Query 039155
Match_columns 206
No_of_seqs 115 out of 552
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 06:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039155.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039155hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2765 Predicted membrane pro 100.0 3.9E-33 8.4E-38 248.6 13.0 165 1-173 223-396 (416)
2 PF06027 DUF914: Eukaryotic pr 99.8 2.2E-19 4.7E-24 160.9 14.0 168 1-177 143-315 (334)
3 PRK10532 threonine and homoser 99.7 9.2E-16 2E-20 134.1 15.8 133 29-169 146-283 (293)
4 PRK11453 O-acetylserine/cystei 99.6 1.1E-14 2.4E-19 127.5 14.1 138 29-169 141-289 (299)
5 PRK11689 aromatic amino acid e 99.6 1.7E-14 3.6E-19 126.3 13.8 131 29-169 154-289 (295)
6 PLN00411 nodulin MtN21 family 99.6 5.3E-14 1.2E-18 127.2 15.7 142 29-174 187-335 (358)
7 PRK11272 putative DMT superfam 99.6 1.1E-13 2.4E-18 120.9 17.0 135 30-169 149-287 (292)
8 KOG4314 Predicted carbohydrate 99.6 9.1E-15 2E-19 122.3 8.3 161 1-177 117-286 (290)
9 TIGR00950 2A78 Carboxylate/Ami 99.5 3.7E-13 8E-18 114.1 14.9 127 29-162 126-259 (260)
10 TIGR00817 tpt Tpt phosphate/ph 99.4 3E-13 6.4E-18 118.3 8.9 142 29-170 143-296 (302)
11 PRK15430 putative chlorampheni 99.3 8.3E-11 1.8E-15 103.0 15.0 79 93-172 212-290 (296)
12 PTZ00343 triose or hexose phos 99.3 3.2E-11 6.9E-16 108.5 11.3 138 29-167 192-348 (350)
13 COG0697 RhaT Permeases of the 99.3 1.7E-10 3.8E-15 97.7 15.0 132 29-168 152-288 (292)
14 TIGR03340 phn_DUF6 phosphonate 99.2 8.2E-11 1.8E-15 102.1 11.6 131 30-164 143-280 (281)
15 PF00892 EamA: EamA-like trans 99.2 2.1E-10 4.5E-15 85.7 9.6 109 52-166 17-125 (126)
16 PF03151 TPT: Triose-phosphate 99.0 3.2E-08 7E-13 77.6 14.3 132 32-164 1-150 (153)
17 KOG4510 Permease of the drug/m 98.9 1.1E-09 2.3E-14 95.5 3.7 159 2-170 162-328 (346)
18 PF08449 UAA: UAA transporter 98.9 3.8E-08 8.2E-13 86.6 13.4 163 2-171 129-301 (303)
19 COG5006 rhtA Threonine/homoser 98.9 6.4E-08 1.4E-12 83.8 13.6 134 30-170 147-285 (292)
20 COG2510 Predicted membrane pro 98.8 4.6E-08 9.9E-13 76.7 9.8 128 33-167 5-139 (140)
21 TIGR03340 phn_DUF6 phosphonate 98.8 2.3E-07 4.9E-12 80.6 15.3 129 33-168 3-136 (281)
22 TIGR00776 RhaT RhaT L-rhamnose 98.8 2E-07 4.3E-12 81.9 13.4 127 30-168 151-289 (290)
23 PRK02971 4-amino-4-deoxy-L-ara 98.7 1.4E-07 3E-12 74.1 10.1 74 97-170 50-125 (129)
24 KOG2766 Predicted membrane pro 98.7 2.6E-08 5.6E-13 86.5 5.7 152 1-166 142-298 (336)
25 PRK15430 putative chlorampheni 98.6 1E-06 2.2E-11 77.1 14.7 136 28-167 5-145 (296)
26 PF13536 EmrE: Multidrug resis 98.5 9E-07 1.9E-11 67.1 9.6 77 93-170 33-109 (113)
27 TIGR00688 rarD rarD protein. T 98.5 5.1E-06 1.1E-10 70.9 14.3 133 31-167 2-142 (256)
28 PRK15051 4-amino-4-deoxy-L-ara 98.4 5.6E-06 1.2E-10 63.2 10.4 70 98-167 40-109 (111)
29 TIGR00688 rarD rarD protein. T 98.3 1E-05 2.2E-10 69.0 12.9 50 92-142 206-255 (256)
30 TIGR00950 2A78 Carboxylate/Ami 98.3 2.6E-05 5.6E-10 66.0 14.0 77 92-168 44-120 (260)
31 PLN00411 nodulin MtN21 family 98.3 2.3E-05 5E-10 71.1 14.1 127 34-166 16-155 (358)
32 TIGR00817 tpt Tpt phosphate/ph 98.1 9.3E-05 2E-09 64.7 13.8 75 91-166 62-136 (302)
33 PF04142 Nuc_sug_transp: Nucle 98.1 8E-05 1.7E-09 64.3 12.9 153 2-158 82-244 (244)
34 COG0697 RhaT Permeases of the 98.0 0.00039 8.5E-09 58.7 15.8 77 96-172 71-148 (292)
35 PTZ00343 triose or hexose phos 98.0 0.00018 4E-09 64.8 14.1 76 92-168 112-187 (350)
36 PRK11272 putative DMT superfam 98.0 0.00043 9.3E-09 60.4 15.8 123 37-168 14-142 (292)
37 PRK11453 O-acetylserine/cystei 97.8 0.00078 1.7E-08 59.0 14.2 72 97-168 61-133 (299)
38 PRK11689 aromatic amino acid e 97.8 0.00085 1.8E-08 58.7 14.0 126 31-168 4-138 (295)
39 TIGR00803 nst UDP-galactose tr 97.7 0.00056 1.2E-08 57.3 10.9 60 105-164 162-221 (222)
40 PF06027 DUF914: Eukaryotic pr 97.6 0.0012 2.5E-08 59.7 13.1 76 94-170 79-154 (334)
41 PRK09541 emrE multidrug efflux 97.6 0.00078 1.7E-08 51.5 9.6 67 103-169 38-105 (110)
42 PRK10452 multidrug efflux syst 97.5 0.00076 1.7E-08 52.4 9.1 69 102-170 37-106 (120)
43 COG2962 RarD Predicted permeas 97.5 0.0035 7.6E-08 55.5 13.0 133 35-170 152-286 (293)
44 KOG1441 Glucose-6-phosphate/ph 97.4 0.00044 9.6E-09 62.0 7.4 153 2-173 148-313 (316)
45 PRK11431 multidrug efflux syst 97.4 0.0028 6.1E-08 48.1 9.9 65 104-168 38-103 (105)
46 PRK10650 multidrug efflux syst 97.3 0.0032 6.9E-08 48.2 9.8 62 105-166 45-107 (109)
47 TIGR00776 RhaT RhaT L-rhamnose 97.3 0.013 2.8E-07 51.4 14.9 129 32-170 2-139 (290)
48 COG2076 EmrE Membrane transpor 97.3 0.0032 7E-08 48.0 9.2 65 105-169 40-105 (106)
49 KOG2234 Predicted UDP-galactos 97.2 0.0084 1.8E-07 54.3 13.0 135 26-172 178-327 (345)
50 COG2962 RarD Predicted permeas 97.2 0.0049 1.1E-07 54.5 11.2 135 29-166 5-143 (293)
51 KOG3912 Predicted integral mem 97.1 0.0089 1.9E-07 53.1 11.5 161 2-166 151-333 (372)
52 PF08449 UAA: UAA transporter 96.9 0.048 1E-06 47.9 15.0 76 94-170 64-139 (303)
53 PF06800 Sugar_transport: Suga 96.7 0.015 3.2E-07 51.1 9.6 143 2-164 115-268 (269)
54 PF00893 Multi_Drug_Res: Small 96.6 0.0093 2E-07 43.9 7.0 55 104-158 38-93 (93)
55 PF04142 Nuc_sug_transp: Nucle 96.4 0.033 7.2E-07 48.0 9.7 77 95-172 18-94 (244)
56 KOG1580 UDP-galactose transpor 96.1 0.011 2.4E-07 51.5 5.3 133 29-167 170-313 (337)
57 PRK10532 threonine and homoser 96.0 0.27 5.8E-06 42.9 13.6 123 28-166 9-136 (293)
58 KOG1582 UDP-galactose transpor 95.7 0.049 1.1E-06 48.3 7.8 85 89-174 255-339 (367)
59 KOG4510 Permease of the drug/m 95.5 0.0074 1.6E-07 53.3 2.0 80 87-170 92-172 (346)
60 KOG1442 GDP-fucose transporter 95.3 0.0092 2E-07 52.8 1.9 145 29-175 183-335 (347)
61 KOG1581 UDP-galactose transpor 95.2 0.25 5.5E-06 44.2 10.6 79 92-171 239-317 (327)
62 PF10639 UPF0546: Uncharacteri 95.2 0.083 1.8E-06 40.7 6.7 60 105-164 51-111 (113)
63 PRK13499 rhamnose-proton sympo 95.0 0.67 1.4E-05 42.2 13.0 137 28-167 4-153 (345)
64 PF05653 Mg_trans_NIPA: Magnes 94.8 0.073 1.6E-06 47.3 6.0 60 107-166 62-121 (300)
65 KOG1443 Predicted integral mem 94.6 0.93 2E-05 40.9 12.4 144 2-165 149-313 (349)
66 KOG1441 Glucose-6-phosphate/ph 93.6 0.19 4.1E-06 45.2 6.2 91 78-170 68-158 (316)
67 KOG2765 Predicted membrane pro 93.6 0.26 5.7E-06 45.3 7.1 74 98-172 163-236 (416)
68 KOG4314 Predicted carbohydrate 93.0 0.17 3.6E-06 43.2 4.6 64 107-170 65-128 (290)
69 PF06800 Sugar_transport: Suga 92.3 0.92 2E-05 40.0 8.5 82 92-174 43-129 (269)
70 KOG1583 UDP-N-acetylglucosamin 91.5 1.2 2.7E-05 39.6 8.4 70 92-166 240-313 (330)
71 PRK13499 rhamnose-proton sympo 91.2 9.8 0.00021 34.7 14.2 61 107-168 272-342 (345)
72 PF04657 DUF606: Protein of un 90.8 6.8 0.00015 30.8 12.5 64 100-164 70-138 (138)
73 PF11742 DUF3302: Protein of u 90.7 1.4 3.1E-05 31.7 6.6 57 31-88 6-74 (78)
74 KOG2922 Uncharacterized conser 89.1 0.19 4.1E-06 45.3 1.3 65 120-184 89-153 (335)
