + ++L PDGVL SNGPGDP
Sbjct: 173 -------RVVLVDFGAKSGIVRDLTKRGCDVVVVPQDSTAEQIMRLAPDGVLLSNGPGDP 225
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
VP+AV V++LLG+VPVFGIC+GHQL A G
Sbjct: 226 KDVPHAVETVRQLLGQVPVFGICLGHQLFALACG 259
>gi|82775434|ref|YP_401781.1| carbamoyl phosphate synthase small subunit [Shigella dysenteriae
Sd197]
gi|309787313|ref|ZP_07681925.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
1617]
gi|81239582|gb|ABB60292.1| carbamoyl-phosphate synthetase, glutamine subunit [Shigella
dysenteriae Sd197]
gi|308924891|gb|EFP70386.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
1617]
Length = 382
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRTIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WKLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|343517230|ref|ZP_08754239.1| carbamoyl phosphate synthase small subunit [Vibrio sp. N418]
gi|342794152|gb|EGU29934.1| carbamoyl phosphate synthase small subunit [Vibrio sp. N418]
Length = 379
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFSGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLTGGL 181
Query: 184 --THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP+ YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPAPCTYAIEATKVFLEKNIPLFGICLGHQILALASG 280
>gi|192361439|ref|YP_001983146.1| carbamoyl-phosphate synthase small subunit [Cellvibrio japonicus
Ueda107]
gi|190687604|gb|ACE85282.1| carbamoyl-phosphate synthase, small subunit [Cellvibrio japonicus
Ueda107]
Length = 400
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 175/278 (62%), Gaps = 8/278 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DGS++R + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 26 KAILVLADGSVFRGTAIGAEGLSVGEVVFNTAITGYQEILTDPSYAQQIVTLTYPHIGNT 85
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE + + GLVIR L + SN+R E+L +YL R+++GI D+DTR +TR LR
Sbjct: 86 GTNREDEECERIWATGLVIRDLPLLASNFRNQESLSDYLKARHVIGIADIDTRRLTRILR 145
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ G L + + + L + ++ + G+DL +V+ E + W ES+ W
Sbjct: 146 DKGAQNGCLMAGDDVDEAKALAAANAFGGLKGLDLAKEVTVSESYPWNESS---WSLTEG 202
Query: 186 ER---NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
R K + V+AYDFG+K NILR LA C + VVP+ A+E L + PDG+ SNGP
Sbjct: 203 HRVLDGKKAFNVVAYDFGVKRNILRMLADRDCNLTVVPAKTSAAEVLAMNPDGIFLSNGP 262
Query: 243 GDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 263 GDPEPCTYAIEAIKAFLETDIPVFGICLGHQLLALASG 300
>gi|425073734|ref|ZP_18476840.1| carbamoyl-phosphate synthase small chain [Proteus mirabilis WGLW4]
gi|404595005|gb|EKA95560.1| carbamoyl-phosphate synthase small chain [Proteus mirabilis WGLW4]
Length = 387
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 174/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + +S GA G +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTEFHGRSIGAEGAAIGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
NTGVN D+ES GL+IR L + SN+R E+L +YL I+ I D+DTR +TR
Sbjct: 62 NTGVNSSDKESATIHAQGLIIRDLPLVMSNYRAEESLADYLKRHQIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL V+ ++P++W + + W
Sbjct: 122 LREKGAQNGCIIAGTHLDAKQALEKAKAFPGLKGMDLAKTVTVEQPYQWTQGS---WTLK 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T V+AYDFG+K NILR L GC++ VVP+ A E L L PDG+
Sbjct: 179 GELPATQSPQDLPLHVVAYDFGVKRNILRMLVDRGCRVTVVPAQTSAQEVLALSPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ AI L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIDAIQTFLTTDIPVFGICLGHQLLALASG 280
>gi|170021610|ref|YP_001726564.1| carbamoyl phosphate synthase small subunit [Escherichia coli ATCC
8739]
gi|387610509|ref|YP_006113625.1| carbamoyl-phosphate synthase small subunit [Escherichia coli ETEC
H10407]
gi|417263388|ref|ZP_12050797.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
2.3916]
gi|417277999|ref|ZP_12065319.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
3.2303]
gi|417632503|ref|ZP_12282727.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_S1191]
gi|418300919|ref|ZP_12912713.1| carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate
synthetase glutamine chain) [Escherichia coli UMNF18]
gi|419140392|ref|ZP_13685152.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC6A]
gi|419157280|ref|ZP_13701812.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC6D]
gi|419167444|ref|ZP_13711885.1| carA [Escherichia coli DEC6E]
gi|419811597|ref|ZP_14336471.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O32:H37 str. P4]
gi|422768284|ref|ZP_16822009.1| carbamoyl-phosphate synthase [Escherichia coli E1520]
gi|422816051|ref|ZP_16864266.1| carbamoyl-phosphate synthase small chain [Escherichia coli M919]
gi|425281360|ref|ZP_18672491.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TW00353]
gi|432414990|ref|ZP_19657627.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE44]
gi|432625595|ref|ZP_19861584.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE77]
gi|432659303|ref|ZP_19894968.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE111]
gi|432683916|ref|ZP_19919239.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE156]
gi|432702579|ref|ZP_19937711.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE171]
gi|432879293|ref|ZP_20096320.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE154]
gi|432952430|ref|ZP_20145436.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE197]
gi|169756538|gb|ACA79237.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli ATCC
8739]
gi|309700245|emb|CBI99533.1| carbamoyl-phosphate synthase small chain [Escherichia coli ETEC
H10407]
gi|323935084|gb|EGB31451.1| carbamoyl-phosphate synthase [Escherichia coli E1520]
gi|339413017|gb|AEJ54689.1| carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate
synthetase glutamine chain) [Escherichia coli UMNF18]
gi|345392021|gb|EGX21807.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_S1191]
gi|378000909|gb|EHV63971.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC6A]
gi|378005029|gb|EHV68038.1| carA [Escherichia coli DEC6E]
gi|378015951|gb|EHV78841.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC6D]
gi|385155641|gb|EIF17643.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O32:H37 str. P4]
gi|385540450|gb|EIF87271.1| carbamoyl-phosphate synthase small chain [Escherichia coli M919]
gi|386222751|gb|EII45165.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
2.3916]
gi|386239409|gb|EII76339.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
3.2303]
gi|408206796|gb|EKI31562.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TW00353]
gi|430945172|gb|ELC65252.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE44]
gi|431165947|gb|ELE66274.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE77]
gi|431204125|gb|ELF02698.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE111]
gi|431225834|gb|ELF23020.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE156]
gi|431247980|gb|ELF42189.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE171]
gi|431415091|gb|ELG97641.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE154]
gi|431473778|gb|ELH53611.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE197]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|3318818|pdb|1JDB|C Chain C, Carbamoyl Phosphate Synthetase From Escherichia Coli
gi|3318822|pdb|1JDB|F Chain F, Carbamoyl Phosphate Synthetase From Escherichia Coli
gi|3318826|pdb|1JDB|I Chain I, Carbamoyl Phosphate Synthetase From Escherichia Coli
gi|3318830|pdb|1JDB|L Chain L, Carbamoyl Phosphate Synthetase From Escherichia Coli
gi|4929936|pdb|1BXR|B Chain B, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
gi|4929938|pdb|1BXR|D Chain D, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
gi|4929940|pdb|1BXR|F Chain F, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
gi|4929942|pdb|1BXR|H Chain H, Structure Of Carbamoyl Phosphate Synthetase Complexed With
The Atp Analog Amppnp
gi|5821977|pdb|1CE8|B Chain B, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
gi|5821979|pdb|1CE8|D Chain D, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
gi|5821981|pdb|1CE8|F Chain F, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
gi|5821983|pdb|1CE8|H Chain H, Carbamoyl Phosphate Synthetase From Escherichis Coli With
Complexed With The Allosteric Ligand Imp
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 183 ----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|30061600|ref|NP_835771.1| carbamoyl phosphate synthase small subunit [Shigella flexneri 2a
str. 2457T]
gi|56479588|ref|NP_705988.2| carbamoyl phosphate synthase small subunit [Shigella flexneri 2a
str. 301]
gi|110804099|ref|YP_687619.1| carbamoyl phosphate synthase small subunit [Shigella flexneri 5
str. 8401]
gi|384541609|ref|YP_005725670.1| Carbamoyl-phosphate synthetase, glutamine (Small) subunit [Shigella
flexneri 2002017]
gi|417726372|ref|ZP_12375122.1| carbamoyl-phosphate synthase small chain [Shigella flexneri K-671]
gi|417731525|ref|ZP_12380200.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
2747-71]
gi|417826101|ref|ZP_12472684.1| carA [Shigella flexneri J1713]
gi|424836567|ref|ZP_18261204.1| carbamoyl phosphate synthase small subunit [Shigella flexneri 5a
str. M90T]
gi|30039842|gb|AAP15576.1| carbamoyl-phosphate synthetase, glutamine (small) subunit [Shigella
flexneri 2a str. 2457T]
gi|56383139|gb|AAN41695.2| carbamoyl-phosphate synthetase, glutamine (small) subunit [Shigella
flexneri 2a str. 301]
gi|110613647|gb|ABF02314.1| carbamoyl-phosphate synthetase, glutamine (small) subunit [Shigella
flexneri 5 str. 8401]
gi|281599393|gb|ADA72377.1| Carbamoyl-phosphate synthetase, glutamine (Small) subunit [Shigella
flexneri 2002017]
gi|332762296|gb|EGJ92563.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
2747-71]
gi|332764873|gb|EGJ95101.1| carbamoyl-phosphate synthase small chain [Shigella flexneri K-671]
gi|335578481|gb|EGM63697.1| carA [Shigella flexneri J1713]
gi|383465619|gb|EID60640.1| carbamoyl phosphate synthase small subunit [Shigella flexneri 5a
str. M90T]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|375264456|ref|YP_005021899.1| carbamoyl phosphate synthase small subunit [Vibrio sp. EJY3]
gi|369839780|gb|AEX20924.1| carbamoyl phosphate synthase small subunit [Vibrio sp. EJY3]
Length = 379
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 174/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGVSIGADGVSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TTSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + +S + L ++ + + G+DL V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGDSLDEALALAKAKEFPGLKGMDLAKVVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|432791263|ref|ZP_20025360.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE78]
gi|432797233|ref|ZP_20031262.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE79]
gi|431342931|gb|ELG29901.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE78]
gi|431346447|gb|ELG33352.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE79]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|430762397|ref|YP_007218254.1| Carbamoyl-phosphate synthase small chain [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430012021|gb|AGA34773.1| Carbamoyl-phosphate synthase small chain [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 377
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 178/277 (64%), Gaps = 4/277 (1%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
A A LVLEDG+++ +S GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGN
Sbjct: 3 APAVLVLEDGTVFHGQSVGAVGETVGEVVFNTAMTGYQEILTDPSYARQIVTLTYPHIGN 62
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
G +D+ES + AGL++R + SNWR E+L +YL ++ I +DTR +TR L
Sbjct: 63 VGTTSEDDESTRVHAAGLIVRDVPPLVSNWRSRESLPDYLMRHGVVAIAGIDTRRLTRIL 122
Query: 126 RQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDFN 183
R+ G+ G L E +++ LE +R++ I G+DL +VS +EW++ + D
Sbjct: 123 REKGAQNGCLQGGEVDAERA-LEQARAFPGIKGMDLAREVSTANRYEWLDGPWRLDGPPP 181
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYDFGIKHNILR L GC++ VVP+ PA + L L+PDG+ SNGPG
Sbjct: 182 RLKPDEAEFHVVAYDFGIKHNILRMLVGRGCRVTVVPAETPAEDALALEPDGIFLSNGPG 241
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+ ++ K PVFGIC+GHQLLG A G
Sbjct: 242 DPEPCAYAIESIRRFCEKRRPVFGICLGHQLLGLASG 278
>gi|422010103|ref|ZP_16357085.1| carbamoyl phosphate synthase small subunit [Providencia rettgeri
Dmel1]
gi|414092276|gb|EKT53955.1| carbamoyl phosphate synthase small subunit [Providencia rettgeri
Dmel1]
Length = 387
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES GL+IR L + SN+R + L YL N++ I D+DTR +TR
Sbjct: 62 NVGTNADDEESPNVHAQGLIIRDLPLVYSNFRGQKGLSEYLKRHNVVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +RS+ + G+DL +V KE + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDVALALEKARSFSGLNGLDLAKEVCTKEIYNWSQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
++ +KT V+AYDFG K NILR L GC++ VVP+T PA L + PDG+
Sbjct: 179 NGQQGAKTADELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ ++ L ++PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIKAIETFLTTEIPVFGICLGHQLLALASG 280
>gi|366159521|ref|ZP_09459383.1| carbamoyl phosphate synthase small subunit [Escherichia sp.
TW09308]
gi|432374962|ref|ZP_19617985.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE11]
gi|430892220|gb|ELC14712.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE11]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLA 178
Query: 183 ----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|215919155|ref|NP_820275.2| carbamoyl phosphate synthase small subunit [Coxiella burnetii RSA
493]
gi|206584039|gb|AAO90789.2| carbamoyl-phosphate synthase small chain [Coxiella burnetii RSA
493]
Length = 402
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 175/275 (63%), Gaps = 6/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGS+ S GA G VGEV+FNT+LTGYQEILTDPSYA Q + T PHIGN G
Sbjct: 33 AILALADGSVLYGYSIGADGQTVGEVIFNTTLTGYQEILTDPSYAEQIITFTYPHIGNVG 92
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+ESR+ + AGL+IR LS SNWR + L +YL I+GI +DTR + R +R+
Sbjct: 93 VNMDDQESRRIWAAGLIIRELSPIVSNWRAQQALSDYLKSEEIIGIAGIDTRRLVRLIRE 152
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNTH 185
G+L G + + ++ L+ +R+++ + G DL VS W E + W+ +
Sbjct: 153 KGALHGCIVAGDGAQAEQALKKARAYEGLKGKDLAKAVSTTRAQTWQERS---WNQASAP 209
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+S+ Y+V+ YDFG+K ILR L GC + +VP+ E + LKPDGV+FSNGPGDP
Sbjct: 210 HASSRAYQVVVYDFGLKQQILRLLVDQGCLVTIVPAETNVEEVIALKPDGVVFSNGPGDP 269
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
+A YA+A +++ L K VP+ GIC+G QLL A G
Sbjct: 270 AACDYAIATIRQFLEKGVPLLGICLGFQLLALACG 304
>gi|15799714|ref|NP_285726.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. EDL933]
gi|15829289|ref|NP_308062.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. Sakai]
gi|16128026|ref|NP_414573.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|74310650|ref|YP_309069.1| carbamoyl phosphate synthase small subunit [Shigella sonnei Ss046]
gi|82542648|ref|YP_406595.1| carbamoyl phosphate synthase small subunit [Shigella boydii Sb227]
gi|157158284|ref|YP_001461201.1| carbamoyl phosphate synthase small subunit [Escherichia coli
E24377A]
gi|157159500|ref|YP_001456818.1| carbamoyl phosphate synthase small subunit [Escherichia coli HS]
gi|168751712|ref|ZP_02776734.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4113]
gi|168756858|ref|ZP_02781865.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4401]
gi|168762794|ref|ZP_02787801.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4501]
gi|168766722|ref|ZP_02791729.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4486]
gi|168776950|ref|ZP_02801957.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4196]
gi|168781731|ref|ZP_02806738.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4076]
gi|168785085|ref|ZP_02810092.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC869]
gi|168801915|ref|ZP_02826922.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC508]
gi|170079695|ref|YP_001729015.1| carbamoyl phosphate synthase small subunit [Escherichia coli str.
K-12 substr. DH10B]
gi|187733195|ref|YP_001878856.1| carbamoyl phosphate synthase small subunit [Shigella boydii CDC
3083-94]
gi|188492481|ref|ZP_02999751.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
53638]
gi|191168894|ref|ZP_03030665.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli B7A]
gi|193066213|ref|ZP_03047266.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli E22]
gi|193070984|ref|ZP_03051913.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
E110019]
gi|194429863|ref|ZP_03062375.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli B171]
gi|194434557|ref|ZP_03066815.1| carbamoyl-phosphate synthase, small subunit [Shigella dysenteriae
1012]
gi|194439686|ref|ZP_03071756.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
101-1]
gi|195937705|ref|ZP_03083087.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208807388|ref|ZP_03249725.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4206]
gi|208812824|ref|ZP_03254153.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4045]
gi|208818334|ref|ZP_03258654.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4042]
gi|209399889|ref|YP_002268639.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. EC4115]
gi|217326538|ref|ZP_03442622.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. TW14588]
gi|218552616|ref|YP_002385529.1| carbamoyl phosphate synthase small subunit [Escherichia coli IAI1]
gi|218693503|ref|YP_002401170.1| carbamoyl phosphate synthase small subunit [Escherichia coli 55989]
gi|238899437|ref|YP_002925233.1| carbamoyl phosphate synthase small subunit [Escherichia coli
BW2952]
gi|251783599|ref|YP_002997903.1| carA, subunit of carbamoyl phosphate synthetase [Escherichia coli
BL21(DE3)]
gi|253774935|ref|YP_003037766.1| carbamoyl phosphate synthase small subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160158|ref|YP_003043266.1| carbamoyl phosphate synthase small subunit [Escherichia coli B str.
REL606]
gi|254286961|ref|YP_003052709.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
BL21(DE3)]
gi|254791168|ref|YP_003076005.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. TW14359]
gi|260842269|ref|YP_003220047.1| carbamoyl phosphate synthetase small subunit [Escherichia coli
O103:H2 str. 12009]
gi|260853242|ref|YP_003227133.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. 11368]
gi|260866182|ref|YP_003232584.1| carbamoyl phosphate synthetase small subunit [Escherichia coli
O111:H- str. 11128]
gi|261226790|ref|ZP_05941071.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255193|ref|ZP_05947726.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. FRIK966]
gi|291280855|ref|YP_003497673.1| carbamoylphosphate synthase small subunit [Escherichia coli O55:H7
str. CB9615]
gi|297519222|ref|ZP_06937608.1| carbamoyl phosphate synthase small subunit [Escherichia coli OP50]
gi|307311515|ref|ZP_07591157.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli W]
gi|331661398|ref|ZP_08362322.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA143]
gi|331666265|ref|ZP_08367146.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA271]
gi|378714625|ref|YP_005279518.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
KO11FL]
gi|383176623|ref|YP_005454628.1| carbamoyl phosphate synthase small subunit [Shigella sonnei 53G]
gi|386597070|ref|YP_006093470.1| carbamoyl-phosphate synthase small subunit [Escherichia coli DH1]
gi|386607340|ref|YP_006122826.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli W]
gi|386612194|ref|YP_006131860.1| carbamoyl-phosphate synthase, small subunit CarA [Escherichia coli
UMNK88]
gi|386698535|ref|YP_006162372.1| carbamoyl phosphate synthase small subunit [Escherichia coli
KO11FL]
gi|386707765|ref|YP_006171486.1| carbamoyl phosphate synthase small subunit [Escherichia coli W]
gi|387504965|ref|YP_006157221.1| carbamoyl phosphate synthase small subunit [Escherichia coli O55:H7
str. RM12579]
gi|387605513|ref|YP_006094369.1| carbamoyl-phosphate synthase small subunit [Escherichia coli 042]
gi|387619804|ref|YP_006127431.1| carbamoyl-phosphate synthase [Escherichia coli DH1]
gi|387880591|ref|YP_006310893.1| carbamoyl phosphate synthase small subunit [Escherichia coli
Xuzhou21]
gi|388476154|ref|YP_488338.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli str. K-12 substr.
W3110]
gi|407467492|ref|YP_006786066.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483792|ref|YP_006780941.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410484332|ref|YP_006771878.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|415823837|ref|ZP_11512212.1| carbamoyl-phosphate synthase small chain [Escherichia coli OK1180]
gi|415832364|ref|ZP_11517817.1| carbamoyl-phosphate synthase small chain [Escherichia coli OK1357]
gi|416284998|ref|ZP_11647538.1| Carbamoyl-phosphate synthase small chain [Shigella boydii ATCC
9905]
gi|416295742|ref|ZP_11651250.1| Carbamoyl-phosphate synthase small chain [Shigella flexneri CDC
796-83]
gi|416309213|ref|ZP_11655666.1| Carbamoyl-phosphate synthase small chain [Escherichia coli O157:H7
str. 1044]
gi|416319092|ref|ZP_11661644.1| Carbamoyl-phosphate synthase small chain [Escherichia coli O157:H7
str. EC1212]
gi|416325979|ref|ZP_11666303.1| Carbamoyl-phosphate synthase small chain [Escherichia coli O157:H7
str. 1125]
gi|416343070|ref|ZP_11677074.1| Carbamoyl-phosphate synthase small chain [Escherichia coli EC4100B]
gi|416773248|ref|ZP_11873526.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. G5101]
gi|416784919|ref|ZP_11878395.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H- str. 493-89]
gi|416795691|ref|ZP_11883233.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H- str. H 2687]
gi|416807721|ref|ZP_11888060.1| carbamoyl phosphate synthase small subunit [Escherichia coli O55:H7
str. 3256-97]
gi|416818869|ref|ZP_11892939.1| carbamoyl phosphate synthase small subunit [Escherichia coli O55:H7
str. USDA 5905]
gi|416828205|ref|ZP_11897804.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|417112135|ref|ZP_11964258.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
1.2741]
gi|417126708|ref|ZP_11974262.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
97.0246]
gi|417135737|ref|ZP_11980522.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
5.0588]
gi|417151409|ref|ZP_11990936.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
1.2264]
gi|417157741|ref|ZP_11995365.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
96.0497]
gi|417160009|ref|ZP_11996928.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
99.0741]
gi|417176559|ref|ZP_12006355.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
3.2608]
gi|417191490|ref|ZP_12013780.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
4.0522]
gi|417216522|ref|ZP_12023194.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
JB1-95]
gi|417224200|ref|ZP_12027491.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
96.154]
gi|417230429|ref|ZP_12032015.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
5.0959]
gi|417245655|ref|ZP_12039183.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
9.0111]
gi|417252808|ref|ZP_12044567.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
4.0967]
gi|417269754|ref|ZP_12057114.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
3.3884]
gi|417273702|ref|ZP_12061047.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
2.4168]
gi|417295467|ref|ZP_12082720.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
900105 (10e)]
gi|417605954|ref|ZP_12256488.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_DG131-3]
gi|417626757|ref|ZP_12277038.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_H.1.8]
gi|417631945|ref|ZP_12282171.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_MHI813]
gi|417642547|ref|ZP_12292666.1| carbamoyl-phosphate synthase small chain [Escherichia coli TX1999]
gi|417670162|ref|ZP_12319691.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_O31]
gi|417687793|ref|ZP_12337046.1| carbamoyl-phosphate synthase small chain [Shigella boydii 5216-82]
gi|417803372|ref|ZP_12450412.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. LB226692]
gi|417831130|ref|ZP_12477660.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|417946474|ref|ZP_12589691.1| carbamoyl phosphate synthase small subunit [Escherichia coli
XH140A]
gi|417976056|ref|ZP_12616852.1| carbamoyl phosphate synthase small subunit [Escherichia coli XH001]
gi|418261442|ref|ZP_12883436.1| carA [Shigella sonnei str. Moseley]
gi|419048439|ref|ZP_13595364.1| carA [Escherichia coli DEC3A]
gi|419054674|ref|ZP_13601535.1| carA [Escherichia coli DEC3C]
gi|419060236|ref|ZP_13607024.1| carA [Escherichia coli DEC3D]
gi|419066063|ref|ZP_13612754.1| carA [Escherichia coli DEC3E]
gi|419073146|ref|ZP_13618722.1| carA [Escherichia coli DEC3F]
gi|419083782|ref|ZP_13629219.1| carA [Escherichia coli DEC4A]
gi|419089791|ref|ZP_13635135.1| carA [Escherichia coli DEC4B]
gi|419095396|ref|ZP_13640665.1| carA [Escherichia coli DEC4C]
gi|419101297|ref|ZP_13646478.1| carA [Escherichia coli DEC4D]
gi|419107073|ref|ZP_13652186.1| carA [Escherichia coli DEC4E]
gi|419112516|ref|ZP_13657561.1| carA [Escherichia coli DEC4F]
gi|419118357|ref|ZP_13663345.1| carA [Escherichia coli DEC5B]
gi|419124064|ref|ZP_13668974.1| carA [Escherichia coli DEC5C]
gi|419129590|ref|ZP_13674449.1| carA [Escherichia coli DEC5D]
gi|419139989|ref|ZP_13684773.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC5E]
gi|419167997|ref|ZP_13712398.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC7A]
gi|419179047|ref|ZP_13722674.1| carA [Escherichia coli DEC7C]
gi|419184505|ref|ZP_13728031.1| carA [Escherichia coli DEC7D]
gi|419189768|ref|ZP_13733241.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC7E]
gi|419194981|ref|ZP_13738396.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC8A]
gi|419206970|ref|ZP_13750101.1| carA [Escherichia coli DEC8C]
gi|419219237|ref|ZP_13762198.1| carA [Escherichia coli DEC8E]
gi|419224664|ref|ZP_13767560.1| carA [Escherichia coli DEC9A]
gi|419235770|ref|ZP_13778526.1| carA [Escherichia coli DEC9B]
gi|419246753|ref|ZP_13789376.1| carA [Escherichia coli DEC9D]
gi|419246823|ref|ZP_13789443.1| carA [Escherichia coli DEC9E]
gi|419252659|ref|ZP_13795211.1| carA [Escherichia coli DEC10A]
gi|419258603|ref|ZP_13801067.1| carA [Escherichia coli DEC10B]
gi|419275964|ref|ZP_13818242.1| carA [Escherichia coli DEC10D]
gi|419276128|ref|ZP_13818401.1| carA [Escherichia coli DEC10E]
gi|419281655|ref|ZP_13823880.1| carA [Escherichia coli DEC10F]
gi|419292699|ref|ZP_13834777.1| carA [Escherichia coli DEC11A]
gi|419298018|ref|ZP_13840046.1| carA [Escherichia coli DEC11B]
gi|419298211|ref|ZP_13840237.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC11C]
gi|419304534|ref|ZP_13846451.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC11D]
gi|419309570|ref|ZP_13851450.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC11E]
gi|419314866|ref|ZP_13856699.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC12A]
gi|419320665|ref|ZP_13862411.1| carA [Escherichia coli DEC12B]
gi|419332281|ref|ZP_13873849.1| carA [Escherichia coli DEC12D]
gi|419338035|ref|ZP_13879527.1| carA [Escherichia coli DEC12E]
gi|419343687|ref|ZP_13885074.1| carA [Escherichia coli DEC13A]
gi|419353013|ref|ZP_13894302.1| carA [Escherichia coli DEC13C]
gi|419358359|ref|ZP_13899592.1| carA [Escherichia coli DEC13D]
gi|419368302|ref|ZP_13909437.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC14A]
gi|419389329|ref|ZP_13930180.1| carA [Escherichia coli DEC14D]
gi|419389437|ref|ZP_13930281.1| carA [Escherichia coli DEC15A]
gi|419399933|ref|ZP_13940687.1| carA [Escherichia coli DEC15B]
gi|419410335|ref|ZP_13951014.1| carA [Escherichia coli DEC15D]
gi|419865106|ref|ZP_14387497.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|419868507|ref|ZP_14390777.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|419873252|ref|ZP_14395244.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|419882190|ref|ZP_14403444.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|419889192|ref|ZP_14409611.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|419897576|ref|ZP_14417158.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|419898905|ref|ZP_14418441.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|419905241|ref|ZP_14424209.1| hypothetical protein ECO10026_28754 [Escherichia coli O26:H11 str.
CVM10026]
gi|419929503|ref|ZP_14447176.1| carbamoyl phosphate synthase small subunit [Escherichia coli 541-1]
gi|420087145|ref|ZP_14599116.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|420092630|ref|ZP_14604332.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|420100126|ref|ZP_14611317.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|420107225|ref|ZP_14617580.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|420115016|ref|ZP_14624604.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|420120309|ref|ZP_14629519.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|420128257|ref|ZP_14636816.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|420132494|ref|ZP_14640841.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|420273001|ref|ZP_14775336.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA40]
gi|420283815|ref|ZP_14786040.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW06591]
gi|420290050|ref|ZP_14792219.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW11039]
gi|420295772|ref|ZP_14797870.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW09109]
gi|420301461|ref|ZP_14803496.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW10119]
gi|420307328|ref|ZP_14809304.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1738]
gi|420312859|ref|ZP_14814774.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1734]
gi|420350912|ref|ZP_14852115.1| carbamoyl-phosphate synthase small chain [Shigella boydii 4444-74]
gi|420361593|ref|ZP_14862527.1| carA [Shigella sonnei 4822-66]
gi|420383663|ref|ZP_14883056.1| carbamoyl-phosphate synthase small chain [Escherichia coli EPECa12]
gi|420389357|ref|ZP_14888631.1| carA [Escherichia coli EPEC C342-62]
gi|421775266|ref|ZP_16211876.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli AD30]
gi|421816246|ref|ZP_16251819.1| carbamoyl-phosphate synthase small chain [Escherichia coli 10.0821]
gi|421821639|ref|ZP_16257084.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK920]
gi|421828392|ref|ZP_16263724.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA7]
gi|422333193|ref|ZP_16414204.1| carbamoyl-phosphate synthase small chain [Escherichia coli
4_1_47FAA]
gi|422761711|ref|ZP_16815469.1| carbamoyl-phosphate synthase [Escherichia coli E1167]
gi|422834324|ref|ZP_16882386.1| carbamoyl-phosphate synthase small subunit [Escherichia coli E101]
gi|422957625|ref|ZP_16969839.1| carbamoyl-phosphate synthase small chain [Escherichia coli H494]
gi|422990740|ref|ZP_16981511.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. C227-11]
gi|422992680|ref|ZP_16983444.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. C236-11]
gi|422997889|ref|ZP_16988645.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 09-7901]
gi|423006372|ref|ZP_16997116.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 04-8351]
gi|423007995|ref|ZP_16998733.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-3677]
gi|423022181|ref|ZP_17012884.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4404]
gi|423027336|ref|ZP_17018029.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4522]
gi|423033173|ref|ZP_17023857.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4623]
gi|423036039|ref|ZP_17026713.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423041159|ref|ZP_17031826.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423047845|ref|ZP_17038502.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423056383|ref|ZP_17045188.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423058394|ref|ZP_17047190.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C5]
gi|423652393|ref|ZP_17627797.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA31]
gi|423709758|ref|ZP_17684112.1| carbamoyl-phosphate synthase small chain [Escherichia coli B799]
gi|424074791|ref|ZP_17812183.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA505]
gi|424081039|ref|ZP_17817946.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA517]
gi|424087716|ref|ZP_17824018.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1996]
gi|424119266|ref|ZP_17853025.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA5]
gi|424125483|ref|ZP_17858725.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA9]
gi|424138102|ref|ZP_17870444.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA14]
gi|424144556|ref|ZP_17876364.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA15]
gi|424150702|ref|ZP_17882008.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA24]
gi|424260054|ref|ZP_17892990.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA25]
gi|424260740|ref|ZP_17893326.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA28]
gi|424416976|ref|ZP_17899096.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA32]
gi|424459375|ref|ZP_17910387.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA39]
gi|424472442|ref|ZP_17922154.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA42]
gi|424478411|ref|ZP_17927700.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW07945]
gi|424484436|ref|ZP_17933355.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW09098]
gi|424490524|ref|ZP_17939005.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW09195]
gi|424497650|ref|ZP_17944973.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4203]
gi|424503896|ref|ZP_17950721.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4196]
gi|424510134|ref|ZP_17956441.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW14313]
gi|424517718|ref|ZP_17962192.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW14301]
gi|424523548|ref|ZP_17967615.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4421]
gi|424529753|ref|ZP_17973422.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4422]
gi|424535724|ref|ZP_17979032.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4013]
gi|424541609|ref|ZP_17984495.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4402]
gi|424547937|ref|ZP_17990199.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4439]
gi|424554227|ref|ZP_17995995.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4436]
gi|424560574|ref|ZP_18001900.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4437]
gi|424572781|ref|ZP_18013252.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1845]
gi|424584610|ref|ZP_18024230.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1863]
gi|424748155|ref|ZP_18176304.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|424764803|ref|ZP_18192220.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|424774637|ref|ZP_18201647.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|425095422|ref|ZP_18498482.1| carbamoyl-phosphate synthase small chain [Escherichia coli 3.4870]
gi|425101507|ref|ZP_18504195.1| carbamoyl-phosphate synthase small chain [Escherichia coli 5.2239]
gi|425107364|ref|ZP_18509649.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
6.0172]
gi|425123176|ref|ZP_18524791.1| carbamoyl-phosphate synthase small chain [Escherichia coli 8.0586]
gi|425129202|ref|ZP_18530345.1| carbamoyl-phosphate synthase small chain [Escherichia coli 8.2524]
gi|425135544|ref|ZP_18536313.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
10.0833]
gi|425147768|ref|ZP_18547705.1| carbamoyl-phosphate synthase small chain [Escherichia coli 88.0221]
gi|425165358|ref|ZP_18564201.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA507]
gi|425171645|ref|ZP_18570082.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA504]
gi|425177446|ref|ZP_18575533.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1999]
gi|425190404|ref|ZP_18587563.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE1487]
gi|425209172|ref|ZP_18604944.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli PA4]
gi|425221270|ref|ZP_18616210.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA23]
gi|425221776|ref|ZP_18616671.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA49]
gi|425228030|ref|ZP_18622462.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA45]
gi|425234328|ref|ZP_18628322.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TT12B]
gi|425240303|ref|ZP_18633973.1| carbamoylphosphate synthetase small subunit [Escherichia coli MA6]
gi|425246384|ref|ZP_18639623.1| carbamoylphosphate synthetase small subunit [Escherichia coli 5905]
gi|425252169|ref|ZP_18645088.1| carbamoylphosphate synthetase small subunit [Escherichia coli
CB7326]
gi|425264489|ref|ZP_18656448.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC96038]
gi|425264626|ref|ZP_18656582.1| carbamoylphosphate synthetase small subunit [Escherichia coli 5412]
gi|425292000|ref|ZP_18682640.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA38]
gi|425303540|ref|ZP_18693356.1| carbamoylphosphate synthetase small subunit [Escherichia coli N1]
gi|425314712|ref|ZP_18703830.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1736]
gi|425326950|ref|ZP_18715222.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1846]
gi|425333138|ref|ZP_18720907.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1847]
gi|425339558|ref|ZP_18726839.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1848]
gi|425351650|ref|ZP_18738071.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1850]
gi|425357636|ref|ZP_18743650.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1856]
gi|425363748|ref|ZP_18749352.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1862]
gi|425370183|ref|ZP_18755189.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1864]
gi|425376760|ref|ZP_18761194.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1865]
gi|425389037|ref|ZP_18772571.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1866]
gi|425389678|ref|ZP_18773173.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1868]
gi|425395803|ref|ZP_18778883.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1869]
gi|425407959|ref|ZP_18790151.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1870]
gi|425408335|ref|ZP_18790524.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE098]
gi|425414604|ref|ZP_18796275.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK523]
gi|425425754|ref|ZP_18806839.1| carbamoylphosphate synthetase small subunit [Escherichia coli
0.1304]
gi|427803106|ref|ZP_18970173.1| carbamoyl-phosphate synthetase [Escherichia coli chi7122]
gi|427807708|ref|ZP_18974773.1| carbamoyl-phosphate synthetase, glutamine (small) subunit
[Escherichia coli]
gi|428950560|ref|ZP_19022741.1| carbamoyl-phosphate synthase small chain [Escherichia coli 88.1042]
gi|428956406|ref|ZP_19028154.1| carbamoyl-phosphate synthase small chain [Escherichia coli 89.0511]
gi|428962773|ref|ZP_19033994.1| carbamoyl-phosphate synthase small chain [Escherichia coli 90.0091]
gi|428975405|ref|ZP_19045616.1| carbamoyl-phosphate synthase small chain [Escherichia coli 90.2281]
gi|428981069|ref|ZP_19050840.1| carbamoyl-phosphate synthase small chain [Escherichia coli 93.0055]
gi|428993172|ref|ZP_19062116.1| carbamoyl-phosphate synthase small chain [Escherichia coli 94.0618]
gi|428999264|ref|ZP_19067814.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0183]
gi|429005498|ref|ZP_19073470.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.1288]
gi|429018090|ref|ZP_19084907.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0428]
gi|429030048|ref|ZP_19095957.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0939]
gi|429036200|ref|ZP_19101680.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0932]
gi|429042293|ref|ZP_19107331.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0107]
gi|429048004|ref|ZP_19112672.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0003]
gi|429053373|ref|ZP_19117895.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.1742]
gi|429064449|ref|ZP_19128349.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0672]
gi|429071068|ref|ZP_19134436.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
99.0678]
gi|429076298|ref|ZP_19139528.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0713]
gi|429722238|ref|ZP_19257137.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-9450]
gi|429774316|ref|ZP_19306320.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02030]
gi|429779576|ref|ZP_19311532.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02033-1]
gi|429783631|ref|ZP_19315545.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02092]
gi|429788969|ref|ZP_19320845.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02093]
gi|429795199|ref|ZP_19327026.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02281]
gi|429801125|ref|ZP_19332904.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02318]
gi|429804757|ref|ZP_19336505.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02913]
gi|429809568|ref|ZP_19341271.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-03439]
gi|429815328|ref|ZP_19346988.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-04080]
gi|429820539|ref|ZP_19352154.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-03943]
gi|429829879|ref|ZP_19360799.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0010]
gi|429906590|ref|ZP_19372560.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-9990]
gi|429910785|ref|ZP_19376742.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-9941]
gi|429916625|ref|ZP_19382566.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4984]
gi|429921663|ref|ZP_19387585.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-5604]
gi|429927480|ref|ZP_19393387.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4986]
gi|429931413|ref|ZP_19397309.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937956|ref|ZP_19403837.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4988]
gi|429938671|ref|ZP_19404545.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-5603]
gi|429946312|ref|ZP_19412168.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-6006]
gi|429948960|ref|ZP_19414808.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec12-0465]
gi|429957227|ref|ZP_19423056.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec12-0466]
gi|432368028|ref|ZP_19611136.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE10]
gi|432379652|ref|ZP_19622627.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE12]
gi|432389926|ref|ZP_19632792.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE21]
gi|432452788|ref|ZP_19695035.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE193]
gi|432479361|ref|ZP_19721327.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE210]
gi|432492340|ref|ZP_19734185.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE213]
gi|432578750|ref|ZP_19815186.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE56]
gi|432614833|ref|ZP_19850970.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE75]
gi|432635352|ref|ZP_19871243.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE81]
gi|432668857|ref|ZP_19904413.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE119]
gi|432677612|ref|ZP_19913043.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE142]
gi|432763319|ref|ZP_19997776.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE48]
gi|432808670|ref|ZP_20042580.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE91]
gi|432812182|ref|ZP_20046032.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE101]
gi|432830012|ref|ZP_20063622.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE135]
gi|432833137|ref|ZP_20066686.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE136]
gi|432837595|ref|ZP_20071092.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE140]
gi|432872575|ref|ZP_20092391.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE147]
gi|432932297|ref|ZP_20132199.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE184]
gi|432944599|ref|ZP_20141009.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE196]
gi|433031439|ref|ZP_20219265.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE112]
gi|433041529|ref|ZP_20229068.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE117]
gi|433090382|ref|ZP_20276695.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE138]
gi|433133223|ref|ZP_20318610.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE166]
gi|433191826|ref|ZP_20375859.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE90]
gi|433201476|ref|ZP_20385294.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE95]
gi|442597953|ref|ZP_21015731.1| Carbamoyl-phosphate synthase small chain [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443616049|ref|YP_007379905.1| carbamoyl phosphate synthase small subunit [Escherichia coli APEC
O78]
gi|444928544|ref|ZP_21247716.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0814]
gi|444933942|ref|ZP_21252908.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0815]
gi|444939512|ref|ZP_21258182.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0816]
gi|444945201|ref|ZP_21263639.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0839]
gi|444961389|ref|ZP_21279170.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1775]
gi|444972674|ref|ZP_21289979.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1805]
gi|444978187|ref|ZP_21295195.1| carbamoyl-phosphate synthase small chain [Escherichia coli ATCC
700728]
gi|444983508|ref|ZP_21300384.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA11]
gi|444988751|ref|ZP_21305502.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA19]
gi|444999245|ref|ZP_21315727.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA13]
gi|444999576|ref|ZP_21316051.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA2]
gi|445005038|ref|ZP_21321392.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA47]
gi|445015343|ref|ZP_21331426.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA48]
gi|445015981|ref|ZP_21332042.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA8]
gi|445021454|ref|ZP_21337388.1| carbamoyl-phosphate synthase small chain [Escherichia coli 7.1982]
gi|445026694|ref|ZP_21342483.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1781]
gi|445032170|ref|ZP_21347808.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1762]
gi|445043038|ref|ZP_21358387.1| carbamoyl-phosphate synthase small chain [Escherichia coli 3.4880]
gi|445048689|ref|ZP_21363872.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0083]
gi|445054308|ref|ZP_21369270.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0670]
gi|450208896|ref|ZP_21893824.1| carbamoyl phosphate synthase small subunit [Escherichia coli O08]
gi|450237842|ref|ZP_21898726.1| carbamoyl phosphate synthase small subunit [Escherichia coli S17]
gi|452970119|ref|ZP_21968346.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. EC4009]
gi|62288012|sp|P0A6F1.1|CARA_ECOLI RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|62288013|sp|P0A6F2.1|CARA_ECO57 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|12512718|gb|AAG54334.1|AE005180_1 carbamoyl-phosphate synthetase, glutamine (small) subunit
[Escherichia coli O157:H7 str. EDL933]
gi|551790|gb|AAA23538.1| carbamoyl-phosphate synthetase subunit A [Escherichia coli]
gi|1786215|gb|AAC73143.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|13359491|dbj|BAB33458.1| carbamoyl-phosphate synthetase small subunit [Escherichia coli
O157:H7 str. Sakai]
gi|21321914|dbj|BAB96601.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli str. K12 substr.
