BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039155
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1
SV=1
Length = 393
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 30 LVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGI 81
L+G+L AL A+ YG+++ +++M+ G +GLF L+ LW + L G
Sbjct: 224 LIGNLLALAGAVLYGVYSTLLKREVGDETRVNMKIFFGFVGLFNLLFLWPSLIVLDFFGW 283
Query: 82 EPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMF 141
EP F+ P K II N + FVSD+ WA ++ TSPL +G+S+TIPLAM D+
Sbjct: 284 EP-FSLPKDPKVVVIIFVNCLI-TFVSDFCWAKAMLLTSPLTVTVGLSITIPLAMFGDVI 341
Query: 142 IHHQHYSPIYIIGS 155
H+ S +Y+ G+
Sbjct: 342 FKHKTMSALYLFGA 355
>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=THI74 PE=1 SV=1
Length = 370
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 15 ADEPQSSISKNRKHYLVGDLFALLSAMTYGLFTGRRK---------LDMQKLVGCIGLFT 65
+ + Q S+S + +LVG+ ALL ++ Y ++T K LD+Q +G +G+FT
Sbjct: 192 SSKQQDSVSASS--FLVGNTLALLGSLGYSVYTTLLKYEISSKGLRLDIQMFLGYVGIFT 249
Query: 66 LVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAA 125
+ W ++ L +E F P + + +++ N + FVSDYFW ++ TSPLV
Sbjct: 250 FLLFWPILIILDITHME-TFELPSNFHISFLVMLNCII-IFVSDYFWCKALILTSPLVVT 307
Query: 126 LGVSLTIPLAMLEDMFIHHQHYSPIYIIGSV 156
+ ++ TIPLAM D ++P YIIG +
Sbjct: 308 VALTFTIPLAMFADFVWREAFFTPWYIIGVI 338
>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis
GN=SLC35F5 PE=2 SV=1
Length = 432
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 20 SSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWW 71
S K+ +G +++L AM Y ++ KLD+ G +GLF L+ LW
Sbjct: 226 SGSEKSAGRNTIGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 285
Query: 72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
+ L G E F FP+ III NG +G +S++ W G TS L+ L +SLT
Sbjct: 286 GFFLLHYTGFE-DFEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 343
Query: 132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
IPL+++ DM + +S ++ G++
Sbjct: 344 IPLSIIADMCMQKVQFSWLFFAGAI 368
>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2
SV=1
Length = 523
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 31 VGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIE 82
VG +++L AM Y ++ KLD+ G +GLF L+ LW + L G E
Sbjct: 328 VGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 387
Query: 83 PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
F FP+ III NG +G +S++ W G TS L+ L +SLTIPL+++ DM +
Sbjct: 388 -DFEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 445
Query: 143 HHQHYSPIYIIGSV 156
+S ++ G++
Sbjct: 446 QKVQFSWLFFAGAI 459
>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2
SV=1
Length = 524
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 20 SSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWW 71
S K+ +G +++L+ AM Y ++ KLD+ G +GLF L+ LW
Sbjct: 318 SGSEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWP 377
Query: 72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131
+ L G E F FP+ I+I NG +G +S++ W G TS L+ L +SLT
Sbjct: 378 GFFLLHYTGFE-DFEFPNKVVLMCIVI-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLT 435
Query: 132 IPLAMLEDMFIHHQHYSPIYIIGSV 156
IPL+++ DM + +S ++ G++
Sbjct: 436 IPLSIIADMCMQKVQFSWLFFAGAI 460
>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2
SV=1
Length = 523
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 31 VGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIE 82
+G +++L AM Y ++ KLD+ G +GLF L+ LW + L G E
Sbjct: 328 IGSIWSLAGAMLYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 387
Query: 83 PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
F FP+ III NG +G +S++ W G TS L+ L +SLTIPL+++ DM +
Sbjct: 388 -DFEFPNKVVLMCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 445
Query: 143 HHQHYSPIYIIGSV 156
+S ++ G++
Sbjct: 446 QKVQFSWLFFAGAI 459
>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2
SV=1
Length = 524
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 31 VGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIE 82
+G +++L AM Y ++ KLD+ G +GLF L+ LW + L G E
Sbjct: 329 IGSIWSLAGAMFYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE 388
Query: 83 PKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142
F FP+ III NG +G +S++ W G TS L+ L +SLTIPL+++ DM +
Sbjct: 389 -DFEFPNKVVLLCIII-NGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCM 446
Query: 143 HHQHYSPIYIIGSV 156
+S ++ G++
Sbjct: 447 QKVQFSWLFFAGAI 460
>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1
Length = 341
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 59 GCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVR 118
G +GLF L+ LW + L G+E +F+ P + ++I N + FVSDY W + ++
Sbjct: 229 GLVGLFDLILLWPFLIILHLYGVE-RFSLPSTTAGLIVLIINASI-TFVSDYLWVIAMLM 286
Query: 119 TSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSV 156
TSPL+ +G+SL+IPLA+ D+ + + + I+GS+
Sbjct: 287 TSPLLVTVGMSLSIPLALFFDILLKGHYLNFSLILGSL 324
>sp|Q8YAF7|Y169_LISMO Putative sugar uptake protein lmo0169 OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmo0169
PE=3 SV=1
Length = 285
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 85 FAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLA 135
F F + TA IIIA+ FVS FW+LG + +GVS T+PL+
Sbjct: 46 FIFTNPEYTATIIIAS-----FVSGAFWSLGQMNQFRAFTQVGVSKTMPLS 91
>sp|Q92F94|Y212_LISIN Putative sugar uptake protein lin0212 OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=lin0212 PE=3 SV=1
Length = 285
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 85 FAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLA 135
F F + TA IIIA+ F+S FW+LG + +GVS T+PL+
Sbjct: 46 FIFTNPEYTATIIIAS-----FISGAFWSLGQMNQFRAFTQVGVSKTMPLS 91
>sp|Q9LFX9|PTR13_ARATH Nitrate transporter 1.6 OS=Arabidopsis thaliana GN=NRT1.6 PE=1 SV=2
Length = 576
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 31 VGDLFALLSAMTYGLFTGRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAF 87
+G +FA+LS T G G R+ ++ T ++++WL PL MG+ F F
Sbjct: 408 IGIVFAILSMFTAGFVEGVRRTRATEM-------TQMSVFWLALPLILMGLCESFNF 457
>sp|P61403|Y220_BACC1 Putative sugar uptake protein BCE_0220 OS=Bacillus cereus (strain
ATCC 10987) GN=BCE_0220 PE=3 SV=1
Length = 283
Score = 30.4 bits (67), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 85 FAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLA 135
+ F A T I+I F+S FWALG V V LGVS T+ ++
Sbjct: 46 YVFTQPALTMTILIVG-----FISGLFWALGQVNQLKTVEKLGVSTTVTIS 91
>sp|Q81IX5|Y219_BACCR Putative sugar uptake protein BC_0219 OS=Bacillus cereus (strain
ATCC 14579 / DSM 31) GN=BC_0219 PE=3 SV=1
Length = 283
Score = 30.4 bits (67), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 85 FAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLA 135
+ F A T I+I F+S FWALG V V LGVS T+ ++
Sbjct: 46 YVFTQPALTMTILIVG-----FISGLFWALGQVNQLKTVEKLGVSTTVTIS 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,214,435
Number of Sequences: 539616
Number of extensions: 2761803
Number of successful extensions: 8367
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8343
Number of HSP's gapped (non-prelim): 22
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)