75 PF05653 Mg_trans_NIPA: Magnes 87.9 1.8 3.9E-05 38.5 6.7 81 92-173 211-298 (300)
76 COG3238 Uncharacterized protei 85.8 11 0.00024 30.4 9.6 48 121-168 96-147 (150)
77 PF06379 RhaT: L-rhamnose-prot 84.1 27 0.00059 31.9 12.3 137 28-168 4-154 (344)
78 COG4975 GlcU Putative glucose 83.1 0.38 8.2E-06 42.2 0.0 145 2-166 129-284 (288)
79 PF07857 DUF1632: CEO family ( 81.8 19 0.0004 31.5 10.1 59 108-166 61-133 (254)
80 KOG2922 Uncharacterized conser 79.4 23 0.00049 32.2 9.9 94 76-174 213-313 (335)
81 KOG2234 Predicted UDP-galactos 78.5 6 0.00013 36.1 6.1 61 107-167 104-164 (345)
82 KOG3912 Predicted integral mem 76.5 8.7 0.00019 34.6 6.4 64 104-167 95-158 (372)
83 KOG1444 Nucleotide-sugar trans 76.1 14 0.0003 33.3 7.7 77 92-169 226-302 (314)
84 COG4975 GlcU Putative glucose 75.2 3.8 8.2E-05 36.1 3.7 86 92-178 57-147 (288)
85 PF04342 DUF486: Protein of un 73.3 5.8 0.00012 30.3 3.9 30 137-166 78-107 (108)
86 COG5070 VRG4 Nucleotide-sugar 71.6 23 0.00049 31.0 7.6 90 65-157 192-286 (309)
87 KOG1444 Nucleotide-sugar trans 70.8 71 0.0015 28.9 10.8 55 113-167 95-149 (314)
88 COG3086 RseC Positive regulato 66.3 9.5 0.00021 30.7 3.9 50 120-171 73-127 (150)
89 PRK02237 hypothetical protein; 66.0 13 0.00028 28.5 4.4 38 132-169 70-107 (109)
90 COG3169 Uncharacterized protei 64.6 27 0.00058 26.6 5.8 56 106-167 60-115 (116)
91 PF02694 UPF0060: Uncharacteri 64.5 14 0.0003 28.2 4.4 38 132-169 68-105 (107)
92 KOG1583 UDP-N-acetylglucosamin 60.2 13 0.00028 33.3 4.0 45 131-175 101-145 (330)
93 COG2443 Sss1 Preprotein transl 54.9 2.9 6.3E-05 29.1 -0.7 20 175-194 16-35 (65)
94 PRK15015 carbon starvation pro 50.9 86 0.0019 31.3 8.3 63 98-167 173-238 (701)
95 PF01350 Flavi_NS4A: Flaviviru 47.1 1.1E+02 0.0024 24.6 7.0 80 86-173 43-122 (144)
96 KOG2489 Transmembrane protein 45.9 73 0.0016 30.8 6.7 71 30-109 439-516 (592)
97 KOG1766 Enhancer of rudimentar 42.3 12 0.00026 28.1 0.8 16 189-204 76-91 (104)
98 PF05977 MFS_3: Transmembrane 39.1 3.5E+02 0.0077 25.8 13.2 58 131-188 356-413 (524)
99 KOG1442 GDP-fucose transporter 37.3 13 0.00027 33.4 0.3 57 113-169 120-176 (347)
100 KOG4831 Unnamed protein [Funct 36.1 56 0.0012 25.2 3.6 39 127-165 85-123 (125)
101 PF06966 DUF1295: Protein of u 35.7 77 0.0017 26.9 4.9 23 144-166 114-136 (235)
102 TIGR00327 secE_euk_arch protei 33.6 11 0.00023 26.0 -0.6 24 171-194 7-30 (61)
103 PF05961 Chordopox_A13L: Chord 33.5 41 0.00089 23.6 2.3 18 30-47 7-24 (68)
104 PRK09400 secE preprotein trans 32.3 12 0.00026 25.6 -0.5 24 171-194 11-34 (61)
105 PTZ00478 Sec superfamily; Prov 30.5 14 0.0003 26.8 -0.4 24 171-194 24-47 (81)
106 PRK09577 multidrug efflux prot 30.0 2.8E+02 0.0061 28.9 8.7 48 118-166 885-935 (1032)
107 COG3856 Sbp Uncharacterized co 29.7 2.5E+02 0.0055 21.3 7.6 78 85-166 20-97 (113)
108 PRK09579 multidrug efflux prot 28.0 3.3E+02 0.0071 28.4 8.8 48 118-166 864-914 (1017)
109 PF01133 ER: Enhancer of rudim 26.2 30 0.00065 26.2 0.7 19 186-204 73-91 (102)
110 COG4709 Predicted membrane pro 25.7 3.5E+02 0.0075 22.9 6.9 16 150-165 151-166 (195)
111 TIGR02921 PEP_integral PEP-CTE 25.5 7.1E+02 0.015 25.1 11.8 130 31-166 114-262 (952)
112 PHA03049 IMV membrane protein; 23.5 78 0.0017 22.1 2.3 18 30-47 7-24 (68)
113 PF04156 IncA: IncA protein; 23.4 3.9E+02 0.0085 21.4 7.2 17 152-168 47-63 (191)
114 COG1742 Uncharacterized conser 23.3 1.3E+02 0.0028 23.0 3.6 39 132-170 69-107 (109)
115 COG5070 VRG4 Nucleotide-sugar 22.0 5.5E+02 0.012 22.6 8.5 61 113-173 86-146 (309)
116 PF11118 DUF2627: Protein of u 21.6 2.1E+02 0.0046 20.5 4.3 18 149-166 41-58 (77)
117 KOG1330 Sugar transporter/spin 21.4 6.8E+02 0.015 24.2 8.8 108 54-167 250-365 (493)
No 1
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=3.9e-33 Score=248.64 Aligned_cols=165 Identities=39% Similarity=0.667 Sum_probs=148.8
Q ss_pred CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--------CC-CccchHHHHHHHHHHHHHHHHH
Q 039155 1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--------GR-RKLDMQKLVGCIGLFTLVALWW 71 (206)
Q Consensus 1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--------~~-~~~~~~~~~g~vgl~~~l~l~p 71 (206)
|+||++++.+|....| +..++++++||+++++||++||+|+ ++ +|+|++++||++|+|+++.+||
T Consensus 223 i~GViiVt~~~s~~~~------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP 296 (416)
T KOG2765|consen 223 IAGVIIVTMGDSKQNS------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWP 296 (416)
T ss_pred hccEEEEEeccccccc------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhH
Confidence 6899999999875422 2345678999999999999999999 34 6899999999999999999999
Q ss_pred HHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155 72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY 151 (206)
Q Consensus 72 ~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~ 151 (206)
++++||+++.| .|++|+.. ....++.++++.+++++|+|.+|+-+|+|+.++++++++||+|+++|.+++|.++|+.+
T Consensus 297 ~l~iL~~~~~e-~F~lP~~~-q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~ 374 (416)
T KOG2765|consen 297 PLIILDFFGEE-RFELPSST-QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY 374 (416)
T ss_pred HHHHHHHhccC-cccCCCCc-eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH
Confidence 99999999999 59999875 45667888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhheeccccchh
Q 039155 152 IIGSVQNSSQNRWIDIAEFKTI 173 (206)
Q Consensus 152 iiG~~LIl~G~~l~~~~~~~~~ 173 (206)
++|++.|++||.++++..+...
T Consensus 375 iiGsi~Ifv~Fv~vn~~~~~~~ 396 (416)
T KOG2765|consen 375 IIGSIPIFVGFVIVNISSENSK 396 (416)
T ss_pred HHHHHHHHHHHhheeccccccc
Confidence 9999999999999997755433
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.82 E-value=2.2e-19 Score=160.87 Aligned_cols=168 Identities=18% Similarity=0.257 Sum_probs=139.6
Q ss_pred CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--CC---CccchHHHHHHHHHHHHHHHHHHHHH
Q 039155 1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--GR---RKLDMQKLVGCIGLFTLVALWWLVWP 75 (206)
Q Consensus 1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~~---~~~~~~~~~g~vgl~~~l~l~p~~~i 75 (206)
++|++++...|....|++ ..++|++.||+++++||++||+|. +| ++.+...++|++|++++++.+|.+.+
T Consensus 143 i~Gv~lv~~sD~~~~~~~-----~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~i 217 (334)
T PF06027_consen 143 IAGVVLVVVSDVLSGSDS-----SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAI 217 (334)
T ss_pred HhhhhheeeecccccccC-----CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 468899999986542222 235688999999999999999998 32 34567789999999999999999999
Q ss_pred hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHH
Q 039155 76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGS 155 (206)
Q Consensus 76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~ 155 (206)
++..++| .++|+. +.+..++..++ |.++.+.+++..++++||++..++++.+.|.+.++|++++|+++++.+++|.