W3110]
gi|73854127|gb|AAZ86834.1| carbamoyl-phosphate synthetase, glutamine (small) subunit [Shigella
sonnei Ss046]
gi|81244059|gb|ABB64767.1| carbamoyl-phosphate synthetase, glutamine (small) subunit [Shigella
boydii Sb227]
gi|157065180|gb|ABV04435.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli HS]
gi|157080314|gb|ABV20022.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
E24377A]
gi|169887530|gb|ACB01237.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|187430187|gb|ACD09461.1| carbamoyl-phosphate synthase, small subunit [Shigella boydii CDC
3083-94]
gi|187767725|gb|EDU31569.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4196]
gi|188014317|gb|EDU52439.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4113]
gi|188487680|gb|EDU62783.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
53638]
gi|189000705|gb|EDU69691.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4076]
gi|189356065|gb|EDU74484.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4401]
gi|189364056|gb|EDU82475.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4486]
gi|189366993|gb|EDU85409.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4501]
gi|189374859|gb|EDU93275.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC869]
gi|189376014|gb|EDU94430.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC508]
gi|190901060|gb|EDV60838.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli B7A]
gi|192926138|gb|EDV80779.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli E22]
gi|192955714|gb|EDV86188.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
E110019]
gi|194412082|gb|EDX28392.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli B171]
gi|194417210|gb|EDX33321.1| carbamoyl-phosphate synthase, small subunit [Shigella dysenteriae
1012]
gi|194421371|gb|EDX37388.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
101-1]
gi|208727189|gb|EDZ76790.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4206]
gi|208734101|gb|EDZ82788.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4045]
gi|208738457|gb|EDZ86139.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4042]
gi|209161289|gb|ACI38722.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. EC4115]
gi|209747064|gb|ACI71839.1| carbamoyl-phosphate synthetase small subunit [Escherichia coli]
gi|209747066|gb|ACI71840.1| carbamoyl-phosphate synthetase small subunit [Escherichia coli]
gi|209747068|gb|ACI71841.1| carbamoyl-phosphate synthetase small subunit [Escherichia coli]
gi|209747070|gb|ACI71842.1| carbamoyl-phosphate synthetase small subunit [Escherichia coli]
gi|209747072|gb|ACI71843.1| carbamoyl-phosphate synthetase small subunit [Escherichia coli]
gi|217322759|gb|EEC31183.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
O157:H7 str. TW14588]
gi|218350235|emb|CAU95918.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli 55989]
gi|218359384|emb|CAQ96923.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli IAI1]
gi|238860104|gb|ACR62102.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli BW2952]
gi|242375872|emb|CAQ30552.1| carA, subunit of carbamoyl phosphate synthetase [Escherichia coli
BL21(DE3)]
gi|253325979|gb|ACT30581.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972059|gb|ACT37730.1| carbamoyl-phosphate synthase small subunit [Escherichia coli B str.
REL606]
gi|253976268|gb|ACT41938.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
BL21(DE3)]
gi|254590568|gb|ACT69929.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli O157:H7 str. TW14359]
gi|257751891|dbj|BAI23393.1| carbamoyl phosphate synthetase small subunit [Escherichia coli
O26:H11 str. 11368]
gi|257757416|dbj|BAI28913.1| carbamoyl phosphate synthetase small subunit [Escherichia coli
O103:H2 str. 12009]
gi|257762538|dbj|BAI34033.1| carbamoyl phosphate synthetase small subunit [Escherichia coli
O111:H- str. 11128]
gi|260450759|gb|ACX41181.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli DH1]
gi|284919813|emb|CBG32868.1| carbamoyl-phosphate synthase small chain [Escherichia coli 042]
gi|290760728|gb|ADD54689.1| Carbamoylphosphate synthase small subunit [Escherichia coli O55:H7
str. CB9615]
gi|306908494|gb|EFN38992.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli W]
gi|315059257|gb|ADT73584.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli W]
gi|315134727|dbj|BAJ41886.1| carbamoyl-phosphate synthase [Escherichia coli DH1]
gi|320179590|gb|EFW54539.1| Carbamoyl-phosphate synthase small chain [Shigella boydii ATCC
9905]
gi|320186144|gb|EFW60886.1| Carbamoyl-phosphate synthase small chain [Shigella flexneri CDC
796-83]
gi|320190448|gb|EFW65098.1| Carbamoyl-phosphate synthase small chain [Escherichia coli O157:H7
str. EC1212]
gi|320200451|gb|EFW75037.1| Carbamoyl-phosphate synthase small chain [Escherichia coli EC4100B]
gi|320642072|gb|EFX11423.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. G5101]
gi|320647435|gb|EFX16230.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H- str. 493-89]
gi|320652769|gb|EFX21007.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H- str. H 2687]
gi|320658158|gb|EFX25887.1| carbamoyl phosphate synthase small subunit [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320663467|gb|EFX30751.1| carbamoyl phosphate synthase small subunit [Escherichia coli O55:H7
str. USDA 5905]
gi|320668779|gb|EFX35574.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|323176338|gb|EFZ61930.1| carbamoyl-phosphate synthase small chain [Escherichia coli OK1180]
gi|323181728|gb|EFZ67141.1| carbamoyl-phosphate synthase small chain [Escherichia coli OK1357]
gi|323380186|gb|ADX52454.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
KO11FL]
gi|324118383|gb|EGC12277.1| carbamoyl-phosphate synthase [Escherichia coli E1167]
gi|326345251|gb|EGD68994.1| Carbamoyl-phosphate synthase small chain [Escherichia coli O157:H7
str. 1125]
gi|326346896|gb|EGD70630.1| Carbamoyl-phosphate synthase small chain [Escherichia coli O157:H7
str. 1044]
gi|331061313|gb|EGI33276.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA143]
gi|331066476|gb|EGI38353.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA271]
gi|332095317|gb|EGJ00340.1| carbamoyl-phosphate synthase small chain [Shigella boydii 5216-82]
gi|332341363|gb|AEE54697.1| carbamoyl-phosphate synthase, small subunit CarA [Escherichia coli
UMNK88]
gi|340736204|gb|EGR65252.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 01-09591]
gi|340741918|gb|EGR76059.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. LB226692]
gi|342361816|gb|EGU25946.1| carbamoyl phosphate synthase small subunit [Escherichia coli
XH140A]
gi|344194454|gb|EGV48528.1| carbamoyl phosphate synthase small subunit [Escherichia coli XH001]
gi|345366808|gb|EGW98897.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_DG131-3]
gi|345368096|gb|EGX00103.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_MHI813]
gi|345369264|gb|EGX01252.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_H.1.8]
gi|345388729|gb|EGX18539.1| carbamoyl-phosphate synthase small chain [Escherichia coli TX1999]
gi|354859238|gb|EHF19686.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 04-8351]
gi|354859726|gb|EHF20173.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. C227-11]
gi|354866423|gb|EHF26846.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. C236-11]
gi|354876757|gb|EHF37117.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 09-7901]
gi|354881766|gb|EHF42094.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4404]
gi|354884864|gb|EHF45175.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-3677]
gi|354886311|gb|EHF46598.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4522]
gi|354889827|gb|EHF50074.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4623]
gi|354902027|gb|EHF62149.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354905353|gb|EHF65436.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354907860|gb|EHF67916.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354910131|gb|EHF70159.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354918332|gb|EHF78288.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-4632 C5]
gi|359330898|dbj|BAL37345.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli str. K-12 substr.
MDS42]
gi|371597950|gb|EHN86768.1| carbamoyl-phosphate synthase small chain [Escherichia coli H494]
gi|371601844|gb|EHN90563.1| carbamoyl-phosphate synthase small subunit [Escherichia coli E101]
gi|373245708|gb|EHP65173.1| carbamoyl-phosphate synthase small chain [Escherichia coli
4_1_47FAA]
gi|374356959|gb|AEZ38666.1| carbamoyl phosphate synthase small subunit [Escherichia coli O55:H7
str. RM12579]
gi|377887460|gb|EHU51937.1| carA [Escherichia coli DEC3A]
gi|377915301|gb|EHU79410.1| carA [Escherichia coli DEC3C]
gi|377919585|gb|EHU83623.1| carA [Escherichia coli DEC3D]
gi|377921767|gb|EHU85762.1| carA [Escherichia coli DEC3E]
gi|377922216|gb|EHU86208.1| carA [Escherichia coli DEC4A]
gi|377925715|gb|EHU89655.1| carA [Escherichia coli DEC4B]
gi|377933721|gb|EHU97565.1| carA [Escherichia coli DEC3F]
gi|377935853|gb|EHU99647.1| carA [Escherichia coli DEC4D]
gi|377936243|gb|EHV00037.1| carA [Escherichia coli DEC4C]
gi|377942554|gb|EHV06288.1| carA [Escherichia coli DEC4E]
gi|377953142|gb|EHV16723.1| carA [Escherichia coli DEC4F]
gi|377974588|gb|EHV37915.1| carA [Escherichia coli DEC5B]
gi|377978787|gb|EHV42066.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC5E]
gi|377983494|gb|EHV46738.1| carA [Escherichia coli DEC5D]
gi|377983783|gb|EHV47025.1| carA [Escherichia coli DEC5C]
gi|378019279|gb|EHV82110.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC7A]
gi|378028594|gb|EHV91211.1| carA [Escherichia coli DEC7C]
gi|378034132|gb|EHV96698.1| carA [Escherichia coli DEC7D]
gi|378043216|gb|EHW05652.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC7E]
gi|378054495|gb|EHW16773.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC8A]
gi|378064512|gb|EHW26672.1| carA [Escherichia coli DEC8C]
gi|378071240|gb|EHW33311.1| carA [Escherichia coli DEC9B]
gi|378073743|gb|EHW35788.1| carA [Escherichia coli DEC8E]
gi|378083384|gb|EHW45317.1| carA [Escherichia coli DEC9A]
gi|378085053|gb|EHW46947.1| carA [Escherichia coli DEC9D]
gi|378104314|gb|EHW65973.1| carA [Escherichia coli DEC9E]
gi|378108763|gb|EHW70375.1| carA [Escherichia coli DEC10A]
gi|378110434|gb|EHW72029.1| carA [Escherichia coli DEC10D]
gi|378118625|gb|EHW80127.1| carA [Escherichia coli DEC10B]
gi|378123470|gb|EHW84888.1| carA [Escherichia coli DEC11A]
gi|378135048|gb|EHW96361.1| carA [Escherichia coli DEC10E]
gi|378137247|gb|EHW98530.1| carA [Escherichia coli DEC11B]
gi|378141255|gb|EHX02472.1| carA [Escherichia coli DEC10F]
gi|378154188|gb|EHX15264.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC11D]
gi|378158342|gb|EHX19367.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC11C]
gi|378162211|gb|EHX23176.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC11E]
gi|378176363|gb|EHX37169.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC12A]
gi|378176735|gb|EHX37540.1| carA [Escherichia coli DEC12B]
gi|378191722|gb|EHX52297.1| carA [Escherichia coli DEC13A]
gi|378192453|gb|EHX53011.1| carA [Escherichia coli DEC12D]
gi|378194307|gb|EHX54822.1| carA [Escherichia coli DEC12E]
gi|378208966|gb|EHX69342.1| carA [Escherichia coli DEC13D]
gi|378209648|gb|EHX70016.1| carA [Escherichia coli DEC13C]
gi|378223533|gb|EHX83752.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC14A]
gi|378224370|gb|EHX84573.1| carA [Escherichia coli DEC14D]
gi|378239083|gb|EHX99077.1| carA [Escherichia coli DEC15B]
gi|378246285|gb|EHY06212.1| carA [Escherichia coli DEC15A]
gi|378249800|gb|EHY09709.1| carA [Escherichia coli DEC15D]
gi|383390062|gb|AFH15020.1| carbamoyl phosphate synthase small subunit [Escherichia coli
KO11FL]
gi|383403457|gb|AFH09700.1| carbamoyl phosphate synthase small subunit [Escherichia coli W]
gi|385705206|gb|EIG42272.1| carbamoyl-phosphate synthase small chain [Escherichia coli B799]
gi|386142919|gb|EIG84055.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
1.2741]
gi|386144958|gb|EIG91422.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
97.0246]
gi|386153591|gb|EIH04880.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
5.0588]
gi|386159600|gb|EIH21414.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
1.2264]
gi|386166491|gb|EIH33011.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
96.0497]
gi|386174500|gb|EIH46493.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
99.0741]
gi|386179251|gb|EIH56730.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
3.2608]
gi|386191380|gb|EIH80124.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
4.0522]
gi|386193384|gb|EIH87668.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
JB1-95]
gi|386199248|gb|EIH98239.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
96.154]
gi|386206919|gb|EII11425.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
5.0959]
gi|386210207|gb|EII20687.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
9.0111]
gi|386216739|gb|EII33228.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
4.0967]
gi|386228559|gb|EII55915.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
3.3884]
gi|386233884|gb|EII65864.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
2.4168]
gi|386261086|gb|EIJ16554.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
900105 (10e)]
gi|386794049|gb|AFJ27083.1| carbamoyl phosphate synthase small subunit [Escherichia coli
Xuzhou21]
gi|388338339|gb|EIL04807.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O103:H25 str. CVM9340]
gi|388344594|gb|EIL10425.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O103:H2 str. CVM9450]
gi|388352981|gb|EIL18063.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9534]
gi|388354991|gb|EIL19856.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9574]
gi|388358008|gb|EIL22496.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9570]
gi|388362489|gb|EIL26494.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9545]
gi|388380927|gb|EIL43508.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM9942]
gi|388381418|gb|EIL43985.1| hypothetical protein ECO10026_28754 [Escherichia coli O26:H11 str.
CVM10026]
gi|388403297|gb|EIL63832.1| carbamoyl phosphate synthase small subunit [Escherichia coli 541-1]
gi|390651575|gb|EIN29846.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1996]
gi|390654104|gb|EIN32157.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA517]
gi|390654400|gb|EIN32446.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA505]
gi|390693695|gb|EIN68312.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA9]
gi|390694657|gb|EIN69215.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA5]
gi|390711969|gb|EIN84927.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA15]
gi|390715054|gb|EIN87921.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA14]
gi|390716631|gb|EIN89426.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA25]
gi|390735033|gb|EIO06462.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA24]
gi|390738319|gb|EIO09537.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA28]
gi|390753239|gb|EIO22962.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA31]
gi|390753660|gb|EIO23337.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA32]
gi|390763290|gb|EIO32539.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA40]
gi|390778482|gb|EIO46240.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW06591]
gi|390781264|gb|EIO48948.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA42]
gi|390789402|gb|EIO56863.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA39]
gi|390802776|gb|EIO69805.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW11039]
gi|390812204|gb|EIO78887.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW07945]
gi|390812570|gb|EIO79246.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW09109]
gi|390820054|gb|EIO86360.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW10119]
gi|390824977|gb|EIO90926.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW09098]
gi|390837895|gb|EIP02213.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4203]
gi|390841172|gb|EIP05143.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4196]
gi|390845458|gb|EIP09111.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW09195]
gi|390856674|gb|EIP19245.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW14301]
gi|390861444|gb|EIP23692.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4421]
gi|390862956|gb|EIP25118.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW14313]
gi|390872452|gb|EIP33741.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4422]
gi|390877662|gb|EIP38557.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4013]
gi|390887572|gb|EIP47520.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4402]
gi|390888860|gb|EIP48642.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4439]
gi|390896405|gb|EIP55795.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4436]
gi|390904434|gb|EIP63430.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1738]
gi|390912368|gb|EIP71020.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4437]
gi|390912711|gb|EIP71357.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1734]
gi|390914153|gb|EIP72697.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1863]
gi|390926599|gb|EIP84158.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1845]
gi|391289746|gb|EIQ48230.1| carbamoyl-phosphate synthase small chain [Shigella boydii 4444-74]
gi|391297671|gb|EIQ55716.1| carA [Shigella sonnei 4822-66]
gi|391310592|gb|EIQ68244.1| carbamoyl-phosphate synthase small chain [Escherichia coli EPECa12]
gi|391315590|gb|EIQ73114.1| carA [Escherichia coli EPEC C342-62]
gi|394386047|gb|EJE63561.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM10224]
gi|394393395|gb|EJE70080.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9602]
gi|394400648|gb|EJE76562.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CVM9634]
gi|394407560|gb|EJE82378.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM10021]
gi|394413343|gb|EJE87384.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9553]
gi|394421752|gb|EJE95201.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CVM9455]
gi|394429005|gb|EJF01476.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM9952]
gi|394429370|gb|EJF01803.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CVM10030]
gi|397782617|gb|EJK93485.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_O31]
gi|397903671|gb|EJL19966.1| carA [Shigella sonnei str. Moseley]
gi|406779494|gb|AFS58918.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407056089|gb|AFS76140.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063527|gb|AFS84574.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408073518|gb|EKH07827.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA7]
gi|408077253|gb|EKH11461.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK920]
gi|408097611|gb|EKH30494.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA507]
gi|408103793|gb|EKH36122.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA504]
gi|408111221|gb|EKH42972.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1999]
gi|408123025|gb|EKH53827.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE1487]
gi|408133948|gb|EKH63801.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA23]
gi|408142132|gb|EKH71513.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli PA4]
gi|408154641|gb|EKH82972.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA49]
gi|408159654|gb|EKH87706.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA45]
gi|408167916|gb|EKH95369.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TT12B]
gi|408174018|gb|EKI01014.1| carbamoylphosphate synthetase small subunit [Escherichia coli MA6]
gi|408175578|gb|EKI02476.1| carbamoylphosphate synthetase small subunit [Escherichia coli 5905]
gi|408175730|gb|EKI02623.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC96038]
gi|408187888|gb|EKI13777.1| carbamoylphosphate synthetase small subunit [Escherichia coli
CB7326]
gi|408193628|gb|EKI19146.1| carbamoylphosphate synthetase small subunit [Escherichia coli 5412]
gi|408232823|gb|EKI55988.1| carbamoylphosphate synthetase small subunit [Escherichia coli N1]
gi|408234703|gb|EKI57709.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA38]
gi|408250277|gb|EKI72137.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1736]
gi|408260816|gb|EKI81865.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1846]
gi|408269425|gb|EKI89670.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1847]
gi|408271339|gb|EKI91466.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1848]
gi|408286204|gb|EKJ05132.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1850]
gi|408289442|gb|EKJ08200.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1856]
gi|408301945|gb|EKJ19499.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1862]
gi|408302151|gb|EKJ19686.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1864]
gi|408303145|gb|EKJ20611.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1866]
gi|408311560|gb|EKJ28561.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1865]
gi|408319720|gb|EKJ35839.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1868]
gi|408320144|gb|EKJ36247.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1870]
gi|408332385|gb|EKJ47420.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1869]
gi|408338279|gb|EKJ52927.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE098]
gi|408351223|gb|EKJ65014.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK523]
gi|408353554|gb|EKJ67049.1| carbamoylphosphate synthetase small subunit [Escherichia coli
0.1304]
gi|408459698|gb|EKJ83479.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli AD30]
gi|408560620|gb|EKK36883.1| carbamoyl-phosphate synthase small chain [Escherichia coli 5.2239]
gi|408561037|gb|EKK37281.1| carbamoyl-phosphate synthase small chain [Escherichia coli 3.4870]
gi|408561447|gb|EKK37650.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
6.0172]
gi|408586096|gb|EKK60879.1| carbamoyl-phosphate synthase small chain [Escherichia coli 8.0586]
gi|408592028|gb|EKK66421.1| carbamoyl-phosphate synthase small chain [Escherichia coli 8.2524]
gi|408593779|gb|EKK68087.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
10.0833]
gi|408614139|gb|EKK87422.1| carbamoyl-phosphate synthase small chain [Escherichia coli 88.0221]
gi|408618240|gb|EKK91327.1| carbamoyl-phosphate synthase small chain [Escherichia coli 10.0821]
gi|412961288|emb|CCK45193.1| carbamoyl-phosphate synthetase [Escherichia coli chi7122]
gi|412967887|emb|CCJ42500.1| carbamoyl-phosphate synthetase, glutamine (small) subunit
[Escherichia coli]
gi|421933493|gb|EKT91280.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H8 str. CFSAN001632]
gi|421937206|gb|EKT94824.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O111:H11 str. CFSAN001630]
gi|421945174|gb|EKU02401.1| carbamoyl phosphate synthase small subunit [Escherichia coli
O26:H11 str. CFSAN001629]
gi|427215734|gb|EKV84900.1| carbamoyl-phosphate synthase small chain [Escherichia coli 88.1042]
gi|427219175|gb|EKV88144.1| carbamoyl-phosphate synthase small chain [Escherichia coli 89.0511]
gi|427235376|gb|EKW02997.1| carbamoyl-phosphate synthase small chain [Escherichia coli 90.2281]
gi|427237880|gb|EKW05402.1| carbamoyl-phosphate synthase small chain [Escherichia coli 90.0091]
gi|427254089|gb|EKW20457.1| carbamoyl-phosphate synthase small chain [Escherichia coli 93.0055]
gi|427255141|gb|EKW21412.1| carbamoyl-phosphate synthase small chain [Escherichia coli 94.0618]
gi|427272158|gb|EKW36911.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0183]
gi|427279234|gb|EKW43683.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.1288]
gi|427287373|gb|EKW51135.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0428]
gi|427294867|gb|EKW58021.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0939]
gi|427305565|gb|EKW68159.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0003]
gi|427307976|gb|EKW70395.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0932]
gi|427312347|gb|EKW74503.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0107]
gi|427323190|gb|EKW84792.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.1742]
gi|427335373|gb|EKW96403.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0713]
gi|427335774|gb|EKW96803.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
99.0678]
gi|427337232|gb|EKW98150.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0672]
gi|429262433|gb|EKY45773.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0010]
gi|429352366|gb|EKY89081.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02030]
gi|429353422|gb|EKY90130.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02033-1]
gi|429353920|gb|EKY90625.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02092]
gi|429367410|gb|EKZ04004.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02093]
gi|429368562|gb|EKZ05148.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02281]
gi|429370788|gb|EKZ07351.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02318]
gi|429383162|gb|EKZ19623.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-02913]
gi|429386011|gb|EKZ22461.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-03439]
gi|429386924|gb|EKZ23369.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-03943]
gi|429398184|gb|EKZ34527.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. 11-04080]
gi|429399900|gb|EKZ36218.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-9450]
gi|429400234|gb|EKZ36551.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-9990]
gi|429411325|gb|EKZ47535.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4984]
gi|429412897|gb|EKZ49087.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4986]
gi|429419949|gb|EKZ56083.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4987]
gi|429423811|gb|EKZ59918.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-4988]
gi|429429968|gb|EKZ66035.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-5603]
gi|429435910|gb|EKZ71927.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-5604]
gi|429443094|gb|EKZ79047.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec12-0465]
gi|429445516|gb|EKZ81457.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-6006]
gi|429451985|gb|EKZ87872.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec12-0466]
gi|429456836|gb|EKZ92679.1| carbamoyl-phosphate synthase small chain [Escherichia coli O104:H4
str. Ec11-9941]
gi|430889689|gb|ELC12349.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE10]
gi|430894261|gb|ELC16550.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE12]
gi|430923539|gb|ELC44274.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE21]
gi|430975382|gb|ELC92277.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE193]
gi|431011499|gb|ELD25574.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE210]
gi|431014092|gb|ELD27801.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE213]
gi|431109706|gb|ELE13656.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE56]
gi|431158542|gb|ELE59140.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE75]
gi|431175027|gb|ELE75058.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE81]
gi|431208036|gb|ELF06259.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE142]
gi|431214806|gb|ELF12556.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE119]
gi|431314394|gb|ELG02346.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE48]
gi|431351893|gb|ELG38679.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE91]
gi|431358285|gb|ELG44943.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE101]
gi|431380677|gb|ELG65316.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE135]
gi|431389236|gb|ELG72949.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE136]
gi|431392988|gb|ELG76557.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE140]
gi|431405920|gb|ELG89152.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE147]
gi|431457307|gb|ELH37646.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE184]
gi|431464530|gb|ELH44649.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE196]
gi|431561174|gb|ELI34558.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE117]
gi|431561623|gb|ELI34988.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE112]
gi|431616155|gb|ELI85222.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE138]
gi|431664328|gb|ELJ31068.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE166]
gi|431723648|gb|ELJ87593.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE90]
gi|431727492|gb|ELJ91249.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE95]
gi|441653618|emb|CCQ03947.1| Carbamoyl-phosphate synthase small chain [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443420557|gb|AGC85461.1| carbamoyl phosphate synthase small subunit [Escherichia coli APEC
O78]
gi|444543354|gb|ELV22616.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0814]
gi|444552759|gb|ELV30531.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0815]
gi|444566166|gb|ELV43002.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0839]
gi|444568327|gb|ELV45002.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0816]
gi|444587334|gb|ELV62798.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1775]
gi|444600973|gb|ELV75782.1| carbamoyl-phosphate synthase small chain [Escherichia coli ATCC
700728]
gi|444601304|gb|ELV76111.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA11]
gi|444602084|gb|ELV76839.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA13]
gi|444610119|gb|ELV84549.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1805]
gi|444616445|gb|ELV90607.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA19]
gi|444618918|gb|ELV92983.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA48]
gi|444625077|gb|ELV98948.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA2]
gi|444633946|gb|ELW07437.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA47]
gi|444639249|gb|ELW12568.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA8]
gi|444649045|gb|ELW21951.1| carbamoyl-phosphate synthase small chain [Escherichia coli 7.1982]
gi|444651204|gb|ELW24013.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1781]
gi|444655232|gb|ELW27851.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1762]
gi|444668694|gb|ELW40694.1| carbamoyl-phosphate synthase small chain [Escherichia coli 3.4880]
gi|444673592|gb|ELW45218.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0083]
gi|444675033|gb|ELW46514.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0670]
gi|449323850|gb|EMD13796.1| carbamoyl phosphate synthase small subunit [Escherichia coli O08]
gi|449325903|gb|EMD15799.1| carbamoyl phosphate synthase small subunit [Escherichia coli S17]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|432966178|ref|ZP_20155098.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE203]
gi|431475539|gb|ELH55343.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE203]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPGAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|419173439|ref|ZP_13717301.1| carA [Escherichia coli DEC7B]
gi|432483676|ref|ZP_19725605.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE212]
gi|433171800|ref|ZP_20356370.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE232]
gi|378038930|gb|EHW01435.1| carA [Escherichia coli DEC7B]
gi|431019901|gb|ELD33292.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE212]
gi|431697104|gb|ELJ62249.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE232]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|339998087|ref|YP_004728970.1| carbamoyl-phosphate synthase small subunit [Salmonella bongori NCTC
12419]
gi|339511448|emb|CCC29149.1| carbamoyl-phosphate synthase small chain [Salmonella bongori NCTC
12419]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q + GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHVQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ E+++S+ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALAQELAKSFPGLNGMDLAKEVTTAEAYSWTQGS---WSLK 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 179 DGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSADDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDTPVFGICLGHQLLALASG 280
>gi|399907845|ref|ZP_10776397.1| carbamoyl phosphate synthase small subunit [Halomonas sp. KM-1]
Length = 381
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 185/282 (65%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LE+GS++ + GA G GEVVFNT++TGYQEILTD SY Q V +T PHIGNTG
Sbjct: 5 AILALENGSVFHGTAIGADGQTSGEVVFNTAMTGYQEILTDLSYTRQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
VN +D ES AGLVIR L + SN+R ++L +YL +N++GI D+DTR +TR LR
Sbjct: 65 VNAEDVESGSIAAAGLVIRDLPLIASNFRSEQSLSDYLKSQNVLGIADIDTRRLTRILRD 124
Query: 127 ---QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVEST----KP 178
Q+G+++ E + + L +R++ + G+DL +VS K+ +EW E+ +
Sbjct: 125 KGAQNGAILAGREAEGEDAVERALAAARAFPGLKGMDLAKEVSCKQAYEWNEAEWVLGQG 184
Query: 179 DWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ D + ER + V+ YD+G+K+NILR LAS GC++ VVP+ PAS+ L PDG+L
Sbjct: 185 NVDASGSER---PFHVVVYDYGVKYNILRMLASRGCRLTVVPAQTPASDVLARNPDGILL 241
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+NGPGDP+ YA+ ++E+L VPVFGIC+GHQLL A G
Sbjct: 242 ANGPGDPAPCDYAIKAIQEILETNVPVFGICLGHQLLALAAG 283
>gi|225025249|ref|ZP_03714441.1| hypothetical protein EIKCOROL_02146 [Eikenella corrodens ATCC
23834]
gi|224942007|gb|EEG23216.1| hypothetical protein EIKCOROL_02146 [Eikenella corrodens ATCC
23834]
Length = 377
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 177/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADAAVEKARELIAAFGSMVGKDLAKEVSCTEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LA+ GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|269960251|ref|ZP_06174626.1| carbamoyl-phosphate synthase, small subunit [Vibrio harveyi 1DA3]
gi|269835058|gb|EEZ89142.1| carbamoyl-phosphate synthase, small subunit [Vibrio harveyi 1DA3]
Length = 411
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 37 ALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 96
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 97 TNSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 156
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 157 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 213
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SNG
Sbjct: 214 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEDVLALNPDGVFLSNG 273
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 274 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 312
>gi|260436782|ref|ZP_05790752.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. WH
8109]
gi|260414656|gb|EEX07952.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. WH
8109]
Length = 386
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 177/275 (64%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG++ FG GT +GEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 15 KAYLVLADGTVLTGVGFGHRGTTIGEVVFNTGMTGYQEVLTDPSYAGQLVSFTYPELGNT 74
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DD+E+ + G++ R L+ SNWRC ++L +++ ++GI VDTRA+ R LR
Sbjct: 75 GVNADDQEADRPHARGVIARQLAPVPSNWRCEQSLESWMQTHQLVGISGVDTRALVRHLR 134
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G++ GV+S++ Q L + ++ + G++L V+ +EP++W ++ +D
Sbjct: 135 EVGAMNGVISSDGQTPAQLLELLKQAPSMQGLNLADRVTTREPYQWNQACSVGFDQRLQR 194
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R +RV+A DFGIK IL RL ++GC + V+P+ +PDGV SNGPGDP+
Sbjct: 195 RRDAPFRVVAIDFGIKRAILDRLVAHGCDVTVLPADTDLDTVRSHRPDGVFLSNGPGDPA 254
Query: 247 AVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
AV + +A+ K LL +P+FGIC+GHQ+LG ALG
Sbjct: 255 AVTHGIALAKLLLEESDLPLFGICLGHQILGLALG 289
>gi|386279083|ref|ZP_10056771.1| carbamoyl-phosphate synthase small chain [Escherichia sp. 4_1_40B]
gi|432532244|ref|ZP_19769254.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE234]
gi|432689821|ref|ZP_19925075.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE161]
gi|386123672|gb|EIG72261.1| carbamoyl-phosphate synthase small chain [Escherichia sp. 4_1_40B]
gi|431065269|gb|ELD74042.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE234]
gi|431232494|gb|ELF28160.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE161]
Length = 382
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGMPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|221201962|ref|ZP_03574998.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CGD2M]
gi|221204908|ref|ZP_03577925.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CGD2]
gi|221213885|ref|ZP_03586858.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CGD1]
gi|421470811|ref|ZP_15919161.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans ATCC BAA-247]
gi|221166062|gb|EED98535.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CGD1]
gi|221175765|gb|EEE08195.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CGD2]
gi|221178045|gb|EEE10456.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans CGD2M]
gi|400226880|gb|EJO56917.1| carbamoyl-phosphate synthase, small subunit [Burkholderia
multivorans ATCC BAA-247]
Length = 381
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRMERTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + S + +E++RS+ + G+DL VS PFEW ++ +W +
Sbjct: 128 KGAQNGCI-LAGSDDAAKAIELARSFPGLAGMDLAKVVSTTNPFEWKQT---EWRLGSGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + YRV+AYDFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQEAPKYRVVAYDFGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|336123383|ref|YP_004565431.1| carbamoyl-phosphate synthase small chain [Vibrio anguillarum 775]
gi|335341106|gb|AEH32389.1| Carbamoyl-phosphate synthase small chain [Vibrio anguillarum 775]
Length = 379
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R +L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESSSIHAQGLVIRDLPLIASNFRNELSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIMAGDHLDEALALVKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L LKPDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALKPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|300919582|ref|ZP_07136074.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
115-1]
gi|300413328|gb|EFJ96638.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
115-1]
Length = 391
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGMPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|212709134|ref|ZP_03317262.1| hypothetical protein PROVALCAL_00167 [Providencia alcalifaciens DSM
30120]
gi|422019701|ref|ZP_16366244.1| carbamoyl phosphate synthase small subunit [Providencia
alcalifaciens Dmel2]
gi|212688046|gb|EEB47574.1| hypothetical protein PROVALCAL_00167 [Providencia alcalifaciens DSM
30120]
gi|414102807|gb|EKT64397.1| carbamoyl phosphate synthase small subunit [Providencia
alcalifaciens Dmel2]
Length = 396
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G +GEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 11 INSAILVLEDGTQFHGRAIGAEGAAIGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES GL+IR L + SN+R E L YL N++ I D+DTR +TR
Sbjct: 71 NVGTNADDEESPNVHAQGLIIRDLPLIYSNFRGQEGLSEYLKRHNVVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +RS+ + G+DL +V KE + W T+ W+ +
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARSFSGLNGLDLAKEVCTKEIYSW---TQRSWNLD 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + V+AYDFG K NILR L GC++ VVP+T PA L + PDG+
Sbjct: 188 EGQPAASKEDELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ ++E L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAINAIQEFLKTDIPVFGICLGHQLLALASG 289
>gi|422806756|ref|ZP_16855187.1| carbamoyl-phosphate synthase [Escherichia fergusonii B253]
gi|324112567|gb|EGC06544.1| carbamoyl-phosphate synthase [Escherichia fergusonii B253]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAESYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|422783199|ref|ZP_16835983.1| carbamoyl-phosphate synthase [Escherichia coli TW10509]
gi|323975801|gb|EGB70897.1| carbamoyl-phosphate synthase [Escherichia coli TW10509]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAESYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|160900364|ref|YP_001565946.1| carbamoyl-phosphate synthase small subunit [Delftia acidovorans
SPH-1]
gi|160365948|gb|ABX37561.1| carbamoyl-phosphate synthase, small subunit [Delftia acidovorans
SPH-1]
Length = 388
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 184/284 (64%), Gaps = 15/284 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++ S GA GT VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN
Sbjct: 9 SAILALADGTVFVGNSIGAQGTTVGEVVFNTAITGYQEILTDPSYCQQIVTLTYPHIGNY 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I++L + SN+R +ETL +YL + I ++DTR +TR LR
Sbjct: 69 GVNAEDVEAGKVHAAGLIIKNLPLLASNFRKSETLPDYLTRSGTVAIANIDTRKLTRLLR 128
Query: 127 ----QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPD 179
Q+G+++G+ + EE ++ D+ L + + G+DL VS + +EW E+ +
Sbjct: 129 DKGAQNGAIVGLAAGEEVTQARIDEALAAAKAAPSMKGLDLAQVVSAAQQYEWTET---E 185
Query: 180 WDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
W ++ + + V+AYDFG+K NILR LA GC++ VVP+ PA + L L PDGV
Sbjct: 186 WKLGEGYGQQQAPRFHVVAYDFGVKFNILRMLAERGCKLTVVPAKTPAKDVLALNPDGVF 245
Query: 238 FSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A KEL+ GK PVFGIC+GHQ++ A G
Sbjct: 246 LSNGPGDPEPCDYAIAATKELVESGK-PVFGICLGHQIMALAAG 288
>gi|432858336|ref|ZP_20084832.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE146]
gi|431408579|gb|ELG91762.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE146]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYRWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|422828364|ref|ZP_16876535.1| carbamoyl-phosphate synthase small subunit [Escherichia coli B093]
gi|371614400|gb|EHO02884.1| carbamoyl-phosphate synthase small subunit [Escherichia coli B093]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|432752863|ref|ZP_19987434.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE29]
gi|431291521|gb|ELF82024.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE29]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEYLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|418945159|ref|ZP_13498072.1| carbamoyl phosphate synthase small subunit, partial [Escherichia
coli O157:H43 str. T22]
gi|375319526|gb|EHS65660.1| carbamoyl phosphate synthase small subunit, partial [Escherichia
coli O157:H43 str. T22]
Length = 352
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W T+ W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSW---TQGSWTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|422776672|ref|ZP_16830326.1| carbamoyl-phosphate synthase [Escherichia coli H120]
gi|323945769|gb|EGB41816.1| carbamoyl-phosphate synthase [Escherichia coli H120]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRELTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|291613524|ref|YP_003523681.1| carbamoyl-phosphate synthase, small subunit [Sideroxydans
lithotrophicus ES-1]
gi|291583636|gb|ADE11294.1| carbamoyl-phosphate synthase, small subunit [Sideroxydans
lithotrophicus ES-1]
Length = 374
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 178/276 (64%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R + GASG+ VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 7 AILVLADGTVFRGTAIGASGSSVGEVVFNTSITGYQEILTDPSYCRQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ESRQ F +GL+IR LS+ SN+R ++L YL N++ I +DTR +TR LR
Sbjct: 67 CNPEDVESRQVFASGLIIRDLSMTVSNFRSTQSLPEYLKANNVVAIAGIDTRKLTRILRS 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G ++T + + L +R + + G+DL V+ + ++W T+ +W
Sbjct: 127 KGAQNGCIAT--GNNVEAALAAARGFAGLAGMDLAQVVTCDKSYQW---TQREWKLGEGF 181
Query: 187 RN--SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
R+ + V+AYDFG+K NILR LA GC+I VVP+ A + L L+PDGV SNGPGD
Sbjct: 182 RDVAESKFHVVAYDFGVKRNILRMLAERGCRITVVPAKTAAVDVLALQPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+A + L VP+FGIC+GHQ+LG A G
Sbjct: 242 PEPCDYAIAATQRFLEAGVPLFGICLGHQILGLASG 277
>gi|85712940|ref|ZP_01043980.1| Carbamoylphosphate synthase small subunit [Idiomarina baltica
OS145]
gi|85693246|gb|EAQ31204.1| Carbamoylphosphate synthase small subunit [Idiomarina baltica
OS145]
Length = 381
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/274 (48%), Positives = 178/274 (64%), Gaps = 4/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+I+ + GA G+ VGEVVFNT++TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 12 AILVLADGTIFHGTAIGAEGSAVGEVVFNTAMTGYQEILTDPSYTEQLVTLTYPHIGNTG 71
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + + GL+IR ++ S++R ETL YL +N++GI D+DTR +TR LR+
Sbjct: 72 TNNEDEESPEVWAKGLIIRDNALKASSFRKQETLTEYLQRQNVVGIADIDTRKLTRILRE 131
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + D+ L+++R + + G+DL VS +E W E + + +T
Sbjct: 132 KGAQNGCIMAGPIDEDKA-LQLAREFPGLKGMDLAKVVSCEETHAWSEGSWQLGEGHTSP 190
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
K + V+AYD+G K NILR LA GC+I VVP+ A E + L PDGV SNGPGDP
Sbjct: 191 AQDK-FHVVAYDYGCKQNILRLLADRGCRITVVPAQTSADEVMALNPDGVFLSNGPGDPE 249
Query: 247 AVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ +K LL K +P+FGIC+GHQLLG A G
Sbjct: 250 PCDYAIDAIKALLEKDIPIFGICLGHQLLGIASG 283
>gi|445423383|ref|ZP_21436621.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter sp.
WC-743]
gi|444755763|gb|ELW80338.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter sp.
WC-743]
Length = 384
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG++++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTVFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG YL + N++ I D+DTR +TR
Sbjct: 65 CNEEDTESGRIHKVWANGLIIRDLPLLHSNFRANQSLGEYLKQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E + +R++ + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAQARAFGGLNGLDLAKECCDPEGFEWTEGS---WTLG 181
Query: 184 THERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+T + V+AYD+G+K NILR L GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 KGFSQPETKFHVVAYDYGVKTNILRMLVDRGCKLTVVPAQTPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTNLPVFGICLGHQILALASG 280
>gi|386823097|ref|ZP_10110252.1| carbamoyl phosphate synthase small subunit [Serratia plymuthica
PRI-2C]
gi|386379884|gb|EIJ20666.1| carbamoyl phosphate synthase small subunit [Serratia plymuthica
PRI-2C]
Length = 382
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 172/282 (60%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDAESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S L ++ + + G+DL +V+ KE + W + + W
Sbjct: 122 LREKGAQNGCIIAADSPDAALALAKAQGFPGLKGMDLAKEVTTKEAYSWQQGS---WTLE 178
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GDLPEAKPASDLPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPADEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKQFLETDIPVFGICLGHQLLALASG 280
>gi|209917223|ref|YP_002291307.1| carbamoyl phosphate synthase small subunit [Escherichia coli SE11]
gi|293408124|ref|ZP_06651964.1| carbamoyl-phosphate synthase [Escherichia coli B354]
gi|293417907|ref|ZP_06660529.1| carbamoyl-phosphate synthase [Escherichia coli B185]
gi|300816066|ref|ZP_07096289.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
107-1]
gi|300821964|ref|ZP_07102108.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
119-7]
gi|300905434|ref|ZP_07123201.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
84-1]
gi|300924020|ref|ZP_07140020.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
182-1]
gi|300928671|ref|ZP_07144190.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
187-1]
gi|301305078|ref|ZP_07211179.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
124-1]
gi|301330202|ref|ZP_07222862.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
78-1]
gi|309797798|ref|ZP_07692182.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
145-7]
gi|331680602|ref|ZP_08381261.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H591]
gi|332281282|ref|ZP_08393695.1| carbamoyl-phosphate synthase subunit small [Shigella sp. D9]
gi|415863271|ref|ZP_11536562.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
85-1]
gi|415873132|ref|ZP_11540410.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
79-10]
gi|422354339|ref|ZP_16435081.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
117-3]
gi|422788272|ref|ZP_16841009.1| carbamoyl-phosphate synthase [Escherichia coli H489]
gi|422792683|ref|ZP_16845382.1| carbamoyl-phosphate synthase [Escherichia coli TA007]
gi|209910482|dbj|BAG75556.1| carbamoyl-phosphate synthase small subunit [Escherichia coli SE11]
gi|291430625|gb|EFF03623.1| carbamoyl-phosphate synthase [Escherichia coli B185]
gi|291472375|gb|EFF14857.1| carbamoyl-phosphate synthase [Escherichia coli B354]
gi|300402712|gb|EFJ86250.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
84-1]
gi|300419744|gb|EFK03055.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
182-1]
gi|300463340|gb|EFK26833.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
187-1]
gi|300525564|gb|EFK46633.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
119-7]
gi|300531273|gb|EFK52335.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
107-1]
gi|300839685|gb|EFK67445.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
124-1]
gi|300843764|gb|EFK71524.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
78-1]
gi|308118627|gb|EFO55889.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
145-7]
gi|315255694|gb|EFU35662.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
85-1]
gi|323959980|gb|EGB55626.1| carbamoyl-phosphate synthase [Escherichia coli H489]
gi|323970705|gb|EGB65959.1| carbamoyl-phosphate synthase [Escherichia coli TA007]
gi|324017701|gb|EGB86920.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
117-3]
gi|331072065|gb|EGI43401.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H591]
gi|332103634|gb|EGJ06980.1| carbamoyl-phosphate synthase subunit small [Shigella sp. D9]
gi|342931169|gb|EGU99891.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
79-10]
Length = 391
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|218698452|ref|YP_002406081.1| carbamoyl phosphate synthase small subunit [Escherichia coli IAI39]
gi|386622446|ref|YP_006142174.1| carbamoyl phosphate synthase small subunit [Escherichia coli O7:K1
str. CE10]
gi|432600543|ref|ZP_19836799.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE66]
gi|432678440|ref|ZP_19913845.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE143]
gi|218368438|emb|CAR16174.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli IAI39]
gi|349736184|gb|AEQ10890.1| carbamoyl phosphate synthase small subunit [Escherichia coli O7:K1
str. CE10]
gi|431144582|gb|ELE46276.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE66]
gi|431225396|gb|ELF22596.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE143]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|419956700|ref|ZP_14472767.1| carbamoyl phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae GS1]
gi|388608457|gb|EIM37660.1| carbamoyl phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae GS1]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNLDATLALEKAKAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLE 178
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 179 GDLPEAKPESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIAAIKSFLETDIPVFGICLGHQLLALASG 280
>gi|419919079|ref|ZP_14437247.1| carbamoyl phosphate synthase small subunit [Escherichia coli KD2]
gi|432546349|ref|ZP_19783161.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE236]
gi|432546754|ref|ZP_19783554.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE237]
gi|432624998|ref|ZP_19860997.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE76]
gi|432717044|ref|ZP_19952049.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE9]
gi|432768839|ref|ZP_20003219.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE50]
gi|432818253|ref|ZP_20051980.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE115]
gi|432856843|ref|ZP_20084094.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE144]
gi|432958761|ref|ZP_20149619.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE202]
gi|433061240|ref|ZP_20248214.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE125]
gi|388388742|gb|EIL50300.1| carbamoyl phosphate synthase small subunit [Escherichia coli KD2]
gi|431068131|gb|ELD76636.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE236]
gi|431086566|gb|ELD92588.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE237]
gi|431153064|gb|ELE53983.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE76]
gi|431267907|gb|ELF59422.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE9]
gi|431320232|gb|ELG07875.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE50]
gi|431359242|gb|ELG45887.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE115]
gi|431395351|gb|ELG78863.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE144]
gi|431483256|gb|ELH62948.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE202]
gi|431589519|gb|ELI60733.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE125]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|258620886|ref|ZP_05715920.1| carbamoyl-phosphate synthase, small subunit [Vibrio mimicus VM573]
gi|258586274|gb|EEW10989.1| carbamoyl-phosphate synthase, small subunit [Vibrio mimicus VM573]
Length = 379
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEKSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL V+ +E ++W + + W
Sbjct: 124 EKGAQNGCIMAGDKLDEALALAKAKEFPGLKGMDLAKVVTTQEAYQWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADCDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|401762222|ref|YP_006577229.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae ENHKU01]
gi|400173756|gb|AFP68605.1| carbamoyl-phosphate synthase small subunit [Enterobacter cloacae
subsp. cloacae ENHKU01]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 179/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRSTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDF 182
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W + + + D
Sbjct: 122 LREKGAQNGCIIAGDNLDATLALEKAKAFPGLNGMDLAKEVTTAEAYSWTQGSWTLEGDL 181
Query: 183 NTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++ S+ + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+ SNG
Sbjct: 182 PEAKKESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAKTSAEDVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAIDAIKSFLETDIPVFGICLGHQLLALASG 280
>gi|300939444|ref|ZP_07154106.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
21-1]
gi|300455665|gb|EFK19158.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
21-1]
Length = 391
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|289663387|ref|ZP_06484968.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. vasculorum NCPPB 702]
gi|289668841|ref|ZP_06489916.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. musacearum NCPPB 4381]
Length = 377
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 174/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+R+ + AGL++R + SNWR L +L R ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEARKIWAAGLIVRDVPRRPSNWRSQVALPEWLQARGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L E ++ L + + G+DL VS + + W E + D + + +
Sbjct: 125 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTESTYSWQEG-QLDLNADAFVQ 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+AYD+G+K NILR LA GC + VVP+ P +E + L+PDGV SNGPGDP
Sbjct: 184 AELKYKVVAYDYGVKLNILRMLAERGCDVTVVPARTPVAEVMALQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +K+L+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAIDAIKQLIAQKVPTFGICLGHQLLALASG 276
>gi|331671551|ref|ZP_08372349.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA280]
gi|331071396|gb|EGI42753.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TA280]
Length = 391
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|301648402|ref|ZP_07248138.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
146-1]
gi|331640481|ref|ZP_08341629.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H736]
gi|301073537|gb|EFK88343.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
146-1]
gi|331040227|gb|EGI12434.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli H736]
Length = 391
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|407790489|ref|ZP_11137583.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Gallaecimonas xiamenensis 3-C-1]
gi|407204037|gb|EKE74019.1| carbamoyl phosphate synthetase, glutamine amidotransferase small
subunit [Gallaecimonas xiamenensis 3-C-1]
Length = 376
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 170/277 (61%), Gaps = 8/277 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R + GA+G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFRGTAIGATGKAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + GLVIR L + SN+R +L +YL RNI+ I D+DTR +TR LR+
Sbjct: 65 TNAEDEESSTIWATGLVIRDLPLVASNFRNQASLSDYLKARNIVAIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWD----FN 183
G+ G + + L + G+DL V KE + W E + W F
Sbjct: 125 KGAQNGCIIAGLVDEAEALAAAKAFPGLKGMDLAKVVCTKESYGWTEGS---WTLGEGFK 181
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ Y V+AYDFG+K NILR LA GC++ VVP+ A+E L L PDG+ SNGPG
Sbjct: 182 QFGDDHFKYHVVAYDFGVKQNILRMLADRGCKLTVVPAQTSAAEVLALNPDGIFLSNGPG 241
Query: 244 DPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
DP YA+ +K L PVFGIC+GHQLL A G
Sbjct: 242 DPEPCTYAIDAIKAFLETDTPVFGICLGHQLLALASG 278
>gi|403050925|ref|ZP_10905409.1| carbamoyl phosphate synthase small subunit [Acinetobacter
bereziniae LMG 1003]
Length = 384
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 180/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG++++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTVFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG YL + N++ I D+DTR +TR
Sbjct: 65 CNEEDTESGRIHKVWANGLIIRDLPLLHSNFRANQSLGEYLEQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E + +R++ + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAQARAFGGLNGLDLAKECCDPEGFEWTEGS---WTLG 181
Query: 184 THERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+T + V+AYD+G+K NILR L GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 KGFSQPETKFHVVAYDYGVKTNILRMLVDRGCKLTVVPAQTPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTNLPVFGICLGHQILALASG 280
>gi|157962893|ref|YP_001502927.1| carbamoyl phosphate synthase small subunit [Shewanella pealeana
ATCC 700345]
gi|157847893|gb|ABV88392.1| carbamoyl-phosphate synthase, small subunit [Shewanella pealeana
ATCC 700345]
Length = 381
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 175/280 (62%), Gaps = 11/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+I+ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTIFSGTAIGAEGMSVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R ++L +YL N++GI D+DTR +TR LR
Sbjct: 64 GTNDEDTESDSVHACGLIIRDLPLIASNFRNQQSLSDYLVANNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
+ G+ G + + + L + G+DL +V+ E + W + W
Sbjct: 124 EKGAQAGCIMVGDLDEAKALAAAKAFPGLKGMDLAKEVTTNETYSWRSGS---WRLVGGL 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+T E K Y+V+AYD+G+K NILR L GC + VVP+ PA+E L + PDGV SN
Sbjct: 181 PSDTPEAELK-YKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPAAEVLAMNPDGVFLSN 239
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+A ++E+L +PVFGIC+GHQLL A G
Sbjct: 240 GPGDPEPCDYAIAAIQEILKTDIPVFGICLGHQLLALASG 279
>gi|186475638|ref|YP_001857108.1| carbamoyl phosphate synthase small subunit [Burkholderia phymatum
STM815]
gi|184192097|gb|ACC70062.1| carbamoyl-phosphate synthase, small subunit [Burkholderia phymatum
STM815]
Length = 384
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 188/281 (66%), Gaps = 14/281 (4%)
Query: 6 ANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGN 65
++A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN
Sbjct: 6 SSALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGN 65
Query: 66 TGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRL 125
GVN +D E+ + AGL+IR L I SN+R TL +YL ++ I +DTR +TR L
Sbjct: 66 VGVNAEDVEATKVHAAGLIIRDLPILASNFRMERTLPDYLKAEGVVAIAGIDTRKLTRVL 125
Query: 126 RQDGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
R G+ G + S +E+K+ +E++RS+ + G+DL VS ++P+EW ++ +W
Sbjct: 126 RDKGAQNGAILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTQKPYEWKQT---EWR 178
Query: 182 FNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+ +N+ YRV+A+D+G+K+NILR LA GCQ+ V+P+ A++ L L PDGV S
Sbjct: 179 LGSGYGMQNTPRYRVVAFDYGVKYNILRMLAERGCQVTVLPAQASAADALALNPDGVFLS 238
Query: 240 NGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
NGPGDP YA+A +E + + +P FGIC+GHQ++G A+G
Sbjct: 239 NGPGDPEPCDYAIAATREFIERGIPTFGICLGHQIMGLAVG 279
>gi|170683312|ref|YP_001742149.1| carbamoyl phosphate synthase small subunit [Escherichia coli
SMS-3-5]
gi|301019784|ref|ZP_07183928.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
69-1]
gi|170521030|gb|ACB19208.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
SMS-3-5]
gi|300399071|gb|EFJ82609.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
69-1]
Length = 391
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|78485223|ref|YP_391148.1| carbamoyl-phosphate synthase small subunit [Thiomicrospira
crunogena XCL-2]
gi|78363509|gb|ABB41474.1| carbamoyl-phosphate synthase small subunit [Thiomicrospira
crunogena XCL-2]
Length = 378
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 176/275 (64%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L LEDG+++ S GA G VGEVVFNTSLTGYQEILTDPSY Q V +T PHIGN
Sbjct: 4 TALLALEDGTLFWGISLGAEGETVGEVVFNTSLTGYQEILTDPSYYKQIVTLTYPHIGNV 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +DEES GL++R SN+R ++L +YL E+ ++ I D+DTR +TR LR
Sbjct: 64 GVNEEDEESPSIMAQGLIVRDCPPLMSNFRAQKSLPDYLKEQGVVAISDIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ GV+ E+ + ++++ + G+DL +V+ E + W E T + +T
Sbjct: 124 DKGAQSGVIVAGENIDADAAIAKAKTFAGLKGMDLAKEVTTSETYVWTEGTWSLENGHTD 183
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ Y V+A+D+GIK NILR LA GC++ VVP+ PASE L +KPDG+ SNGPGDP
Sbjct: 184 CASKSEYHVVAFDYGIKRNILRMLADRGCKLTVVPAKTPASEVLAMKPDGIFLSNGPGDP 243
Query: 246 SAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
YA+ ++E+L +PVFGIC+GHQLL A G
Sbjct: 244 EPCDYAIQAIQEVLRTDIPVFGICLGHQLLALASG 278
>gi|78212683|ref|YP_381462.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
CC9605]
gi|78197142|gb|ABB34907.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
CC9605]
Length = 386
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/275 (44%), Positives = 178/275 (64%), Gaps = 2/275 (0%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG++ FG GT +GEVVFNT +TGYQE+LTDPSYAGQ V T P +GNT
Sbjct: 15 KAYLVLADGTVLTGVGFGHRGTTIGEVVFNTGMTGYQEVLTDPSYAGQLVSFTYPELGNT 74
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DD+E+ + G++ R L SNWRC +TL +++ ++GI +DTRA+ R LR
Sbjct: 75 GVNADDQEADRPHARGVIARQLVPLPSNWRCEQTLESWMQTHQLVGISGLDTRALVRHLR 134
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
+ G++ GV+S++ Q L + ++ + G++L V+ K+P++W ++ +D
Sbjct: 135 EVGAMNGVISSDGQTPAQLLELLKQAPSMQGLNLADRVTTKQPYQWNQACSVGFDQRLQR 194
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R+ +RV+A DFGIK IL RL ++GC + V+P+ + +PDGV SNGPGDP+
Sbjct: 195 RSDAPFRVVAIDFGIKRAILDRLVAHGCDVTVLPADTDLATVRSHRPDGVFLSNGPGDPA 254
Query: 247 AVPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
AV +A+ K LL + +P+FGIC+GHQ+LG ALG
Sbjct: 255 AVSQGIALAKSLLDESDLPLFGICLGHQILGLALG 289
>gi|89345526|gb|ABD69729.1| carbamoyl-phosphate synthase small subunit [Rhodoferax
ferrireducens T118]
Length = 417
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 180/294 (61%), Gaps = 22/294 (7%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
NV A L L DG+++ S GA+G+ VGEVVFNT++TGYQEILTDPSY Q V +T PHI
Sbjct: 30 NVPPAILALADGTVYVGHSIGAAGSTVGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHI 89
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVNFDD E+ + +AGLVI+ L + SN+R +LG+YL + I ++DTR +TR
Sbjct: 90 GNYGVNFDDVEADKVHVAGLVIKDLPLLASNFRQTMSLGDYLVREGTVAIANIDTRKLTR 149
Query: 124 RLRQDGSLIGVL-------STEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
+LR G+ G + + +S D+ + + + G+DL V+ KEP+ W ++
Sbjct: 150 QLRSQGAQNGCIMALAQGEAVTQSLIDKAIALAQAAPAMAGLDLARVVTVKEPYAWTQTE 209
Query: 177 ----------KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPAS 226
KP + E + V+AYDFGIK NILR LA GC++ VVP+ PA
Sbjct: 210 WRLSQPVLGGKPGYG----ELTKPKFHVVAYDFGIKKNILRMLAERGCRVTVVPAQTPAF 265
Query: 227 ETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+ LK +PDG+ SNGPGDP YA+A V EL+ +P FGIC+GHQ++ A G
Sbjct: 266 DALKYQPDGIFLSNGPGDPQPCDYAIAAVAELIESGIPTFGICLGHQIMALASG 319
>gi|422971568|ref|ZP_16974843.1| carbamoyl-phosphate synthase small chain [Escherichia coli TA124]
gi|371598644|gb|EHN87441.1| carbamoyl-phosphate synthase small chain [Escherichia coli TA124]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + + LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDKPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|359430257|ref|ZP_09221269.1| carbamoyl-phosphate synthase small chain [Acinetobacter sp. NBRC
100985]
gi|358234307|dbj|GAB02808.1| carbamoyl-phosphate synthase small chain [Acinetobacter sp. NBRC
100985]
Length = 379
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGCTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDVESGRIHKVWANGLIIRDLPLLHSNFRSEQSLSEYLEQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR G+ G + E+ +++E + +R + + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAKAREFGGLTGLDLAKECCDPEGFEWTEGS---WTLG 181
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
N + Y V+AYD+G+K NILR LA GC++ VVP+ P + L L PDGV SNGP
Sbjct: 182 NGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPIEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG--KVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK L+ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTLVDTTNLPVFGICLGHQILALASG 280
>gi|251788194|ref|YP_003002915.1| carbamoyl-phosphate synthase small subunit [Dickeya zeae Ech1591]
gi|247536815|gb|ACT05436.1| carbamoyl-phosphate synthase, small subunit [Dickeya zeae Ech1591]
Length = 381
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGAAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E+L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGANKADEESPAVHAQGLVIRDLPLIASNYRSEESLSDYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ + + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAALALEKAKAFPGLKGMDLAKEVTTRSSYSWLQGS---WTLE 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
E + Y V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDGV
Sbjct: 179 GELPAAKEESELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGVFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIKAIKAFLETDIPVFGICLGHQLLALASG 280
>gi|432529334|ref|ZP_19766393.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE233]
gi|431058152|gb|ELD67561.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE233]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGMPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPIFGICLGHQLLALASG 280
>gi|333984957|ref|YP_004514167.1| carbamoyl-phosphate synthase small subunit [Methylomonas methanica
MC09]
gi|333808998|gb|AEG01668.1| carbamoyl-phosphate synthase, small subunit [Methylomonas methanica
MC09]
Length = 377
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 172/279 (61%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+ + S GA G VGEVVFNT+LTGYQEIL+DPSYA Q V +T PHIGN G
Sbjct: 5 ALLVLEDGTEFHGISIGADGCSVGEVVFNTALTGYQEILSDPSYARQIVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D+ES F +GLV+R L + NWR +TL YL E ++ I D+DTR +TR LR
Sbjct: 65 TNSEDDESAGVFASGLVVRDLPLLACNWRSEKTLPEYLWENKVVAIADIDTRKLTRLLRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD----IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + E +L R+ D + G+DL +V+ +EW ES W
Sbjct: 125 KGAQRGCIMAGERI---DLEAAKRAIDDFPGLQGLDLAREVTTSCRYEWTESV---WKLG 178
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
E V+AYDFG+K NILR L S GC++ VVP+T PA E L + PDGV SNG
Sbjct: 179 EGHAEVADLPKHVVAYDFGVKRNILRLLVSRGCRVTVVPATTPAEEVLAMNPDGVFLSNG 238
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+A +K +L K+PVFGIC+GHQLL A G
Sbjct: 239 PGDPEPCDYAIAAIKTILERKIPVFGICLGHQLLALASG 277
>gi|262371953|ref|ZP_06065232.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter junii
SH205]
gi|262311978|gb|EEY93063.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter junii
SH205]
Length = 379
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDVESGRIHKVWANGLIIRDLPLLHSNFRSEQSLSEYLQQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E+ +++E + +R + + G+DL + E FEW E + W
Sbjct: 125 LREKGAQNGCILAGENITEEEAIAKAREFGGLNGLDLAKECCDPEGFEWTEGS---WALG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 KGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|419921930|ref|ZP_14439963.1| carbamoyl phosphate synthase small subunit [Escherichia coli
541-15]
gi|388397059|gb|EIL58101.1| carbamoyl phosphate synthase small subunit [Escherichia coli
541-15]
Length = 382
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAVLALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|390575957|ref|ZP_10256037.1| carbamoyl phosphate synthase small subunit [Burkholderia terrae
BS001]
gi|420256108|ref|ZP_14758969.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp. BT03]
gi|389932098|gb|EIM94146.1| carbamoyl phosphate synthase small subunit [Burkholderia terrae
BS001]
gi|398043822|gb|EJL36693.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp. BT03]
Length = 384
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 183/276 (66%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL +YL ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERTLPDYLKAEGVVAIAGIDTRKLTRVLRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + S + + +E++RS+ + G+DL VS ++P+EW ++ +W +
Sbjct: 128 KGAQNGAI-LAGSDDEAQAIELARSFPGLAGMDLAKVVSTQKPYEWKQT---EWRLGSGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+N+ YRV+A+DFG+K+NILR LA GCQ+ V+P+ A++ L L PDG+ SNGPGD
Sbjct: 184 GMQNTPRYRVVAFDFGVKYNILRMLAERGCQVTVLPAQATAADALALNPDGIFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+A +E + + +P FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATREFIERGIPTFGICLGHQIMGLAVG 279
>gi|395236391|ref|ZP_10414586.1| carbamoyl phosphate synthase small subunit [Enterobacter sp. Ag1]
gi|394728818|gb|EJF28853.1| carbamoyl phosphate synthase small subunit [Enterobacter sp. Ag1]
Length = 382
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 181/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GASGT VGEVVFNTSLTGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGASGTAVGEVVFNTSLTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRSQEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDF 182
LR+ G+ G + ++ LE ++++ + G+DL +V+ KE + W + + + D
Sbjct: 122 LREKGAQNGCIIAGDNVDAALALEKAKAFPGLNGMDLAKEVTTKEAYTWQQGSWTLEGDL 181
Query: 183 NTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + V+AYD+G K NILR L GC++ VVP+ PA + LK+ PDG+ SNG
Sbjct: 182 PEAAKTEELPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPAEDVLKMNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA++ +K L ++PVFGIC+GHQLL A G
Sbjct: 242 PGDPAPCDYAISAIKSFLETEIPVFGICLGHQLLALASG 280
>gi|337279396|ref|YP_004618868.1| carbamoyl-phosphate synthase small chain [Ramlibacter tataouinensis
TTB310]
gi|334730473|gb|AEG92849.1| candidate carbamoyl-phosphate synthase small chain
(Carbamoyl-phosphate synthase (glutamine-hydrolyzing))
[Ramlibacter tataouinensis TTB310]
Length = 387
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 181/282 (64%), Gaps = 13/282 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++ S GA+G+ GEVVFNT++TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 10 AILALADGTVFLGTSIGAAGSTSGEVVFNTAITGYQEILTDPSYCRQIVTLTYPHIGNYG 69
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR- 126
VN +D E+ + AGL+IR L + SN+R + TL YL N +GI D+DTR +TR LR
Sbjct: 70 VNEEDVEASKVHAAGLIIRDLPLVASNFRTSLTLSQYLQRENTVGIADIDTRKLTRLLRT 129
Query: 127 ---QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
Q+G ++ + +E + DQ + + ++ + G DL DVS +P++W T+ +W
Sbjct: 130 QGAQNGCILALQPGQEVTPALVDQAVAQARKAPAMTGQDLAKDVSVGQPYDW---TQTEW 186
Query: 181 DFNTHERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + +T Y V+A+D+G+K NILR LA GC++ VVP+ PA+E KLKPDGV
Sbjct: 187 ELGSGYGKLETPRYHVVAFDYGVKKNILRMLAERGCKVTVVPARTPAAEVRKLKPDGVFL 246
Query: 239 SNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +EL+ + P FGIC+GHQ+L A G
Sbjct: 247 SNGPGDPQPCEYAIEATRELVEEGYPTFGICLGHQILALASG 288
>gi|365096699|ref|ZP_09331142.1| carbamoyl-phosphate synthase small subunit [Acidovorax sp. NO-1]
gi|363413725|gb|EHL20917.1| carbamoyl-phosphate synthase small subunit [Acidovorax sp. NO-1]
Length = 388
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/286 (44%), Positives = 181/286 (63%), Gaps = 13/286 (4%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N A L L DG+++ S GA+GT VGEVVFNT++TGYQEILTDPSY Q V +T PHI
Sbjct: 6 NFPPAILALADGTVFIGNSIGATGTTVGEVVFNTAITGYQEILTDPSYCQQIVTLTYPHI 65
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVN +D E+ + AGL+I+ L + SN+R ETL YL + I ++DTR +TR
Sbjct: 66 GNYGVNVEDIEADKVHAAGLIIKDLPLLASNFRSTETLSQYLVREKTVAIANIDTRKLTR 125
Query: 124 RLR----QDGSLIGVLSTE---ESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
LR Q+G++IG+ + + ++ D+ + + + ++ G+DL V+ +EW T
Sbjct: 126 LLRSKGAQNGAIIGLAAGQAVTQALIDEAIAKAKAAPNMAGLDLAQVVTTAARYEW---T 182
Query: 177 KPDWDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
+ +W T E + + V+AYDFG+K NILR LA GC++ VVP+ PA+E L +KPD
Sbjct: 183 QTEWKLGTGYGELSVPQFHVVAYDFGVKKNILRMLAERGCKVTVVPAKTPAAEVLAMKPD 242
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GV SNGPGDP YA+A + ++ +P FGIC+GHQ++ A G
Sbjct: 243 GVFLSNGPGDPEPCDYAIAATRTIVDSGMPTFGICLGHQIMALAAG 288
>gi|358011500|ref|ZP_09143310.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp.