T Consensus 218 le~~~i~-~~~w~~--~~~~~~v~~~~-~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af 293 (334)
T PF06027_consen 218 LERSGIE-SIHWTS--QVIGLLVGYAL-CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAF 293 (334)
T ss_pred eehhhhh-ccCCCh--hhHHHHHHHHH-HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHH
Confidence 9999999 487754 45554444444 6778888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhheeccccchhhhhh
Q 039155 156 VQNSSQNRWIDIAEFKTIITTC 177 (206)
Q Consensus 156 ~LIl~G~~l~~~~~~~~~~~~~ 177 (206)
++|++|+.+-+..+.++.++.+
T Consensus 294 ~lIiiG~vvy~~~~~~~~~~~~ 315 (334)
T PF06027_consen 294 ALIIIGFVVYNLAESPEEEARR 315 (334)
T ss_pred HHHHHHhheEEccCCcccccch
Confidence 9999999999977665554433
No 3
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.69 E-value=9.2e-16 Score=134.12 Aligned_cols=133 Identities=10% Similarity=-0.008 Sum_probs=104.1
Q ss_pred CchhHHHHHHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFV 103 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~ 103 (206)
...|+++++++|++||.|. + .++.+.... .+..+++.+++.|+... .+.+ .+.+...|..++++|++
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~----~~~~~~~~~~~l~lgv~ 217 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGAL---QAGE----ALWHWSILPLGLAVAIL 217 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHH---ccCc----ccCCHHHHHHHHHHHHH
Confidence 3579999999999999998 1 123332222 23445555555554432 1111 12234567778899999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
||++++.+|++++++.+|+.+|+..+++|+++.+.+++++||++++.+++|+++|+.|........
T Consensus 218 ~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 218 STALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999987553
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.61 E-value=1.1e-14 Score=127.48 Aligned_cols=138 Identities=12% Similarity=0.065 Sum_probs=100.4
Q ss_pred CchhHHHHHHHHHHHHHhc---CC--Cccc---hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc--c-cCCCCHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---GR--RKLD---MQKLVGCIGLFTLVALWWLVWPLTAMGIEPK--F-AFPHSAKTAEII 97 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~~--~~~~---~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~--~-~~P~~~~~w~~l 97 (206)
+..||+++++++++||+|. ++ ++.+ ...+..+.++.+. .|........+-+.. . ..+.+.+.|..+
T Consensus 141 ~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 217 (299)
T PRK11453 141 AMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPI---IPFFVASLILDGSATMIHSLVTIDMTTILSL 217 (299)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHH---HHHHHHHHHhcCchhhhhhhccCCHHHHHHH
Confidence 3579999999999999999 11 1221 1111112222222 222221111111100 0 012345789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
+++|++++++++.+|++++++.+|..+++..+++|+++.+.+++++||.+++.+++|+++|+.|+++..+++
T Consensus 218 ~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 218 MYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999999999999999999999999999999999999999999999999999887654
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.60 E-value=1.7e-14 Score=126.31 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=97.6
Q ss_pred CchhHHHHHHHHHHHHHhc---CC--CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---GR--RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFV 103 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~~--~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~ 103 (206)
...||++++++|++||+|. ++ ++.+....... ...+.+++.... .+ + ...+.+.+.|..+++.++
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~~---~~~~~l~~~~~~---~~-~--~~~~~~~~~~~~l~~~~~- 223 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFFI---LTALALWIKYFL---SP-Q--PAMVFSLPAIIKLLLAAA- 223 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHHH---HHHHHHHHHHHH---hc-C--ccccCCHHHHHHHHHHHH-
Confidence 3579999999999999999 21 23332221111 112222222221 11 2 122234467888888885
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
++.+++++|++++++.+|+.+++..+++|+++.+.+++++||++++.+++|+++|+.|+++....+
T Consensus 224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 799999999999999999999999999999999999999999999999999999999998887543
No 6
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.58 E-value=5.3e-14 Score=127.24 Aligned_cols=142 Identities=10% Similarity=0.046 Sum_probs=97.9
Q ss_pred CchhHHHHHHHHHHHHHhc---CC--CccchH-HHHHHHHHHHHHHHHHHHHHhhhcCCCC-cccCCCCHHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---GR--RKLDMQ-KLVGCIGLFTLVALWWLVWPLTAMGIEP-KFAFPHSAKTAEIIIANG 101 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~~--~~~~~~-~~~g~vgl~~~l~l~p~~~il~~~g~e~-~~~~P~~~~~w~~ll~lg 101 (206)
..+|+++++++|++||+|. ++ .+++.. ....+.++++.+...++... ..+.+. ......+.. +..+++.+
T Consensus 187 ~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~-~~~i~y~~ 263 (358)
T PLN00411 187 WLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLV--VEKNNPSVWIIHFDIT-LITIVTMA 263 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHH--HccCCcccceeccchH-HHHHHHHH
Confidence 3679999999999999998 11 233211 21222222222222222221 111110 001111112 33477788
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhh
Q 039155 102 FVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTII 174 (206)
Q Consensus 102 l~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~ 174 (206)
++ +.+++++|++++++.+|+.++++.+++|+++++.+++++||++++.+++|+++|++|++++.+++.||.+
T Consensus 264 i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~ 335 (358)
T PLN00411 264 II-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK 335 (358)
T ss_pred HH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 76 5689999999999999999999999999999999999999999999999999999999999977665543
No 7
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.58 E-value=1.1e-13 Score=120.86 Aligned_cols=135 Identities=12% Similarity=-0.002 Sum_probs=102.4
Q ss_pred chhHHHHHHHHHHHHHhc---CC-CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHH
Q 039155 30 LVGDLFALLSAMTYGLFT---GR-RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGN 105 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~---~~-~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~s 105 (206)
..|++++++++++||.|. ++ ++.+......+...++.+.+.|.... .+ ++ ....++...|..+++++++++
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-~~~~~~~~~~~~i~~l~i~~s 223 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLL---SG-ER-LTALPTLSGFLALGYLAVFGS 223 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHH---cC-Cc-ccccCCHHHHHHHHHHHHHHH
Confidence 579999999999999999 21 11111112222223344444443332 11 11 212223467999999999999
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 106 FVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 106 vl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
++++.+|++++++.++..+++..+++|+++++.+++++||++++.+++|+++|+.|+++.+..+
T Consensus 224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987543
No 8
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.56 E-value=9.1e-15 Score=122.33 Aligned_cols=161 Identities=17% Similarity=0.283 Sum_probs=138.3
Q ss_pred CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--------CCCccchHHHHHHHHHHHHHHHHHH
Q 039155 1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--------GRRKLDMQKLVGCIGLFTLVALWWL 72 (206)
Q Consensus 1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--------~~~~~~~~~~~g~vgl~~~l~l~p~ 72 (206)
+.|+++++|.|... ..+..|...+++||.+-|+|. +..--+...++++.|++++.+.|.+
T Consensus 117 I~GiVmiay~DN~~------------a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~ 184 (290)
T KOG4314|consen 117 IGGIVMIAYADNEH------------ADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFP 184 (290)
T ss_pred hCcEEEEEeccchh------------hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhh
Confidence 47999999998753 235899999999999999999 2333567889999999999999988
Q ss_pred HHHhhhcCCCCccc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155 73 VWPLTAMGIEPKFA-FPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY 151 (206)
Q Consensus 73 ~~il~~~g~e~~~~-~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~ 151 (206)
.+++.++|.|. .+ +. ..+|+-+++.+.+ ++-.+++.|+++.++.|...|+++.+.+|..+.+|.++.+-.++...
T Consensus 185 ~lIL~~T~VE~-~qsFA--~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~ 260 (290)
T KOG4314|consen 185 ALILAFTGVEH-LQSFA--AAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLF 260 (290)
T ss_pred HHHHHHhchHH-HHHHh--hCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHH
Confidence 88899999994 33 22 2478989888887 78889999999999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHhhheeccccchhhhhh
Q 039155 152 IIGSVQNSSQNRWIDIAEFKTIITTC 177 (206)
Q Consensus 152 iiG~~LIl~G~~l~~~~~~~~~~~~~ 177 (206)
+.|..+|+.||++...++.|+-...|
T Consensus 261 La~T~iI~i~FiLiiiP~d~~eI~~~ 286 (290)
T KOG4314|consen 261 LAATCIICIGFILIIIPEDKDEIGGN 286 (290)
T ss_pred HHHHHHHHHhHHheecccchhhccce
Confidence 99999999999999988776544433
No 9
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.52 E-value=3.7e-13 Score=114.14 Aligned_cols=127 Identities=19% Similarity=0.251 Sum_probs=100.3
Q ss_pred CchhHHHHHHHHHHHHHhc---C--CCccc--hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---G--RRKLD--MQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANG 101 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~--~~~~~--~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lg 101 (206)
...|++++++++++|+.|. + .++.+ ...+.....+++.++++|.... .+.+ ... +.+.|..+++.+
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~--~~~--~~~~~~~~~~~~ 198 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWF---LGPN--PQA--LSLQWGALLYLG 198 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHh---cCCC--CCc--chHHHHHHHHHH
Confidence 4689999999999999999 1 12233 2223323445566666555443 2211 222 346788899999
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHh
Q 039155 102 FVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQN 162 (206)
Q Consensus 102 l~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~ 162 (206)
++++++++.+|+++++++++..+++..+++|+++++.++++++|++++.+++|.++++.|+
T Consensus 199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 10
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.44 E-value=3e-13 Score=118.28 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=99.0
Q ss_pred CchhHHHHHHHHHHHHHhc---C----CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCC--cccC---CCCHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---G----RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEP--KFAF---PHSAKTAEI 96 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~----~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~--~~~~---P~~~~~w~~ 96 (206)
...||+++++++++||+|. + +++++......+..+++.+.+.|+.....-.+..+ ..+. ......|..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3679999999999999998 1 12455444555666777777777665421100000 0000 000122332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 97 IIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 97 ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
.+..++.+....+.++.+++++++|+.+++..+++|+++++.+++++||++++.+++|++++++|+++.++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 33444434444455666899999999999999999999999999999999999999999999999999886543
No 11
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.30 E-value=8.3e-11 Score=103.01 Aligned_cols=79 Identities=10% Similarity=-0.048 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155 93 TAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT 172 (206)
Q Consensus 93 ~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~ 172 (206)
.|..++..++ ++.+++.+|++++++.+|..+|+..+++|+++.+.+|+++||.+++.+++|+++|++|+.+...+....
T Consensus 212 ~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~ 290 (296)
T PRK15430 212 LNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT 290 (296)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555 588999999999999999999999999999999999999999999999999999999988877554433
No 12
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.27 E-value=3.2e-11 Score=108.54 Aligned_cols=138 Identities=14% Similarity=0.102 Sum_probs=99.2
Q ss_pred CchhHHHHHHHHHHHHHhc-------CC-C----ccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCC---cccCCCCHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT-------GR-R----KLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEP---KFAFPHSAKT 93 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~-------~~-~----~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~---~~~~P~~~~~ 93 (206)
+..|++++++|++++|+|. ++ + +.+......+..+++.++++|+........... ....+.....
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 3689999999999999998 11 1 244333444556777777777766421100000 0000000112
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----HhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 94 AEIIIANGFVGNFVSDYFWAL----GVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 94 w~~ll~lgl~~svl~~~l~~~----al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
|..+++ .++++.+++++||. ++++++|...++...+.|+++.+.+++++||++++.+++|++++++|+++-++
T Consensus 272 ~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~ 348 (350)
T PTZ00343 272 KGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL 348 (350)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence 333444 35568999999995 99999999999999999999999999999999999999999999999988654
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.27 E-value=1.7e-10 Score=97.67 Aligned_cols=132 Identities=20% Similarity=0.213 Sum_probs=100.5
Q ss_pred CchhHHHHHHHHHHHHHhc---CC-CccchHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---GR-RKLDMQKLVG-CIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFV 103 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~~-~~~~~~~~~g-~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~ 103 (206)
+..|+++++++++++|+|. ++ .+.+...... +..+......++ ....+ ...|.+...|..+.+.|++
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~g~~ 223 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLL------FFLSG--FGAPILSRAWLLLLYLGVF 223 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH------HHhcc--ccccCCHHHHHHHHHHHHH
Confidence 4689999999999999988 21 1333222222 111111111111 11122 1145556788899999999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
++.+++++|.+++++.++..++...+++|+++.+.++++++|+++..+++|+.+|+.|+.+....
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999876
No 14
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.24 E-value=8.2e-11 Score=102.13 Aligned_cols=131 Identities=11% Similarity=0.079 Sum_probs=91.6
Q ss_pred chhHHHHHHHHHHHHHhc--CC---Cccch-HHHHHHHHHHHHHHH-HHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155 30 LVGDLFALLSAMTYGLFT--GR---RKLDM-QKLVGCIGLFTLVAL-WWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF 102 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~--~~---~~~~~-~~~~g~vgl~~~l~l-~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl 102 (206)
..|+.++++++++|++|. .+ ++.+. ........ ..++.. .|........+.. ...++. ..+..+++.+.
T Consensus 143 ~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~ 218 (281)
T TIGR03340 143 RKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLG-IGFLAMGWPFLLLYLKRHGR--SMFPYA-RQILPSATLGG 218 (281)
T ss_pred hhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHH-HHHHHHHHHHHHHHHHHhcc--chhhhH-HHHHHHHHHHH
Confidence 468999999999999998 22 11211 00001111 111111 2322211111111 111222 34556788888
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155 103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW 164 (206)
Q Consensus 103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l 164 (206)
+++.+++.+|++++++.++..++...+++|+++.+.+++++||+++..+++|+++|++|+++
T Consensus 219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 89999999999999999999999999999999999999999999999999999999999986
No 15
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.17 E-value=2.1e-10 Score=85.74 Aligned_cols=109 Identities=14% Similarity=0.039 Sum_probs=84.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhH
Q 039155 52 LDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLT 131 (206)
Q Consensus 52 ~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ 131 (206)
.+......+-.+++.+ +++...+....+. ... +.+.|..++..|++++.+++.+++++++++++..+++...++
T Consensus 17 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (126)
T PF00892_consen 17 ISPLSITFWRFLIAGI-LLILLLILGRKPF---KNL--SPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLS 90 (126)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHhhccccc---cCC--ChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHH
Confidence 5544444455555554 4444443222221 112 224677788889988999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 132 IPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 132 ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
|+++.+.++++++|+++..+++|.++++.|++++.
T Consensus 91 pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 91 PVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998764
No 16
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.96 E-value=3.2e-08 Score=77.60 Aligned_cols=132 Identities=20% Similarity=0.188 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHhc-------CC-----CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc-ccCCC-----CHHH
Q 039155 32 GDLFALLSAMTYGLFT-------GR-----RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPK-FAFPH-----SAKT 93 (206)
Q Consensus 32 Gd~LaLlsA~~yAlY~-------~~-----~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~-~~~P~-----~~~~ 93 (206)
|.++++.|.++.|+|. ++ .+.+....+.+.+..+++++.|+.++......++. .+.+. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7789999999999998 22 35555566678888888888888777554442210 11111 2245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155 94 AEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW 164 (206)
Q Consensus 94 w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l 164 (206)
+..++..|++ .+..++...+.++++||+..++...+-.++..+.++++++|+++..+++|.++.++|+++
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 6666777775 677888889999999999999999999999999999999999999999999999999875
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.89 E-value=1.1e-09 Score=95.47 Aligned_cols=159 Identities=15% Similarity=0.216 Sum_probs=115.0
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHH-Hhc--C--CCccc--hH-HHHHHHHHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYG-LFT--G--RRKLD--MQ-KLVGCIGLFTLVALWWLV 73 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yA-lY~--~--~~~~~--~~-~~~g~vgl~~~l~l~p~~ 73 (206)
.||++++-..-..-|+.+++++.....+..|-..++.|++.-| +|. + .++.. +. .+|+.+++ +....
T Consensus 162 ~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~l---V~s~I-- 236 (346)
T KOG4510|consen 162 LGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITL---VVSLI-- 236 (346)
T ss_pred heEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHH---HHHHH--
Confidence 5999997654322233333333333445678777777766555 566 1 12222 22 44544443 33321
Q ss_pred HHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHH
Q 039155 74 WPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYII 153 (206)
Q Consensus 74 ~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~ii 153 (206)
++.. +. .+.+|++++.|..++.+|++ .++++.+...++++-.+..+++.-+.+.++|.+.+++++||.++++.++
T Consensus 237 -~~~~--ig-~~~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~ 311 (346)
T KOG4510|consen 237 -GCAS--IG-AVQLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWV 311 (346)
T ss_pred -HHhh--cc-ceecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhh
Confidence 2222 33 37899999999999999997 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhheecccc
Q 039155 154 GSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 154 G~~LIl~G~~l~~~~~~ 170 (206)
|+++|+.+..++.+.+.