P8-3-8]
Length = 379
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 181/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG++++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTVFKGISIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++LG+YL + N++ I D+DTR +TR
Sbjct: 65 CNDEDVESGRIHKVWANGLIIRDLPLLHSNFRSNQSLGDYLQQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ + +E +E +R++ + G+DL + E FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITAEEAIEKARAFGGLNGLDLAKECCDPEGFEWTEGS---WALG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ + V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 KGFSQPEAKFHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTNLPVFGICLGHQILALASG 280
>gi|90022374|ref|YP_528201.1| carbamoyl-phosphate synthase small subunit [Saccharophagus
degradans 2-40]
gi|89951974|gb|ABD81989.1| carbamoyl-phosphate synthase small subunit [Saccharophagus
degradans 2-40]
Length = 387
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 173/276 (62%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 14 AILVLADGSVFRGTAIGADGDSVGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTG 73
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D+E + +GLVIR +++ +SN+R +TL ++L +NI+GI D+DTR +TR LR
Sbjct: 74 TTSEDDECSNVWASGLVIRDMTMVSSNFRSEQTLEDFLKSKNIVGIADIDTRRLTRILRD 133
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT--- 184
G+ G + E D L + + G+DL VS ++ + W T W
Sbjct: 134 KGAQSGCIMAGEVDEDIALAKAKAFAGLQGMDLAKVVSTEKAYPW---TAGSWQLGKGFG 190
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++V+AYDFG K NILR L GC++ VVP+ PA++ L + PDGV SNGPGD
Sbjct: 191 GLPEGDRFKVVAYDFGAKANILRMLVDRGCELTVVPAQTPAADVLAMNPDGVFLSNGPGD 250
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ +K LL K +P+FGIC+GHQLL A G
Sbjct: 251 PEPCDYAIEAIKTLLDKNIPLFGICLGHQLLALASG 286
>gi|157368958|ref|YP_001476947.1| carbamoyl phosphate synthase small subunit [Serratia proteamaculans
568]
gi|157320722|gb|ABV39819.1| carbamoyl-phosphate synthase, small subunit [Serratia
proteamaculans 568]
Length = 382
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 174/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSAVHAQGLVIRDLPLIASNYRNEEGLSDYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ L ++ + + G+DL +V+ +E + W + + W
Sbjct: 122 LREKGAQNGCIIAADTPDAALALAKAKGFPGLKGMDLAKEVTTQEAYSWQQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GELPEAKAASELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPADEVLKMAPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKQFLETDIPVFGICLGHQLLALASG 280
>gi|325922456|ref|ZP_08184223.1| carbamoyl-phosphate synthase small subunit [Xanthomonas gardneri
ATCC 19865]
gi|325547076|gb|EGD18163.1| carbamoyl-phosphate synthase small subunit [Xanthomonas gardneri
ATCC 19865]
Length = 377
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 179/274 (65%), Gaps = 4/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+ + + AGL++R + S+WR L +L R ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEATKIWAAGLIVRDVPRRPSSWRSEVALPEWLQARGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G L E ++ LE +RS+ + G+DL VS + + W E + D + +T
Sbjct: 125 RGAQNGALMAGEIDVEKA-LEAARSFPGLKGMDLAKVVSTETSYTWQEGSL-DLNSDTFV 182
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
R Y+V+AYD+G+K NILR LA GC + VVP+ P +E L ++PDGV SNGPGDP
Sbjct: 183 RAELKYKVVAYDYGVKLNILRMLADRGCDVTVVPARTPVAEVLAMQPDGVFLSNGPGDPE 242
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA++ ++EL+ KVP FGIC+GHQLL A G
Sbjct: 243 PCDYAISAIQELIAKKVPTFGICLGHQLLALAAG 276
>gi|420378191|ref|ZP_14877696.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
225-75]
gi|391307780|gb|EIQ65507.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
225-75]
Length = 382
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSALGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKHHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|162289254|ref|YP_523260.2| carbamoyl phosphate synthase small subunit [Rhodoferax
ferrireducens T118]
Length = 393
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 180/294 (61%), Gaps = 22/294 (7%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
NV A L L DG+++ S GA+G+ VGEVVFNT++TGYQEILTDPSY Q V +T PHI
Sbjct: 6 NVPPAILALADGTVYVGHSIGAAGSTVGEVVFNTAMTGYQEILTDPSYCQQIVTLTYPHI 65
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVNFDD E+ + +AGLVI+ L + SN+R +LG+YL + I ++DTR +TR
Sbjct: 66 GNYGVNFDDVEADKVHVAGLVIKDLPLLASNFRQTMSLGDYLVREGTVAIANIDTRKLTR 125
Query: 124 RLRQDGSLIGVL-------STEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
+LR G+ G + + +S D+ + + + G+DL V+ KEP+ W ++
Sbjct: 126 QLRSQGAQNGCIMALAQGEAVTQSLIDKAIALAQAAPAMAGLDLARVVTVKEPYAWTQTE 185
Query: 177 ----------KPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPAS 226
KP + E + V+AYDFGIK NILR LA GC++ VVP+ PA
Sbjct: 186 WRLSQPVLGGKPGYG----ELTKPKFHVVAYDFGIKKNILRMLAERGCRVTVVPAQTPAF 241
Query: 227 ETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
+ LK +PDG+ SNGPGDP YA+A V EL+ +P FGIC+GHQ++ A G
Sbjct: 242 DALKYQPDGIFLSNGPGDPQPCDYAIAAVAELIESGIPTFGICLGHQIMALASG 295
>gi|358638083|dbj|BAL25380.1| carbamoyl phosphate synthase, small subunit [Azoarcus sp. KH32C]
Length = 380
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 176/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++ K GA+G+ VGEVVFNTS++GYQEILTDPSY Q V +T PHIGNTG
Sbjct: 7 ALLALADGTVFFGKGIGAAGSTVGEVVFNTSMSGYQEILTDPSYCRQIVTLTYPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D E+ + AGLVIR L I SN+R +TL YL N++ I +DTR +TR LR+
Sbjct: 67 INREDVEATRVHAAGLVIRDLPILPSNFRMEQTLDAYLKAENVVAIAGIDTRKLTRILRE 126
Query: 128 DGSLIGVLSTE---ESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + T ++ + + + +R + + G+DL VS F W E +W
Sbjct: 127 KGAQAGCIVTAGEGQALNPEAAVAQARDFPGLAGMDLAKVVSTDRSFPWTEG---EWKLG 183
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + V+AYDFG+K NILR LAS GC++ VVP+ PA E L L PDG+ SNG
Sbjct: 184 AGYEAQANARFHVVAYDFGVKANILRMLASRGCRLTVVPAQTPAVEVLALNPDGIFLSNG 243
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A ++E L + +P FGIC+GHQL+ A G
Sbjct: 244 PGDPEPCDYAIAAIREFLSRGIPTFGICLGHQLMALASG 282
>gi|153948324|ref|YP_001402409.1| carbamoyl phosphate synthase small subunit [Yersinia
pseudotuberculosis IP 31758]
gi|152959819|gb|ABS47280.1| carbamoyl-phosphate synthase, small subunit [Yersinia
pseudotuberculosis IP 31758]
Length = 391
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ E S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 122 LREKGAQNGCIIVGELSDAALALEKAKAFPGLKGMDLAKEVTTKEMYQWLQGS---WTLE 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GDLPAAKQPENLPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|55669822|pdb|1T36|B Chain B, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
gi|55669824|pdb|1T36|D Chain D, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
gi|55669826|pdb|1T36|F Chain F, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
gi|55669828|pdb|1T36|H Chain H, Crystal Structure Of E. Coli Carbamoyl Phosphate
Synthetase Small Subunit Mutant C248d Complexed With
Uridine 5'-Monophosphate
Length = 382
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPDDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|320540425|ref|ZP_08040075.1| putative carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Serratia symbiotica str. Tucson]
gi|320029356|gb|EFW11385.1| putative carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Serratia symbiotica str. Tucson]
Length = 382
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNTCDEESSSVHAQGLVIRDLPLIASNYRNEEGLCAYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S + L +R + + G+DL V+ K + W + + W
Sbjct: 122 LREKGAQNGCIIAADSPDAELALAKARGFPGLKGMDLAKQVTTKGSYRWQQGS---WRLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ ++T + V+AYD+G+K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GNLPEAQTAEALPFHVVAYDYGVKRNILRLLVDRGCRLTVVPAQTPADEVLKMSPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K+ L +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCNYAIDAIKQFLETDIPLFGICLGHQLLALASG 280
>gi|50085900|ref|YP_047410.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp. ADP1]
gi|60389579|sp|Q6F8M7.1|CARA_ACIAD RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|49531876|emb|CAG69588.1| carbamoyl-phosphate synthase, small chain [Acinetobacter sp. ADP1]
Length = 379
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNEEDTESGRIHKVWANGLIIRDLPLLHSNFRSEQSLAEYLIQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E L +R++ + G+DL + FEW E + W+
Sbjct: 125 LRDKGAQNGCILAGENITEEEALAKARAFGGLNGLDLAKECCDPNGFEWTEGS---WELG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 KGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEQVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTNLPVFGICLGHQILALASG 280
>gi|91226826|ref|ZP_01261479.1| carbamoyl-phosphate synthase small subunit [Vibrio alginolyticus
12G01]
gi|91188957|gb|EAS75241.1| carbamoyl-phosphate synthase small subunit [Vibrio alginolyticus
12G01]
Length = 392
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 174/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 18 ALLVLEDGTVFRGVSIGADGLSVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 77
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 78 TTSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 137
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 138 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 194
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 195 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 254
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 255 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 293
>gi|288940452|ref|YP_003442692.1| carbamoyl-phosphate synthase small subunit [Allochromatium vinosum
DSM 180]
gi|288895824|gb|ADC61660.1| carbamoyl-phosphate synthase, small subunit [Allochromatium vinosum
DSM 180]
Length = 381
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/281 (47%), Positives = 176/281 (62%), Gaps = 12/281 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDGS++R S GA G+ VGEVVFNTS++GYQEILTDPSY Q V +T PHIGN G
Sbjct: 5 AILVLEDGSVFRGTSIGADGSSVGEVVFNTSMSGYQEILTDPSYLRQLVTLTYPHIGNVG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES AGL++R L SN+R E+L YL N++GI D+DTR +TR LR+
Sbjct: 65 ANPEDEESGAIQAAGLIVRDLPARASNFRLTESLDAYLTRHNVVGIADIDTRRLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN--- 183
G+ G + ++ + L +R++ + G+DL S +E + W + + W +
Sbjct: 125 KGAQNGCIQAGDAIDEAAALAEARAFPGLKGMDLAQHASTQEAYPWTQGS---WTLDGGL 181
Query: 184 ----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
Y V+AYD+GIK NILR L GC + VVP+ PA+ L L+PDGV S
Sbjct: 182 PEPLKPVDGKLPYHVVAYDYGIKRNILRMLVDRGCHVTVVPAHMPAATVLALEPDGVFLS 241
Query: 240 NGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
NGPGDP YA+A ++ELL +P+FGIC+GHQLLG A G
Sbjct: 242 NGPGDPEPCDYAIAAIRELLETDIPIFGICLGHQLLGLACG 282
>gi|258545358|ref|ZP_05705592.1| carbamoyl-phosphate synthase, small subunit [Cardiobacterium
hominis ATCC 15826]
gi|258519391|gb|EEV88250.1| carbamoyl-phosphate synthase, small subunit [Cardiobacterium
hominis ATCC 15826]
Length = 375
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/277 (48%), Positives = 169/277 (61%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA L L DGS++R ++ GA G++ GE+VFNT++TGYQEILTDPSYAGQ V +T PHIGNT
Sbjct: 3 NAILALADGSVFRGRAIGADGSRCGELVFNTAMTGYQEILTDPSYAGQIVTLTYPHIGNT 62
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN D ES AGLV+R S+WR + +L +YL I+GI DVDTR ITRRLR
Sbjct: 63 GVNALDVESGALQAAGLVVRDAPATYSSWRASGSLSDYLRAHGIIGIADVDTREITRRLR 122
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ L E + + G DL S + K W ES WD
Sbjct: 123 THGAQNACLMAGEIDEVAAIAAARAHPSMSGQDLASGIGIKSAQAWTESV---WDAARDC 179
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
E+ V+AYD+GIK NILR L + GC++ +VP+ A E L L PDG+ SNGPG
Sbjct: 180 YPEQADGACHVVAYDYGIKANILRLLVASGCRVTLVPAATSAEEALALAPDGIFLSNGPG 239
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP + A+A ++E L K+PVFGIC+GHQLLG A G
Sbjct: 240 DPEPMTGAIATIREFLARKIPVFGICLGHQLLGLACG 276
>gi|419797191|ref|ZP_14322687.1| carbamoyl-phosphate synthase, small subunit [Neisseria sicca VK64]
gi|385698564|gb|EIG28918.1| carbamoyl-phosphate synthase, small subunit [Neisseria sicca VK64]
Length = 376
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 177/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G G+ GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESGSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAKEVSCTEAYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LA+ GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+G A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLIGLAIG 277
>gi|218703292|ref|YP_002410811.1| carbamoyl phosphate synthase small subunit [Escherichia coli
UMN026]
gi|293403105|ref|ZP_06647202.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
FVEC1412]
gi|417584845|ref|ZP_12235629.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_C165-02]
gi|419935362|ref|ZP_14452444.1| carbamoyl phosphate synthase small subunit [Escherichia coli 576-1]
gi|432351669|ref|ZP_19594982.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE2]
gi|432400115|ref|ZP_19642876.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE26]
gi|432429145|ref|ZP_19671612.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE181]
gi|432463887|ref|ZP_19706008.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE204]
gi|432474032|ref|ZP_19716049.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE208]
gi|432520684|ref|ZP_19757855.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE228]
gi|432540857|ref|ZP_19777738.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE235]
gi|432634480|ref|ZP_19870388.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE80]
gi|432644072|ref|ZP_19879886.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE83]
gi|432664191|ref|ZP_19899794.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE116]
gi|432773187|ref|ZP_20007489.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE54]
gi|432883615|ref|ZP_20098928.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE158]
gi|432909535|ref|ZP_20116867.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE190]
gi|433017003|ref|ZP_20205282.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE105]
gi|433051214|ref|ZP_20238469.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE122]
gi|433066142|ref|ZP_20253000.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE128]
gi|433156964|ref|ZP_20341851.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE177]
gi|433176395|ref|ZP_20360876.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE82]
gi|218430389|emb|CAR11256.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Escherichia coli UMN026]
gi|291430020|gb|EFF03034.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
FVEC1412]
gi|345343028|gb|EGW75420.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_C165-02]
gi|388404617|gb|EIL65070.1| carbamoyl phosphate synthase small subunit [Escherichia coli 576-1]
gi|430881248|gb|ELC04502.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE2]
gi|430930230|gb|ELC50731.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE26]
gi|430948892|gb|ELC68476.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE181]
gi|430983574|gb|ELD00231.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE204]
gi|431011723|gb|ELD25797.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE208]
gi|431046067|gb|ELD56186.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE228]
gi|431065359|gb|ELD74131.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE235]
gi|431165582|gb|ELE65920.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE80]
gi|431175953|gb|ELE75939.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE83]
gi|431205469|gb|ELF03956.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE116]
gi|431321697|gb|ELG09297.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE54]
gi|431420992|gb|ELH03210.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE158]
gi|431449289|gb|ELH29864.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE190]
gi|431538334|gb|ELI14320.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE105]
gi|431576825|gb|ELI49488.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE122]
gi|431593332|gb|ELI63889.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE128]
gi|431683838|gb|ELJ49465.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE177]
gi|431711771|gb|ELJ76081.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE82]
Length = 382
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAVLALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|332295570|ref|YP_004437493.1| carbamoyl-phosphate synthase small subunit [Thermodesulfobium
narugense DSM 14796]
gi|332178673|gb|AEE14362.1| carbamoyl-phosphate synthase, small subunit [Thermodesulfobium
narugense DSM 14796]
Length = 372
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 176/279 (63%), Gaps = 17/279 (6%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L+LED S + +SFGA G +GEVVFNT ++GYQEILTDPSY GQ V MT P IGN G
Sbjct: 6 AMLLLEDKSFFLGRSFGAEGEVMGEVVFNTCMSGYQEILTDPSYFGQIVTMTYPLIGNYG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + F G ++R SNWR ETL +YL NI+GI ++DTR +TR+LR
Sbjct: 66 VNNEDVESTKPFAKGFIVRDYKDRASNWRSQETLDSYLKRNNIVGIDNIDTRFLTRKLRT 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEW-------VESTKPDW 180
G+L G++ST + + ++ + G+DL+ DV+ +E + W E KP+
Sbjct: 126 RGALNGIISTVDLDPESLYEKLKVFPSMEGLDLVKDVTPRERYSWNQTDVWISERFKPEG 185
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
DF +V D+G+K NIL+ L + GC++ V + A E L +KPDGV SN
Sbjct: 186 DF----------KVAVIDYGVKWNILKILTALGCKLTVFSAFSSADEILSIKPDGVFLSN 235
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+AV YA++ +KEL KVP+FGIC+GHQL+ A G
Sbjct: 236 GPGDPAAVSYAISPIKELFDKVPIFGICLGHQLMALASG 274
>gi|241663323|ref|YP_002981683.1| carbamoyl phosphate synthase small subunit [Ralstonia pickettii
12D]
gi|240865350|gb|ACS63011.1| carbamoyl-phosphate synthase, small subunit [Ralstonia pickettii
12D]
Length = 378
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 8 AILALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+I+ L I SN+R TL +YL ++ I +DTR +TR LR+
Sbjct: 68 VNREDVEATKVHAAGLIIKDLPILASNFRKEHTLSHYLKGEKVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E Q+ ++++RS+ + G+DL VS +P+EW T+ +W
Sbjct: 128 KGAQNGCILAGEDNV-QKAIDLARSFPGLSGMDLAKVVSVTQPYEW---TQTEWALGRGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + Y V+AYDFGIK NILR LA GC++ VVP+ A++ L PDGV SNGPGD
Sbjct: 184 GKQEAPKYHVVAYDFGIKFNILRMLAERGCRVTVVPAQTSAADVLAHNPDGVFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+A KE L ++P FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATKEFLERRLPTFGICLGHQIMGLAVG 279
>gi|406897258|gb|EKD41267.1| hypothetical protein ACD_73C00786G0002 [uncultured bacterium]
Length = 371
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 177/279 (63%), Gaps = 13/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L+L DG+I++ K FGA GEVVFNTSLTGYQE+LTDPSY GQ V+MT P IGN G
Sbjct: 3 ANLILADGTIFQGKLFGAKKEVSGEVVFNTSLTGYQEVLTDPSYKGQMVVMTYPEIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ESR FL+ L++++ S SN+R E+L YL + G+YD+DTRA+ + +R
Sbjct: 63 VNLEDAESRGLFLSALIVKNYSPIVSNFRAKESLDAYLKRHKVPGLYDIDTRALVKHIRD 122
Query: 128 DGS-----LIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP--DW 180
G+ + G +S + + +L M G DL S VS + + + + +
Sbjct: 123 QGAQQALIVYGNISKKNIQKAAQLPSME------GQDLASLVSTDKLYSFKQGSPILLSQ 176
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ K ++V+AYDFGIK NILR L +GC++ VVP +PA + L KPDG+ SN
Sbjct: 177 GLIKKKNLRKKFKVVAYDFGIKKNILRLLVDHGCEVTVVPGDYPAEKVLDKKPDGIFLSN 236
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP+ YA+ VK+LLGK P+FGIC+GHQ+LG ALG
Sbjct: 237 GPGDPAVCTYAIDNVKKLLGKKPIFGICLGHQILGLALG 275
>gi|153217327|ref|ZP_01951078.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae 1587]
gi|124113656|gb|EAY32476.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae 1587]
Length = 379
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 174/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R + L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQFLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|384419196|ref|YP_005628556.1| carbamoyl-phosphate synthase small subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353462108|gb|AEQ96387.1| carbamoyl-phosphate synthase, small subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 374
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 173/273 (63%), Gaps = 2/273 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ +S GA+G VGEVVFNT++TGYQE+LTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D+E+R+ + +GL++R + SNWR L +L ++ I +DTR +TR LRQ
Sbjct: 65 FTDQDDEARKIWASGLIVRDVPRRPSNWRSQVALPEWLQAHGVVAISGIDTRKLTRLLRQ 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G+ G L + ++ L R + G+DL VS + + W E + D + + R
Sbjct: 125 KGAQNGALMAGDIDVEKALDAARRFPGLKGMDLAKVVSTESTYNWQEG-QLDLNADAFVR 183
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
Y+V+A+D+G+K NILR LA GC + VVP+ P +E L L+PDGV SNGPGDP
Sbjct: 184 AELKYKVVAFDYGVKLNILRMLAERGCDVTVVPAQTPVAEVLALQPDGVFLSNGPGDPEP 243
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+ +KEL+ KVP FGIC+GHQLL A G
Sbjct: 244 CDYAIGAIKELIAQKVPTFGICLGHQLLALAAG 276
>gi|323526830|ref|YP_004228983.1| carbamoyl-phosphate synthase small subunit [Burkholderia sp.
CCGE1001]
gi|407714273|ref|YP_006834838.1| carbamoyl-phosphate synthase small subunit [Burkholderia
phenoliruptrix BR3459a]
gi|323383832|gb|ADX55923.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp.
CCGE1001]
gi|407236457|gb|AFT86656.1| carbamoyl-phosphate synthase small subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 389
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 184/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERTLSQYLQDEGVVAIAGLDTRKLTRVLRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS KE +EW T+ +W
Sbjct: 128 KGAQNGAILAGSDDEAKA----VELARSFPGLAGMDLAKVVSTKERYEW---TQTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++N+ YRV+A+D+G+K+NILR LA GC + V+P+ A++ L L PDG+ SNG
Sbjct: 181 EGYGKQNAPKYRVVAFDYGVKYNILRMLAERGCHVTVLPAQASAADALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ KEL+ + +P FGIC+GHQ++G ALG
Sbjct: 241 PGDPEPCDYAIQATKELIERGIPTFGICLGHQIMGLALG 279
>gi|297539180|ref|YP_003674949.1| carbamoyl-phosphate synthase small subunit [Methylotenera
versatilis 301]
gi|297258527|gb|ADI30372.1| carbamoyl-phosphate synthase, small subunit [Methylotenera
versatilis 301]
Length = 385
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 176/278 (63%), Gaps = 12/278 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R S GASG VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 7 AILVLADGTVFRGTSIGASGQTVGEVVFNTSMTGYQEILTDPSYTKQIVTLTYPHIGNYG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES Q + +GL+IR L + SN+R ++L YL+ N++ I D+DTR +TR LR+
Sbjct: 67 VNLEDVESGQVYASGLIIRDLPLTYSNFRNTQSLSEYLSANNVVAIADIDTRKLTRILRE 126
Query: 128 DGSLIGVL----STEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + + E +S + G+DL VS +P+E+ E +W
Sbjct: 127 KGAQTGAVIAGEADEAKAIALAQAAISGFPGLSGMDLAKVVSCDKPYEFTEG---EWKLG 183
Query: 184 ---THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
T+ K + V+AYD+G+K NILR L S GC++ V+P+ A+E L KPDGV SN
Sbjct: 184 KGFTYAATPK-FHVVAYDYGVKRNILRMLVSRGCKVTVLPAQTSAAEALAYKPDGVFLSN 242
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQA 277
GPGDP+ YA++ +K ++ VP FGIC+GHQLL A
Sbjct: 243 GPGDPAPCDYAISAIKTIVDTGVPTFGICLGHQLLALA 280
>gi|418260745|ref|ZP_12883216.1| carA [Shigella flexneri 6603-63]
gi|397893398|gb|EJL09858.1| carA [Shigella flexneri 6603-63]
Length = 382
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTFAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|311108162|ref|YP_003981015.1| carbamoyl-phosphate synthase small chain [Achromobacter
xylosoxidans A8]
gi|310762851|gb|ADP18300.1| carbamoyl-phosphate synthase small chain [Achromobacter
xylosoxidans A8]
Length = 384
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 174/276 (63%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R S GA G V EVVFNT++TGYQEILTDPSY+GQ V +T PHIGNTG
Sbjct: 16 AILALADGTIFRGVSIGAPGHTVAEVVFNTAMTGYQEILTDPSYSGQIVTLTYPHIGNTG 75
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+++ F AGLV+R SN+R ++L YLAE+ ++ I +DTR +TR LR+
Sbjct: 76 VNAEDVEAKRVFAAGLVVRDCPARVSNFRSTQSLPEYLAEQGVVAISGIDTRKLTRILRE 135
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ + + +E++R + + G DL VS K+ EW E T W
Sbjct: 136 KGAQGACIFV--GADAERAVELARGFAGMAGQDLAKVVSLKDSAEWTEGT---WQLGKGF 190
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + + V+AYDFGIK NILR LA GC++ VVP+ A E KL PDGV SNGPGD
Sbjct: 191 SKPDQSKFHVVAYDFGIKTNILRLLADRGCRLTVVPAQTSAEEVFKLNPDGVFLSNGPGD 250
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ + L K+PVFGIC+GHQ++G ALG
Sbjct: 251 PEPCDYAIEATRAFLDKKLPVFGICLGHQIMGLALG 286
>gi|299769006|ref|YP_003731032.1| carbamoyl phosphate synthase small subunit [Acinetobacter
oleivorans DR1]
gi|298699094|gb|ADI89659.1| carbamoyl phosphate synthase small subunit [Acinetobacter
oleivorans DR1]
Length = 379
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL E N++ I D+DTR +TR
Sbjct: 65 CNAEDVESGRIHKVWANGLIIRDLPLLHSNFRAEQSLSEYLQEHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LRQ G+ G + E+ +++E + +R++ + G+DL + FEW E + W
Sbjct: 125 LRQTGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPTGFEWSEGS---WTLG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 QGFSQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAETPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|170025798|ref|YP_001722303.1| carbamoyl phosphate synthase small subunit [Yersinia
pseudotuberculosis YPIII]
gi|169752332|gb|ACA69850.1| carbamoyl-phosphate synthase, small subunit [Yersinia
pseudotuberculosis YPIII]
Length = 391
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ E S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 122 LREKGAQNGCIIVGELSDAALALEKAKAFPGLKGMDLAKEVTTKEMYQWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|298378633|ref|ZP_06988517.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
FVEC1302]
gi|300900948|ref|ZP_07119082.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
198-1]
gi|298280967|gb|EFI22468.1| carbamoyl-phosphate synthase small subunit [Escherichia coli
FVEC1302]
gi|300355575|gb|EFJ71445.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli MS
198-1]
Length = 391
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAVLALEKARAFPGLNGMDLAKEVTTAETYSWTQGS---WTLT 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 188 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|441503646|ref|ZP_20985648.1| Carbamoyl-phosphate synthase small chain [Photobacterium sp. AK15]
gi|441428722|gb|ELR66182.1| Carbamoyl-phosphate synthase small chain [Photobacterium sp. AK15]
Length = 379
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/280 (46%), Positives = 176/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGVSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTSIHAQGLVIRDLPLIASNFRNQQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + ++ + L ++ + + G+DL +V+ E ++W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKEVTTGESYQWKQGS---WTLENG 180
Query: 185 ----HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SN
Sbjct: 181 LPEPADDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATKTFLDKGLPIFGICLGHQILALASG 280
>gi|406035564|ref|ZP_11042928.1| carbamoyl phosphate synthase small subunit [Acinetobacter parvus
DSM 16617 = CIP 108168]
Length = 384
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 182/286 (63%), Gaps = 24/286 (8%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDVESGRIHKVWANGLIIRDLPLLHSNFRSEQSLSEYLEQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVES-------- 175
LR G+ G + E+ +++E + +R++ + G+DL + E FEW E
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPEGFEWTEGSWALGQGF 184
Query: 176 TKPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
T+P++ F+ V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDG
Sbjct: 185 TQPEFKFH----------VVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEKVLALNPDG 234
Query: 236 VLFSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
V SNGPGDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 235 VFLSNGPGDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|416274792|ref|ZP_11643802.1| Carbamoyl-phosphate synthase small chain [Shigella dysenteriae CDC
74-1112]
gi|320173370|gb|EFW48572.1| Carbamoyl-phosphate synthase small chain [Shigella dysenteriae CDC
74-1112]
Length = 382
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSALGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|121727501|ref|ZP_01680619.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae V52]
gi|121630169|gb|EAX62571.1| carbamoyl-phosphate synthase, small subunit [Vibrio cholerae V52]
Length = 379
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/280 (47%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTNSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + ++ + L ++ + + G+DL VS KE + W + + W
Sbjct: 124 EKGAQNGCIMAGDNLDEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A + L L P+GV SN
Sbjct: 181 LPEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPNGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|51594974|ref|YP_069165.1| carbamoyl phosphate synthase small subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108810064|ref|YP_653980.1| carbamoyl phosphate synthase small subunit [Yersinia pestis
Antiqua]
gi|108810519|ref|YP_646286.1| carbamoyl phosphate synthase small subunit [Yersinia pestis
Nepal516]
gi|145600407|ref|YP_001164483.1| carbamoyl phosphate synthase small subunit [Yersinia pestis
Pestoides F]
gi|150260482|ref|ZP_01917210.1| carbamoyl-phosphate synthase small chain [Yersinia pestis
CA88-4125]
gi|162418527|ref|YP_001605359.1| carbamoyl phosphate synthase small subunit [Yersinia pestis Angola]
gi|166211968|ref|ZP_02238003.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|186893976|ref|YP_001871088.1| carbamoyl phosphate synthase small subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218927679|ref|YP_002345554.1| carbamoyl phosphate synthase small subunit [Yersinia pestis CO92]
gi|229836936|ref|ZP_04457101.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis Pestoides A]
gi|229840368|ref|ZP_04460527.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229842448|ref|ZP_04462603.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229900707|ref|ZP_04515831.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis Nepal516]
gi|270487924|ref|ZP_06204998.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis KIM
D27]
gi|294502577|ref|YP_003566639.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
Z176003]
gi|384121011|ref|YP_005503631.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
D106004]
gi|384124889|ref|YP_005507503.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
D182038]
gi|384137531|ref|YP_005520233.1| carbamoyl phosphate synthase small subunit [Yersinia pestis A1122]
gi|384416453|ref|YP_005625815.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420544954|ref|ZP_15043134.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-01]
gi|420550268|ref|ZP_15047885.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-02]
gi|420555716|ref|ZP_15052732.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-03]
gi|420561394|ref|ZP_15057680.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-04]
gi|420566406|ref|ZP_15062200.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-05]
gi|420572068|ref|ZP_15067348.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-06]
gi|420577342|ref|ZP_15072107.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-07]
gi|420582750|ref|ZP_15077039.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-08]
gi|420587849|ref|ZP_15081641.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-09]
gi|420593172|ref|ZP_15086431.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-10]
gi|420598852|ref|ZP_15091519.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-11]
gi|420604429|ref|ZP_15096493.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-12]
gi|420609707|ref|ZP_15101287.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-13]
gi|420614972|ref|ZP_15105974.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-14]
gi|420620432|ref|ZP_15110735.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-15]
gi|420625470|ref|ZP_15115305.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-16]
gi|420630623|ref|ZP_15119982.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-19]
gi|420635803|ref|ZP_15124612.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-25]
gi|420641395|ref|ZP_15129655.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-29]
gi|420646474|ref|ZP_15134312.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-32]
gi|420652163|ref|ZP_15139414.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-34]
gi|420657612|ref|ZP_15144330.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-36]
gi|420662948|ref|ZP_15149090.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-42]
gi|420667970|ref|ZP_15153635.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-45]
gi|420673236|ref|ZP_15158425.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-46]
gi|420678739|ref|ZP_15163433.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-47]
gi|420683975|ref|ZP_15168137.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-48]
gi|420689146|ref|ZP_15172729.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-52]
gi|420694972|ref|ZP_15177823.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-53]
gi|420700238|ref|ZP_15182415.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-54]
gi|420706395|ref|ZP_15187309.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-55]
gi|420711669|ref|ZP_15192091.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-56]
gi|420717043|ref|ZP_15196847.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-58]
gi|420722683|ref|ZP_15201653.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-59]
gi|420728320|ref|ZP_15206668.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-60]
gi|420733437|ref|ZP_15211277.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-61]
gi|420738878|ref|ZP_15216189.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-63]
gi|420744095|ref|ZP_15220847.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-64]
gi|420750028|ref|ZP_15225850.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-65]
gi|420755094|ref|ZP_15230362.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-66]
gi|420761171|ref|ZP_15235208.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-71]
gi|420766339|ref|ZP_15239886.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-72]
gi|420771381|ref|ZP_15244398.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-76]
gi|420776688|ref|ZP_15249185.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-88]
gi|420782195|ref|ZP_15254014.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-89]
gi|420787629|ref|ZP_15258781.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-90]
gi|420793092|ref|ZP_15263705.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-91]
gi|420798244|ref|ZP_15268331.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-92]
gi|420803630|ref|ZP_15273179.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-93]
gi|420808801|ref|ZP_15277863.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-94]
gi|420814604|ref|ZP_15283056.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-95]
gi|420819746|ref|ZP_15287720.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-96]
gi|420824821|ref|ZP_15292259.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-98]
gi|420830601|ref|ZP_15297477.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-99]
gi|420835421|ref|ZP_15301819.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-100]
gi|420840586|ref|ZP_15306503.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-101]
gi|420846174|ref|ZP_15311558.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-102]
gi|420851504|ref|ZP_15316313.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-103]
gi|420857092|ref|ZP_15321019.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-113]
gi|421761912|ref|ZP_16198712.1| carbamoyl phosphate synthase small subunit [Yersinia pestis INS]
gi|21759036|sp|Q8ZIL5.1|CARA_YERPE RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|60389540|sp|Q66ER8.1|CARA_YERPS RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|51588256|emb|CAH19863.1| carbamoyl-phosphate synthetase, glutamine amidotransferase small
subunit [Yersinia pseudotuberculosis IP 32953]
gi|108774167|gb|ABG16686.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
Nepal516]
gi|108781977|gb|ABG16035.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
Antiqua]
gi|115346290|emb|CAL19161.1| carbamoyl-phosphate synthase small chain [Yersinia pestis CO92]
gi|145212103|gb|ABP41510.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
Pestoides F]
gi|149289890|gb|EDM39967.1| carbamoyl-phosphate synthase small chain [Yersinia pestis
CA88-4125]
gi|162351342|gb|ABX85290.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis
Angola]
gi|166206714|gb|EDR51194.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|186697002|gb|ACC87631.1| carbamoyl-phosphate synthase, small subunit [Yersinia
pseudotuberculosis PB1/+]
gi|229682046|gb|EEO78138.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis Nepal516]
gi|229690758|gb|EEO82812.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229696734|gb|EEO86781.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229705879|gb|EEO91888.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis Pestoides A]
gi|262360607|gb|ACY57328.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
D106004]
gi|262364553|gb|ACY61110.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
D182038]
gi|270336428|gb|EFA47205.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis KIM
D27]
gi|294353036|gb|ADE63377.1| carbamoyl-phosphate synthase small subunit [Yersinia pestis
Z176003]
gi|320016957|gb|ADW00529.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342852660|gb|AEL71213.1| carbamoyl phosphate synthase small subunit [Yersinia pestis A1122]
gi|391432262|gb|EIQ93723.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-01]
gi|391433410|gb|EIQ94746.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-02]
gi|391435866|gb|EIQ96876.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-03]
gi|391448354|gb|EIR08175.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-04]
gi|391449001|gb|EIR08759.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-05]
gi|391451606|gb|EIR11083.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-06]
gi|391464385|gb|EIR22674.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-07]
gi|391466012|gb|EIR24130.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-08]
gi|391468128|gb|EIR26030.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-09]
gi|391481449|gb|EIR37979.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-10]
gi|391482260|gb|EIR38717.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-12]
gi|391482412|gb|EIR38859.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-11]
gi|391496572|gb|EIR51499.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-13]
gi|391497224|gb|EIR52099.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-15]
gi|391500940|gb|EIR55390.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-14]
gi|391512295|gb|EIR65619.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-16]
gi|391513942|gb|EIR67101.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-19]
gi|391515854|gb|EIR68801.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-25]
gi|391527788|gb|EIR79668.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-29]
gi|391530641|gb|EIR82202.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-34]
gi|391532050|gb|EIR83487.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-32]
gi|391544886|gb|EIR95042.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-36]
gi|391546492|gb|EIR96475.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-42]
gi|391547310|gb|EIR97215.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-45]
gi|391561095|gb|EIS09655.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-46]
gi|391562186|gb|EIS10618.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-47]
gi|391564276|gb|EIS12495.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-48]
gi|391576393|gb|EIS22955.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-52]
gi|391577184|gb|EIS23645.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-53]
gi|391588554|gb|EIS33564.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-55]
gi|391591354|gb|EIS35934.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-54]
gi|391592398|gb|EIS36825.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-56]
gi|391605558|gb|EIS48424.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-60]
gi|391606998|gb|EIS49647.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-58]
gi|391607788|gb|EIS50343.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-59]
gi|391619880|gb|EIS61093.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-61]
gi|391620889|gb|EIS62003.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-63]
gi|391629150|gb|EIS69117.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-64]
gi|391631398|gb|EIS71036.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-65]
gi|391642696|gb|EIS80939.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-71]
gi|391645504|gb|EIS83377.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-72]
gi|391648101|gb|EIS85657.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-66]
gi|391655196|gb|EIS91961.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-76]
gi|391662051|gb|EIS98029.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-88]
gi|391666846|gb|EIT02240.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-89]
gi|391668717|gb|EIT03923.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-90]
gi|391672749|gb|EIT07530.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-91]
gi|391686291|gb|EIT19730.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-93]
gi|391687913|gb|EIT21181.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-92]
gi|391689150|gb|EIT22307.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis PY-94]
gi|391700443|gb|EIT32537.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-95]
gi|391703719|gb|EIT35445.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-96]
gi|391704556|gb|EIT36206.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-98]
gi|391715002|gb|EIT45583.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-99]
gi|391720065|gb|EIT50113.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-100]
gi|391720572|gb|EIT50577.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-101]
gi|391731238|gb|EIT59965.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-102]
gi|391733736|gb|EIT62077.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-103]
gi|391737214|gb|EIT65119.1| carbamoyl-phosphate synthase small chain [Yersinia pestis PY-113]
gi|411178234|gb|EKS48246.1| carbamoyl phosphate synthase small subunit [Yersinia pestis INS]
Length = 391
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ E S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 122 LREKGAQNGCIIVGELSDAALALEKAKAFPGLKGMDLAKEVTTKEMYQWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|456063112|ref|YP_007502082.1| carbamoyl-phosphate synthase, small subunit [beta proteobacterium
CB]
gi|455440409|gb|AGG33347.1| carbamoyl-phosphate synthase, small subunit [beta proteobacterium
CB]
Length = 400
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 181/288 (62%), Gaps = 19/288 (6%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++ S GA G GEVVFNT+LTGYQEI+TDPSY+ Q V +T PHIGN G
Sbjct: 11 AVLALADGTVFPGLSIGAPGETTGEVVFNTALTGYQEIITDPSYSRQIVTLTYPHIGNVG 70
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN D ES Q AGLV++ LS SN+R ++L YL + ++GI +DTR +TR LR
Sbjct: 71 VNSQDAESDQIHAAGLVVKDLSKRVSNFRSEDSLDGYLTKAGVVGISGIDTRKLTRILRD 130
Query: 128 DGSLIGVLSTEESKSD-----QELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD 181
G+ G + + D ++ LE+++++ + G+DL V+ K P++W E+ +WD
Sbjct: 131 KGAQSGAIVAGKMGDDVQALGKKALELAKAFPGMAGLDLAKVVTTKTPYQWREA---EWD 187
Query: 182 ---------FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLK 232
+ T + + +V+AYDFG+K NILR L GC++ +VP+ A+E L +
Sbjct: 188 LHGPDGKPAYRTLDASKPIKKVVAYDFGVKRNILRMLTERGCELTIVPAQTSAAEVLAMN 247
Query: 233 PDGVLFSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PDGV FSNGPGDP YA+A KE++ K VP FGIC+GHQ++G A G
Sbjct: 248 PDGVFFSNGPGDPGPCDYAIAAAKEIIEKGVPTFGICLGHQIMGLAAG 295
>gi|332160250|ref|YP_004296827.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|325664480|gb|ADZ41124.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330863041|emb|CBX73173.1| carbamoyl-phosphate synthase small chain [Yersinia enterocolitica
W22703]
Length = 387
Score = 251 bits (640), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSKYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ + S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 122 LREKGAQNGCIIVGDLSDAALALEKAKAFPGLKGMDLAKEVTTKEVYQWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ +VP+ PA + LKL PDG+
Sbjct: 179 GDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTIVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|404373349|ref|ZP_10978612.1| carbamoyl-phosphate synthase small chain [Escherichia sp. 1_1_43]
gi|404293023|gb|EEH72556.2| carbamoyl-phosphate synthase small chain [Escherichia sp. 1_1_43]
Length = 382
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKCHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|388567378|ref|ZP_10153812.1| Carbamoyl-phosphate synthase small chain [Hydrogenophaga sp. PBC]
gi|388265400|gb|EIK90956.1| Carbamoyl-phosphate synthase small chain [Hydrogenophaga sp. PBC]
Length = 451
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/285 (45%), Positives = 177/285 (62%), Gaps = 17/285 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG+++ S GA+G GEVVFNT++TGYQEILTDPSY Q V +T PHIGNT
Sbjct: 70 KALLALADGTVFEGISIGATGQTSGEVVFNTAITGYQEILTDPSYCRQIVTLTYPHIGNT 129
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I++L + SN+R TL +YL N + I D+DTRA+TRRLR
Sbjct: 130 GVNAEDVEATRIHAAGLIIKNLPLLASNFRSEATLSDYLRRENTVAIADLDTRALTRRLR 189
Query: 127 QDGSLIGVLSTEESKSDQELLEMSR---------SWDIVGIDLISDVSGKEPFEWVESTK 177
G+ G + E Q + + R + ++ G DL VS +P+ W ++
Sbjct: 190 THGAQNGCILALE--PGQAITDAHRKVAIDAAKAAPNMAGQDLAKVVSVDKPYAWSQT-- 245
Query: 178 PDWDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
+W E + V+AYDFG+KHNILR LAS GC++ VVP+ PA+E KL+PDG
Sbjct: 246 -EWTLGEGYGEIGEAVFHVVAYDFGVKHNILRMLASRGCRVTVVPAQTPAAEVFKLQPDG 304
Query: 236 VLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
V SNGPGDP YA+A +E++ +P FGIC+GHQ++ A G
Sbjct: 305 VFLSNGPGDPEPCDYAIAAAREIIDAGLPTFGICLGHQIMALASG 349
>gi|418240109|ref|ZP_12866652.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|351780612|gb|EHB22682.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
Length = 387
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSKYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ + S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 122 LREKGAQNGCIIVGDLSDAALALEKAKAFPGLKGMDLAKEVTTKEVYQWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ +VP+ PA + LKL PDG+
Sbjct: 179 GDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTIVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|398797097|ref|ZP_10556422.1| carbamoyl-phosphate synthase, small subunit [Pantoea sp. GM01]
gi|398103772|gb|EJL93935.1| carbamoyl-phosphate synthase, small subunit [Pantoea sp. GM01]
Length = 382
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N GVN DEES Q GLVIR L + TSN+R E+L YL NI+GI D+DTR +TR
Sbjct: 62 NVGVNAADEESSQIHAQGLVIRDLPLITSNFRSEESLSAYLQRNNIVGIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ L+ ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQSGCIIAGDNPDAALALQKAQAFPGLKGMDLAKEVTTAETYAWQQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
K+ + V+AYD+G K NILR L GC++ VVP+ PA E L L PDG+
Sbjct: 179 GDLPEQKSAEALPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPADEVLALNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ ++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAINAIQAFLNTDIPVFGICLGHQLLALASG 280
>gi|433128322|ref|ZP_20313811.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE163]
gi|431652634|gb|ELJ19782.1| carbamoyl-phosphate synthase small chain [Escherichia coli KTE163]
Length = 382
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEIL+DPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILSDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|123440985|ref|YP_001004974.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|420257161|ref|ZP_14759927.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|122087946|emb|CAL10734.1| carbamoyl-phosphate synthase small chain [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|404515306|gb|EKA29075.1| carbamoyl phosphate synthase small subunit [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 387
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ + S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 122 LREKGAQNGCIIVGDLSDAALALEKAKAFPGLKGMDLAKEVTTKEVYQWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ +VP+ PA + LKL PDG+
Sbjct: 179 GDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTIVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|22127567|ref|NP_670990.1| carbamoyl phosphate synthase small subunit [Yersinia pestis KIM10+]
gi|45443430|ref|NP_994969.1| carbamoyl phosphate synthase small subunit [Yersinia pestis biovar
Microtus str. 91001]
gi|165927288|ref|ZP_02223120.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937751|ref|ZP_02226312.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008996|ref|ZP_02229894.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|167401539|ref|ZP_02307033.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167421970|ref|ZP_02313723.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426009|ref|ZP_02317762.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|21960672|gb|AAM87241.1|AE013972_8 carbamoyl-phosphate synthetase, glutamine (small) subunit [Yersinia
pestis KIM10+]
gi|45438299|gb|AAS63846.1| carbamoyl-phosphate synthase small chain [Yersinia pestis biovar
Microtus str. 91001]
gi|165914163|gb|EDR32779.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|165920750|gb|EDR37998.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992335|gb|EDR44636.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166960107|gb|EDR56128.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167048921|gb|EDR60329.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054932|gb|EDR64732.1| carbamoyl-phosphate synthase, small subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
Length = 400
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G ++ E S + L + + G+DL +V+ KE ++W++ + W
Sbjct: 131 LREKGAQNGCIIVGELSDAALALEKAKAFPGLKGMDLAKEVTTKEMYQWLQGS---WTLE 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 188 GDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASG 289
>gi|212555543|gb|ACJ27997.1| Carbamoyl-phosphate synthase, small subunit [Shewanella
piezotolerans WP3]
Length = 381
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 172/279 (61%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ + GA G VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFSGTAIGAEGMSVGEVVFNTSMTGYQEILTDPSYARQMVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R ++L YL N++GI D+DTR +TR LR
Sbjct: 64 GTNEEDTESSSVHACGLIIRDLPLIASNFRNQQSLSEYLEANNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
+ G+ G + + + L + G+DL +V+ + ++W + W
Sbjct: 124 EKGAQAGCILVGDLDEAKALAAAKAFPGLKGMDLAKEVTTTDAYQWRSGS---WRLVGGL 180
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ Y+V+AYD+G+K NILR L GC + VVP+ PASE L + PDGV SNG
Sbjct: 181 PSDKAEAELKYKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPASEVLAMNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+A ++E+L +PVFGIC+GHQLL A G
Sbjct: 241 PGDPEPCDYAIAAIQEILKTDIPVFGICLGHQLLALASG 279
>gi|352094237|ref|ZP_08955408.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. WH
8016]
gi|351680577|gb|EHA63709.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp. WH
8016]
Length = 379
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 178/278 (64%), Gaps = 2/278 (0%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N ARLVL+DG++ + G G+ +GEVVFNT +TGYQE+LTDPSY+GQ + T P I
Sbjct: 5 NPFTARLVLQDGTVLEGFACGQRGSVIGEVVFNTGMTGYQEVLTDPSYSGQLITFTYPEI 64
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GNTGVN DD+E+ Q GL++R L+ SNWR ++L ++ + ++GI+ VDTRA+ R
Sbjct: 65 GNTGVNSDDQEADQPHARGLIVRQLAPQASNWRSQQSLPEWMEQNGVIGIHGVDTRALVR 124
Query: 124 RLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G + GV+S++ + + L E+ ++ + G++L VS ++W + +D
Sbjct: 125 HLRELGPMNGVISSDGRPALELLEELKQAPSMEGLNLADQVSTPTAYKWTKPCGVPFDQR 184
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
R + YRV+A DFGIK IL RL S+GC + V+P L +P+GV SNGPG
Sbjct: 185 FQTRPERPYRVVAIDFGIKRAILERLVSHGCDLTVLPGNTDIKTVLSYEPEGVFLSNGPG 244
Query: 244 DPSAVPYAVAIVKELLG--KVPVFGICMGHQLLGQALG 279
DP+AV + + + LL ++P+FGIC+GHQ+LG ALG
Sbjct: 245 DPAAVQSGITLARNLLEHRQLPMFGICLGHQILGLALG 282
>gi|149177234|ref|ZP_01855840.1| carbamoyl-phosphate synthase small subunit [Planctomyces maris DSM
8797]
gi|148843948|gb|EDL58305.1| carbamoyl-phosphate synthase small subunit [Planctomyces maris DSM
8797]
Length = 392
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 175/287 (60%), Gaps = 15/287 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A+L L DGS++ +FGA G GEVVFNTS+TGYQEILTDPSY GQ V MT P IGN G
Sbjct: 5 AKLALADGSVFTGTAFGADGEVHGEVVFNTSMTGYQEILTDPSYCGQIVTMTYPQIGNYG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ +D ES L G ++R L SN+R +TL YL ++G+ +DTRA+ R++R
Sbjct: 65 IVPEDVESGGISLQGFIVRELCEIPSNYRSTQTLDEYLKAAGVIGLQGIDTRALVRKIRT 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP-DWDFNTHE 186
G++ GVLST + + + + S +VG DL+S V + EW E+ P +TH
Sbjct: 125 SGAMTGVLSTTDLDDESLVKKAQSSPQLVGQDLVSKVIPEAASEWNEALHPLAHSSSTHS 184
Query: 187 RNSK--------------TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLK 232
+ K Y ++A D+G+K NI R L GC++ V+P A+E ++L
Sbjct: 185 FSGKNIATLSEEDLAAESAYHIVAIDYGMKWNIPRHLKQLGCKVTVLPGNCTAAEVMELN 244
Query: 233 PDGVLFSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PDGV SNGPGDP + YA+ ++ELLG+VP+FGIC+GHQLLG A G
Sbjct: 245 PDGVFLSNGPGDPEPLTYAIDTIRELLGQVPIFGICLGHQLLGLACG 291
>gi|27364028|ref|NP_759556.1| carbamoyl phosphate synthase small subunit [Vibrio vulnificus
CMCP6]
gi|31340015|sp|Q8DEM1.1|CARA_VIBVU RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|27360145|gb|AAO09083.1| Carbamoyl-phosphate synthase small chain [Vibrio vulnificus CMCP6]
Length = 379
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTTSEDEESSSIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF--- 182
+ G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 124 EKGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGG 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + Y V+AYDFG K NILR L GC++ VVP+ A + L L PDGV SN
Sbjct: 181 LPEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEDVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP+ YA+ K L +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPAPCTYAIEATKVFLENGLPVFGICLGHQILALASG 280
>gi|134295353|ref|YP_001119088.1| carbamoyl phosphate synthase small subunit [Burkholderia
vietnamiensis G4]
gi|387901926|ref|YP_006332265.1| carbamoyl-phosphate synthase small chain [Burkholderia sp. KJ006]
gi|134138510|gb|ABO54253.1| carbamoyl-phosphate synthase small subunit [Burkholderia
vietnamiensis G4]
gi|387576818|gb|AFJ85534.1| Carbamoyl-phosphate synthase small chain [Burkholderia sp. KJ006]
Length = 381
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 184/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAEGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPTLASNFRKERTLGDYLRDEGVVAIAGIDTRKLTRILRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS +PFEW ++ +W
Sbjct: 128 KGAQNGCILAGSDDEAKA----VELARSFPGLAGMDLAKVVSTAKPFEWKQT---EWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + + YRV+AYDFG+K+NILR LA GC + V+P+ A++ L L PDG+ SNG
Sbjct: 181 SGYGMQQAPKYRVVAYDFGVKYNILRMLAERGCHVTVLPAQASAADALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A +E + + VP FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAAAREFIERGVPTFGICLGHQIMGLAVG 279
>gi|170695453|ref|ZP_02886598.1| carbamoyl-phosphate synthase, small subunit [Burkholderia graminis
C4D1M]
gi|170139644|gb|EDT07827.1| carbamoyl-phosphate synthase, small subunit [Burkholderia graminis
C4D1M]
Length = 384
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 184/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERTLSQYLQDEGVVAIAGLDTRKLTRVLRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS KE +EW T+ +W
Sbjct: 128 KGAQNGAILAGSDDEAKA----IELARSFPGLSGMDLAKVVSTKETYEW---TQTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++N+ YRV+A+D+G+K+NILR LA GC + V+P+ A++ L L PDG+ SNG
Sbjct: 181 NGYGKQNAPKYRVVAFDYGVKYNILRMLAERGCHVTVLPAQATAADALALNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ KEL+ + +P FGIC+GHQ++G ALG
Sbjct: 241 PGDPEPCDYAIKATKELIERGIPTFGICLGHQIMGLALG 279
>gi|112791456|gb|ABI21998.1| carbamoylphosphate synthetase small subunit, partial [Erwinia
pyrifoliae DSM 12163]
Length = 327
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 169/268 (63%), Gaps = 10/268 (3%)
Query: 19 RAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESRQC 78
++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N DEES Q
Sbjct: 1 HGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNSGDEESTQV 60
Query: 79 FLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTE 138
AGLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G+ G +
Sbjct: 61 HAAGLVIRDLPLIASNYRNEEGLSDYLTRHNIVAIADIDTRKLTRLLREKGAQNGCIIAG 120
Query: 139 ESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNSKT-----Y 192
E+ LE +R++ + G+DL +V+ + + W++ + W T +K Y
Sbjct: 121 EAPDAAFALEKARAFPGLKGMDLAKEVTTPDAYTWLQGS---WTLETELPTAKAEGELPY 177
Query: 193 RVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAV 252
V+AYD+G+K NILR L GC++ VVP+ PA E LKL PDGV SNGPGDP YA+
Sbjct: 178 HVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGVFLSNGPGDPEPCDYAM 237
Query: 253 AIVKELL-GKVPVFGICMGHQLLGQALG 279
+ LL +P+FGIC+GHQLL A G
Sbjct: 238 TAINRLLETNIPLFGICLGHQLLALASG 265
>gi|333913562|ref|YP_004487294.1| carbamoyl-phosphate synthase small subunit [Delftia sp. Cs1-4]
gi|333743762|gb|AEF88939.1| carbamoyl-phosphate synthase, small subunit [Delftia sp. Cs1-4]
Length = 390
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/284 (46%), Positives = 184/284 (64%), Gaps = 15/284 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++ S GA GT VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN
Sbjct: 11 SAILALADGTVFVGNSIGAQGTTVGEVVFNTAITGYQEILTDPSYCQQIVTLTYPHIGNY 70
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I++L + SN+R +ETL +YL + I ++DTR +TR LR
Sbjct: 71 GVNAEDVEAGKVHAAGLIIKNLPLLASNFRKSETLPDYLTRSGTVAIANIDTRKLTRLLR 130
Query: 127 ----QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPD 179
Q+G+++G+ + EE ++ D+ L + + G+DL VS + +EW E+ +
Sbjct: 131 DKGAQNGAIVGLAAGEEVTQARIDEALAAAKAAPSMKGLDLAQVVSVAQQYEWTET---E 187
Query: 180 WDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
W ++ + + V+AYDFG+K NILR LA GC++ VVP+ PA + L L PDGV
Sbjct: 188 WKLGEGYGQQQAPRFHVVAYDFGVKFNILRMLAERGCKLTVVPAKTPAKDVLALNPDGVF 247
Query: 238 FSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A KEL+ GK PVFGIC+GHQ++ A G
Sbjct: 248 LSNGPGDPEPCDYAIAATKELVESGK-PVFGICLGHQIMALAAG 290
>gi|398795249|ref|ZP_10555164.1| carbamoyl-phosphate synthase, small subunit [Pantoea sp. YR343]
gi|398207080|gb|EJM93836.1| carbamoyl-phosphate synthase, small subunit [Pantoea sp. YR343]
Length = 382
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 180/279 (64%), Gaps = 4/279 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N GVN DEES Q GLVIR L + TSN+R E+L YL NI+GI D+DTR +TR
Sbjct: 62 NVGVNAADEESSQIHAQGLVIRDLPLITSNFRSEESLSAYLQRNNIVGIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVEST-KPDWDF 182
LR+ G+ G + ++ L+ ++++ + G+DL +V+ E + W + + + D
Sbjct: 122 LREKGAQSGCIIAGDNPDAALALQKAQAFPGLKGMDLAKEVTTAETYAWQQGSWTLEGDL 181
Query: 183 NTHERNSK-TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++ + + V+AYD+G K NILR L GC++ VVP+ PA E L L PDG+ SNG
Sbjct: 182 PEQKKAEELPFHVVAYDYGAKRNILRMLVDRGCRLTVVPAKTPAEEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
PGDP YA+ ++ L +PVFGIC+GHQLL A G
Sbjct: 242 PGDPEPCDYAINAIQAFLKTDIPVFGICLGHQLLALASG 280
>gi|304311952|ref|YP_003811550.1| carbamoyl-phosphate synthase small subunit [gamma proteobacterium
HdN1]
gi|301797685|emb|CBL45907.1| Carbamoyl-phosphate synthase small chain [gamma proteobacterium
HdN1]
Length = 379
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 180/279 (64%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L LEDG+++R S GA G GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNT
Sbjct: 4 SALLALEDGTVFRGVSIGAEGKSSGEVVFNTAMTGYQEILTDPSYAQQMVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +DEES + + GL+IR S+ SN+R +L +YL ++ ++GI D+DTR +TR LR
Sbjct: 64 GINDEDEESSKIWATGLIIRDNSLIASNFRSQMSLSDYLKQKGVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + S +E + +R++ + G+DL VS EP+ W T+ W
Sbjct: 124 EKGAQNGCIIAGGSPDAEEAIAAARAFPGLAGMDLAKVVSTAEPYTW---TQGGWVLGKG 180
Query: 186 ERN----SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
RN Y V+AYDFG+K NILR L GC++ VVP+ PA + L + PDG+ SNG
Sbjct: 181 FRNWAPGELKYHVVAYDFGVKRNILRMLVDRGCRLTVVPAQTPAEKVLAMNPDGIFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP+ YA+ +++ L +P+FGIC+GHQLL A G
Sbjct: 241 PGDPAPCDYAIEAIRKFLATGIPIFGICLGHQLLALAAG 279
>gi|254526061|ref|ZP_05138113.1| carbamoyl-phosphate synthase, small subunit [Prochlorococcus
marinus str. MIT 9202]
gi|221537485|gb|EEE39938.1| carbamoyl-phosphate synthase, small subunit [Prochlorococcus
marinus str. MIT 9202]
Length = 379
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G ++ FGASGT +GE+VFNT +TGYQE++TDPSY GQ + T P IGNT
Sbjct: 8 NAKLVLSNGIVFPGFYFGASGTAIGEIVFNTGMTGYQEVITDPSYYGQILTFTYPEIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+NF+D ES + + G+++R+ S SNWR ++ +L ++NI+G+Y +DTRA+ + LR
Sbjct: 68 GINFEDSES-EINVRGIIVRNFSSNNSNWRSKKSFNQWLIDKNIVGLYGIDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
+GS+ GV+++E+ + L + + G++L VS K+ + W T+ +D
Sbjct: 127 SNGSMNGVITSEDKNVESCLKIIHDIPKMEGLNLSKVVSTKKQYLWKSHTRTVFDLRKRF 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+SK +++A DFGIK++IL RL S+GC+++V+ S + L KPDG+ FSNGPGDP
Sbjct: 187 ADSSKKLKIVAIDFGIKNSILNRLVSHGCEVLVLSSRSTLKDVLYNKPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S+V + + K L+ G++P+FGIC+GHQ+ G ALG
Sbjct: 247 SSVSEGIDLAKALIEYGEIPMFGICLGHQIFGLALG 282
>gi|312970125|ref|ZP_07784307.1| carbamoyl-phosphate synthase small chain [Escherichia coli 1827-70]
gi|310337623|gb|EFQ02734.1| carbamoyl-phosphate synthase small chain [Escherichia coli 1827-70]
Length = 382
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ Y + AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYVITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|295677144|ref|YP_003605668.1| carbamoyl-phosphate synthase small subunit [Burkholderia sp.