T Consensus 312 Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 312 GAVMVVSSTVWVALKKW 328 (346)
T ss_pred ceeeeehhHHHHHHHHH
Confidence 99999999998875544
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.88 E-value=3.8e-08 Score=86.58 Aligned_cols=163 Identities=20% Similarity=0.191 Sum_probs=115.7
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--C-----CCccchHHHHHHHHHHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--G-----RRKLDMQKLVGCIGLFTLVALWWLVW 74 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~-----~~~~~~~~~~g~vgl~~~l~l~p~~~ 74 (206)
+|+++.+++|...+++++. ...+...|+++.+++.++.|.+. + +.+.+....+.+..+++++..++..+
T Consensus 129 ~Gv~~~~~~~~~~~~~~~~----~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~ 204 (303)
T PF08449_consen 129 IGVAIFTLSDSSSSSSSNS----SSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLF 204 (303)
T ss_pred hhHheeeeccccccccccc----ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5888888887643221111 11222349999999999999887 1 12223334555666777777766555
Q ss_pred Hhh---hcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155 75 PLT---AMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY 151 (206)
Q Consensus 75 il~---~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~ 151 (206)
.+. ..... .+..+++ ..+..++.+.+ ++.++...+.+-++..+|+..++...+--+++.+.+++++++++++.+
T Consensus 205 ~l~~~~~~~~~-~f~~~~p-~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~ 281 (303)
T PF08449_consen 205 LLPTGEFRSAI-RFISAHP-SVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQ 281 (303)
T ss_pred HHHhhHhhHHH-HHHHHhH-HHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHH
Confidence 532 11111 1222222 35666666666 478888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhheeccccc
Q 039155 152 IIGSVQNSSQNRWIDIAEFK 171 (206)
Q Consensus 152 iiG~~LIl~G~~l~~~~~~~ 171 (206)
++|.+++++|..+-...++|
T Consensus 282 ~~G~~lv~~g~~~~~~~~~k 301 (303)
T PF08449_consen 282 WIGIVLVFAGIFLYSYAKKK 301 (303)
T ss_pred HHHHHHhHHHHHHHHHhhcc
Confidence 99999999999988766554
No 19
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.86 E-value=6.4e-08 Score=83.78 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=99.5
Q ss_pred chhHHHHHHHHHHHHHhc---CC-CccchH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHH
Q 039155 30 LVGDLFALLSAMTYGLFT---GR-RKLDMQ-KLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVG 104 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~---~~-~~~~~~-~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~ 104 (206)
..|..+++.++.||++|+ ++ .+.+-. .=.+.--+.+.++..|+-+. .-++.+.-| .....-+..|+++
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~vAaviv~Pig~~----~ag~~l~~p---~ll~laLgvavlS 219 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLVAALIVLPIGAA----QAGPALFSP---SLLPLALGVAVLS 219 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHHHHHHHhhhhhh----hcchhhcCh---HHHHHHHHHHHHh
Confidence 689999999999999999 21 211111 11111124455555555442 122213233 3445568899999
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 105 NFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 105 svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
|++-|.+-+.++++.++-.=++.+++||.++++.+++++||++|+.+++|.++|+++..-.....+
T Consensus 220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~ 285 (292)
T COG5006 220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTAR 285 (292)
T ss_pred cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccC
Confidence 999999999999999999999999999999999999999999999999999999998876555444
No 20
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.80 E-value=4.6e-08 Score=76.74 Aligned_cols=128 Identities=18% Similarity=0.120 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhc-----CCCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC--CCHHHHHHHHHHHHHHH
Q 039155 33 DLFALLSAMTYGLFT-----GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFP--HSAKTAEIIIANGFVGN 105 (206)
Q Consensus 33 d~LaLlsA~~yAlY~-----~~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P--~~~~~w~~ll~lgl~~s 105 (206)
.+.+++||+++++=. .-+.+|..+....-.+....+++.++. ..|.- +.| -+.+.|.+++..|+ .+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~---~~g~~---~~~~~~~~k~~lflilSGl-a~ 77 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLL---VTGNW---QAGGEIGPKSWLFLILSGL-AG 77 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHH---hcCce---ecccccCcceehhhhHHHH-HH
Confidence 467899999999866 223343222222222333333322222 23322 122 12378999999996 68
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 106 FVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 106 vl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
.+++.++.+|++.=.+..+.-.=.+.|.++.++++++++|+++..+++|.+||.+|..++.+
T Consensus 78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999988888899999999999999999999999999999999988754
No 21
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.80 E-value=2.3e-07 Score=80.56 Aligned_cols=129 Identities=12% Similarity=-0.072 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHhc---CC--CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHH
Q 039155 33 DLFALLSAMTYGLFT---GR--RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFV 107 (206)
Q Consensus 33 d~LaLlsA~~yAlY~---~~--~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl 107 (206)
.++.+++|++||... ++ ++.+. +.........+.+.|....- ..+.+ ...| ..+.|. .+..+.++...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-~~~~~--~~~~-~~~~~~-~~~~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPD--FLWWALLAHSVLLTPYGLWY-LAQVG--WSRL-PATFWL-LLAISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhH--HHHHHHHHHHHHHHHHHHHh-cccCC--CCCc-chhhHH-HHHHHHHHHHH
Confidence 367899999999988 21 22111 12222344555555544421 01111 1222 223343 44445556888
Q ss_pred HHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 108 SDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 108 ~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
.+.++.++++++++..+++..+.+|+++++.++++++|+++..+++|.++++.|+.++..+
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999987643
No 22
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.75 E-value=2e-07 Score=81.90 Aligned_cols=127 Identities=12% Similarity=0.114 Sum_probs=91.9
Q ss_pred chhHHHHHHHHHHHHHhc---C---CCccchHHHH-HHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155 30 LVGDLFALLSAMTYGLFT---G---RRKLDMQKLV-GCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF 102 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~---~---~~~~~~~~~~-g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl 102 (206)
..|.+++++|+++|+.|. + .+..+..... ..+.+.+++++.|. ....+ ++ ....|..++ .|+
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~---~~-~~~~~~~~~-~Gi 219 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAFGVDGLSVLLPQAIGMVIGGIIFNLGH------ILAKP---LK-KYAILLNIL-PGL 219 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCcceehhHHHHHHHHHHHHHHHHH------hcccc---hH-HHHHHHHHH-HHH
Confidence 569999999999999999 2 2223322112 11222333333221 00021 11 223454444 888
Q ss_pred HHHHHHHHHHHHHhh-hhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHH----HHHHHHHHHhhheecc
Q 039155 103 VGNFVSDYFWALGVV-RTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYI----IGSVQNSSQNRWIDIA 168 (206)
Q Consensus 103 ~~svl~~~l~~~al~-~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~i----iG~~LIl~G~~l~~~~ 168 (206)
+ ..+++.++..+.+ +.++..+++.-.++|+.+.+.+++++||+.++.++ +|.++|+.|..+....
T Consensus 220 ~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 220 M-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred H-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 8 7999999999999 99999999999999999999999999999999999 9999999999887543
No 23
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.71 E-value=1.4e-07 Score=74.10 Aligned_cols=74 Identities=18% Similarity=0.140 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHH--HcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 97 IIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMF--IHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 97 ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i--~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
.+++|++|..+++++|++++++.+...+.-...+.+.+..+.++. ++||++++.+++|.++|++|+++++++++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 578899999999999999999999999999999988888888874 78999999999999999999999987654
No 24
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.69 E-value=2.6e-08 Score=86.46 Aligned_cols=152 Identities=13% Similarity=0.161 Sum_probs=112.1
Q ss_pred CeeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--CC---CccchHHHHHHHHHHHHHHHHHHHHH
Q 039155 1 MAGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--GR---RKLDMQKLVGCIGLFTLVALWWLVWP 75 (206)
Q Consensus 1 ~~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~~---~~~~~~~~~g~vgl~~~l~l~p~~~i 75 (206)
+.||+++..+|--.-| .+.++|+..||.+++.+|-+||+-. +| ++.|...++|++|+|+.++...- ++
T Consensus 142 i~GvvmvV~sDV~agd------~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i 214 (336)
T KOG2766|consen 142 IVGVVMVVFSDVHAGD------RAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FI 214 (336)
T ss_pred ecceEEEEEeeecccc------ccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-Hh
Confidence 4688888888854322 2345789999999999999999876 22 56778889999999999998655 33
Q ss_pred hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHH
Q 039155 76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGS 155 (206)
Q Consensus 76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~ 155 (206)
....+.. ..+|- ++...++. .++ |-++-+.+...-+|..|+|...++++..-.-+.++ -.+|-+.++.+++..
T Consensus 215 ~~~~~~~-tl~w~--~~i~~yl~-f~L-~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF 287 (336)
T KOG2766|consen 215 FERHHVS-TLHWD--SAIFLYLR-FAL-TMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAF 287 (336)
T ss_pred hhcccee-eEeeh--HHHHHHHH-HHH-HHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHH
Confidence 2223333 24332 23333333 333 45667777789999999999999998888778887 555888999999999
Q ss_pred HHHHHHhhhee
Q 039155 156 VQNSSQNRWID 166 (206)
Q Consensus 156 ~LIl~G~~l~~ 166 (206)
+.+..|+++-.
T Consensus 288 ~~i~~GliiYs 298 (336)
T KOG2766|consen 288 ATIATGLIIYS 298 (336)
T ss_pred HHHHHhhEEee
Confidence 99999998864
No 25
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.64 E-value=1e-06 Score=77.13 Aligned_cols=136 Identities=10% Similarity=0.016 Sum_probs=97.2
Q ss_pred CCchhHHHHHHHHHHHHHhc---C-CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccC-CCCHHHHHHHHHHHH
Q 039155 28 HYLVGDLFALLSAMTYGLFT---G-RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAF-PHSAKTAEIIIANGF 102 (206)
Q Consensus 28 ~~~lGd~LaLlsA~~yAlY~---~-~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~-P~~~~~w~~ll~lgl 102 (206)
+...|++++++++++|+..- + .++++......+-.+++.+++.|..... -+.+ .... ..+++.+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~~~~~~~~~~~~R~~~a~~~l~~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSIC--RQWS-YLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH--ccHH-HHHHHHcCHHHHH-HHHHHH
Confidence 34689999999999999866 1 2335544444455555666555444321 1111 0000 01223333 233555
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
++....+.++.+|++++++..+++..++.|++.++.++++++|+++..+++|.++.++|+.++..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999999999999999999999999999999999998753
No 26
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.53 E-value=9e-07 Score=67.09 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 93 TAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 93 ~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
.|..++..|+++...++.++.+|+++.++ .+++...+.|+++++.++++++|+++...++|.+++++|+.++..++.
T Consensus 33 ~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 33 PWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 44445666676666889999999999995 777999999999999999999999999999999999999999987654
No 27
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.49 E-value=5.1e-06 Score=70.90 Aligned_cols=133 Identities=12% Similarity=0.107 Sum_probs=94.5
Q ss_pred hhHHHHHHHHHHHHHhc---CC-CccchHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCcccCCCCHHHHHHHHHHHH
Q 039155 31 VGDLFALLSAMTYGLFT---GR-RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGI----EPKFAFPHSAKTAEIIIANGF 102 (206)
Q Consensus 31 lGd~LaLlsA~~yAlY~---~~-~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~----e~~~~~P~~~~~w~~ll~lgl 102 (206)
.|.+++++++++|+.-- +. +.++......+=++++.+++.+..... ... + ....++..+.+..+...|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~~~~~~~~i~~~R~~~a~~~l~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLLKPLPATDILGHRMIWSFPFMLLSVTLF--RQWAALIE-RLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH--cchHHHHH-HHhCcccchHHHHHHHHHH
Confidence 48899999999999765 21 235544444455566666654433221 111 1 1111111122344555555
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
+ ...++.++.+|++++++..+++...+.|.++++.++++++|+++..+++|.++.++|+.++..