CCGE1002]
gi|295436987|gb|ADG16157.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp.
CCGE1002]
Length = 384
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 183/279 (65%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERTLPQYLQDEGVVAIAGIDTRKLTRLLRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ +E++RS+ + G+DL VS ++ +EW TK +W
Sbjct: 128 KGAQNGAILAGSDDEAKA----IELARSFPGLAGMDLAKVVSTQQTYEW---TKTEWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
T E+ + YRV+A+D+G+K NILR LA GC + V+P+ A++ L L PDGV SNG
Sbjct: 181 TGYGEQKAPKYRVVAFDYGVKQNILRMLAERGCHVTVLPAQASAADALALNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A +E + + +P FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAATREFIERGIPTFGICLGHQIMGLAVG 279
>gi|167625074|ref|YP_001675368.1| carbamoyl phosphate synthase small subunit [Shewanella halifaxensis
HAW-EB4]
gi|167355096|gb|ABZ77709.1| carbamoyl-phosphate synthase, small subunit [Shewanella
halifaxensis HAW-EB4]
Length = 381
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/280 (46%), Positives = 175/280 (62%), Gaps = 11/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+I+ + GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTIFSGTAIGAEGMSVGEVVFNTSMTGYQEILTDPSYSRQMVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D ES GL+IR L + SN+R ++L +YL N++GI D+DTR +TR LR
Sbjct: 64 GTNEEDTESDSVHACGLIIRDLPLIASNFRNQQSLSDYLIANNVVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
+ G+ G + + + L + G+DL +V+ E + W + W
Sbjct: 124 EKGAQAGCIMVGDLDEAKALAAAKAFPGLKGMDLAKEVTTNETYSWRSGS---WRLVGGL 180
Query: 183 --NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+T E K Y+V+AYD+G+K NILR L GC + VVP+ PA+E L + PDGV SN
Sbjct: 181 PSDTPEAELK-YKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPAAEVLAMNPDGVFLSN 239
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA+ ++E+L ++PVFGIC+GHQLL A G
Sbjct: 240 GPGDPEPCDYAITAIQEILKTEIPVFGICLGHQLLALASG 279
>gi|330816261|ref|YP_004359966.1| carbamoyl phosphate synthase small subunit [Burkholderia gladioli
BSR3]
gi|327368654|gb|AEA60010.1| carbamoyl phosphate synthase small subunit [Burkholderia gladioli
BSR3]
Length = 381
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 186/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 68 VNREDVEATKVHAAGLIIRDLPVLASNFRMDRTLGDYLRDEGVVAIAGIDTRKLTRVLRD 127
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + S +E+K+ + ++RS+ + G+DL VS +PF W +S +W
Sbjct: 128 KGAQNGCILAGSDDEAKA----VALARSFPGLAGMDLAKVVSTDKPFAWKQS---EWRLG 180
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ E+++ ++V+AYDFG+K+NILR LA GC + V+P+ A+E L L PDGV SNG
Sbjct: 181 SGYGEQSAPRFKVVAYDFGVKYNILRMLAERGCDVTVLPAQASAAEALALNPDGVFLSNG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+A KE + + VP FGIC+GHQ++G A+G
Sbjct: 241 PGDPEPCDYAIAAAKEFIERGVPTFGICLGHQIMGLAVG 279
>gi|261346437|ref|ZP_05974081.1| carbamoyl-phosphate synthase, small subunit [Providencia
rustigianii DSM 4541]
gi|282565420|gb|EFB70955.1| carbamoyl-phosphate synthase, small subunit [Providencia
rustigianii DSM 4541]
Length = 396
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 128/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G +GEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 11 IKSAILVLEDGTQFHGRAIGAEGAAIGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DDEES + GL+IR L + SN+R E L YL N++ I D+DTR +TR
Sbjct: 71 NVGTNADDEESPKVHAQGLIIRDLPLIYSNFRGQEGLSEYLKRHNVVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R + + G+DL +V KE + W T+ W+ +
Sbjct: 131 LREKGAQNGCIIAGDNPDVALALEKARGFTGLNGLDLAKEVCTKEIYSW---TQRSWNLD 187
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + V+AYDFG K NILR L GC++ VVP+T PA L + PDG+
Sbjct: 188 EGQPAATKADELPLHVVAYDFGAKRNILRMLVDRGCRLTVVPATTPAETVLAMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ ++E L ++PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAINAIQEFLKTEIPVFGICLGHQLLALASG 289
>gi|221066102|ref|ZP_03542207.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
KF-1]
gi|220711125|gb|EED66493.1| carbamoyl-phosphate synthase, small subunit [Comamonas testosteroni
KF-1]
Length = 390
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 181/286 (63%), Gaps = 13/286 (4%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N +A L L DG+++ S GA GT VGEVVFNTSLTGYQEILTDPSY Q V +T PHI
Sbjct: 8 NFPSAILALADGTVFIGNSIGAQGTTVGEVVFNTSLTGYQEILTDPSYCQQIVTLTYPHI 67
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN GVN +D E+ + AGL+I++L + SN+R +TL YL E + I ++DTR +TR
Sbjct: 68 GNYGVNPEDVEADKIHAAGLIIKNLPLLASNFRSTQTLSEYLTEGKTVAIANIDTRKLTR 127
Query: 124 RLR----QDGSLIGVLSTEE---SKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST 176
LR Q+G+++G+ + EE +K D+ + + + G+DL V+ + + W E+
Sbjct: 128 LLRDHGAQNGAIVGLAAGEEVTQAKIDEAIAAAKAAPSMKGLDLAKVVTTDKSYPWAET- 186
Query: 177 KPDWDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPD 234
+W + + ++V+AYDFG+K NILR LA GC + VVP+ PA + L L PD
Sbjct: 187 --EWKLGEGYGQLEAPRFKVVAYDFGVKKNILRMLAERGCDVTVVPAQTPAKDVLALNPD 244
Query: 235 GVLFSNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GV SNGPGDP YA+A +E++ K P+FGIC+GHQ++ A G
Sbjct: 245 GVFLSNGPGDPEPCDYAIAAAQEIMAAKKPLFGICLGHQIMALASG 290
>gi|392419886|ref|YP_006456490.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
CCUG 29243]
gi|390982074|gb|AFM32067.1| carbamoyl phosphate synthase small subunit [Pseudomonas stutzeri
CCUG 29243]
Length = 382
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 180/276 (65%), Gaps = 4/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DGSI+ +S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PH+GNTG
Sbjct: 9 AILALADGSIFCGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTG 68
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + AGLVIR L + +SNWR + L +YL + I +DTR +TR LR+
Sbjct: 69 TTPEDAESWKVWAAGLVIRDLPLISSNWRDKQPLPDYLKANGTVAIAGIDTRRLTRILRE 128
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + ++++ LE++RS+ + G+DL +VS KE +EW S D E
Sbjct: 129 KGAQNGCILAGSDATEEKALELARSFPGLKGMDLAKEVSVKERYEWRSSVWCLKDDGHAE 188
Query: 187 --RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ Y V+A+D+G+K+NILR L + GC++ V+P+ PASE L L PDG+ +NGPGD
Sbjct: 189 IPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANGPGD 248
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ ++++L +PVFGIC+GHQLL A G
Sbjct: 249 PEPCDYAIKAIQQVLETDIPVFGICLGHQLLALASG 284
>gi|33240195|ref|NP_875137.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33237722|gb|AAP99789.1| Carbamoylphosphate synthase small subunit [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 381
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 178/276 (64%), Gaps = 3/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA LVL DG+ K+FG GT GE+VFNT +TGYQE+LTDPSY GQ + T P +GNT
Sbjct: 9 NAILVLSDGTFIEGKAFGFRGTVSGEIVFNTGITGYQEVLTDPSYFGQLITFTFPELGNT 68
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D+ES G++ R +S SNWR +T +L + ++GI DVDTRA+ R LR
Sbjct: 69 GVNPEDQESDSPSAKGVIARQVSCYASNWRSTKTFEQWLKDEKVVGICDVDTRALVRHLR 128
Query: 127 QDGSLIGVLSTEESKSDQELLEMSR-SWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G++ ++S+E + S LL R + + G++L +V+ K+P++W D+D
Sbjct: 129 SSGTMNAIISSENNASPSSLLNTIRQAPQMKGLNLTGEVTTKKPYKWNSLASVDFDERVV 188
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + V+A DFGIK +IL RL ++GC++ V+P+ SE + P+GV FSNGPGDP
Sbjct: 189 NQAMSPFNVVAIDFGIKRSILNRLVAHGCEVNVLPANTSFSEVMSFNPEGVFFSNGPGDP 248
Query: 246 SAVPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
S+V +++ K L+ + VP+FGIC+GHQ+LG ALG
Sbjct: 249 SSVKEGMSLAKRLIEEVDVPMFGICLGHQILGLALG 284
>gi|188991523|ref|YP_001903533.1| carbamoyl phosphate synthase small subunit [Xanthomonas campestris
pv. campestris str. B100]
gi|167733283|emb|CAP51482.1| Carbamoyl-phosphate synthase (glutamine-hydrolyzing) [Xanthomonas
campestris pv. campestris]
Length = 428
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 178/280 (63%), Gaps = 2/280 (0%)
Query: 1 RPWNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTN 60
RP A LVLEDG+++ +S GA+ VGEVVFNT++TGYQE+LTDPSYA Q V +T
Sbjct: 51 RPHVTQPAILVLEDGTVFEGESVGANWLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTY 110
Query: 61 PHIGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRA 120
PHIGNTG N D+E++Q + AGL++R + S+WR L +L R ++ I +DTR
Sbjct: 111 PHIGNTGFNDQDDEAKQVWAAGLIVRDVPRRPSSWRNQVALPAWLQTRGVVAISGIDTRK 170
Query: 121 ITRRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDW 180
+TR LR+ G+ G L E ++ L + + G+DL VS + ++W E + D
Sbjct: 171 LTRLLREKGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTETTYQWQEG-QLDL 229
Query: 181 DFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ N + ++V+AYD+G+K NILR LA GC + VVP+ P +E L ++PDGV SN
Sbjct: 230 NANAFVQAELKFKVVAYDYGVKINILRMLAERGCDVTVVPARTPVAEVLAMQPDGVFLSN 289
Query: 241 GPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
GPGDP YA++ ++EL+ KVP FGIC+GHQLL A G
Sbjct: 290 GPGDPEPCDYAISAIQELIAKKVPTFGICLGHQLLALAAG 329
>gi|423138580|ref|ZP_17126218.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
gi|379051134|gb|EHY69025.1| carbamoyl-phosphate synthase, small subunit [Salmonella enterica
subsp. houtenae str. ATCC BAA-1581]
Length = 382
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L ++L NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSWLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + +S + LE ++++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDSLDAKLALEKAKAFPGLNGMDLAKEVTTAETYRWTQGS---WTLK 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K+ + V+AYDFG K NILR L GC++ VVP+ A E LK+ PDG+
Sbjct: 179 GGLPEAKSEDDLPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAIEAIEKFLQTDIPLFGICLGHQLLALANG 280
>gi|406596298|ref|YP_006747428.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
ATCC 27126]
gi|407683243|ref|YP_006798417.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'English Channel 673']
gi|407687187|ref|YP_006802360.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'Balearic Sea AD45']
gi|406373619|gb|AFS36874.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
ATCC 27126]
gi|407244854|gb|AFT74040.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'English Channel 673']
gi|407290567|gb|AFT94879.1| carbamoyl-phosphate synthase small subunit [Alteromonas macleodii
str. 'Balearic Sea AD45']
Length = 376
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/277 (45%), Positives = 178/277 (64%), Gaps = 7/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS+++ + GA+G+ VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFKGTAIGATGSAVGEVVFNTSMTGYQEILTDPSYAEQLITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +D E+ + + GL+IR L + SN+R +TL YL + ++GI D+DTR +TR LR
Sbjct: 64 GTNEEDVEADKIWSKGLIIRDLPLVASNFRQQQTLSEYLKAKGVVGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ G + + + L ++++ + G+DL VS EP W E + W+
Sbjct: 124 DKGAQNGCIICSDELDESSALAQAKAFPGLKGMDLAKVVSITEPKTWTEGS---WELGKG 180
Query: 186 --ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ Y V+A+D+G+K+NILR LA GC++ +VP+ PA + L + PDGV SNGPG
Sbjct: 181 YVTPSEFKYHVVAFDYGVKNNILRMLADRGCKVTLVPAQTPAEDVLAMNPDGVFLSNGPG 240
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YAV +K ++ PVFGIC+GHQLL A G
Sbjct: 241 DPEPCDYAVTAIKTIVETGTPVFGICLGHQLLAIASG 277
>gi|269967375|ref|ZP_06181435.1| carbamoyl-phosphate synthase, small subunit [Vibrio alginolyticus
40B]
gi|269827963|gb|EEZ82237.1| carbamoyl-phosphate synthase, small subunit [Vibrio alginolyticus
40B]
Length = 411
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/279 (46%), Positives = 173/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V T PHIGNTG
Sbjct: 37 ALLVLEDGTVFRGVSIGADGLSVGEVVFNTSMTGYQEILTDPSYSQQIVTFTYPHIGNTG 96
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 97 TTSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 156
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 157 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 213
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SNG
Sbjct: 214 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLALNPDGVFLSNG 273
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 274 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 312
>gi|187929115|ref|YP_001899602.1| carbamoyl phosphate synthase small subunit [Ralstonia pickettii
12J]
gi|187726005|gb|ACD27170.1| carbamoyl-phosphate synthase, small subunit [Ralstonia pickettii
12J]
Length = 378
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 181/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA+G +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 8 AILALADGTVFRGYSIGAAGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+I+ L I SN+R TL +YL ++ I +DTR +TR LR+
Sbjct: 68 VNREDVEATKVHAAGLIIKDLPILASNFRKEHTLSHYLKGEKVVAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E Q+ ++++RS+ + G+DL VS +P+EW T+ +W
Sbjct: 128 KGAQNGCILAGEDNV-QKAIDLARSFPGLSGMDLAKVVSVTQPYEW---TQTEWALGRGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++++ Y V+AYDFG+K NILR LA GC++ VVP+ A++ L PDGV SNGPGD
Sbjct: 184 GKQDAPKYHVVAYDFGVKFNILRMLAERGCRVTVVPAQTSAADVLAHNPDGVFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+A +E L ++P FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIAATREFLERRLPTFGICLGHQIMGLAVG 279
>gi|373852420|ref|ZP_09595220.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV5]
gi|391229813|ref|ZP_10266019.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV1]
gi|372474649|gb|EHP34659.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV5]
gi|391219474|gb|EIP97894.1| carbamoyl-phosphate synthase, small subunit [Opitutaceae bacterium
TAV1]
Length = 390
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/282 (43%), Positives = 176/282 (62%), Gaps = 11/282 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGS++R ++FGA T GE VFNTS+TGYQEI+TDPSY GQ V MT P IGN G
Sbjct: 7 AVLALEDGSVYRGRAFGADATVSGECVFNTSMTGYQEIITDPSYFGQIVTMTAPMIGNYG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ +D E+ + +G V+R LS SNWR +LG+YL + I GI ++DTRA+T++LR
Sbjct: 67 IANEDNEASRPMASGFVVRELSPVVSNWRSHASLGDYLRKYGIPGISEIDTRALTKKLRV 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWD----- 181
DG++ LST +D+E + +R+W DI G D + DV+ P+ W +++
Sbjct: 127 DGAMKCCLST-LPLTDEEAVSRARAWQDIAGSDYVKDVTCDAPYVWSAEDPANYNLAYLP 185
Query: 182 ----FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+K ++V A+DFG KH I R+L +G ++V P+T A++ + PDG+
Sbjct: 186 AGTTLGAPHPVTKRFKVAAFDFGAKHTIFRKLVRHGFDVLVFPATATAAQIREHAPDGLF 245
Query: 238 FSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+A+ Y V +LL P FGIC+GHQ++ ALG
Sbjct: 246 LSNGPGDPAALAYVHKTVTDLLPDFPTFGICLGHQMITHALG 287
>gi|253999585|ref|YP_003051648.1| carbamoyl-phosphate synthase small subunit [Methylovorus
glucosetrophus SIP3-4]
gi|253986264|gb|ACT51121.1| carbamoyl-phosphate synthase, small subunit [Methylovorus
glucosetrophus SIP3-4]
Length = 378
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R S GA G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 7 AMLVLADGTVFRGISIGAQGHTVGEVVFNTSITGYQEILTDPSYTKQIVTLTYPHIGNVG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES Q + +GL+IR L + S WR +TL +YLA N++ I D+DTR +TR LR+
Sbjct: 67 VNTEDVESGQVYASGLIIRDLPLTDSCWRSQQTLSDYLAANNVVAIADIDTRKLTRILRE 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + T E+ + + +E++R++ + G+DL VS + + + E +W +
Sbjct: 127 KGAQAGCIITGEA-DEAKAIELARAFPGLAGMDLAKVVSCTQSYTFDEG---EWVLGSGY 182
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + Y V+A+D+G+K NILR L + GC++ V+P+ A + L L PDG+ SNGPGD
Sbjct: 183 AKPEASRYHVVAFDYGVKRNILRMLTARGCKVTVLPAQASAEDALALNPDGIFLSNGPGD 242
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ ++ ++ + VP FGIC+GHQLL A G
Sbjct: 243 PEPCDYAIEAIRTVVDRGVPTFGICLGHQLLALASG 278
>gi|383456507|ref|YP_005370496.1| carbamoyl phosphate synthase small subunit [Corallococcus
coralloides DSM 2259]
gi|380732257|gb|AFE08259.1| carbamoyl phosphate synthase small subunit [Corallococcus
coralloides DSM 2259]
Length = 375
Score = 249 bits (637), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 175/276 (63%), Gaps = 6/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+ + ++FGASG VGEVVFNTS+ GYQEILTDPSY GQ V M P +GN G
Sbjct: 5 AVLALADGTTFEGRAFGASGETVGEVVFNTSMYGYQEILTDPSYVGQIVTMAYPEMGNIG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N DEE+ G+V+RSL+ SNWR ETL YLA +GI VDTR + R LR
Sbjct: 65 ANATDEEAGLPHAVGMVVRSLTKTPSNWRSQETLDAYLARHGRVGIEGVDTRRLVRHLRT 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G++ST E+ S L E +R+ + G+DL + VS KEP+ + + PD +
Sbjct: 125 HGAQTGIIST-ENVSAAALSERARTAVGMEGLDLATGVSCKEPYVFT-TPSPDVFLAPGD 182
Query: 187 RNSK---TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + Y VIAYD+G+K ++L+ L GC++ VVPS + A + L KP GV +NGPG
Sbjct: 183 KRPEPELKYDVIAYDYGLKRSMLQYLVDVGCRVTVVPSHFTAEQVLAKKPHGVFLANGPG 242
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP+AV A V LLGKVPVFGIC+GHQ++ ALG
Sbjct: 243 DPAAVKGADRTVAALLGKVPVFGICLGHQIMALALG 278
>gi|310821288|ref|YP_003953646.1| carbamoyl-phosphate synthase small subunit [Stigmatella aurantiaca
DW4/3-1]
gi|309394360|gb|ADO71819.1| Carbamoyl-phosphate synthase, small subunit [Stigmatella aurantiaca
DW4/3-1]
Length = 371
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/277 (48%), Positives = 176/277 (63%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DG+++ ++FGA G VGEVVFNTS+ GYQEILTDPSY GQ V M P +GN
Sbjct: 3 KAVLVLADGTVFEGRAFGAHGETVGEVVFNTSMMGYQEILTDPSYVGQVVTMAYPEMGNV 62
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEE+ + G+V+R LS +SNWR ETL YL + GI VDTR + R LR
Sbjct: 63 GANPEDEEAGKPHAVGMVVRMLSEKSSNWRAQETLDVYLKWHGVAGIQGVDTRRLVRHLR 122
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD-FNT 184
G+ G++S+ E+ S L E +RS + G+DL + VS KEP+ + T P D F
Sbjct: 123 MHGAQQGIISS-ENHSPAALAERARSTPGMEGLDLATGVSTKEPYTF---TTPSQDVFGG 178
Query: 185 HERNSKTYR--VIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
R + R V+AYD+G+K ++L+ L GC++ VVP+ A + L KP GV +NGP
Sbjct: 179 TPRATPPPRFDVVAYDYGLKRSMLQFLVDEGCRVTVVPAATTAEQVLARKPHGVFLANGP 238
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP+AV A V LLGKVPVFGIC+GHQ+L ALG
Sbjct: 239 GDPAAVKGADRTVANLLGKVPVFGICLGHQILALALG 275
>gi|258623840|ref|ZP_05718794.1| carbamoyl-phosphate synthase, small subunit [Vibrio mimicus VM603]
gi|258583829|gb|EEW08624.1| carbamoyl-phosphate synthase, small subunit [Vibrio mimicus VM603]
Length = 379
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 175/280 (62%), Gaps = 10/280 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G + +DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR
Sbjct: 64 GTSSEDEESTAIHAQGLVIRDLPLIASNFRSEKSLSDYLKSQNIVGIADIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+ G+ G + + + L ++ + + G+DL V+ +E ++W + + W
Sbjct: 124 EKGAQNGCIMAGDKLDEALALAKAKEFPGLKGMDLAKVVTTQEAYQWKQGS---WTLEGG 180
Query: 186 ERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+K Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV SN
Sbjct: 181 LPEAKADCDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GPGDP YA+ + L K +PVFGIC+GHQ+L A G
Sbjct: 241 GPGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASG 280
>gi|238755528|ref|ZP_04616867.1| Carbamoyl-phosphate synthase small subunit [Yersinia ruckeri ATCC
29473]
gi|238706284|gb|EEP98662.1| Carbamoyl-phosphate synthase small subunit [Yersinia ruckeri ATCC
29473]
Length = 387
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 173/282 (61%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFYGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSSVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + E ++++ + G+DL +V+ +E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGNLTDAAVAWEKAKAFPGLKGMDLAKEVTTREAYTWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GELPAAKKAEELPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASG 280
>gi|415859927|ref|ZP_11534040.1| carbamoyl-phosphate synthase small chain [Shigella flexneri 2a str.
2457T]
gi|420318504|ref|ZP_14820364.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
2850-71]
gi|313646592|gb|EFS11053.1| carbamoyl-phosphate synthase small chain [Shigella flexneri 2a str.