T Consensus 79 ~-~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 79 L-IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred H-HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 4 678889999999999999999999999999999999999999999999999999999987754
No 28
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.36 E-value=5.6e-06 Score=63.25 Aligned_cols=70 Identities=14% Similarity=0.051 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
...++++-.++.++|.++++..+...+.....+.+..+++.+++++||++++.+++|.++|++|+.++..
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3444566788999999999999999999999999999999999999999999999999999999987653
No 29
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.35 E-value=1e-05 Score=69.04 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHH
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI 142 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~ 142 (206)
..|..++..|++ +.+++.+|++++++.+|+.+++..+++|+++.+.++++
T Consensus 206 ~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 206 PIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 478888888886 89999999999999999999999999999999998764
No 30
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.29 E-value=2.6e-05 Score=66.00 Aligned_cols=77 Identities=14% Similarity=0.013 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
+.|...+..|.++..+.+.++.+|++++++..+++...++|.++++.++++++|+++..+++|.++.++|+.++..+
T Consensus 44 ~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 44 KRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSD 120 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccC
Confidence 45556777777788899999999999999999999999999999999999999999999999999999999887643
No 31
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.28 E-value=2.3e-05 Score=71.12 Aligned_cols=127 Identities=14% Similarity=0.130 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHhc------CCCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCC-CHHHHHHHHHHHHHHHH
Q 039155 34 LFALLSAMTYGLFT------GRRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPH-SAKTAEIIIANGFVGNF 106 (206)
Q Consensus 34 ~LaLlsA~~yAlY~------~~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~-~~~~w~~ll~lgl~~sv 106 (206)
+.++..=++|+.+. -+.-++...+..+-..++.++++|+.... +.....|. +++.|..+...|++. .
T Consensus 16 ~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~-----~~~~~~~~~~~~~~~~l~l~g~~g-~ 89 (358)
T PLN00411 16 TAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT-----NRSRSLPPLSVSILSKIGLLGFLG-S 89 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH-----HHhcccCcchHHHHHHHHHHHHHH-H
Confidence 34444556666665 11223322334444556666666665541 10011232 345677777788875 5
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHH------cCcCccHHHHHHHHHHHHHhhhee
Q 039155 107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFI------HHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~------~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
+.+.++++++++++|+.+++..++.|.++++.++++ ++|+++..+++|.++-++|+.++.
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 666789999999999999999999999999999999 699999999999999999998765
No 32
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.10 E-value=9.3e-05 Score=64.68 Aligned_cols=75 Identities=4% Similarity=0.041 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 91 AKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 91 ~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
.+.|..++..|++ ..+.+.+++++++++++..+++...++|+++++.++++++|+++..+++|.+++++|+.+..
T Consensus 62 ~~~~~~~~~~g~~-~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 62 SALLKLLLPVAIV-HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 4678888888887 57788999999999999999999999999999999999999999999999999999998765
No 33
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=98.09 E-value=8e-05 Score=64.25 Aligned_cols=153 Identities=15% Similarity=0.158 Sum_probs=92.5
Q ss_pred eeEEEEEEcCCCCCCCCCCcc---ccCCCCCchhHHHHHHHHHHHH---Hhc----CCCccchHHHHHHHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSI---SKNRKHYLVGDLFALLSAMTYG---LFT----GRRKLDMQKLVGCIGLFTLVALWW 71 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~---~~~~~~~~lGd~LaLlsA~~yA---lY~----~~~~~~~~~~~g~vgl~~~l~l~p 71 (206)
.|++++..++...+|.++++. +....++..|.+++++++++-| +|. ++++.+....-...++++.++..+
T Consensus 82 ~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~ 161 (244)
T PF04142_consen 82 AGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL 161 (244)
T ss_pred HHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence 577777777654422221111 1234567899999998877655 566 333344322222334444444433
Q ss_pred HHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHH
Q 039155 72 LVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIY 151 (206)
Q Consensus 72 ~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~ 151 (206)
....-+.....+ ..+- +.|-.....-++.+.++..+....+|+.+...=+....+++.++++..+++++.+++...
T Consensus 162 ~~~~~~~~~~~~-~g~f---~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f 237 (244)
T PF04142_consen 162 ALLLSDGSAISE-SGFF---HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSF 237 (244)
T ss_pred HHhccccccccc-CCch---hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHH
Confidence 333222211111 1111 112222222333456677777889999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 039155 152 IIGSVQN 158 (206)
Q Consensus 152 iiG~~LI 158 (206)
++|+.+|
T Consensus 238 ~lg~~~V 244 (244)
T PF04142_consen 238 LLGAALV 244 (244)
T ss_pred hhheecC
Confidence 9998764
No 34
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.03 E-value=0.00039 Score=58.66 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHH-HHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155 96 IIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDM-FIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT 172 (206)
Q Consensus 96 ~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~-i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~ 172 (206)
..+..+.++....++++..+++++++..+++...+.|.++.+.++ ++++|+++...+.|..+.+.|+.++..+....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~ 148 (292)
T COG0697 71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG 148 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence 345555666788999999999999999999999999999999997 77799999999999999999999999776643
No 35
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.00 E-value=0.00018 Score=64.80 Aligned_cols=76 Identities=4% Similarity=-0.012 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
+.|..++..|++ ++..+...+.++++++++++++.-.++|+++++.++++++|+++...++|.+++++|+.++...
T Consensus 112 ~~~~~llp~gl~-~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~ 187 (350)
T PTZ00343 112 LFLKNFLPQGLC-HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVK 187 (350)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecc
Confidence 467778888886 5666777889999999999999999999999999999999999999999999999999998754
No 36
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=97.99 E-value=0.00043 Score=60.41 Aligned_cols=123 Identities=9% Similarity=-0.011 Sum_probs=88.2
Q ss_pred HHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 039155 37 LLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYF 111 (206)
Q Consensus 37 LlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l 111 (206)
++-++.|+..- + .+..+...+..+=.+++.++++|.... + ....+ +.+.|......|++.....+.+
T Consensus 14 ~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~------~-~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 85 (292)
T PRK11272 14 FALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLL------R-GHPLP-TLRQWLNAALIGLLLLAVGNGM 85 (292)
T ss_pred HHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH------h-CCCCC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666543 1 224554455555566666666655432 2 12222 2356776777887766677888
Q ss_pred HHHHh-hhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 112 WALGV-VRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 112 ~~~al-~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
..++. +.+++..+++...++|+++++.+++ ++|+++..+++|.++.++|++++..+
T Consensus 86 ~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~ 142 (292)
T PRK11272 86 VTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG 142 (292)
T ss_pred HHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC
Confidence 88998 9999999999999999999999986 59999999999999999999988643
No 37
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.80 E-value=0.00078 Score=58.98 Aligned_cols=72 Identities=10% Similarity=-0.000 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-hchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 97 IIANGFVGNFVSDYFWALGVVR-TSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 97 ll~lgl~~svl~~~l~~~al~~-tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
++..|++.....+.++..++++ .++..+++...+.|+++.+.++++++|+++..+++|.++.++|+.++..+
T Consensus 61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~ 133 (299)
T PRK11453 61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED 133 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc
Confidence 3444543333344455678887 46789999999999999999999999999999999999999999988754
No 38
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.78 E-value=0.00085 Score=58.69 Aligned_cols=126 Identities=15% Similarity=0.121 Sum_probs=79.8
Q ss_pred hhHHHHHHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHH
Q 039155 31 VGDLFALLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGN 105 (206)
Q Consensus 31 lGd~LaLlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~s 105 (206)
.+++++++++++|+..- + -+.++...+..+-..++.++++|.. ... ..+. +.|..++. +.+.-
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~------~~~---~~~~--~~~~~~~~-~~l~~ 71 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV------GFP---RLRQ--FPKRYLLA-GGLLF 71 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc------ccc---cccc--ccHHHHHH-HhHHH
Confidence 46778899999999765 1 1224322333333344444444321 111 1111 11222222 22223
Q ss_pred HHHHHHHHHHhh----hhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 106 FVSDYFWALGVV----RTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 106 vl~~~l~~~al~----~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
...+.+...+++ .+++..+++..++.|+++.++++++++|+++..+++|.++-++|+.++..+
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 344444555554 467788899999999999999999999999999999999999999988754
No 39
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=97.68 E-value=0.00056 Score=57.30 Aligned_cols=60 Identities=13% Similarity=0.086 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155 105 NFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW 164 (206)
Q Consensus 105 svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l 164 (206)
+.++..+..+.+++.+++..++...+++.++.+.+++++||+++..+++|+.+++.|.++
T Consensus 162 ~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 162 NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344556678999999999999999999999999999999999999999999999998754
No 40
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.64 E-value=0.0012 Score=59.71 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 94 AEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 94 w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
|.--+.+|++ =+.++++.+.|.++|+-+.+.+.-...+|++++..++++++++++.+++|.++.++|+.++...+.
T Consensus 79 ~w~y~lla~~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 79 WWKYFLLALL-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 3334445775 589999999999999999999999999999999999999999999999999999999998876543
No 41
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.59 E-value=0.00078 Score=51.54 Aligned_cols=67 Identities=18% Similarity=0.060 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 103 VGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 103 ~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
++-.++++++..+++..+-..+ ++---+....+++.++++++|++++.+++|..+|++|+..++..+
T Consensus 38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3447788999999988774443 333446778889999999999999999999999999999998654
No 42
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.55 E-value=0.00076 Score=52.43 Aligned_cols=69 Identities=20% Similarity=0.113 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 102 FVGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 102 l~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
+.+-.++++++.++++..+-..+ ++--.+....+.+.++++++|++++.+++|..+|++|+..++..+.