2457T]
gi|391255347|gb|EIQ14495.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
2850-71]
Length = 376
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 174/277 (62%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 DADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 121 AQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLTGGLPE 177
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+ SNGPG
Sbjct: 178 AKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 274
>gi|157413275|ref|YP_001484141.1| carbamoyl phosphate synthase small subunit [Prochlorococcus marinus
str. MIT 9215]
gi|157387850|gb|ABV50555.1| carbamoyl-phosphate synthase small chain [Prochlorococcus marinus
str. MIT 9215]
Length = 379
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA+LVL +G ++ FGASGT +GE+VFNT +TGYQE++TDPSY GQ + T P IGNT
Sbjct: 8 NAKLVLSNGIVFPGFYFGASGTAIGEIVFNTGMTGYQEVITDPSYYGQILTFTYPEIGNT 67
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+NF+D ES + + G+++R+ S SNWR + +L ++NI+G++ +DTRA+ + LR
Sbjct: 68 GINFEDSES-EINVKGIIVRNFSSNNSNWRSKKNFNQWLIDKNIVGLHGIDTRALVKILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
+GS+ GV+++E+ + L + + G++L VS K+ + W T+ +D +
Sbjct: 127 SNGSMNGVITSEDKNVESCLKIIHDIPKMEGLNLSKVVSTKKQYLWNSHTRTVFDLRKRY 186
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+SK +++A DFGIK++IL RL S+GC+++V+ S + L KPDG+ FSNGPGDP
Sbjct: 187 ADSSKKLKIVAIDFGIKNSILNRLVSHGCEVLVLSSRSTLKDVLYNKPDGIFFSNGPGDP 246
Query: 246 SAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
S+V + + K L+ G++P+FGIC+GHQ+ G ALG
Sbjct: 247 SSVSEGIDLAKSLIEYGEIPMFGICLGHQIFGLALG 282
>gi|91201193|emb|CAJ74253.1| strongly similar to carbamoyl-phosphate synthase small chain
[Candidatus Kuenenia stuttgartiensis]
Length = 373
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 178/278 (64%), Gaps = 9/278 (3%)
Query: 3 WNVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPH 62
N A LVLEDG+ + S GA+G +GE+VFNTS+ GYQEILTDPSYAGQ V +T P
Sbjct: 1 MNEKKAILVLEDGTCFNGCSLGAAGETIGELVFNTSMMGYQEILTDPSYAGQLVALTYPL 60
Query: 63 IGNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAIT 122
IGN G+N +D ES + FL G +++ S +SNWR L YL + I+GI +DTRA+T
Sbjct: 61 IGNYGINEEDIESYRLFLEGFIVKECSPFSSNWRSKIDLSEYLTKNGIVGIQGIDTRALT 120
Query: 123 RRLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWV-ESTKPDWD 181
++R GS G++ST + + + + + G DL++ V+ ++P++WV + P
Sbjct: 121 CQIRDFGSQQGIISTIDFDRTRLQEKAKSAPGLTGRDLVAKVTCEKPYDWVNKKGTPHL- 179
Query: 182 FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
S+ Y+VI YD G+K++ILR+LA GC + VVP+ L++ PDG++ SNG
Sbjct: 180 -------SRKYKVIVYDCGVKYSILRKLAHAGCSVHVVPAKTSFETVLEMNPDGIVLSNG 232
Query: 242 PGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDPS V Y + +K LLGK P+FGIC+GHQLL ALG
Sbjct: 233 PGDPSVVSYMIENIKGLLGKRPIFGICLGHQLLALALG 270
>gi|414574210|ref|ZP_11431425.1| carbamoyl-phosphate synthase small chain [Shigella sonnei 3233-85]
gi|415802151|ref|ZP_11499966.1| carbamoyl-phosphate synthase small chain [Escherichia coli E128010]
gi|416895376|ref|ZP_11925277.1| carbamoyl-phosphate synthase small chain [Escherichia coli STEC_7v]
gi|417584098|ref|ZP_12234892.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_B2F1]
gi|417589645|ref|ZP_12240366.1| carbamoyl-phosphate synthase small chain [Escherichia coli 2534-86]
gi|417670964|ref|ZP_12320466.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
155-74]
gi|417684068|ref|ZP_12333409.1| carbamoyl-phosphate synthase small chain [Shigella boydii 3594-74]
gi|419326842|ref|ZP_13868480.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC12C]
gi|420284460|ref|ZP_14786680.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW10246]
gi|420345101|ref|ZP_14846536.1| carbamoyl-phosphate synthase small chain [Shigella boydii 965-58]
gi|421815548|ref|ZP_16251238.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
8.0416]
gi|424100338|ref|ZP_17835547.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1990]
gi|424107162|ref|ZP_17841783.1| carbamoylphosphate synthetase small subunit [Escherichia coli
93-001]
gi|424113137|ref|ZP_17847336.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA3]
gi|424131489|ref|ZP_17864345.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA10]
gi|424453101|ref|ZP_17904688.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA33]
gi|424465840|ref|ZP_17916077.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA41]
gi|424566582|ref|ZP_18007548.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4448]
gi|425147333|ref|ZP_18547297.1| carbamoyl-phosphate synthase small chain [Escherichia coli 10.0869]
gi|425153381|ref|ZP_18552968.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA34]
gi|425159843|ref|ZP_18559053.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA506]
gi|425183670|ref|ZP_18581330.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1997]
gi|425196701|ref|ZP_18593393.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE037]
gi|425308784|ref|ZP_18698296.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1735]
gi|425320787|ref|ZP_18709508.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1737]
gi|425345435|ref|ZP_18732283.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1849]
gi|428987362|ref|ZP_19056689.1| carbamoyl-phosphate synthase small chain [Escherichia coli 93.0056]
gi|429011862|ref|ZP_19079151.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0943]
gi|429059063|ref|ZP_19123235.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0007]
gi|429823510|ref|ZP_19355067.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0109]
gi|444922223|ref|ZP_21241988.1| carbamoyl-phosphate synthase small chain [Escherichia coli
09BKT078844]
gi|444950636|ref|ZP_21268880.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0848]
gi|444967169|ref|ZP_21284655.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1793]
gi|445037864|ref|ZP_21353347.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA35]
gi|323160050|gb|EFZ46013.1| carbamoyl-phosphate synthase small chain [Escherichia coli E128010]
gi|327255007|gb|EGE66610.1| carbamoyl-phosphate synthase small chain [Escherichia coli STEC_7v]
gi|332090326|gb|EGI95424.1| carbamoyl-phosphate synthase small chain [Shigella boydii 3594-74]
gi|332098344|gb|EGJ03317.1| carbamoyl-phosphate synthase small chain [Shigella dysenteriae
155-74]
gi|345332329|gb|EGW64787.1| carbamoyl-phosphate synthase small chain [Escherichia coli
STEC_B2F1]
gi|345346003|gb|EGW78339.1| carbamoyl-phosphate synthase small chain [Escherichia coli 2534-86]
gi|378177742|gb|EHX38530.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC12C]
gi|390670860|gb|EIN47348.1| carbamoylphosphate synthetase small subunit [Escherichia coli
93-001]
gi|390674783|gb|EIN50948.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1990]
gi|390689900|gb|EIN64802.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA3]
gi|390709673|gb|EIN82751.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA10]
gi|390758032|gb|EIO27500.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA33]
gi|390777168|gb|EIO45012.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA41]
gi|390796248|gb|EIO63524.1| carbamoylphosphate synthetase small subunit [Escherichia coli
TW10246]
gi|390917591|gb|EIP76008.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC4448]
gi|391276884|gb|EIQ35645.1| carbamoyl-phosphate synthase small chain [Shigella boydii 965-58]
gi|391290095|gb|EIQ48570.1| carbamoyl-phosphate synthase small chain [Shigella sonnei 3233-85]
gi|408087266|gb|EKH20715.1| carbamoylphosphate synthetase small subunit [Escherichia coli PA34]
gi|408091871|gb|EKH25070.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FDA506]
gi|408117328|gb|EKH48513.1| carbamoylphosphate synthetase small subunit [Escherichia coli
FRIK1997]
gi|408131494|gb|EKH61536.1| carbamoylphosphate synthetase small subunit [Escherichia coli
NE037]
gi|408240913|gb|EKI63564.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1735]
gi|408254705|gb|EKI76203.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1737]
gi|408280299|gb|EKI99851.1| carbamoylphosphate synthetase small subunit [Escherichia coli
EC1849]
gi|408587312|gb|EKK61968.1| carbamoyl-phosphate synthase small chain [Escherichia coli 10.0869]
gi|408597943|gb|EKK71913.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
8.0416]
gi|427252261|gb|EKW18750.1| carbamoyl-phosphate synthase small chain [Escherichia coli 93.0056]
gi|427271607|gb|EKW36398.1| carbamoyl-phosphate synthase small chain [Escherichia coli 95.0943]
gi|427323667|gb|EKW85221.1| carbamoyl-phosphate synthase small chain [Escherichia coli 97.0007]
gi|429260713|gb|EKY44244.1| carbamoyl-phosphate synthase small chain [Escherichia coli 96.0109]
gi|444552347|gb|ELV30185.1| carbamoyl-phosphate synthase small chain [Escherichia coli
09BKT078844]
gi|444572878|gb|ELV49279.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.0848]
gi|444587139|gb|ELV62609.1| carbamoyl-phosphate synthase small chain [Escherichia coli 99.1793]
gi|444664408|gb|ELW36596.1| carbamoyl-phosphate synthase small chain [Escherichia coli PA35]
Length = 376
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 174/277 (62%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 DADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 121 AQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLTGGLPE 177
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+ SNGPG
Sbjct: 178 AKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 274
>gi|419157032|ref|ZP_13701576.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC6C]
gi|425113343|ref|ZP_18515199.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
8.0566]
gi|425118096|ref|ZP_18519851.1| carbamoyl-phosphate synthase small chain [Escherichia coli 8.0569]
gi|425270735|ref|ZP_18662261.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TW15901]
gi|377989485|gb|EHV52652.1| carbamoyl-phosphate synthase small chain [Escherichia coli DEC6C]
gi|408200872|gb|EKI26047.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
TW15901]
gi|408574061|gb|EKK49856.1| carbamoyl-phosphate synthase, small subunit [Escherichia coli
8.0566]
gi|408574740|gb|EKK50499.1| carbamoyl-phosphate synthase small chain [Escherichia coli 8.0569]
Length = 376
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 174/277 (62%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 DADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 121 AQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLTGGLPE 177
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+ SNGPG
Sbjct: 178 AKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 274
>gi|119478513|ref|ZP_01618475.1| carbamoyl-phosphate synthase small subunit [marine gamma
proteobacterium HTCC2143]
gi|119448494|gb|EAW29742.1| carbamoyl-phosphate synthase small subunit [marine gamma
proteobacterium HTCC2143]
Length = 379
Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 179/280 (63%), Gaps = 12/280 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDGSI+R + GA+G VGEVVFNT++TGYQEILTDPSYA Q + +T PHIGNTG
Sbjct: 5 AILALEDGSIFRGVAIGATGHSVGEVVFNTAMTGYQEILTDPSYARQIITLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE+ + AGLVIR L + S++R ++L +YL RN++GI D+DTR +TR LR
Sbjct: 65 TNSEDEEAADIWSAGLVIRDLPLLASSFRNEQSLQDYLVARNVIGIADIDTRRLTRILRD 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWD----- 181
G+ G + + ++ + ++ +D + G+DL VS + W + + WD
Sbjct: 125 KGAQNGCIMAGD-IDEEAAMRYAKGFDGLKGMDLAKVVSTTSEYTWQQGS---WDSEREQ 180
Query: 182 -FNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ + N Y V+AYDFG+K NILR L GC++ VVP+ A++ L + PDGV SN
Sbjct: 181 SYREYSDNDCDYHVVAYDFGVKRNILRMLVDRGCRLTVVPAQTSAADVLAMNPDGVFLSN 240
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP YAV ++ LL +PVFGIC+GHQLL A G
Sbjct: 241 GPGDPEPCTYAVEAIQCLLETDIPVFGICLGHQLLAIASG 280
>gi|334123502|ref|ZP_08497527.1| carbamoyl-phosphate synthase, small subunit [Enterobacter
hormaechei ATCC 49162]
gi|333390711|gb|EGK61843.1| carbamoyl-phosphate synthase, small subunit [Enterobacter
hormaechei ATCC 49162]
Length = 391
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFIGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNAADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ E + W T+ W
Sbjct: 131 LREKGAQNGCIIAGDNLDATLALEKAKAFLGLNGMDLAKEVTTAEAYSW---TQGSWTLE 187
Query: 184 THERNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ A + LK+ PDG+
Sbjct: 188 GDLPEAKPESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAIDAIKSFLETDIPVFGICLGHQLLALASG 289
>gi|383812820|ref|ZP_09968247.1| carbamoyl phosphate synthase small subunit [Serratia sp. M24T3]
gi|383298230|gb|EIC86537.1| carbamoyl phosphate synthase small subunit [Serratia sp. M24T3]
Length = 382
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT +GEVVFNTS+TGYQEI+TDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAIGEVVFNTSMTGYQEIITDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R ETL +YL NI+GI D+DTR +TR
Sbjct: 62 NVGTNAADEESSAVHAQGLVIRDLPLIASNYRNEETLSDYLKRHNIVGIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
L + G+ G + ++ LE ++++ + G+DL +VS +E + W + + W
Sbjct: 122 LSEKGAQNGCIIAGDAIDAALALEKAKAFPGLKGMDLAKEVSTQESYSWQQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GDLPEAKKAEDLPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L ++PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIEAIKTFLTTEIPVFGICLGHQLLALASG 280
>gi|440733327|ref|ZP_20913079.1| carbamoyl phosphate synthase small subunit [Xanthomonas translucens
DAR61454]
gi|440362916|gb|ELQ00093.1| carbamoyl phosphate synthase small subunit [Xanthomonas translucens
DAR61454]
Length = 371
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/264 (46%), Positives = 174/264 (65%), Gaps = 2/264 (0%)
Query: 17 IWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESR 76
++ +S GA+G VGEVVFNT++TGYQEILTDPSYA Q + +T PHIGNTG D+E+
Sbjct: 1 MFEGESVGAAGLSVGEVVFNTAMTGYQEILTDPSYARQLITLTYPHIGNTGCTDQDDEAA 60
Query: 77 QCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLS 136
Q + AGL++RS+ SNWR +L ++L +R ++ I +DTR +TR LR+ GS G +
Sbjct: 61 QVWSAGLIVRSVPRRPSNWRSQVSLPDWLIQRGVVAIAGIDTRKLTRILREKGSQNGAVM 120
Query: 137 TEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNSKTYRVIA 196
E + L + + G+DL VS + + W + + D D N + + TY+V+A
Sbjct: 121 AGEVNVETALEAARKFPGLKGMDLAKVVSTDKAYPWRDG-QLDLDSNAFAQAAPTYKVVA 179
Query: 197 YDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVK 256
YD+G+K NILR LA GC++ VVP+ PA+E L ++PDGV SNGPGDP+ YA+A +K
Sbjct: 180 YDYGVKLNILRMLAERGCEVTVVPAQTPAAEVLAMQPDGVFLSNGPGDPAPCDYAIAAIK 239
Query: 257 ELLG-KVPVFGICMGHQLLGQALG 279
+++ K+P FGIC+GHQLL A G
Sbjct: 240 QIVASKIPTFGICLGHQLLALAAG 263
>gi|402758205|ref|ZP_10860461.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp. NCTC
7422]
Length = 379
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/286 (45%), Positives = 181/286 (63%), Gaps = 24/286 (8%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDVESGRIHKVWANGLIIRDLPLLHSNFRAEQSLSEYLEQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVES-------- 175
LR G+ G + E+ +++E + +R++ + G+DL + FEW E
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPTGFEWTEGSWTLGQGF 184
Query: 176 TKPDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDG 235
T+P++ F+ V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDG
Sbjct: 185 TQPEFKFH----------VVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEKVLALNPDG 234
Query: 236 VLFSNGPGDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
V SNGPGDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 235 VFLSNGPGDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|348029577|ref|YP_004872263.1| carbamoyl-phosphate synthase small subunit [Glaciecola
nitratireducens FR1064]
gi|347946920|gb|AEP30270.1| carbamoyl-phosphate synthase small subunit [Glaciecola
nitratireducens FR1064]
Length = 379
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 177/278 (63%), Gaps = 8/278 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDGS++ + G G VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLEDGSVFNGTAIGCVGHSVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D ES + + GL+IR L + SN+R +TL +YL + NI+ I D+DTR +TR LR
Sbjct: 64 GVNSEDVESDKIWAKGLIIRDLPLIASNFRSEQTLSDYLVDNNIVAIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G+ G + T + + ++ L ++++ + G+DL V+ E EW + + W
Sbjct: 124 DKGAQRGCIVTAGALTQEQALAEAKAFPGLKGMDLAKVVTRVEQTEWTDGS---WQLGKG 180
Query: 186 ---ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
++ Y V+AYDFG K NILR L GC++ +VP+ A++ L L PDG+ SNGP
Sbjct: 181 YDIDKQDLPYHVVAYDFGAKSNILRMLVDRGCKLTLVPAQTSAADVLALNPDGIFLSNGP 240
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA+ +K L K +P+FGIC+GHQLL A G
Sbjct: 241 GDPEPCDYAIEAIKVFLEKSIPIFGICLGHQLLALASG 278
>gi|424744758|ref|ZP_18173042.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
baumannii WC-141]
gi|422942658|gb|EKU37704.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
baumannii WC-141]
Length = 379
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/279 (46%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGNTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL N++ I D+DTR +TR
Sbjct: 65 CNAEDVESGRIHKVWANGLIIRDLPLLHSNFRAEQSLSEYLQAHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LRQ G+ G + E+ +++E + +R++ + G+DL + FEW E + W
Sbjct: 125 LRQTGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPTGFEWSEGS---WTLG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 KGFSQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAETPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|381393885|ref|ZP_09919603.1| carbamoyl-phosphate synthase small subunit [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379330157|dbj|GAB54736.1| carbamoyl-phosphate synthase small subunit [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 382
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 181/283 (63%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVL DGS+++ + GA+G+ VGEVVFNTS+TGYQEILTDPSYA Q + +T PHIGNT
Sbjct: 4 SALLVLADGSVFKGTAIGATGSSVGEVVFNTSMTGYQEILTDPSYAEQIITLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES Q + GLVIR L + SN+R ++L +YL N++GI D+DTR +TR LR
Sbjct: 64 GINSEDVESGQVWAKGLVIRDLPLVASNFRSQQSLSDYLLANNVIGIADIDTRRLTRILR 123
Query: 127 QDGSLIGVLSTEESKSD-----QELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW 180
G+ G + + E+ SD ++ L ++ + + G+DL S ++ +E+ W
Sbjct: 124 DKGAQNGCILSLENLSDIDSVIEKALAQAKGFAGLKGMDLAKVASCEKHYEFTHGI---W 180
Query: 181 DFNTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+ T Y V+AYDFG K NILR L GC++ VVP+ A + L LKPDG+
Sbjct: 181 HLESGYDTQITNLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAKDVLALKPDGIF 240
Query: 238 FSNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ +K + ++P+FGIC+GHQLL A G
Sbjct: 241 LSNGPGDPQPCDYAISAIKTFIDEQIPMFGICLGHQLLALAAG 283
>gi|407697687|ref|YP_006822475.1| carbamoyl-phosphate synthase small subunit [Alcanivorax dieselolei
B5]
gi|407255025|gb|AFT72132.1| Carbamoyl-phosphate synthase, small subunit [Alcanivorax dieselolei
B5]
Length = 350
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/254 (49%), Positives = 170/254 (66%), Gaps = 7/254 (2%)
Query: 30 VGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESRQCFLAGLVIRSLS 89
+GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTGVN +DEES + + AGL+IR L+
Sbjct: 1 MGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHIGNTGVNEEDEESSRVWAAGLIIRDLT 60
Query: 90 IGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTEESKSDQELLEM 149
+ S+WR ++L YL +RNI+ I D+DTR +TR LR+ G+ G + + +++ L
Sbjct: 61 LTVSSWRAEQSLPEYLQQRNIVAIADIDTRRLTRILREKGAQNGCIVAGDDIDEEKALAA 120
Query: 150 SRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNSKT--YRVIAYDFGIKHNIL 206
+R++ + G+DL +VS E + W E T W R + V+AYDFG K NI
Sbjct: 121 ARAFPGLKGMDLAKEVSVSESYTWTEGT---WVRGEGHRAQAEALFNVVAYDFGCKRNIF 177
Query: 207 RRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELLG-KVPVF 265
R LA GC++ VVP+ PASE L + PDGV +NGPGDP YA+ ++E+L K+P+F
Sbjct: 178 RMLADRGCKLTVVPAQTPASEVLAMNPDGVFLANGPGDPEPCDYAIEAIREILERKLPLF 237
Query: 266 GICMGHQLLGQALG 279
GIC+GHQLLG A G
Sbjct: 238 GICLGHQLLGLASG 251
>gi|451975647|ref|ZP_21926831.1| carbamoyl-phosphate synthase small chain [Vibrio alginolyticus
E0666]
gi|451930390|gb|EMD78100.1| carbamoyl-phosphate synthase small chain [Vibrio alginolyticus
E0666]
Length = 379
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 173/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFHGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TTSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIVAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLAMNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|293609983|ref|ZP_06692285.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423430|ref|ZP_18913583.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
baumannii WC-136]
gi|292828435|gb|EFF86798.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699775|gb|EKU69379.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
baumannii WC-136]
Length = 379
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL E N++ I D+DTR +TR
Sbjct: 65 CNAEDVESGRIHKVWANGLIIRDLPLLHSNFRAEQSLSEYLQEHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E + +R++ + G+DL + FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPTGFEWSEGS---WTLG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 QGFSQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAETPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|323142840|ref|ZP_08077552.1| carbamoyl-phosphate synthase, small subunit [Succinatimonas hippei
YIT 12066]
gi|322417382|gb|EFY08004.1| carbamoyl-phosphate synthase, small subunit [Succinatimonas hippei
YIT 12066]
Length = 379
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/280 (48%), Positives = 183/280 (65%), Gaps = 8/280 (2%)
Query: 5 VANARLVLEDGSIWRAKSFGASG-TQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
V +A L L DG++++ K FG G T+ GEVVFNTS+TGYQEILTDPSY Q V +T PHI
Sbjct: 2 VTSAILALADGTVFKGKGFGLPGVTETGEVVFNTSMTGYQEILTDPSYTRQLVTLTYPHI 61
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GN G N +D ES AGL+I+ LS +SN+R + +L +YL + GIY +DTR +TR
Sbjct: 62 GNYGTNNEDFESADICAAGLIIKDLSSVSSNFRSSLSLSDYLKKHGKAGIYGIDTRMLTR 121
Query: 124 RLRQDGSLIGVLSTEESKS-DQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDF 182
+R+ G+ G L+T+ S + ++ + + G+DL S V+ KEP+ W E +W
Sbjct: 122 LIREKGAQSGCLTTDPSMTPEKAVAAARAFAGLKGMDLASVVTTKEPYIWTEG---EWQL 178
Query: 183 NTHERNSKT--YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
N+ + V+AYDFGIK NILR LAS GC+I VVP+T AS+ L + PDGV SN
Sbjct: 179 GKGYVNNDNPEFNVVAYDFGIKRNILRMLASRGCKITVVPATTKASDVLAMNPDGVFLSN 238
Query: 241 GPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GPGDP YA+ ++EL+ KVP+FGIC+GHQLLG A G
Sbjct: 239 GPGDPEPCSYAIEAIQELMKAKVPLFGICLGHQLLGLASG 278
>gi|225872351|ref|YP_002753806.1| carbamoyl-phosphate synthase small subunit [Acidobacterium
capsulatum ATCC 51196]
gi|225791948|gb|ACO32038.1| carbamoyl-phosphate synthase, small subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 376
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/279 (47%), Positives = 173/279 (62%), Gaps = 12/279 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I+R + GA G GEVVFNTSLTGYQEI TDPSYAGQ V++TNP IGN G
Sbjct: 3 AILALEDGRIFRGEGHGARGECYGEVVFNTSLTGYQEIFTDPSYAGQIVVLTNPQIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N D E+ Q ++ GLV R S +SNWR + YL + I ++DTRA+ R LR
Sbjct: 63 TNHADNEANQPYIEGLVTREFSPISSNWRSQQVADEYLERFKVPVISEIDTRAVVRHLRN 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G + GV+S+ E+ D L++ +RS + G DL S V+ K +EW + D H+
Sbjct: 123 HGVMRGVISSIETDPDV-LVQKARSLRKMDGTDLASVVTTKARYEW----EHDIHDPLHQ 177
Query: 187 RN------SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSN 240
+ V+AYDFGIK NILR L+ GC++ VVP+ A + L L PDG+ SN
Sbjct: 178 EDLVIAPERPDLHVVAYDFGIKKNILRMLSREGCRVTVVPAQTSAEDVLSLNPDGIFLSN 237
Query: 241 GPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GPGDP V YA +++L G+ P+FGIC+GHQL+G ALG
Sbjct: 238 GPGDPEPVTYAQENIRQLAGRKPMFGICLGHQLIGLALG 276
>gi|197122645|ref|YP_002134596.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter sp. K]
gi|196172494|gb|ACG73467.1| carbamoyl-phosphate synthase, small subunit [Anaeromyxobacter sp.
K]
Length = 373
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 171/275 (62%), Gaps = 4/275 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG+ + S GA+G GEVVFNTS+TGYQEILTDPSY Q + MT P GN
Sbjct: 3 QAILALADGTTFEGFSLGATGEATGEVVFNTSMTGYQEILTDPSYVDQMICMTYPEQGNY 62
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DEES + G ++R + SN+R +L YLA I+GI +DTR +TR +R
Sbjct: 63 GVNRADEESARPHATGFIVRHAAEQPSNFRAERSLHAYLAAHGIVGISGIDTRRLTRHIR 122
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW-DFNT 184
G+ +GV++TE S + L+E +R+ + G DL + +S P+EW E W D
Sbjct: 123 TAGAQMGVIATEGSA--KALVERARALPGMEGQDLATRISTAAPYEWTEQGADRWTDAER 180
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ V+AYD+G+K +LR LA GC++ VVPS A+E L L+PDGV +NGPGD
Sbjct: 181 APLGRPRFHVVAYDWGLKRAMLRLLAEAGCRVTVVPSRTSAAEALALRPDGVFLTNGPGD 240
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P+AV A V LLGKVPVFGIC+GHQ+L A+G
Sbjct: 241 PAAVAGARETVAALLGKVPVFGICLGHQILALAIG 275
>gi|399154893|ref|ZP_10754960.1| carbamoyl-phosphate synthase small subunit [gamma proteobacterium
SCGC AAA007-O20]
Length = 373
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/275 (46%), Positives = 176/275 (64%), Gaps = 3/275 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
NA L LE+G I+ KS G+ G VGEVVFNT++TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 NAILALENGQIFWGKSIGSKGETVGEVVFNTAMTGYQEILTDPSYSKQIVALTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N DEES + AGL+IR L I SNWR +L YL+ NI+ I ++DTRA+TR LR
Sbjct: 64 GINKVDEESSGVYAAGLIIRDLPISHSNWRSEMSLEKYLSSNNIVAISNIDTRALTRHLR 123
Query: 127 QDGSLIG-VLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
+G+L G +L+ SDQ + + + +DL VS + + + + + D + +
Sbjct: 124 INGALKGCILAANNINSDQAIKKAKAFSGLKNMDLAKVVSTTKTYTFGQGSY-DLEQSDF 182
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ + ++V YD+G+K NILR L GC++ V + PA + L + PDG+ SNGPGDP
Sbjct: 183 RKATSKFKVAVYDYGVKKNILRMLVDRGCELTVFNAESPAEDVLDINPDGIFLSNGPGDP 242
Query: 246 SAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
YA+ +K+LL K +P+FGIC+GHQLL A G
Sbjct: 243 EPCDYAIDNIKKLLEKGLPIFGICLGHQLLSLASG 277
>gi|262395248|ref|YP_003287102.1| carbamoyl-phosphate synthase small chain [Vibrio sp. Ex25]
gi|262338842|gb|ACY52637.1| carbamoyl-phosphate synthase small chain [Vibrio sp. Ex25]
Length = 379
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 173/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFHGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 65 TTSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQNGCIFAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 181
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SNG
Sbjct: 182 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLAMNPDGVFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 280
>gi|414152979|ref|ZP_11409306.1| Carbamoyl-phosphate synthase small chain [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455361|emb|CCO07208.1| Carbamoyl-phosphate synthase small chain [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 359
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/274 (46%), Positives = 179/274 (65%), Gaps = 17/274 (6%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L LEDG+++ FGA G Q GEVVFNT +TGYQE+LTDPSY GQ V+MT P IGN
Sbjct: 2 QAYLALEDGTVYAGTGFGAGGEQWGEVVFNTGMTGYQEVLTDPSYCGQIVVMTYPLIGNY 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N DD E++ F+ G V++ SNWR + + +LA + I+GI +DTRA+TRR+R
Sbjct: 62 GINKDDFEAKSSFVRGFVVKEACYRPSNWRVSNKIDEFLARQGIIGIAGIDTRALTRRIR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
G++ GV+ T + +EL+E ++S I G +L+ V+ KE + V + P
Sbjct: 122 NYGTMRGVICT-GAVDPRELVEKAKSCPPISGQELVPTVATKEIYT-VPGSGP------- 172
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
R+ DFG K NI+R L + GC++IV+P T A++ L L P GV+ SNGPGDP
Sbjct: 173 -------RIALLDFGAKANIIRCLNNRGCEVIVLPPTTAAADILALNPQGVMLSNGPGDP 225
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+ VPYA+ VK+L+G++P+FGIC+GHQ+LG A+G
Sbjct: 226 TDVPYAIQTVKQLIGQLPIFGICLGHQILGLAVG 259
>gi|254445317|ref|ZP_05058793.1| carbamoyl-phosphate synthase, small subunit [Verrucomicrobiae
bacterium DG1235]
gi|198259625|gb|EDY83933.1| carbamoyl-phosphate synthase, small subunit [Verrucomicrobiae
bacterium DG1235]
Length = 385
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 174/278 (62%), Gaps = 10/278 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
L LEDGS++R +FGA T VGE VFNTS+TGYQEILTDPSY GQ + MT P IGN GVN
Sbjct: 9 LALEDGSVFRGIAFGAKKTVVGEAVFNTSMTGYQEILTDPSYYGQIITMTAPMIGNYGVN 68
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D E+ Q AG V+R LS SNWR TL +YL + I GI VDTRAIT++LR DG
Sbjct: 69 EEDVEADQPMCAGFVVRELSPIASNWRSTATLPDYLEKNGIPGIEGVDTRAITKKLRVDG 128
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
++ +STE+ SD E ++ ++ W+ IVG D + +V+ K F + S +W +N
Sbjct: 129 AMKCCISTEDI-SDDEAVKRAKEWEGIVGADYVKEVTCKSTFVYGPSDA-NWPYNPIKSV 186
Query: 184 --THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
R + ++V A D G K +I R LA +G ++ V P+T A E + PDG+ SNG
Sbjct: 187 IRKPSREREIFKVAALDLGAKKSIFRELAFHGFEVHVFPATAKAEEIKAISPDGIFLSNG 246
Query: 242 PGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
PGDP V Y V+ L+ P+FGIC+GHQ++ A+G
Sbjct: 247 PGDPEPVTYVHETVRALIDDYPIFGICLGHQIITHAIG 284
>gi|298370195|ref|ZP_06981511.1| carbamoyl-phosphate synthase, small subunit [Neisseria sp. oral
taxon 014 str. F0314]
gi|298281655|gb|EFI23144.1| carbamoyl-phosphate synthase, small subunit [Neisseria sp. oral
taxon 014 str. F0314]
Length = 376
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/277 (46%), Positives = 176/277 (63%), Gaps = 9/277 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++ S G + GEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLVLADGSVFHGTSIGYEDSTSGEVVFNTSMTGYQEILTDPSYCKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEESR + AGL+IR L + SN+R +E+L +YL + I D+DTR +T LR+
Sbjct: 65 TNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYLVRNKTVAIADIDTRRLTTLLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH- 185
G+ G + T + ++ E+ ++ +VG DL +VS E +EW E +W
Sbjct: 125 KGAQGGAILTGADATVEKARELIAAFGSMVGKDLAKEVSCTEVYEWTEG---EWALGKGF 181
Query: 186 -ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR LA+ GC++ VVP+ A + L L PDGV SNGPGD
Sbjct: 182 VTPAEQPFHVVAYDFGVKTNILRMLAARGCRLTVVPAQTSAEDVLALNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
P YA+ V++L+ GK P+FGIC+GHQL+ A+G
Sbjct: 242 PEPCTYAIEAVQKLMASGK-PIFGICLGHQLISLAIG 277
>gi|116070434|ref|ZP_01467703.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp.
BL107]
gi|116065839|gb|EAU71596.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp.
BL107]
Length = 398
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 179/275 (65%), Gaps = 4/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG++ FG GT VGEVVF T +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 24 AHLVLADGTVLSGIGFGHRGTAVGEVVFTTGMTGYQEVLTDPSYEGQLVTFTYPELGNTG 83
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+E+ G++ R L+ SNWR +L +++ + ++GI VDTRA+ R LR
Sbjct: 84 VNADDQEADSPHARGVIARQLAPNFSNWRGQASLESWMDDHQLVGICGVDTRALVRHLRD 143
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIV-GIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G++ GV+ + + +S LLE R+ ++ G++L S VS KE + W ++ + D+D H
Sbjct: 144 CGAMNGVICS-DGRSPAALLEELRAAPLMEGLNLASRVSTKESYRWTKACRVDFDQRLHN 202
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
++ + V+A DFGIK IL RL ++GC++ V+P+ + +PDGV SNGPGDP+
Sbjct: 203 NPNRPFHVVAIDFGIKRAILDRLVAHGCELTVLPANSDVATVRSHQPDGVFLSNGPGDPA 262
Query: 247 AVPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
AV +A+ K+LL + +PVFGIC+GHQ+LG ALG
Sbjct: 263 AVTQGIALAKDLLQEENLPVFGICLGHQILGLALG 297
>gi|375135746|ref|YP_004996396.1| carbamoyl-phosphate synthase, small chain [Acinetobacter
calcoaceticus PHEA-2]
gi|325123191|gb|ADY82714.1| carbamoyl-phosphate synthase, small chain [Acinetobacter
calcoaceticus PHEA-2]
Length = 394
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 178/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GA+G+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 20 AILALADGTIFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 79
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL E N++ I D+DTR +TR
Sbjct: 80 CNAEDVESGRIHKVWANGLIIRDLPLLHSNFRAEQSLSEYLQEHNVVAIADIDTRKLTRI 139
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E + +R++ + G+DL + FEW E + W
Sbjct: 140 LRDKGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPTGFEWSEGS---WTLG 196
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 197 QGFSQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAETPAEKVLALNPDGVFLSNGP 256
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 257 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 295
>gi|187477422|ref|YP_785446.1| carbamoyl phosphate synthase small subunit, partial [Bordetella
avium 197N]
gi|115422008|emb|CAJ48530.1| carbamoyl-phosphate synthase small chain [Bordetella avium 197N]
Length = 384
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 175/276 (63%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R S GA G V EVVFNT++TGYQEILTDPSY GQ V +T PHIGNTG
Sbjct: 16 AILALADGTIFRGVSIGAPGHTVAEVVFNTAMTGYQEILTDPSYNGQIVTLTYPHIGNTG 75
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + + +GLV+R SN+R ++L YL E+ ++ I +DTR +TR LR
Sbjct: 76 VNTEDVEANRVYASGLVVRDCPARVSNFRSTQSLPEYLTEQGVVAIAGIDTRKLTRILRD 135
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E + +E++RS+ + G DL VS KE W + T W+
Sbjct: 136 KGAQGGCIFVGEDA--ERAVELARSFPGMAGQDLARVVSQKETTTWTQGT---WELGQGY 190
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + V+AYDFG+K NILR +A GC+I +VP+ PA + LKL PDGV +NGPGD
Sbjct: 191 GQPEQDRFHVVAYDFGVKQNILRLMADRGCRITLVPAQTPAEDVLKLNPDGVFLANGPGD 250
Query: 245 PSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
P YA+A + L K+PVFGIC+GHQ++G A+G
Sbjct: 251 PEPCDYAIAAARVFLERKLPVFGICLGHQIMGLAVG 286
>gi|91784543|ref|YP_559749.1| carbamoyl phosphate synthase small subunit [Burkholderia xenovorans
LB400]
gi|91688497|gb|ABE31697.1| carbamoyl-phosphate synthase small subunit [Burkholderia xenovorans
LB400]
Length = 391
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 15 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 74
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 75 VNAEDVEAAKVHAAGLIIRDLPVLASNFRMERTLQQYLQDEGVVAIAGLDTRMLTRVLRD 134
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + S + +E++RS+ + G+DL VS KE +EW T+ +W +
Sbjct: 135 KGAQNGAI-LAGSDDEARAIELARSFPGLSGMDLAKVVSTKESYEW---TQTEWRLGSGY 190
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+N+ YRV+A+D+G+K+NILR LA GC + V+P+ A++ L L PDGV SNGPGD
Sbjct: 191 GTQNAPKYRVVAFDYGVKYNILRMLAERGCHVTVLPAEASAADALALNPDGVFLSNGPGD 250
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ KEL+ + +P FGIC+GHQ++G A+G
Sbjct: 251 PEPCDYAIRATKELIDRGIPTFGICLGHQIMGLAVG 286
>gi|78184880|ref|YP_377315.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
CC9902]
gi|78169174|gb|ABB26271.1| carbamoyl-phosphate synthase small subunit [Synechococcus sp.
CC9902]
Length = 398
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/274 (44%), Positives = 174/274 (63%), Gaps = 2/274 (0%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG++ FG GT VGEVVFNT +TGYQE+LTDPSY GQ V T P +GNTG
Sbjct: 24 AHLVLADGTVLSGVGFGHRGTAVGEVVFNTGMTGYQEVLTDPSYEGQLVTFTYPELGNTG 83
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DD+E+ G++ R L+ SNWR ++L +++ ++GI VDTRA+ R LR
Sbjct: 84 VNADDQEADSPHARGVIARQLAPKFSNWRSQDSLESWMDAHQLVGICGVDTRALVRHLRD 143
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ GV+ ++ L E+ + + G++L S VS KE + W + + D+D H
Sbjct: 144 CGAMNGVICSDGRSPAALLEELRTAPSMEGLNLASRVSTKESYRWTNACRVDFDQRLHNN 203
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
S+ + V+A DFGIK IL RL ++GC++ V+P + +PDGV SNGPGDP+A
Sbjct: 204 PSRPFHVVAIDFGIKRAILDRLVAHGCEVTVLPVDSDLTTVRSHQPDGVFLSNGPGDPAA 263
Query: 248 VPYAVAIVKELLGK--VPVFGICMGHQLLGQALG 279
V +A+ K+LL + +P+FGIC+GHQ+LG ALG
Sbjct: 264 VTQGIALAKDLLQEQNLPLFGICLGHQILGLALG 297
>gi|377555443|ref|ZP_09785171.1| carbamoyl-phosphate synthase small subunit [endosymbiont of
Bathymodiolus sp.]
Length = 373
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 173/276 (62%), Gaps = 7/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I++ KS GA+G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGNTG
Sbjct: 5 ALLALEDGQIFKGKSMGANGNTVGEVVFNTSMTGYQEILTDPSYTKQIVALTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N DEES + + +GL+IR L + SNWR L YL+ NI+ I D+DTRA+TR LR+
Sbjct: 65 TNLVDEESGKIYASGLIIRDLPLLHSNWRSEMPLDEYLSANNIVAISDIDTRALTRHLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G + T E + + ++++ + +DL VS + + + E + + E
Sbjct: 125 KGALKGCIITGEDADEATAVAKAQAFAGLQNMDLAKVVSTTKQYTFNEGS---YSLEKGE 181
Query: 187 RN--SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
N ++V+ YD+G+K NILR L GC + VV + P + L + PDGV SNGPGD
Sbjct: 182 FNPLDAKFKVVVYDYGVKKNILRMLVDRGCDLTVVNAQTPVEDVLAMNPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ ++ LL K +P+FGIC+GHQLL A G
Sbjct: 242 PQPCDYAIKNIQTLLEKNMPMFGICLGHQLLSLANG 277
>gi|313672015|ref|YP_004050126.1| carbamoyl-phosphate synthase small subunit [Calditerrivibrio
nitroreducens DSM 19672]
gi|312938771|gb|ADR17963.1| carbamoyl-phosphate synthase small subunit [Calditerrivibrio
nitroreducens DSM 19672]
Length = 368
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 177/276 (64%), Gaps = 3/276 (1%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
++ A LV EDG ++ +SFGA G GEVVFNTS+TGYQEILTDPSY GQ V MT P IG
Sbjct: 1 MSKAFLVFEDGLVFEGESFGAVGESTGEVVFNTSMTGYQEILTDPSYYGQMVTMTYPLIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G+N +D ES + F++ +++ S SN+R +LG++L + I+GI +DTR + R
Sbjct: 61 NYGINEEDFESIKPFVSAFIVKEYSPIYSNYRATSSLGDFLKKHGIIGIQGIDTRMVVRH 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVEST-KPDWDFN 183
+R+ GS+ V+ST ++ + + IVG DL+ V+ EP+EW+E + + D F
Sbjct: 121 IREAGSMNAVISTIDNDKESLKQKAKNIPSIVGQDLVQYVTCNEPYEWLEGSWQLDGSFY 180
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
++ SK V+A DFGIK NILR L GC++ VVP+ E KLKPDG+ SNGPG
Sbjct: 181 KPKKYSK--HVVALDFGIKRNILRYLVDEGCRVTVVPAKTTFEEIEKLKPDGIFISNGPG 238
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ + YA+ V ++ K P FGIC+G+QLL A G
Sbjct: 239 DPAPLYYAIETVAKVTEKYPSFGICLGNQLLALAYG 274
>gi|452124821|ref|ZP_21937405.1| carbamoyl phosphate synthase small subunit [Bordetella holmesii
F627]
gi|452128218|ref|ZP_21940797.1| carbamoyl phosphate synthase small subunit [Bordetella holmesii
H558]
gi|451924051|gb|EMD74192.1| carbamoyl phosphate synthase small subunit [Bordetella holmesii
F627]
gi|451926433|gb|EMD76569.1| carbamoyl phosphate synthase small subunit [Bordetella holmesii
H558]
Length = 384
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 178/274 (64%), Gaps = 5/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R S GA G V E+VFNTS+TGYQEILTDPSY+GQ V +T PHIGNTG
Sbjct: 16 AILALADGTIFRGVSIGAPGHTVAEMVFNTSMTGYQEILTDPSYSGQIVTLTYPHIGNTG 75
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + + +GLV+R SN+R ++L +YL + ++ I +DTR +TR LR+
Sbjct: 76 VNVEDVEANRVYASGLVVRDCPARVSNFRATQSLPDYLTAQGVVAIAGIDTRKLTRILRE 135
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + E + +E++RS+ + G DL VS K+ W + T + T
Sbjct: 136 KGAQGGCILVGEDA--ERAVELARSFPGMSGQDLAKVVSQKDTTSWTQGTWQLGEGYTQP 193
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+ + V+AYDFG+K+NILR +A GC+I +VP+ PA E LKL PDGV +NGPGDP
Sbjct: 194 AQDR-FHVVAYDFGVKYNILRLIADRGCRITLVPAQTPAEEVLKLNPDGVFLANGPGDPE 252
Query: 247 AVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
YA+A + L K+PVFGIC+GHQ++G A+G
Sbjct: 253 PCDYAIAATRVFLERKLPVFGICLGHQIMGLAVG 286
>gi|389549052|gb|AFK83716.1| CspS [uncultured organism]
Length = 373
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 173/273 (63%), Gaps = 13/273 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG ++R +S+ A G VGE+VFNTS+TGYQE+LTDPSYAGQ V MT P IGN G
Sbjct: 7 ALLALEDGRVFRGRSWAAEGESVGEMVFNTSMTGYQEVLTDPSYAGQIVCMTYPLIGNYG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN DDEES + ++ G V+R S S+WR ETL YL I+ I +DTRA+ R +R
Sbjct: 67 VNSDDEESFRPWVEGFVVREASRMASSWRAQETLAAYLKRWQIVAIEGIDTRALVRHIRD 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ LST + + + +S + +L S V+ KEP+
Sbjct: 127 KGAMRACLSTVDLVEANVVDKARQSPSMENRELASVVTTKEPYV------------VPAE 174
Query: 188 NSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSA 247
++ + V+ +DFG+K N LR LA+ GC+I V+P+ PASE + LKPDGV SNGPGDP++
Sbjct: 175 GAERFHVVCFDFGVKRNSLRSLAALGCRITVMPAATPASEVIALKPDGVFLSNGPGDPAS 234
Query: 248 VPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
+ VA +KELLG +P FGIC GHQLLG+A G
Sbjct: 235 MNREVAQIKELLGASLPTFGICFGHQLLGRAFG 267
>gi|320107213|ref|YP_004182803.1| carbamoyl-phosphate synthase small subunit [Terriglobus saanensis
SP1PR4]
gi|319925734|gb|ADV82809.1| carbamoyl-phosphate synthase, small subunit [Terriglobus saanensis
SP1PR4]
Length = 378
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 131/277 (47%), Positives = 168/277 (60%), Gaps = 5/277 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG I+R K FGA + GEVVFNT+LTGYQEI TDPSYAGQ V++TNP IGN G
Sbjct: 3 AILALEDGRIFRGKGFGAPAERSGEVVFNTALTGYQEIFTDPSYAGQIVVLTNPQIGNYG 62
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+ D ES + ++ GLV R S +SNWR E YL + I D+DTRA+ R LR
Sbjct: 63 TSPLDSESVRPYIEGLVTREFSPISSNWRSTEVADEYLERTGVPVITDIDTRALVRHLRN 122
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEW-----VESTKPDWDF 182
G + GVLST + + + + G DL S VS KE + + T +
Sbjct: 123 FGVMRGVLSTISTDEAALVAKAKSIRKMDGTDLASIVSTKEKYTFDSNDAKNETGDKFLP 182
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
++ + K V+AYDFGIK NILR LA C + VVP+ A++ L + PDG+ FSNGP
Sbjct: 183 DSISTDGKKMHVVAYDFGIKQNILRMLARENCTVTVVPAKTSAADVLAMNPDGIFFSNGP 242
Query: 243 GDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
GDP + YA +++L GK P+FGIC+GHQL G ALG
Sbjct: 243 GDPEPLDYAQQNIRDLAGKAPMFGICLGHQLFGLALG 279
>gi|415814049|ref|ZP_11505712.1| carbamoyl-phosphate synthase small chain [Escherichia coli LT-68]
gi|323171451|gb|EFZ57098.1| carbamoyl-phosphate synthase small chain [Escherichia coli LT-68]
Length = 376
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 174/277 (62%), Gaps = 10/277 (3%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
+VLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGN G N
Sbjct: 1 MVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTN 60
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR LR+ G
Sbjct: 61 DADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKLHNIVAIADIDTRKLTRLLREKG 120
Query: 130 SLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN----- 183
+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 121 AQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLTGGLPE 177
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+ SNGPG
Sbjct: 178 AKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPG 237
Query: 244 DPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
DP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 238 DPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 274
>gi|312884385|ref|ZP_07744091.1| carbamoyl phosphate synthase small subunit [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309367968|gb|EFP95514.1| carbamoyl phosphate synthase small subunit [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 379
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 172/279 (61%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+ GYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 5 ALLVLEDGTVFHGISIGADGISVGEVVFNTSMMGYQEILTDPSYSKQIVTLTYPHIGNTG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEES GL+IR L + SN+R +L +YL +NI+GI ++DTR +TR LR+
Sbjct: 65 TNNEDEESSLIHAQGLIIRDLPLIASNFRNQLSLSDYLKSQNIVGIAEIDTRKLTRVLRE 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ G + S + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 125 KGAQSGCIVAGHSLDEALALAKAKEFPGLKGMDLAKEVTTKETYQWKQGS---WTLEGGL 181
Query: 187 RNSK-----TYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+K Y V+AYDFG K NILR L GC++ VVP+ P E L L PDG+ SNG
Sbjct: 182 PEAKDDKDLPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPVEEVLALNPDGIFLSNG 241
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L + +P+FGIC+GHQ+L A G
Sbjct: 242 PGDPEPCTYAIEATKTFLQRGIPIFGICLGHQILALASG 280
>gi|271502092|ref|YP_003335118.1| carbamoyl-phosphate synthase small subunit [Dickeya dadantii
Ech586]
gi|270345647|gb|ACZ78412.1| carbamoyl-phosphate synthase, small subunit [Dickeya dadantii
Ech586]
Length = 381
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES GLVIR L + SN+R E+L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNKADEESPAVHAQGLVIRDLPLIASNYRSEESLSDYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ + + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAALALEKAKAFPGLKGMDLAKEVTTRSSYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+KT Y V+AYD+G+K NILR L GC++ VVP+ A + LKL PDG+
Sbjct: 179 GELPAAKTEGELPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTSAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIKAIKAFLETDIPVFGICLGHQLLALASG 280
>gi|261823076|ref|YP_003261182.1| carbamoyl phosphate synthase small subunit [Pectobacterium wasabiae
WPP163]
gi|261607089|gb|ACX89575.1| carbamoyl-phosphate synthase, small subunit [Pectobacterium
wasabiae WPP163]
gi|385873533|gb|AFI92053.1| Carbamoyl-phosphate synthase small chain [Pectobacterium sp.