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~ 106 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR 106 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence 33447789999999998775444 2323467788899999999999999999999999999999986554
No 43
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.45 E-value=0.0035 Score=55.46 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHhc-CCCccchHHHHHHHHHHHHHHHHHHHHH-hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 039155 35 FALLSAMTYGLFT-GRRKLDMQKLVGCIGLFTLVALWWLVWP-LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFW 112 (206)
Q Consensus 35 LaLlsA~~yAlY~-~~~~~~~~~~~g~vgl~~~l~l~p~~~i-l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~ 112 (206)
.++.=|+.|+.|- -++++.+.-..|+ ..=++.+.|+.++ +-+.+-++.+..-.+...|..++..|++ |.+.-.++
T Consensus 152 val~la~sf~~Ygl~RK~~~v~a~~g~--~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~v-TavpL~lf 228 (293)
T COG2962 152 VALALALSFGLYGLLRKKLKVDALTGL--TLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLV-TAVPLLLF 228 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcCCchHHhH--HHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHH-HHHHHHHH
Confidence 4555678888888 2323322222221 1223333444332 2223333111111223578888999998 88999999
Q ss_pred HHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 113 ~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
..|-++++=...++.-+.+|-+-.+.+++++||+++..+.+..++|-.|..+...+..
T Consensus 229 ~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l 286 (293)
T COG2962 229 AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL 286 (293)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998876544
No 44
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.44 E-value=0.00044 Score=61.99 Aligned_cols=153 Identities=17% Similarity=0.133 Sum_probs=107.9
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc---------CCCccchHHHHHHHHHHHHHHHH-H
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---------GRRKLDMQKLVGCIGLFTLVALW-W 71 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~---------~~~~~~~~~~~g~vgl~~~l~l~-p 71 (206)
.||.+.+.+|.. -...|.+.+.+|-+..+... ++++++-...+.+.+-+++..+. |
T Consensus 148 ~GV~ias~~e~~--------------fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P 213 (316)
T KOG1441|consen 148 FGVAIASVTELS--------------FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIP 213 (316)
T ss_pred eeEEEeeecccc--------------ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcc
Confidence 477777775532 23799999999999999877 13445544455566666777776 5
Q ss_pred HHHHhhhcCC---CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCcc
Q 039155 72 LVWPLTAMGI---EPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYS 148 (206)
Q Consensus 72 ~~~il~~~g~---e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls 148 (206)
......-... + .. |.... ....+++. +|.+.-|....+.+.+|||+.-+++..+==.+..+..|++++++.+
T Consensus 214 ~~~~~~~~~~~~~~-~~--~~~~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt 288 (316)
T KOG1441|consen 214 FLDYVEGNKFVGFL-TA--PWFVT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVT 288 (316)
T ss_pred hHhhhcccceeeee-cc--ccchh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCc
Confidence 5443111111 2 11 22222 33345555 5677777777889999999999999988888888999999999999
Q ss_pred HHHHHHHHHHHHHhhheeccccchh
Q 039155 149 PIYIIGSVQNSSQNRWIDIAEFKTI 173 (206)
Q Consensus 149 ~~~iiG~~LIl~G~~l~~~~~~~~~ 173 (206)
+.+..|.++-++|+.+=++.+.++.
T Consensus 289 ~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 289 FLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999876655443
No 45
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.36 E-value=0.0028 Score=48.13 Aligned_cols=65 Identities=11% Similarity=-0.004 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhhhchHH-HHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 104 GNFVSDYFWALGVVRTSPLV-AALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 104 ~svl~~~l~~~al~~tsp~~-~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
+-.+++++...+++..+-.. =++---+....+.++++++++|++++.+++|..+|+.|+..++..
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 34778899999999887443 355556777889999999999999999999999999999998754
No 46
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.31 E-value=0.0032 Score=48.17 Aligned_cols=62 Identities=18% Similarity=0.006 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 105 NFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 105 svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
-.+++++...+++..+-..+ ++--.+....+.++++++++|++++.+++|..+|+.|+..++
T Consensus 45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 36788999999988774433 455557778889999999999999999999999999999875
No 47
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.29 E-value=0.013 Score=51.43 Aligned_cols=129 Identities=11% Similarity=0.001 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHhc---CC-CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHH
Q 039155 32 GDLFALLSAMTYGLFT---GR-RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFV 107 (206)
Q Consensus 32 Gd~LaLlsA~~yAlY~---~~-~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl 107 (206)
|.+++++++++|+..- +. ...+.+...+ ..++.+++...... .. ++..+. .+.|..-+..|++ =.+
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~g~~~~~~~~--~~~g~l~~~~~~~~---~~-~~~~~~---~~~~~~g~l~G~~-w~i 71 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIGGGPYSQTLG--TTFGALILSIAIAI---FV-LPEFWA---LSIFLVGLLSGAF-WAL 71 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccCCCHHHHHHH--HHHHHHHHHHHHHH---Hh-CCcccc---cHHHHHHHHHHHH-HHh
Confidence 6789999999999644 21 1233333332 12222222111111 11 211111 2344433344443 357
Q ss_pred HHHHHHHHhhhhchHHHHHHHH-hHHHHHHHHHHHHcCcCccHHH----HHHHHHHHHHhhheecccc
Q 039155 108 SDYFWALGVVRTSPLVAALGVS-LTIPLAMLEDMFIHHQHYSPIY----IIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 108 ~~~l~~~al~~tsp~~~sv~l~-L~ppla~i~d~i~~ge~ls~~~----iiG~~LIl~G~~l~~~~~~ 170 (206)
++.++..++++++-..+-.... +++.++.+.+.++++|+.+..+ ++|.+++++|..++...+.
T Consensus 72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~ 139 (290)
T TIGR00776 72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKD 139 (290)
T ss_pred hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccc
Confidence 8899999999999887755555 8888999999999999999999 9999999999999876543
No 48
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.26 E-value=0.0032 Score=47.96 Aligned_cols=65 Identities=15% Similarity=0.080 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHhhhhchHH-HHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 105 NFVSDYFWALGVVRTSPLV-AALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 105 svl~~~l~~~al~~tsp~~-~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
-.+++++...|+|..+-.. =++---..+..++++++++++|++++..++|-.++++|+..++..+
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 3678889999999877333 3555566778899999999999999999999999999999987653
No 49
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=97.22 E-value=0.0084 Score=54.29 Aligned_cols=135 Identities=13% Similarity=0.198 Sum_probs=90.8
Q ss_pred CCCCchhHHHHHHHHHH---HHHhc----CCCccc---hHHHHHHHH-HHHHHHHHHHHHHhhhcCCCC----cccCCCC
Q 039155 26 RKHYLVGDLFALLSAMT---YGLFT----GRRKLD---MQKLVGCIG-LFTLVALWWLVWPLTAMGIEP----KFAFPHS 90 (206)
Q Consensus 26 ~~~~~lGd~LaLlsA~~---yAlY~----~~~~~~---~~~~~g~vg-l~~~l~l~p~~~il~~~g~e~----~~~~P~~ 90 (206)
..++.+|-...+.+.+. -++|. .+++.+ .+.++.+.| +++++..+ . .+.|. .+..-.+
T Consensus 178 ~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~----~---~d~~~i~~~gff~G~s 250 (345)
T KOG2234|consen 178 AQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL----L---QDGEAINEYGFFYGYS 250 (345)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh----h---ccccccccCCcccccc
Confidence 45677887766655443 34566 345555 245555555 33333321 1 23332 1222344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 91 AKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 91 ~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
+.+|..++.+|+.+ .+..+-+|+.+-..=+-.-.+.+.++.++.+.+++-.+|....+|..+|+.++.+=...++
T Consensus 251 ~~vw~vVl~~a~gG-----Llvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 251 SIVWLVVLLNAVGG-----LLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred HHHHHHHHHHhccc-----hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 56787777776643 3444666888888888888899999999999999999999999999999999999886666
Q ss_pred ch
Q 039155 171 KT 172 (206)
Q Consensus 171 ~~ 172 (206)
++
T Consensus 326 ~~ 327 (345)
T KOG2234|consen 326 RD 327 (345)
T ss_pred cc
Confidence 54
No 50
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.21 E-value=0.0049 Score=54.55 Aligned_cols=135 Identities=15% Similarity=0.128 Sum_probs=92.4
Q ss_pred CchhHHHHHHHHHHHHHhc---C-CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---G-RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVG 104 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~-~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~ 104 (206)
.-.|.++++.+-+.|+.-- . -++++....++.--+.++.++..++... -++....+.-...+.+..+...++.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRviwS~~~~l~ll~~~--r~~~~~~~~~~~p~~~~~~~l~a~l- 81 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRVIWSFPFMLALLFLL--RQWRELKQLLKQPKTLLMLALTALL- 81 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHhCcHHHHHHHHHHHH-
Confidence 4579999999999999633 1 1233333344444444444443222221 1111111111112456666666665
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 105 NFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 105 svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
-...+.++.||+..=....+|+|-++.|.++.+.+.++++|+++..+++..++-.+|+..-.