SCC3193]
Length = 382
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 175/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGLAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +DEES GLVIR L + SN+R E+L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANANDEESPSVQAQGLVIRDLPLIASNYRSEESLSEYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ L ++++ + G+DL +V+ E + W++ + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAVVALAKAKAFPGLKGMDLAKEVTTAESYSWLQGS---WTLE 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K Y V+AYD+G+K NILR L GC++ VVP+ PA + LKL PDG+
Sbjct: 179 GELPAAKNESDLPYHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+ +K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIRAIKTFLETDIPVFGICLGHQLLALASG 280
>gi|148652643|ref|YP_001279736.1| carbamoyl phosphate synthase small subunit [Psychrobacter sp.
PRwf-1]
gi|148571727|gb|ABQ93786.1| carbamoyl-phosphate synthase small subunit [Psychrobacter sp.
PRwf-1]
Length = 418
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/306 (44%), Positives = 184/306 (60%), Gaps = 30/306 (9%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N A L L DG+I+R S GA+G++VGEVVFNTS+TGYQEILTDPSYA Q V +T PHI
Sbjct: 13 NEVEAILALADGNIFRGISIGAAGSRVGEVVFNTSMTGYQEILTDPSYAKQIVTLTYPHI 72
Query: 64 GNTGVNFDDEES------RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVD 117
GNTG N +D ES Q + GL+IR ++ TSN+R +E+L +YL + + I ++D
Sbjct: 73 GNTGTNVEDAESGNIYQNNQVWAEGLIIRDATMTTSNFRNSESLSDYLQRQQTVAIAEID 132
Query: 118 TRAITRRLRQDGSLIGVLSTEE-----SKSD-QELLEMSRSWD-IVGIDLISDVSGKEPF 170
TR +TR LR G+ G + T S+ D Q+ +E+++ W+ + G+DL + E F
Sbjct: 133 TRKLTRILRDKGAQNGCIMTASNGATISEEDIQKAIEIAQQWEGLEGMDLAKECCNPEGF 192
Query: 171 EWVESTKPDWDFNTH---------------ERNSKTYRVIAYDFGIKHNILRRLASYGCQ 215
EW E T D H E Y V+AYDFG K NILR L GC+
Sbjct: 193 EWTEGTWELADRGVHGVTESQTGGYYKKLGEHIDHQYDVVAYDFGTKTNILRMLVDLGCK 252
Query: 216 IIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVPYAVAIVKELLGK--VPVFGICMGHQL 273
+ VVP+ P ++ L PDG+ SNGPGDP+A YA+ V+ ++ + +P FGIC+GHQL
Sbjct: 253 VNVVPAQTPIADVLAQNPDGIFLSNGPGDPAACDYAIDAVRHIIEETDIPTFGICLGHQL 312
Query: 274 LGQALG 279
+G A G
Sbjct: 313 VGLASG 318
>gi|6730117|pdb|1C30|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730119|pdb|1C30|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730121|pdb|1C30|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730123|pdb|1C30|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase: Small
Subunit Mutation C269s
gi|6730127|pdb|1C3O|B Chain B, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
gi|6730129|pdb|1C3O|D Chain D, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
gi|6730131|pdb|1C3O|F Chain F, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
gi|6730133|pdb|1C3O|H Chain H, Crystal Structure Of The Carbamoyl Phosphate Synthetase:
Small Subunit Mutant C269s With Bound Glutamine
Length = 382
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGI +GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGISLGHQLLALASG 280
>gi|291287473|ref|YP_003504289.1| carbamoyl-phosphate synthase small subunit [Denitrovibrio
acetiphilus DSM 12809]
gi|290884633|gb|ADD68333.1| carbamoyl-phosphate synthase, small subunit [Denitrovibrio
acetiphilus DSM 12809]
Length = 372
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/275 (45%), Positives = 177/275 (64%), Gaps = 7/275 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++ +SFGA T+ GEVVFNTS++GYQEILTDPSY GQ V MT P IGN+G
Sbjct: 4 AYLVLSDGTVFEGQSFGAEATKTGEVVFNTSMSGYQEILTDPSYYGQMVTMTYPLIGNSG 63
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+N +D ES +L+ +++ S SN+R ++LG++L E+ ++GI +DTR + R +R+
Sbjct: 64 INSEDFESDNVWLSAFIVKEYSQLYSNYRADKSLGDFLKEQGVIGIEGIDTRMLVRHIRE 123
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
GS+ VLSTE D L +M+ + I G D + +V+ K+P+EW + T W
Sbjct: 124 QGSMNAVLSTEIDDIDN-LKKMAAAIPSIEGQDYVKEVTCKKPYEWTQKT---WTIENGY 179
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + ++A DFGIK NILR A C++ VVP+ P SE KL PDGV SNGPGD
Sbjct: 180 TDCTAPKRHIVAIDFGIKKNILRYFADMDCKVTVVPADTPFSEIEKLNPDGVFLSNGPGD 239
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P + Y + + +L K P FGIC+G+Q+LG ALG
Sbjct: 240 PEPIVYGIETARMVLEKYPTFGICLGNQILGLALG 274
>gi|254229694|ref|ZP_04923104.1| carbamoyl-phosphate synthase, small subunit [Vibrio sp. Ex25]
gi|151937815|gb|EDN56663.1| carbamoyl-phosphate synthase, small subunit [Vibrio sp. Ex25]
Length = 411
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 173/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG+++ S GA G VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 37 ALLVLEDGTVFHGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTG 96
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+DEES GLVIR L + SN+R ++L +YL +NI+GI D+DTR +TR LR+
Sbjct: 97 TTSEDEESSSIHAQGLVIRDLPLIASNFRNEQSLSDYLKSQNIVGIADIDTRKLTRILRE 156
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF---- 182
G+ G + + + L ++ + + G+DL +V+ KE ++W + + W
Sbjct: 157 KGAQNGCIFAGNNLDEALALAKAKEFPGLKGMDLAKEVTTKEAYQWKQGS---WTLEGGL 213
Query: 183 -NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+AYDFG K NILR L GC++ VVP+ A E L + PDGV SNG
Sbjct: 214 PEAKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAETSAEEVLAMNPDGVFLSNG 273
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ K L K +P+FGIC+GHQ+L A G
Sbjct: 274 PGDPEPCTYAIEATKVFLEKGLPIFGICLGHQILALASG 312
>gi|167630178|ref|YP_001680677.1| carbamoyl-phosphate synthase small subunit [Heliobacterium
modesticaldum Ice1]
gi|167592918|gb|ABZ84666.1| carbamoyl-phosphate synthase, small subunit [Heliobacterium
modesticaldum Ice1]
Length = 361
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 172/270 (63%), Gaps = 15/270 (5%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
L+LEDGS+W ++FGA G + GEVVFNT +TGYQE+LTDPSY GQ V+MT P IGN G+N
Sbjct: 6 LILEDGSVWEGQAFGARGQRPGEVVFNTGMTGYQELLTDPSYCGQIVVMTYPLIGNYGIN 65
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D ESRQ FL G ++R + SNWR +T+ YL + ++G+ VDTRA+TRRLR G
Sbjct: 66 EEDFESRQPFLRGFIVREWAEIPSNWRSRDTINGYLKQAGVIGLAGVDTRALTRRLRSHG 125
Query: 130 SLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNS 189
++ G+++T + + + ++ I G L+ +V+ KE +
Sbjct: 126 TMRGIIATGDVDRVALVQQAQQAPHISGQPLVDEVTVKE---------------RSVMEN 170
Query: 190 KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 249
+ V D+G K NI R L GC++ ++P+ A+E L L PDG++ SNGPGDP VP
Sbjct: 171 DGFHVALLDYGAKDNIARSLHLRGCKVTILPARTTAAEVLALNPDGIMLSNGPGDPRDVP 230
Query: 250 YAVAIVKELLGKVPVFGICMGHQLLGQALG 279
YAV VK LLGK PVFGIC+GHQ++G A+G
Sbjct: 231 YAVEAVKALLGKKPVFGICLGHQIIGLAVG 260
>gi|291279412|ref|YP_003496247.1| carbamoylphosphate synthase small subunit [Deferribacter
desulfuricans SSM1]
gi|290754114|dbj|BAI80491.1| carbamoylphosphate synthase, small subunit [Deferribacter
desulfuricans SSM1]
Length = 372
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 172/274 (62%), Gaps = 5/274 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVLEDG++++ SFGA+G GEVVFNTS+TGYQEILTDPSY GQ V MT P IGN G
Sbjct: 4 AYLVLEDGTVFKGASFGANGEVEGEVVFNTSMTGYQEILTDPSYYGQMVCMTYPLIGNYG 63
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + ++ +++ S SN+R +L N+L + NI+GI +DTR + R +R+
Sbjct: 64 VNEEDFESNRPYVTAFIVKEYSKTYSNYRATTSLSNFLKKYNIIGIEGIDTRKLVRHIRE 123
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
GS+ ++STE D + IVG DL+ VS K+P+EW T+ W
Sbjct: 124 RGSMNAIISTETGDIDYLKEKAKNIPSIVGKDLVQYVSTKKPYEW---TQGSWILGKGYY 180
Query: 188 NSKTY--RVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+++ ++A DFGIK NILR GC++ VVP+ + KL PDG+ SNGPGDP
Sbjct: 181 TPESFDLHIVAIDFGIKRNILRYFVDNGCKVTVVPANTKFEDIEKLNPDGIFLSNGPGDP 240
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+ Y + I K+ + K PVFGIC+G+Q+L ALG
Sbjct: 241 EPISYGIDIAKKAVEKYPVFGICLGNQILSIALG 274
>gi|113868422|ref|YP_726911.1| carbamoyl phosphate synthase small subunit [Ralstonia eutropha H16]
gi|113527198|emb|CAJ93543.1| carbamoylphosphate synthase small subunit [Ralstonia eutropha H16]
Length = 378
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 184/277 (66%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++R S GASG +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 7 SAILALADGTVFRGYSIGASGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNY 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I+ L I SN+R TL +YL + ++ I +DTR +TR LR
Sbjct: 67 GVNPEDVEATKVHAAGLIIKDLPILASNFRKEHTLAHYLKQEKVVAIAGIDTRKLTRILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + E Q+ ++++RS+ + G+DL VS KEP+EW +S +W
Sbjct: 127 EKGAQNGCILAGEDNV-QKAIDLARSFPGLAGMDLAKVVSVKEPYEWTQS---EWKLGEG 182
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+++ + V+AYD+G+K+NILR LA GC++ V+P+ A++ L L PDGV SNGPG
Sbjct: 183 YGKQDQPQFHVVAYDYGVKYNILRMLAERGCKVTVLPAQASAADALALNPDGVFLSNGPG 242
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+A +E + + +P FGIC+GHQ++ A+G
Sbjct: 243 DPEPCDYAIAATREFIERGIPTFGICLGHQIMALAVG 279
>gi|304396526|ref|ZP_07378407.1| carbamoyl-phosphate synthase, small subunit [Pantoea sp. aB]
gi|304356035|gb|EFM20401.1| carbamoyl-phosphate synthase, small subunit [Pantoea sp. aB]
Length = 382
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANAADEESSQIHAQGLVIRDLPLIASNFRSEEGLSAYLQRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ L+ ++++ + G+DL +V E + W + + W +
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALQKAQAFPGLKGMDLAKEVCTTETYSWQQGS---WTLD 178
Query: 184 T-----HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
S Y V+AYD+G K NILR L GC++ VVP+ PA E LKL PDG+
Sbjct: 179 AGLPEQAAAESLPYHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ +++ L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAISAIQDFLKTDIPVFGICLGHQLLALASG 280
>gi|86158045|ref|YP_464830.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774556|gb|ABC81393.1| carbamoyl-phosphate synthase small subunit [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 373
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 171/275 (62%), Gaps = 4/275 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG+ + S GA+G GEVVFNTS+TGYQEILTDPSY Q + MT P GN
Sbjct: 3 QAILALADGTTFEGFSLGATGEATGEVVFNTSMTGYQEILTDPSYVDQMICMTYPEQGNY 62
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DEES + G ++R + SN+R ++L YLA I+GI +DTR +TR +R
Sbjct: 63 GVNRADEESARPHATGFIVRHAAEQPSNFRAEQSLHGYLAAHGIVGITGIDTRRLTRHIR 122
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDW-DFNT 184
G+ +GV++TE S L+E +R+ + G DL + +S P+EW E W D
Sbjct: 123 TAGAQMGVIATEGSAG--ALVERARALPGMEGQDLATRISTAAPYEWTEQGADCWTDAER 180
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ V+AYD+G+K +LR LA GC++ VVPS A+E L L+PDGV +NGPGD
Sbjct: 181 APLAKPRFHVVAYDWGLKRAMLRLLAEAGCRVTVVPSRTSAAEALALRPDGVFLTNGPGD 240
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P+AV A V LLGKVPVFGIC+GHQ+L A+G
Sbjct: 241 PAAVTGARETVAALLGKVPVFGICLGHQILALAIG 275
>gi|365104001|ref|ZP_09333662.1| carbamoyl-phosphate synthase small chain [Citrobacter freundii
4_7_47CFAA]
gi|363644614|gb|EHL83895.1| carbamoyl-phosphate synthase small chain [Citrobacter freundii
4_7_47CFAA]
Length = 382
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADAESSQVHAQGLVIRDLPLIASNFRDTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKAKAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K+ + V+AYDFG K NILR LA GC++ VVP+ A + LK+ PDG+
Sbjct: 179 GDLPEAKSADEMPFHVVAYDFGAKRNILRMLADRGCRLTVVPAKTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|395229211|ref|ZP_10407527.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. A1]
gi|421844660|ref|ZP_16277817.1| carbamoyl phosphate synthase small subunit [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|424729310|ref|ZP_18157912.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. L17]
gi|394717264|gb|EJF22962.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. A1]
gi|411774139|gb|EKS57649.1| carbamoyl phosphate synthase small subunit [Citrobacter freundii
ATCC 8090 = MTCC 1658]
gi|422896034|gb|EKU35820.1| carbamoyl-phosphate synthase small chain [Citrobacter sp. L17]
gi|455643634|gb|EMF22758.1| carbamoyl phosphate synthase small subunit [Citrobacter freundii
GTC 09479]
Length = 382
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADAESSQVHAQGLVIRDLPLIASNFRDTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKAKAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K+ + V+AYDFG K NILR LA GC++ VVP+ A + LK+ PDG+
Sbjct: 179 GDLPEAKSADELPFHVVAYDFGAKRNILRMLADRGCRLTVVPAKTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 280
>gi|237729328|ref|ZP_04559809.1| carbamoyl phosphate synthase small subunit [Citrobacter sp. 30_2]
gi|226909057|gb|EEH94975.1| carbamoyl phosphate synthase small subunit [Citrobacter sp. 30_2]
Length = 391
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADAESSQVHAQGLVIRDLPLIASNFRDTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ EP+ W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKAKAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLA 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K+ + V+AYDFG K NILR LA GC++ VVP+ A + LK+ PDG+
Sbjct: 188 GDLPEAKSADEMPFHVVAYDFGAKRNILRMLADRGCRLTVVPAKTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|3891748|pdb|1A9X|B Chain B, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
gi|3891750|pdb|1A9X|D Chain D, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
gi|3891752|pdb|1A9X|F Chain F, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
gi|3891754|pdb|1A9X|H Chain H, Carbamoyl Phosphate Synthetase: Caught In The Act Of
Glutamine Hydrolysis
Length = 379
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 1 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 61 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 121 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 177
Query: 183 ----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 178 GGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 237
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGI +GHQLL A G
Sbjct: 238 SNGPGDPAPCDYAITAIQKFLETDIPVFGIXLGHQLLALASG 279
>gi|6730188|pdb|1CS0|B Chain B, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|6730190|pdb|1CS0|D Chain D, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|6730192|pdb|1CS0|F Chain F, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|6730194|pdb|1CS0|H Chain H, Crystal Structure Of Carbamoyl Phosphate Synthetase
Complexed At Cys269 In The Small Subunit With The
Tetrahedral Mimic L-glutamate Gamma-semialdehyde
gi|18158904|pdb|1KEE|B Chain B, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
gi|18158906|pdb|1KEE|D Chain D, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
gi|18158908|pdb|1KEE|F Chain F, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
gi|18158910|pdb|1KEE|H Chain H, Inactivation Of The Amidotransferase Activity Of Carbamoyl
Phosphate Synthetase By The Antibiotic Acivicin
Length = 382
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE +R++ + G+DL +V+ E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGS---WTLT 178
Query: 184 -----THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ + + V+AYDFG K NILR L GC++ +VP+ A + LK+ PDG+
Sbjct: 179 GGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGI +GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPVFGIXLGHQLLALASG 280
>gi|291086108|ref|ZP_06354835.2| carbamoyl-phosphate synthase, small subunit [Citrobacter youngae
ATCC 29220]
gi|291069391|gb|EFE07500.1| carbamoyl-phosphate synthase, small subunit [Citrobacter youngae
ATCC 29220]
Length = 391
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 11 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 71 NVGTNEADAESSQVHAQGLVIRDLPLIASNFRDTEDLSSYLKRHNIVAIADIDTRKLTRL 130
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ EP+ W + + W
Sbjct: 131 LREKGAQNGCIIAGDNPDAALALEKAKAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLA 187
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K+ + V+AYDFG K NILR LA GC++ VVP+ A + LK+ PDG+
Sbjct: 188 GDLPEAKSADELPFHVVAYDFGAKRNILRMLADRGCRLTVVPAKTSAEDVLKMNPDGIFL 247
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +PVFGIC+GHQLL A G
Sbjct: 248 SNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASG 289
>gi|435853651|ref|YP_007314970.1| carbamoyl-phosphate synthase, small subunit [Halobacteroides
halobius DSM 5150]
gi|433670062|gb|AGB40877.1| carbamoyl-phosphate synthase, small subunit [Halobacteroides
halobius DSM 5150]
Length = 357
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 172/275 (62%), Gaps = 13/275 (4%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A+LVLEDG+I+ +SFGA+ GE+VFNTS+TGYQEILTD SY G+ V MT P IG
Sbjct: 1 MQQAKLVLEDGTIFTGQSFGAARETSGEIVFNTSMTGYQEILTDASYKGEIVTMTYPLIG 60
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N +D ES + G +++ SNWR E L NYL E I+ I VDTRA+T++
Sbjct: 61 NYGTNEEDIESYTSHVNGFIVKEFCQEPSNWRYQEKLANYLKEHGIVAISGVDTRALTKK 120
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
LR +G++ G+++ + ++ + + + G DL+ +V+ D +N
Sbjct: 121 LRTEGTMKGIITVTDKAENKLVTAAKEAPGLSGRDLVGEVT------------TDEIYNQ 168
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
E N K Y+V+ D G K NI+R L GC++IVVP+T A + L PDGV+ SNGPGD
Sbjct: 169 GEEN-KEYQVVLVDCGAKKNIVRSLVGRGCEVIVVPATTSAEKILSYNPDGVMISNGPGD 227
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P V Y V VKELLG+VP+FGIC+GHQ++G A G
Sbjct: 228 PQDVFYVVETVKELLGEVPIFGICLGHQIIGLACG 262
>gi|405375681|ref|ZP_11029707.1| Carbamoyl-phosphate synthase small chain [Chondromyces apiculatus
DSM 436]
gi|397086045|gb|EJJ17189.1| Carbamoyl-phosphate synthase small chain [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 375
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 176/276 (63%), Gaps = 6/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++ ++FGA G VGEVVFNTSL GYQE+LTDPSY GQ V M+ P +GN G
Sbjct: 6 AVLALADGTLFEGRAFGAVGETVGEVVFNTSLYGYQEVLTDPSYVGQIVTMSYPEMGNVG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +DEE + G+V+R+LS SNWR E+L YL + GI +DTR + R LR+
Sbjct: 66 ANPEDEEGSRVHAVGMVVRALSEQPSNWRAKESLDAYLKRSGVAGIEGIDTRRLVRHLRE 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+ +GV+S+ E S L+E +R+ + G+DL + VS KE + + + + PD E
Sbjct: 126 HGAQMGVISS-EGLSPTALVERARTARGMEGLDLATGVSTKEAYTFTQPS-PDVFTGVGE 183
Query: 187 RNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + V+AYD+G+K ++L L GC++ VVP+T A E L KP GV +NGPG
Sbjct: 184 VQAPVEPRFDVVAYDYGLKKSMLHFLVDVGCRVTVVPATTTAEEVLARKPHGVFLANGPG 243
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP+AV A V LLGKVPVFGIC+GHQ++ ALG
Sbjct: 244 DPAAVKGADRTVAALLGKVPVFGICLGHQIMALALG 279
>gi|220917428|ref|YP_002492732.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955282|gb|ACL65666.1| carbamoyl-phosphate synthase, small subunit [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 373
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/275 (47%), Positives = 171/275 (62%), Gaps = 4/275 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG+ + S GA+G GEVVFNTS+TGYQEILTDPSY Q + MT P GN
Sbjct: 3 QAILALADGTTFEGFSLGATGEATGEVVFNTSMTGYQEILTDPSYVDQMICMTYPEQGNY 62
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN DEES + G ++R + SN+R +L YLA I+GI +DTR +TR +R
Sbjct: 63 GVNRADEESARPHATGFIVRHATEQPSNFRAERSLHAYLAAHGIVGISGIDTRRLTRHIR 122
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDW-DFNT 184
G+ +GV++TE S + L+E +R+ + G DL + +S P+EW E W D
Sbjct: 123 TAGAQMGVIATEGSA--KALVERARALPGMEGQDLATRISTAAPYEWTEQGADCWTDAER 180
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ V+AYD+G+K +LR LA GC++ VVPS A+E L L+PDGV +NGPGD
Sbjct: 181 APLGRPRFHVVAYDWGLKRAMLRLLAEAGCRVTVVPSRTSAAEALALRPDGVFLTNGPGD 240
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P+AV A V LLGKVPVFGIC+GHQ+L A+G
Sbjct: 241 PAAVAGARETVAALLGKVPVFGICLGHQILALAIG 275
>gi|244539129|dbj|BAH83172.1| carbamoyl-phosphate synthase small subunit [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 410
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 178/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ A LVLEDGS + +S G +G VGEVVFNTS+TGYQEI+TDPSY Q V +T PHIG
Sbjct: 25 IKEALLVLEDGSQFSGRSVGITGLVVGEVVFNTSITGYQEIITDPSYYRQIVTLTYPHIG 84
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G+N DEES + + GLVIR LS+ SN+R E +YL + + I D+DTR +TR
Sbjct: 85 NVGINSLDEESTKIYAQGLVIRDLSLIGSNFRSEEDFDHYLQRNHTVAITDIDTRQLTRL 144
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LRQ G G + ++ + ++ +R++ + G+DL +V +P++W +S+ W
Sbjct: 145 LRQKGIQKGCIIAGDNPDAKLAIKETRNFLGLKGMDLAKEVCTSQPYKWRKSS---WRLH 201
Query: 183 -NTHERNSKT---YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
N+ E+ K Y V+AYD+GIK NIL L GC + VVP+ ASE LK+ PDG+
Sbjct: 202 SNSLEKRKKEELPYNVVAYDYGIKRNILCMLVDRGCSLTVVPAQTSASEVLKMNPDGIFL 261
Query: 239 SNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP + YA+ +K L +P+FGIC+GHQLL A G
Sbjct: 262 SNGPGDPESCHYAIKAIKTFLKTDIPIFGICLGHQLLALASG 303
>gi|308185622|ref|YP_003929753.1| carbamoyl-phosphate synthase small subunit [Pantoea vagans C9-1]
gi|308056132|gb|ADO08304.1| carbamoyl-phosphate synthase small chain [Pantoea vagans C9-1]
Length = 382
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSAILVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGANAADEESSQIHAQGLVIRDLPLIASNFRSEEGLSAYLQRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ L+ ++++ + G+DL +V E + W + + W +
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALQKAQAFPGLKGMDLAKEVCTTETYSWQQGS---WTLD 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
T Y V+AYD+G K NILR L GC++ VVP+ PA E LKL PDG+
Sbjct: 179 AGLPEQATAESLPYHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ ++ L ++PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAISAIQAFLKTEIPVFGICLGHQLLALASG 280
>gi|334340888|ref|YP_004545868.1| carbamoyl-phosphate synthase small subunit [Desulfotomaculum
ruminis DSM 2154]
gi|334092242|gb|AEG60582.1| carbamoyl-phosphate synthase, small subunit [Desulfotomaculum
ruminis DSM 2154]
Length = 371
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 177/273 (64%), Gaps = 15/273 (5%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
ARLVLEDG+I+ ++FGA+G Q GEVVFNT +TGYQE+LTDPSY GQ V+MT P IGN
Sbjct: 2 QARLVLEDGTIFSGRAFGATGEQWGEVVFNTGMTGYQEVLTDPSYCGQIVVMTYPLIGNY 61
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D E++ F+ G V++ SNWR + + +LA ++GI +DTRA+TR++R
Sbjct: 62 GINKEDFEAKSSFVRGFVVKEECDRPSNWRVSNKIDEFLAREGVIGIAGIDTRALTRKIR 121
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHE 186
G+L G++STE S + + + I G +L+ V+ +E + T P
Sbjct: 122 SHGTLRGIISTEVSDPAELVAKAKNCPQISGQELVPTVATREIY-----TVP-------- 168
Query: 187 RNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPS 246
+RV+ DFG K NI+R L + C+++VVP A E L L+P G++ SNGPGDP+
Sbjct: 169 --GNGHRVVLMDFGAKANIVRCLNNRDCEVVVVPPDTAAEEILALQPKGIMLSNGPGDPT 226
Query: 247 AVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
VP AV V+ L+G++P+FGIC+GHQ++G A+G
Sbjct: 227 DVPKAVETVRRLIGQLPIFGICLGHQIIGLAMG 259
>gi|91775131|ref|YP_544887.1| carbamoyl-phosphate synthase small subunit [Methylobacillus
flagellatus KT]
gi|91709118|gb|ABE49046.1| carbamoyl-phosphate synthase small subunit [Methylobacillus
flagellatus KT]
Length = 376
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 177/276 (64%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++R S GA G VGEVVFNTS+TGYQEILTDPSY Q V +T PHIGN G
Sbjct: 6 AVLVLADGTVFRGISIGALGETVGEVVFNTSITGYQEILTDPSYTKQIVTLTYPHIGNVG 65
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + + +GLVIR L + +S+WR ++L YL E N++ I D+DTR +TR LR+
Sbjct: 66 VNAEDVESGRVYASGLVIRDLPLLSSSWRSEKSLSEYLVENNVVAIADIDTRKLTRILRE 125
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E + LE++RS+ + G+DL VS K+ + +W +
Sbjct: 126 KGAQAGCIIAGEV-DEARALELARSFPGLAGMDLAKVVSRKDAGTFALG---EWKLGSGY 181
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
++ + V+A+D+G+KHNILR L GC++ ++P+ A E L L+PDGV SNGPGD
Sbjct: 182 AAQDQARFHVVAFDYGVKHNILRMLVERGCKVTILPAQATAEEALALRPDGVFLSNGPGD 241
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ + ++ +PVFGIC+GHQLL A G
Sbjct: 242 PEPCDYAIKAISNVVDSGIPVFGICLGHQLLALASG 277
>gi|51246947|ref|YP_066831.1| carbamoyl phosphate synthase small subunit [Desulfotalea
psychrophila LSv54]
gi|50877984|emb|CAG37824.1| probable carbamoyl-phosphate synthase, small subunit [Desulfotalea
psychrophila LSv54]
Length = 384
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/280 (43%), Positives = 179/280 (63%), Gaps = 6/280 (2%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
V A + LEDG+I+ KSF G +GE+VFNTS++GYQEILTDPSY GQ V MT P IG
Sbjct: 9 VMKAIIALEDGTIFEGKSFTGRGEAIGEIVFNTSMSGYQEILTDPSYTGQIVTMTYPMIG 68
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G+N +D ES +++ + SN+R + L +L ++G+ DTRA+ R
Sbjct: 69 NYGINPEDMESSSVHPKAFLVKEYNAFPSNYRSTQPLAQFLETYGVLGVEGFDTRALVRH 128
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTK-PDWDF 182
+R+ G++ G++STE+ L++ ++ W +VG +++ VS ++P+ W ++ +F
Sbjct: 129 IRKAGAMKGIVSTEDL-DHASLVKKAQEWTGLVGQNMVERVSCEKPYGWADNMPLSGSNF 187
Query: 183 NT---HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
+T + N K ++V+A+DFGIK+N LR LA GCQ+ VVP+T A L + PDG+ S
Sbjct: 188 STAKSADNNEKAFKVVAFDFGIKYNQLRILAEKGCQVQVVPATTSAQAVLDMNPDGIFLS 247
Query: 240 NGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
NGPGDP V V ++ELLGK P+FGIC+GHQ+LG A G
Sbjct: 248 NGPGDPEGVEGVVDTIRELLGKKPIFGICLGHQILGLAYG 287
>gi|372275965|ref|ZP_09512001.1| carbamoyl phosphate synthase small subunit [Pantoea sp. SL1_M5]
gi|390436793|ref|ZP_10225331.1| carbamoyl phosphate synthase small subunit [Pantoea agglomerans
IG1]
Length = 382
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/282 (46%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N DEES Q GLVIR L + SN+R E L YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNAADEESSQIHAQGLVIRDLPLIASNFRSEEGLSAYLQRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDF- 182
LR+ G+ G + ++ L+ ++++ + G+DL +V E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALQKAQAFPGLKGMDLAKEVCTTETYSWQQGS---WTLE 178
Query: 183 ----NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+ S Y V+AYD+G K NILR L GC++ VVP+ PA E LKL PDG+
Sbjct: 179 GGLPEQADAESLPYHVVAYDYGAKRNILRMLVDRGCRLTVVPAQTPAEEVLKLNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ ++ L ++PVFGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAISAIQAFLKTEIPVFGICLGHQLLALASG 280
>gi|226951538|ref|ZP_03822002.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp. ATCC
27244]
gi|294651180|ref|ZP_06728512.1| carbamoyl phosphate synthase small subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|226837730|gb|EEH70113.1| carbamoyl phosphate synthase small subunit [Acinetobacter sp. ATCC
27244]
gi|292822933|gb|EFF81804.1| carbamoyl phosphate synthase small subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 379
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQLVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDVESGRIHKVWANGLIIRDLPLLHSNFRSEQSLSEYLEQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ +++E + +R++ + G+DL + FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPAGFEWTEGS---WTLG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ P + L L PDGV SNGP
Sbjct: 182 QGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPIEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELLG--KVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK L+ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTLVDTTNLPVFGICLGHQILALASG 280
>gi|149927092|ref|ZP_01915350.1| carbamoyl-phosphate synthase small subunit [Limnobacter sp. MED105]
gi|149824313|gb|EDM83533.1| carbamoyl-phosphate synthase small subunit [Limnobacter sp. MED105]
Length = 395
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 175/284 (61%), Gaps = 15/284 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++ SFGA T+VGEVVFNTSLTGYQEI TDPSY Q V +T PHIGN G
Sbjct: 16 ALLALADGTVFEGISFGAPTTKVGEVVFNTSLTGYQEIATDPSYCRQIVTLTYPHIGNVG 75
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N DEES L+GLVI+ L SN+R L +YL + + GI +DTR +TR LR+
Sbjct: 76 TNPQDEESSGLHLSGLVIKDLPELVSNFRSTLPLADYLKKHGVPGIAGIDTRKLTRILRE 135
Query: 128 DGSLIGVLSTEESK---SDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES------TK 177
G+ G L TE+S S + +E+++ + + G+DL VS E EWVE
Sbjct: 136 KGAQNGCLLTEDSGETFSAERAIELAKGFPGLAGMDLAKVVSCTEVHEWVEGEWALGVAA 195
Query: 178 PDWDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+ F T ER + V+A+D+G K NILR LA GC++ VVP+ P + L L PDGV
Sbjct: 196 EEPHFQTGER---PHHVVAFDYGAKRNILRMLAQRGCRVTVVPAQTPVEKVLALNPDGVF 252
Query: 238 FSNGPGDPSAVPYAVAIVKELLG--KVPVFGICMGHQLLGQALG 279
SNGPGDP YA++ +K +L K+PVFGIC+GHQL+ A G
Sbjct: 253 LSNGPGDPEPCDYAISAIKHILDNTKLPVFGICLGHQLMALASG 296
>gi|254468607|ref|ZP_05082013.1| carbamoyl-phosphate synthase, small subunit [beta proteobacterium
KB13]
gi|207087417|gb|EDZ64700.1| carbamoyl-phosphate synthase, small subunit [beta proteobacterium
KB13]
Length = 379
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 181/276 (65%), Gaps = 10/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L+L+DG+ + S GA+ + VGEVVFNTS+TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 7 ALLILKDGTRFHGTSIGANTSSVGEVVFNTSITGYQEILTDPSYAEQIVTLTYPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
N +D ES + GL++ S+S +SN+R + L +L E NI I D+DTR +TR +R
Sbjct: 67 TNNEDYESNLPYCKGLIVHSVSPLSSNFRNQKDLVVFLKEHNIPAITDLDTRKLTRHIRN 126
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-H 185
+G+ G++ E DQ+ L M S+ + G+DL VS K+ + + E +W H
Sbjct: 127 NGAQPGLILIGE---DQDDLSMLDSFPGLSGMDLAKVVSTKKQYAFNEG---EWSLGEGH 180
Query: 186 ERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ S+T ++V+AYDFGIK NILR LAS G +IVVP+ E LKL PDG+ SNGPGD
Sbjct: 181 KHISETQFKVVAYDFGIKKNILRMLASRGADLIVVPAETDYKEVLKLNPDGIFLSNGPGD 240
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ +KE L + +P+FGIC+GHQLL ALG
Sbjct: 241 PEPCEYAIKNIKEFLKQSIPIFGICLGHQLLSLALG 276
>gi|73541865|ref|YP_296385.1| carbamoyl phosphate synthase small subunit [Ralstonia eutropha
JMP134]
gi|72119278|gb|AAZ61541.1| carbamoyl-phosphate synthase small subunit [Ralstonia eutropha
JMP134]
Length = 378
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 184/277 (66%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++R S GASG +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 7 SAILALADGTVFRGYSIGASGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNY 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I+ L I SN+R TLG+YL + ++ I +DTR +TR LR
Sbjct: 67 GVNREDVEATKVHAAGLIIKDLPILASNFRKEHTLGHYLKQEKVVAIAGIDTRKLTRILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + E Q+ ++++RS+ + G+DL VS KEP++W +S +W+
Sbjct: 127 EKGAQNGCILAGEDNV-QKAIDLARSFPGLAGMDLAKVVSVKEPYDWTQS---EWELGQG 182
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+++ + V+AYD+G+K NILR LA GC++ V+P+ A++ L L PDGV SNGPG
Sbjct: 183 YGKQDKPQFHVVAYDYGVKFNILRMLAERGCKVTVLPAQATAADALALNPDGVFLSNGPG 242
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+ +E + + +P FGIC+GHQ++ A+G
Sbjct: 243 DPEPCDYAIKATREFIERGIPTFGICLGHQIMALAIG 279
>gi|421481876|ref|ZP_15929459.1| carbamoyl phosphate synthase small subunit [Achromobacter
piechaudii HLE]
gi|400200191|gb|EJO33144.1| carbamoyl phosphate synthase small subunit [Achromobacter
piechaudii HLE]
Length = 384
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 174/276 (63%), Gaps = 9/276 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I+R S GA G V EVVFNT++TGYQEILTDPSY+GQ V +T PHIGNTG
Sbjct: 16 AILALADGTIFRGVSIGAHGATVAEVVFNTAMTGYQEILTDPSYSGQIVTLTYPHIGNTG 75
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + + AGLV+R SN+R ++L +YLA + I+ I +DTR +TR LR+
Sbjct: 76 VNAEDVEANRVYAAGLVVRDCPARVSNFRSTQSLPDYLAAQGIVAISGIDTRKLTRILRE 135
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ + + +E++R + + G DL +VS K EW E T W
Sbjct: 136 KGAQGACIFV--GTDAERAVELARGFGGMAGQDLAREVSVKTSSEWTEGT---WQLGKGF 190
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + + V+AYDFGIK NILR LA GC++ +VP+ A E LKL PDGV SNGPGD
Sbjct: 191 AKPDQSKFHVVAYDFGIKTNILRLLADRGCRLTLVPAQTSAEEVLKLNPDGVFLSNGPGD 250
Query: 245 PSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
P YA+ + L K+PVFGIC+GHQ++G A+G
Sbjct: 251 PEPCDYAITATRTFLDKKLPVFGICLGHQIMGLAVG 286
>gi|420369397|ref|ZP_14870115.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
1235-66]
gi|391321350|gb|EIQ78080.1| carbamoyl-phosphate synthase small chain [Shigella flexneri
1235-66]
Length = 382
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/282 (46%), Positives = 179/282 (63%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA+G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES Q GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNEADAESSQVHAQGLVIRDLPLIASNFRDTEDLSSYLKRHNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ EP+ W + + W
Sbjct: 122 LREKGAQNGCIIAGDNPDAALALEKAKAFPGLNGMDLAKEVTTAEPYSWTQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K+ + V+AYDFG K NILR LA GC++ VVP+ A + LK+ PDG+
Sbjct: 179 GDLPEAKSADELPFHVVAYDFGAKRNILRMLADRGCRLTVVPAKTSAEDVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAV-AIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDP+ YA+ AI K L +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPAPCDYAITAIQKFLETDIPIFGICLGHQLLALASG 280
>gi|339326476|ref|YP_004686169.1| arbamoyl-phosphate synthase small chain [Cupriavidus necator N-1]
gi|338166633|gb|AEI77688.1| arbamoyl-phosphate synthase small chain [Cupriavidus necator N-1]
Length = 378
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/277 (45%), Positives = 184/277 (66%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++R S GASG +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 7 SAILALADGTVFRGYSIGASGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNY 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I+ L I SN+R TL +YL + ++ I +DTR +TR LR
Sbjct: 67 GVNPEDVEATKVHAAGLIIKDLPILASNFRKEHTLAHYLKQEKVVAIAGIDTRKLTRILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + E Q+ ++++RS+ + G+DL VS KEP+EW T+ +W
Sbjct: 127 EKGAQNGCILAGEDNV-QKAIDLARSFPGLAGMDLAKVVSVKEPYEW---TQTEWKLGEG 182
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+++ + V+AYD+G+K+NILR LA GC++ V+P+ A++ L L PDGV SNGPG
Sbjct: 183 YGKQDKPQFHVVAYDYGVKYNILRMLAERGCKVTVLPAQASAADALALNPDGVFLSNGPG 242
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+A +E + + +P FGIC+GHQ++ A+G
Sbjct: 243 DPEPCDYAIAATREFIERGIPTFGICLGHQIMALAVG 279
>gi|90412471|ref|ZP_01220474.1| carbamoyl-phosphate synthase small subunit [Photobacterium
profundum 3TCK]
gi|90326508|gb|EAS42914.1| carbamoyl-phosphate synthase small subunit [Photobacterium
profundum 3TCK]
Length = 384
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 175/277 (63%), Gaps = 4/277 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++R S GA G+ +GEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFRGISIGADGSAIGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R +L +YL +NI+GI ++DTR +TR LR
Sbjct: 64 GTNSEDEESTSIHAQGLVIRDLPLLASNFRNERSLSDYLKSQNIVGIAEIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVES--TKPDWDFN 183
+ G+ G + ++ + LE ++ + + G+DL V+ E ++W + T D
Sbjct: 124 EKGAQNGCIMAGDNLDEALALEKAKEFPGLKGMDLAKVVTTAETYQWKQGSWTLLDGLPE 183
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+ + Y V+AYDFG K NILR L GC++ VVP+ A + L + PDGV SNGPG
Sbjct: 184 AKDDSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLAMNPDGVFLSNGPG 243
Query: 244 DPSAVPYAVAIVKELLG-KVPVFGICMGHQLLGQALG 279
DP YA+ K L +P+FGIC+GHQ+L A G
Sbjct: 244 DPEPCTYAIEATKTFLDIGLPIFGICLGHQILALASG 280
>gi|440229398|ref|YP_007343191.1| carbamoyl-phosphate synthase, small subunit [Serratia marcescens
FGI94]
gi|440051103|gb|AGB81006.1| carbamoyl-phosphate synthase, small subunit [Serratia marcescens
FGI94]
Length = 382
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 176/282 (62%), Gaps = 10/282 (3%)
Query: 5 VANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIG 64
+ +A LVLEDG+ + ++ GA GT VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIG
Sbjct: 2 IKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 61
Query: 65 NTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N G N D ES GLVIR L + SN+R E L +YL NI+ I D+DTR +TR
Sbjct: 62 NVGTNASDAESSAIHAQGLVIRDLPLVASNYRGEENLSDYLKRNNIVAIADIDTRKLTRL 121
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G+ G + ++ LE ++++ + G+DL +V+ +E + W + + W
Sbjct: 122 LREKGAQNGCIIAGDAPDAALALEKAKAFPGLKGMDLAKEVTTQEAYGWRQGS---WTLA 178
Query: 184 THERNSKT-----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLF 238
+K + V+AYDFG K NILR L GC++ VVP+ PA E LK+ PDG+
Sbjct: 179 GELPEAKAESELPFHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTPADEVLKMNPDGIFL 238
Query: 239 SNGPGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
SNGPGDP YA+A +++ L +P+FGIC+GHQLL A G
Sbjct: 239 SNGPGDPEPCDYAIAAIQQFLTTDIPLFGICLGHQLLALASG 280
>gi|113955367|ref|YP_730841.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
CC9311]
gi|113882718|gb|ABI47676.1| carbamoyl-phosphate synthase, small subunit [Synechococcus sp.
CC9311]
Length = 379
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/278 (42%), Positives = 178/278 (64%), Gaps = 2/278 (0%)
Query: 4 NVANARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHI 63
N ARLVL+DG++ + G G+ +GEVVFNT +TGYQE+LTDPSY+GQ + T P I
Sbjct: 5 NPFTARLVLQDGTVLEGFACGQRGSVIGEVVFNTGMTGYQEVLTDPSYSGQLITFTYPEI 64
Query: 64 GNTGVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITR 123
GNTGVN DD+E+ Q GL++R L+ SNWR ++L ++ + ++GI+ VDTRA+ R
Sbjct: 65 GNTGVNPDDQEADQPHARGLIVRQLAPQASNWRSQQSLPEWMEQNGVIGIHGVDTRALVR 124
Query: 124 RLRQDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR+ G + GV+S++ + + L E+ ++ + G++L V+ + W + +D
Sbjct: 125 HLRELGPMNGVISSDGRPALELLEELKQAPSMEGLNLADQVTTSTAYSWTKPCNVTFDQR 184
Query: 184 THERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
++ YRV+A DFGIK IL RL S+GC + V+P+ + L +P+GV SNGPG
Sbjct: 185 FQTSPARPYRVVAIDFGIKRAILERLVSHGCDLTVLPANTDINTVLSHEPEGVFLSNGPG 244
Query: 244 DPSAVPYAVAIVKELLG--KVPVFGICMGHQLLGQALG 279
DP+AV + + LL ++P+FGIC+GHQ+LG ALG
Sbjct: 245 DPAAVQSGITLASSLLEHRQLPMFGICLGHQILGLALG 282
>gi|430805039|ref|ZP_19432154.1| carbamoyl phosphate synthase small subunit [Cupriavidus sp. HMR-1]
gi|429502740|gb|ELA01046.1| carbamoyl phosphate synthase small subunit [Cupriavidus sp. HMR-1]
Length = 382
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 183/277 (66%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++R S GASG +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 7 SAILALADGTVFRGYSIGASGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNY 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I+ L I SN+R TL +YL + ++ I +DTR +TR LR
Sbjct: 67 GVNPEDVEATKVHAAGLIIKDLPILASNFRKEHTLAHYLKQEKVVAIAGIDTRKLTRILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + E Q+ ++++RS+ + G+DL VS KEP+EW T+ +W
Sbjct: 127 EKGAQNGCILAGEDNV-QKAIDLARSFPGLAGMDLAKVVSVKEPYEW---TQTEWKLGEG 182
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+++ + V+A+DFG+K NILR LA GC++ V+P+ A++ L L PDG+ SNGPG
Sbjct: 183 YGKQDKPQFHVVAFDFGVKFNILRMLAERGCKVTVLPAQASAADALALNPDGIFLSNGPG 242
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+A +E + + +P FGIC+GHQ++ A+G
Sbjct: 243 DPEPCDYAIAATREFIARGIPTFGICLGHQIMALAVG 279
>gi|427403729|ref|ZP_18894611.1| carbamoyl-phosphate synthase small chain [Massilia timonae CCUG
45783]
gi|425717712|gb|EKU80668.1| carbamoyl-phosphate synthase small chain [Massilia timonae CCUG
45783]
Length = 387
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 179/279 (64%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GA G GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 12 AILALADGTIFKGYSIGAVGHTTGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNYG 71
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN D E+ + AGL+IR L + SN+R ++LG+YL + N++ I +DTR +TR LR+
Sbjct: 72 VNSADVEAGKVHAAGLIIRDLPLLASNFRSTQSLGDYLKQENVVAIAGIDTRKLTRILRE 131
Query: 128 DGSLIGVLSTEES---KSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + T S + LE++RS+ + G+DL VS EP+E+ E+ +W
Sbjct: 132 KGAQAGAILTAAQGVEPSPAQALELARSFPGLAGMDLAKVVSVTEPYEFTET---EWKLG 188
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
++ Y V+A+D+G+K NILR LA GC++ V+P+ A++ L L PDG+ +NG
Sbjct: 189 EGFGKQTDPQYHVVAFDYGVKRNILRMLAERGCKVTVLPAQSTAADALALNPDGIFLANG 248
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ +EL+ K +P FGIC+GHQ++ A G
Sbjct: 249 PGDPEPCDYAINASRELIEKGIPTFGICLGHQIMALASG 287
>gi|283782353|ref|YP_003373108.1| carbamoyl-phosphate synthase small subunit [Pirellula staleyi DSM
6068]
gi|283440806|gb|ADB19248.1| carbamoyl-phosphate synthase, small subunit [Pirellula staleyi DSM
6068]
Length = 383
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 175/276 (63%), Gaps = 5/276 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A+L LEDG+++ ++GA G + GEV FNTS+TGYQEILTDPSY GQ V MT +GN G
Sbjct: 5 AKLALEDGTVFTGTAWGAIGERDGEVCFNTSMTGYQEILTDPSYRGQIVTMTYTEMGNYG 64
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ES + LAG V++ LS SN+R ++L +YLA I+GI +DTRA+ RRLR
Sbjct: 65 VNLEDLESEKPHLAGFVVKQLSQRPSNFRSQQSLHDYLARHGIVGIAGIDTRALVRRLRT 124
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHER 187
G++ GV+S+ + ++ + + S +VG DL+ +V P W E W E
Sbjct: 125 QGAMKGVISSIDLDNESLVRKAKNSPGLVGRDLVREVMPTAPRNWTEGLN-TWAKLPLES 183
Query: 188 N----SKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
N K V+A D+G+K NI R L+ GC++ ++P T A E L +PDGV SNGPG
Sbjct: 184 NPAFADKQLHVVALDYGMKWNIARHLSDEGCRVTILPGTATAEEVLSYEPDGVFLSNGPG 243
Query: 244 DPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
DP + YA ++ LLG+VPVFGIC+GHQLLG A G
Sbjct: 244 DPEPLVYAQDCIRGLLGEVPVFGICLGHQLLGLAAG 279
>gi|296136190|ref|YP_003643432.1| carbamoyl-phosphate synthase small subunit [Thiomonas intermedia
K12]
gi|295796312|gb|ADG31102.1| carbamoyl-phosphate synthase, small subunit [Thiomonas intermedia
K12]
Length = 383
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 176/283 (62%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DGSI+R S GASG VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN
Sbjct: 7 KAVLVLADGSIFRGLSIGASGQTVGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNV 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N D E+ Q AGL+I+ L + SN+R +TL YL + + I +DTR +TR LR
Sbjct: 67 GANAQDVEAAQVHAAGLIIKDLPLQMSNYRGEQTLDAYLRQNGTVAIAGIDTRRLTRHLR 126
Query: 127 QDGSLIGVLSTEESKSD------QELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPD 179
+G+ G + E+ D Q LE +R + + G+DL V+ +P++W +S D
Sbjct: 127 TEGAQSGCVIALEAGQDITDAVIQTALEGARGFAGLAGMDLARVVTTPQPYDWTQS---D 183
Query: 180 WDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
W + + V+AYDFG+K NILR LA+ GC++ VVP+ A++ L L+P+GV
Sbjct: 184 WSLERGYGDMSQPLRHVVAYDFGVKFNILRLLAARGCRVTVVPAQTSAADVLALRPNGVF 243
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+A + ++ +P FGIC+GHQ++G A G
Sbjct: 244 LSNGPGDPEPCDYAIAATQSIIAAGMPTFGICLGHQIMGLAAG 286
>gi|237745679|ref|ZP_04576159.1| multifunctional protein CAD [Oxalobacter formigenes HOxBLS]
gi|229377030|gb|EEO27121.1| multifunctional protein CAD [Oxalobacter formigenes HOxBLS]
Length = 382
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 179/278 (64%), Gaps = 13/278 (4%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++ S GASG GEVVFNTS+TGYQEILTDPSY+GQ V +T PHIGNTG
Sbjct: 11 AVLALADGTVFHGYSIGASGETAGEVVFNTSMTGYQEILTDPSYSGQIVTLTYPHIGNTG 70
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D ESR+ AG +++ + SN+R ++L +YL E+NI+ I +DTR +TR LR+
Sbjct: 71 VNPEDVESRRIQAAGFIVKDVQPVISNFRATQSLPDYLKEQNIVAIAGIDTRKLTRILRE 130
Query: 128 DGSLIG--VLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT 184
G+ G V+ +ES++ L ++RS + G DL +V+ E +EW E+ W+ +
Sbjct: 131 KGAQSGAIVVGDDESRA----LALARSCSGLSGQDLAKEVTTGESYEWTEA---GWELGS 183
Query: 185 --HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+A+DFG+K NILR L GC++ V+P+ A E LKL PDG+ SNGP
Sbjct: 184 GYKQLGDFKYHVVAFDFGVKRNILRMLTDRGCKVTVLPAQSSAEEVLKLSPDGIFLSNGP 243
Query: 243 GDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
GDP YA+ + L+ + +P FGIC+GHQ++ A G
Sbjct: 244 GDPEPCTYAIEAARNLIERGIPTFGICLGHQIMALAAG 281
>gi|94311133|ref|YP_584343.1| carbamoyl phosphate synthase small subunit [Cupriavidus
metallidurans CH34]
gi|93354985|gb|ABF09074.1| carbamoyl phosphate synthetase small subunit, glutamine
amidotransferase [Cupriavidus metallidurans CH34]
Length = 382
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/277 (45%), Positives = 183/277 (66%), Gaps = 8/277 (2%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG+++R S GASG +GEVVFNT++TGYQEILTDPSY+ Q V +T PHIGN
Sbjct: 7 SAILALADGTVFRGYSIGASGHTIGEVVFNTAITGYQEILTDPSYSRQIVTLTYPHIGNY 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D E+ + AGL+I+ L I SN+R TL +YL + ++ I +DTR +TR LR
Sbjct: 67 GVNPEDVEATKVHAAGLIIKDLPILASNFRKEHTLAHYLKQEKVVAIAGIDTRKLTRILR 126
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT- 184
+ G+ G + E Q+ ++++RS+ + G+DL VS KEP+EW T+ +W
Sbjct: 127 EKGAQNGCILAGEDNV-QKAIDLARSFPGLAGMDLAKVVSVKEPYEW---TQTEWKLGEG 182
Query: 185 -HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPG 243
+++ + V+A+DFG+K NILR LA GC++ V+P+ A++ L L PDG+ SNGPG
Sbjct: 183 YGKQDKPQFHVVAFDFGVKFNILRMLAERGCKVTVLPAQASAADALALNPDGIFLSNGPG 242
Query: 244 DPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
DP YA+A +E + + +P FGIC+GHQ++ A+G
Sbjct: 243 DPEPCDYAIAATREFIARGIPTFGICLGHQIMALAVG 279
>gi|425744994|ref|ZP_18863049.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
baumannii WC-323]
gi|425490590|gb|EKU56890.1| carbamoyl-phosphate synthase, small subunit [Acinetobacter
baumannii WC-323]
Length = 379
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/279 (45%), Positives = 177/279 (63%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+I++ S GASG+ GEVVFNT++TGYQEILTDPSYA Q V +T PHIGNTG
Sbjct: 5 AILALADGTIFKGTSIGASGSTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
Query: 68 VNFDDEES---RQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRR 124
N +D ES + + GL+IR L + SN+R ++L YL + N++ I D+DTR +TR
Sbjct: 65 CNSEDVESGRIHKVWANGLIIRDLPLLHSNFRSEQSLSEYLEQHNVVAIADIDTRKLTRI 124
Query: 125 LRQDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFN 183
LR G+ G + E+ ++++ + +R + + G+DL + FEW E + W
Sbjct: 125 LRDKGAQNGCILAGENITEEQAIAKAREFGGLNGLDLAKECCDPTGFEWTEGS---WTLG 181
Query: 184 T-HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ Y V+AYD+G+K NILR LA GC++ VVP+ PA + L L PDGV SNGP
Sbjct: 182 QGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAQTPAEKVLALNPDGVFLSNGP 241
Query: 243 GDPSAVPYAVAIVKELL--GKVPVFGICMGHQLLGQALG 279
GDP+A YA+ VK ++ +PVFGIC+GHQ+L A G
Sbjct: 242 GDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASG 280
>gi|385208681|ref|ZP_10035549.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp.
Ch1-1]
gi|385181019|gb|EIF30295.1| carbamoyl-phosphate synthase, small subunit [Burkholderia sp.
Ch1-1]
Length = 384
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/276 (47%), Positives = 180/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GA G +GEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 8 ALLALADGTVFRGYSIGAPGHTIGEVVFNTAITGYQEILTDPSYARQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+IR L + SN+R TL YL + ++ I +DTR +TR LR
Sbjct: 68 VNAEDVEATKVHAAGLIIRDLPVLASNFRMERTLQQYLQDEGVVAIAGLDTRMLTRVLRD 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + S + +E++RS+ + G+DL VS KE +EW T+ +W +
Sbjct: 128 KGAQNGAI-LAGSDDEARAVELARSFPGLSGMDLAKVVSTKESYEW---TQTEWRLGSGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+N+ YRV+A+D+G+K+NILR LA GC + V+P+ A++ L L PDGV SNGPGD
Sbjct: 184 GTQNAPKYRVVAFDYGVKYNILRMLAERGCHVTVLPAEASAADALALDPDGVFLSNGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ KEL+ + +P FGIC+GHQ++G ALG
Sbjct: 244 PEPCDYAIRATKELIERGIPTFGICLGHQIMGLALG 279
>gi|421747726|ref|ZP_16185407.1| carbamoyl phosphate synthase small subunit [Cupriavidus necator
HPC(L)]
gi|409773629|gb|EKN55390.1| carbamoyl phosphate synthase small subunit [Cupriavidus necator
HPC(L)]
Length = 378
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/276 (44%), Positives = 181/276 (65%), Gaps = 8/276 (2%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L L DG+++R S GASG +GEVVFNT+LTGYQEILTDPSY+ Q V +T PHIGN G
Sbjct: 8 AILALADGTVFRGYSIGASGHTIGEVVFNTALTGYQEILTDPSYSRQIVTLTYPHIGNVG 67
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGL+I+ L + SN+R TL +YL + + I +DTR +TR LR+
Sbjct: 68 VNSEDVEATKVHAAGLIIKDLPLLASNFRKQHTLPHYLKQEKVPAIAGIDTRKLTRILRE 127
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNT-- 184
G+ G + E + Q+ ++++RS+ + G+DL VS KEP+EW ++ +W
Sbjct: 128 KGAQNGCILAGEDNA-QKAIDLARSFPGLAGMDLAKVVSVKEPYEWNQT---EWALERGY 183
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+ + + V+A+D+G+K NILR LA GC+I V+P+ A++ L KPDG+ +NGPGD
Sbjct: 184 GKLENPRFHVVAFDYGVKFNILRMLAQRGCRITVLPAQSTAADALAYKPDGIFLANGPGD 243
Query: 245 PSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
P YA+ +E L + +P FGIC+GHQ++G A+G
Sbjct: 244 PEPCDYAIRATQEFLQRGIPTFGICLGHQIMGLAVG 279
>gi|302344545|ref|YP_003809074.1| carbamoyl-phosphate synthase small subunit [Desulfarculus baarsii
DSM 2075]
gi|301641158|gb|ADK86480.1| carbamoyl-phosphate synthase, small subunit [Desulfarculus baarsii
DSM 2075]
Length = 394
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 177/282 (62%), Gaps = 10/282 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L LEDG+I+ ++F G EV FNT++TGYQE+LTDPSY GQ V+MT P IGN
Sbjct: 4 KALLALEDGTIFWCRAFAGGGEVAAEVCFNTAMTGYQEVLTDPSYHGQMVVMTYPLIGNY 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN +D ES ++ +++ SN+R +L YL +MG+ +DTRA+TR LR
Sbjct: 64 GVNPEDVESAAVQVSAFLVKEYIDFPSNFRATASLRQYLEAAGVMGVEGLDTRALTRHLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKP------DW 180
G++ GVLST + + + + S +VG+DL+ +V+ ++ + W + KP +
Sbjct: 124 MRGAMKGVLSTLDLDPESLVAKAKASPGLVGLDLVKNVTCQKAYRW-QDGKPGPTLDLEG 182
Query: 181 DFNTH---ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
+F+ +RV A D GIK+NILRRL GC ++V+P+ PA ++L PDGV
Sbjct: 183 EFDAQAVWAGGQGRFRVAALDCGIKYNILRRLEKRGCNLVVLPAHTPAETIMRLDPDGVF 242
Query: 238 FSNGPGDPSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
SNGPGDPSAV Y V V+ LLG+ P+FGIC+GHQ++GQALG
Sbjct: 243 LSNGPGDPSAVTYVVETVRRLLGQAPIFGICLGHQMIGQALG 284
>gi|336449993|ref|ZP_08620450.1| carbamoyl-phosphate synthase, small subunit [Idiomarina sp. A28L]
gi|336283150|gb|EGN76357.1| carbamoyl-phosphate synthase, small subunit [Idiomarina sp. A28L]
Length = 393
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/279 (47%), Positives = 175/279 (62%), Gaps = 10/279 (3%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DG+++ + GA G VGEVVFNT++TGYQEILTDPSYA Q V +T PHIGN G
Sbjct: 12 AILVLADGTVFNGTAIGADGQAVGEVVFNTAMTGYQEILTDPSYAEQIVTLTYPHIGNYG 71
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
+D ES + + GLVIR LS SN+R ++L +YL +NI+GI D+DTR +T RLR+
Sbjct: 72 TTPEDSESSRIWAKGLVIRDLSPIASNFRSTQSLSDYLKAQNILGIADIDTRRLTNRLRE 131
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD----IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + T + S+ + E + + G+DL + + W E T W
Sbjct: 132 TGAQNGCIITYAAGSEAPIAEALAAAKGFPGLAGMDLAKVATCDTAYPWTEGT---WKLG 188
Query: 184 T-HERNSKT-YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
H +T + V+AYDFG K NILR LA GC+I VVP+ A++ L LKPDG+ SNG
Sbjct: 189 VGHSEQGETRFHVVAYDFGAKLNILRMLADRGCKITVVPAQTSAADVLALKPDGIFLSNG 248
Query: 242 PGDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
PGDP+ YA+A +K L K+P+FGIC+GHQLL A G
Sbjct: 249 PGDPAPCDYAIAAIKVFLEKKLPIFGICLGHQLLALATG 287
>gi|410694000|ref|YP_003624622.1| Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate
synthetase glutamine chain) [Thiomonas sp. 3As]
gi|294340425|emb|CAZ88806.1| Carbamoyl-phosphate synthase small chain (Carbamoyl-phosphate
synthetase glutamine chain) [Thiomonas sp. 3As]
Length = 383
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 175/283 (61%), Gaps = 13/283 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A LVL DGSI+R S GASG VGEVVFNT++TGYQEILTDPSY Q V +T PHIGN
Sbjct: 7 KAVLVLADGSIFRGLSIGASGQTVGEVVFNTAMTGYQEILTDPSYCRQIVTLTYPHIGNV 66
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N D E+ Q AGL+I+ L + SN+R +TL YL + + I +DTR +TR LR
Sbjct: 67 GANAQDVEAAQVHAAGLIIKDLPLQMSNYRGEQTLDAYLRQNGTVAIAGIDTRRLTRHLR 126
Query: 127 QDGSLIGVLSTEESKSD------QELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPD 179
+G+ G + E+ D Q L+ +R + + G+DL V+ +P+EW T+ D
Sbjct: 127 TEGAQSGCVIALEAGQDITDAVIQTALDGARGFAGLAGLDLARVVTTSQPYEW---TQTD 183
Query: 180 WDFNT--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVL 237
W + V+AYDFG+K NILR LA+ GC++ VVP+ A++ L L+P+GV
Sbjct: 184 WSLERGYGDMTQPLRHVVAYDFGVKFNILRLLAARGCRVTVVPAQTSAADVLALRPNGVF 243
Query: 238 FSNGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
SNGPGDP YA+A + ++ +P FGIC+GHQ++G A G
Sbjct: 244 LSNGPGDPEPCDYAIAATQSIIAADMPTFGICLGHQIMGLAAG 286
>gi|149200298|ref|ZP_01877318.1| carbamoyl-phosphate synthase, small subunit [Lentisphaera araneosa
HTCC2155]
gi|149136595|gb|EDM25028.1| carbamoyl-phosphate synthase, small subunit [Lentisphaera araneosa
HTCC2155]
Length = 386
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 175/275 (63%), Gaps = 5/275 (1%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A L LEDG+I+R S GA +GE VFNT +TGYQEIL+DPSYAGQF+ MT P +GN G
Sbjct: 15 AFLALEDGTIFRGYSIGADKNCLGETVFNTGMTGYQEILSDPSYAGQFICMTYPEMGNYG 74
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
D E+R+ F GL+I + + SNWR L +L + I + +DTRA+T +LR
Sbjct: 75 TTPVDMEARKTFSNGLIIHNPN-DDSNWRSDNKLSQFLKDNGIPALAGIDTRALTLKLRT 133
Query: 128 DGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWV--ESTKPDWDFNT 184
DG++ + ++ S S+ E +E++++W+ + G D + VS E FEW +S W
Sbjct: 134 DGAMKSYICSDGSVSEAEAIELAKNWEGLEGQDYAAKVSCDEVFEWDPDDSISSSWGTGD 193
Query: 185 HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGD 244
+K Y+++AYDFGIK NILR L G ++ VVP+ PASE + + PD V FSNGP D
Sbjct: 194 ELPEAK-YKLVAYDFGIKWNILRGLRRSGFKVTVVPAKTPASEVIAMNPDAVFFSNGPAD 252
Query: 245 PSAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
P AV YAV KEL+GK P+ GIC+GHQ+LG A G
Sbjct: 253 PKAVTYAVDAAKELIGKYPIMGICLGHQILGLASG 287
>gi|148242430|ref|YP_001227587.1| carbamoyl phosphate synthase small subunit [Synechococcus sp.
RCC307]
gi|259585675|sp|A5GTM5.1|CARA_SYNR3 RecName: Full=Carbamoyl-phosphate synthase small chain; AltName:
Full=Carbamoyl-phosphate synthetase glutamine chain
gi|147850740|emb|CAK28234.1| Carbamoylphosphate synthase small subunit [Synechococcus sp.
RCC307]
Length = 382
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/272 (44%), Positives = 175/272 (64%), Gaps = 2/272 (0%)
Query: 10 LVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVN 69
LVL DG+++R + FGA GT +GEVVFNT ++GYQE++TDPSY GQ + T P +GNTGVN
Sbjct: 5 LVLADGTVFRGQGFGAKGTAIGEVVFNTGMSGYQEVITDPSYTGQLITFTYPELGNTGVN 64
Query: 70 FDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQDG 129
+D E+ + ++ R L+ SNWR + TL +L + ++G+ +DTRA+ R+LR G
Sbjct: 65 QEDLEADTPAVKAVLCRCLAPQPSNWRSSGTLEQWLEQHGVVGLKGIDTRAVVRQLRDGG 124
Query: 130 SLIGVLSTEESKSDQELLEMSRSWDIVGIDLISDVSGKEPFEWVESTKPDWDFNTHERNS 189
++ G +ST+ + + L ++ + + G +L VS + W T +D ++
Sbjct: 125 AINGAVSTDGTSPAELLKQVLAAPSMAGQNLAERVSTTRAYRWSSPTAAAFDRRLQDQPV 184
Query: 190 KTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDPSAVP 249
YRV+A DFGIK IL RL+++GC + V+P+ A L LKPDGV SNGPGDPSAV
Sbjct: 185 DRYRVVAIDFGIKRAILERLSAHGCDVEVLPAGSDADAVLALKPDGVFLSNGPGDPSAVG 244
Query: 250 YAVAIVKELLG--KVPVFGICMGHQLLGQALG 279
+A+ K+LL +P+FGIC+GHQ+LG ALG
Sbjct: 245 SGIALAKQLLSDPALPMFGICLGHQILGLALG 276
>gi|269103420|ref|ZP_06156117.1| carbamoyl-phosphate synthase small chain [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163318|gb|EEZ41814.1| carbamoyl-phosphate synthase small chain [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 379
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 176/281 (62%), Gaps = 12/281 (4%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLEDG+++ S GA G+ VGEVVFNTS+TGYQEILTDPSY+ Q V +T PHIGNT
Sbjct: 4 SALLVLEDGTVFHGMSIGADGSAVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N +DEES GLVIR L + SN+R +L +YL +NI+GI ++DTR +TR LR
Sbjct: 64 GTNSEDEESTSIHAQGLVIRDLPLIASNFRNQLSLSDYLKSQNIVGIAEIDTRKLTRILR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEW------VESTKPD 179
+ G+ G + S + ++ + + G+DL +V+ E + W +E+ P
Sbjct: 124 EKGAQNGCIVAGNSLDEAFAQAQAQGFPGLSGMDLAKEVTTPETYSWKQGSWTLENGLP- 182
Query: 180 WDFNTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFS 239
D + E Y V+AYDFG K NILR L GC++ VVP+ A E L L PDGV S
Sbjct: 183 QDLDDCEL---PYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEEVLALNPDGVFLS 239
Query: 240 NGPGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
NGPGDP+ YA+A K L K +PVFGIC+GHQ+L A G
Sbjct: 240 NGPGDPAPCDYAIAATKVFLDKNLPVFGICLGHQILALASG 280
>gi|153005052|ref|YP_001379377.1| carbamoyl phosphate synthase small subunit [Anaeromyxobacter sp.
Fw109-5]
gi|152028625|gb|ABS26393.1| carbamoyl-phosphate synthase, small subunit [Anaeromyxobacter sp.
Fw109-5]
Length = 372
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/274 (45%), Positives = 174/274 (63%), Gaps = 3/274 (1%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
A L L DG+ + ++FGA+G GEVVFNTS+TGYQEILTDPSY GQ + MT P GN
Sbjct: 3 QAILALADGTTFEGRAFGATGEATGEVVFNTSMTGYQEILTDPSYVGQMICMTYPEQGNY 62
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
GVN D+ES + G ++++ + S++R +L +YL + I+GI +DTR +TR LR
Sbjct: 63 GVNGPDDESARPHATGFIVKNFAEAPSSFRSERSLESYLVQHGIVGIAGIDTRRLTRHLR 122
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
GS +GV++TE S + L+E +R+ + G DL + +S + W E+ W
Sbjct: 123 TAGSQMGVVATEGSA--KALVERARALPGMEGQDLATRISTDRSYGWSETGADAWSDGER 180
Query: 186 ERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGPGDP 245
+ V+AYD+G+K +LR LA GC+I VVP+ A+E L LKPDGV +NGPGDP
Sbjct: 181 PEAKARFHVVAYDWGLKRAMLRLLAEQGCRITVVPARTTAAEALALKPDGVFLTNGPGDP 240
Query: 246 SAVPYAVAIVKELLGKVPVFGICMGHQLLGQALG 279
+AV A V ++GKVP+FGIC+GHQ+L A+G
Sbjct: 241 AAVVGARETVAAMIGKVPIFGICLGHQILSLAVG 274
>gi|74317145|ref|YP_314885.1| carbamoyl-phosphate synthase small subunit [Thiobacillus
denitrificans ATCC 25259]
gi|74056640|gb|AAZ97080.1| Carbamoyl-phosphate synthase, small subunit [Thiobacillus
denitrificans ATCC 25259]
Length = 379
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/279 (49%), Positives = 185/279 (66%), Gaps = 14/279 (5%)
Query: 8 ARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTG 67
A LVL DGS++R +S GA G GEVVFNT+LTGYQEILTDPSY+ Q V +T PHIGNTG
Sbjct: 7 AILVLADGSVFRGRSIGADGITTGEVVFNTALTGYQEILTDPSYSRQIVTLTYPHIGNTG 66
Query: 68 VNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLRQ 127
VN +D E+ + AGLV+R + SN+R AE+L +YLA +NI+GI D+DTR +TR LR+
Sbjct: 67 VNPEDVEAGRIHAAGLVVRDVPRRHSNFRSAESLSDYLASQNIVGIADIDTRRLTRILRE 126
Query: 128 DGSLIGVL---STEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFN 183
G+ G + +ESK+ LE +R++ + G+DL V+ +EW E+ +W
Sbjct: 127 KGAQSGCVMAGGVDESKA----LEAARAFPGLAGMDLAKVVTAPAMYEWHET---EWRLG 179
Query: 184 T--HERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
+ + Y V+ +D+G+K NILR LA GC++ V+P+T A+E L LKPDG+ SNG
Sbjct: 180 RGYGQVSEPRYHVVGFDYGVKRNILRMLAERGCRVTVLPATATAAEALALKPDGIFLSNG 239
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP YA+ + EL+G VP FGIC+GHQLL A G
Sbjct: 240 PGDPEPCDYAIRAIGELVGAGVPTFGICLGHQLLALASG 278
>gi|94676744|ref|YP_588988.1| carbamoyl-phosphate synthase, small subunit [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94219894|gb|ABF14053.1| carbamoyl-phosphate synthase, small subunit [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 381
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/279 (46%), Positives = 176/279 (63%), Gaps = 9/279 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A LVLE+G+ + K+ GA GT VGEVVFNTS+TGYQEIL+DPSY Q V +T PHIGNT
Sbjct: 4 SALLVLENGTKFYGKAIGARGTTVGEVVFNTSMTGYQEILSDPSYFHQIVTLTYPHIGNT 63
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G N D ES GLVIR L I TSN+R + +L YL NI+GI D+DTR +TR LR
Sbjct: 64 GTNEIDNESLHVQAQGLVIRDLPILTSNFRSSMSLSEYLERNNIIGISDIDTRKLTRLLR 123
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSWD-IVGIDLISDVSGKEPFEWVESTKPDWDFNTH 185
++G+ G + + + + L +R + + GIDL +VS +P+ W + W+ N
Sbjct: 124 EEGTQNGCIIAGDPLNTKLALCKAREFPGLNGIDLAKEVSTTQPYIWNHGS---WNLNQS 180
Query: 186 ERNSKT----YRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNG 241
N Y V+ YD+GIK NI+R L GC++ VVP+ A L + PDG+L +NG
Sbjct: 181 TNNITNAYLPYHVVVYDYGIKRNIMRMLVDRGCRLTVVPAQTTADTVLAMYPDGILLANG 240
Query: 242 PGDPSAVPYAVAIVKELLGK-VPVFGICMGHQLLGQALG 279
PGDP+ YA+ ++++L + +P+FGIC GHQLL A G
Sbjct: 241 PGDPAPCDYAITAIQQILTQNIPIFGICFGHQLLAIASG 279
>gi|399115861|emb|CCG18665.1| carbamoyl-phosphate synthase small chain [Taylorella equigenitalis
14/56]
Length = 383
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 181/278 (65%), Gaps = 11/278 (3%)
Query: 7 NARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNT 66
+A L L DG++++ S G G VGE+VFNTS+TGYQEILTDPSY+ Q + +T PHIGNT
Sbjct: 15 SAILALADGTVFKGISIGVDGHTVGEIVFNTSMTGYQEILTDPSYSQQIITLTYPHIGNT 74
Query: 67 GVNFDDEESRQCFLAGLVIRSLSIGTSNWRCAETLGNYLAERNIMGIYDVDTRAITRRLR 126
G+N +D ES +GLV+R+ S++R ++L YL E I+ I ++DTR +TR LR
Sbjct: 75 GINSEDIESNIIRASGLVVRNCPKVVSSFRSQKSLPEYLKENGIVSISEIDTRKLTRILR 134
Query: 127 QDGSLIGVLSTEESKSDQELLEMSRSW-DIVGIDLISDVSGKEPFEWVE---STKPDWDF 182
G+ + + +Q+ +E+++++ +VG DL SD S KE W E S K +
Sbjct: 135 DKGAQGACILVGD--DEQKAIELAKNYPGMVGQDLASDASVKEKINWTEGAWSLKRGYSS 192
Query: 183 NTHERNSKTYRVIAYDFGIKHNILRRLASYGCQIIVVPSTWPASETLKLKPDGVLFSNGP 242
+ R + V+AYDFGIK+NILR L GC+I +VPST A E L L PDGV +NGP
Sbjct: 193 DCETR----FHVVAYDFGIKYNILRLLHERGCKITLVPSTTTAQEVLGLNPDGVFLANGP 248
Query: 243 GDPSAVPYAVAIVKELL-GKVPVFGICMGHQLLGQALG 279
GDPSAV YA+ K +L K+P+FGIC+GHQ++G ALG
Sbjct: 249 GDPSAVGYAIDTAKVILDKKIPLFGICLGHQIMGLALG 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,652,620,693
Number of Sequences: 23463169
Number of extensions: 197799681
Number of successful extensions: 498498
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9899
Number of HSP's successfully gapped in prelim test: 3582
Number of HSP's that attempted gapping in prelim test: 467796
Number of HSP's gapped (non-prelim): 14299
length of query: 279
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 139
effective length of database: 9,074,351,707
effective search space: 1261334887273
effective search space used: 1261334887273
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)