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~ 143 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT 143 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 35688899999999999999999999999999999999999999999999999999997654
No 51
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=97.08 E-value=0.0089 Score=53.12 Aligned_cols=161 Identities=17% Similarity=0.196 Sum_probs=103.3
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc--CC-----CccchHHHHHHHHHHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT--GR-----RKLDMQKLVGCIGLFTLVALWWLVW 74 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~--~~-----~~~~~~~~~g~vgl~~~l~l~p~~~ 74 (206)
.|++.+-+.|--.++++..| .++...||++.+++-+.-|... +| .+++.....|+=|+++++++-.+.+
T Consensus 151 lGlviVg~~d~~~~~~p~~d----~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i 226 (372)
T KOG3912|consen 151 LGLVIVGSLDVHLVTDPYTD----YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAI 226 (372)
T ss_pred hhhheeeeeecccccCCccc----cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHH
Confidence 46666666654333333222 4678999999999999999766 32 2233345678888999888766666
Q ss_pred HhhhcCCCCccc-CCCC-HHHHHHH---------HHHHHHHHHHHHHHHHHH----hhhhchHHHHHHHHhHHHHHHHHH
Q 039155 75 PLTAMGIEPKFA-FPHS-AKTAEII---------IANGFVGNFVSDYFWALG----VVRTSPLVAALGVSLTIPLAMLED 139 (206)
Q Consensus 75 il~~~g~e~~~~-~P~~-~~~w~~l---------l~lgl~~svl~~~l~~~a----l~~tsp~~~sv~l~L~ppla~i~d 139 (206)
..++......|. -|.. +.-|... ++.++....++-.++|++ -|..|++.-.+.=.+--.+--++.
T Consensus 227 ~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~s 306 (372)
T KOG3912|consen 227 PMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFS 306 (372)
T ss_pred HHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhH
Confidence 555544331122 1221 1222221 445555566666666643 455566666666666666667777
Q ss_pred HHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 140 MFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 140 ~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
.....|++...++.|.++.+.|..+-+
T Consensus 307 i~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 307 IAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777889999999999999999998866
No 52
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.94 E-value=0.048 Score=47.88 Aligned_cols=76 Identities=11% Similarity=-0.022 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 94 AEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 94 w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
+...+..++ +..++..+-|.|+++.+...-.+.=...|+.+++++.++++++.+..++++.+++.+|+.+....+.
T Consensus 64 ~~~~~~~~~-~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~ 139 (303)
T PF08449_consen 64 LKKYAILSF-LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS 139 (303)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence 333445555 3788889999999999988888888899999999999999999999999999999999999886644
No 53
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.67 E-value=0.015 Score=51.14 Aligned_cols=143 Identities=16% Similarity=0.195 Sum_probs=89.3
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc---CC---CccchHHHHHHHH-HHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---GR---RKLDMQKLVGCIG-LFTLVALWWLVW 74 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~---~~---~~~~~~~~~g~vg-l~~~l~l~p~~~ 74 (206)
+|+++.++.|+..+++ ..+++..-|....++|.+.|..|. +. +..+.-+.. .+| +.+.++.
T Consensus 115 iGv~lts~~~~~~~~~------~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~~~~~~~lPq-aiGm~i~a~i~----- 182 (269)
T PF06800_consen 115 IGVILTSYQDKKSDKS------SSKSNMKKGILALLISTIGYWIYSVIPKAFHVSGWSAFLPQ-AIGMLIGAFIF----- 182 (269)
T ss_pred HHHHHhcccccccccc------ccccchhhHHHHHHHHHHHHHHHHHHHHhcCCChhHhHHHH-HHHHHHHHHHH-----
Confidence 4666777776542111 113445679999999999999999 22 223322222 222 1111111
Q ss_pred HhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHH----
Q 039155 75 PLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPI---- 150 (206)
Q Consensus 75 il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~---- 150 (206)
.....++ +.. .+.|..++.-.+. .+++.++..+.+..+...+=..--+.++++.+.+.++++|+=+..
T Consensus 183 --~~~~~~~-~~~---k~~~~nil~G~~w--~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~ 254 (269)
T PF06800_consen 183 --NLFSKKP-FFE---KKSWKNILTGLIW--GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIY 254 (269)
T ss_pred --hhccccc-ccc---cchHHhhHHHHHH--HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHH
Confidence 1111111 111 2355544443333 568888889999999888888888999999999999999987764
Q ss_pred HHHHHHHHHHHhhh
Q 039155 151 YIIGSVQNSSQNRW 164 (206)
Q Consensus 151 ~iiG~~LIl~G~~l 164 (206)
.++|.+||++|-.+
T Consensus 255 ~~~G~~Liv~G~il 268 (269)
T PF06800_consen 255 TLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHHHhhhc
Confidence 66788889888654
No 54
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.65 E-value=0.0093 Score=43.92 Aligned_cols=55 Identities=25% Similarity=0.179 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHH
Q 039155 104 GNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQN 158 (206)
Q Consensus 104 ~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LI 158 (206)
+-.++.+++.+|+++.+...+ ++.--+......+++++++||++++.+++|..+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 457788999999999887666 5555688899999999999999999999999886
No 55
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.36 E-value=0.033 Score=48.03 Aligned_cols=77 Identities=5% Similarity=0.012 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155 95 EIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT 172 (206)
Q Consensus 95 ~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~ 172 (206)
.....=|++ -.+.+.+...++++++|..--+...+.+++++++.+++++++++..+|++-.++++|+.+...+....
T Consensus 18 ~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 18 LKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 334444554 56788899999999999999999999999999999999999999999999999999999998665543
No 56
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.10 E-value=0.011 Score=51.46 Aligned_cols=133 Identities=16% Similarity=0.111 Sum_probs=90.1
Q ss_pred CchhHHHHHHHHHHHHHhc-CC-------CccchHHHHHHHHHHHHHHHHHHHHHhhhcC--CCC-cccCCCCHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT-GR-------RKLDMQKLVGCIGLFTLVALWWLVWPLTAMG--IEP-KFAFPHSAKTAEII 97 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~-~~-------~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g--~e~-~~~~P~~~~~w~~l 97 (206)
..+|.+|.++|-.+=++-- .+ ++-.. .++..+-+.+.+.+--.++ ++| +|- .|..-++ ..|.-+
T Consensus 170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~-~MM~~~NlwStL~Lg~g~l---fTGElweF~yF~~RhP-~~~~~l 244 (337)
T KOG1580|consen 170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGT-SMMFYTNLWSTLYLGAGLL---FTGELWEFFYFVQRHP-YVFWDL 244 (337)
T ss_pred cchHHHHHHHHHHhcccchhHHHHHHHhhccCch-hhHHHHHHHHHHHhhhhhe---ehhhHHHHHHHHHhcc-HHHHHH
Confidence 4578888888755544433 11 11222 2333444555554432222 222 220 0111122 356678
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
..+|+ |+++++++...-+...+|..-|+.-..--.++.++.+++++.++++++|+|.++++.+...-..
T Consensus 245 ~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 245 TLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 88888 6899999999999999999999988888889999999999999999999999999999877553
No 57
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=95.97 E-value=0.27 Score=42.87 Aligned_cols=123 Identities=9% Similarity=-0.065 Sum_probs=81.4
Q ss_pred CCchhHHHHHHHHHHHHHhc---C--CCccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155 28 HYLVGDLFALLSAMTYGLFT---G--RRKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF 102 (206)
Q Consensus 28 ~~~lGd~LaLlsA~~yAlY~---~--~~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl 102 (206)
++..|..+++++.++++.-- + -+.++...+..+=.+++.+++++.... . ...++ .+.|...+..|+
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~~~~~~~~~~R~~~a~l~l~~~~~~------~-~~~~~--~~~~~~~~~~g~ 79 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPLVGAPGVTALRLALGTLILIAIFKP------W-RLRFA--KEQRLPLLFYGV 79 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhH------H-hccCC--HHHHHHHHHHHH
Confidence 45789999999999998544 1 122444444444455665555543211 1 01122 245555666666
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 103 VGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 103 ~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
+ ....+.++.++++++++..+++.....|.++++.+ +|++. ...+..+.++|++++.
T Consensus 80 ~-~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~ 136 (293)
T PRK10532 80 S-LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLL 136 (293)
T ss_pred H-HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheee
Confidence 4 57778889999999999999999999999988766 35544 3556677889988865
No 58
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.74 E-value=0.049 Score=48.34 Aligned_cols=85 Identities=11% Similarity=0.084 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecc
Q 039155 89 HSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 89 ~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
++++++++.+..++- +.++...-.--++..++..++..-..---++.+..++++.++++.++.-|+.+|..|+++=..+
T Consensus 255 hp~~tyGy~~~~s~~-gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ys 333 (367)
T KOG1582|consen 255 HPVRTYGYAFLFSLA-GYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYS 333 (367)
T ss_pred CcHhHHHHHHHHHHH-hHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhccc
Confidence 445677777777663 6677776667778888888877777777888899999999999999999999999999997777
Q ss_pred ccchhh
Q 039155 169 EFKTII 174 (206)
Q Consensus 169 ~~~~~~ 174 (206)
+.++..
T Consensus 334 k~nk~~ 339 (367)
T KOG1582|consen 334 KRNKIP 339 (367)
T ss_pred CCCCCc
Confidence 644443
No 59
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.55 E-value=0.0074 Score=53.31 Aligned_cols=80 Identities=13% Similarity=0.034 Sum_probs=64.5
Q ss_pred CCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhe
Q 039155 87 FPHSAKTAEII-IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWI 165 (206)
Q Consensus 87 ~P~~~~~w~~l-l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~ 165 (206)
.|.....|+.+ ...|.. +-.+..||.++++-.-+++...++|.++.+++|++++|++|....+|..+-+.|+.++
T Consensus 92 gp~g~R~~LiLRg~mG~t----gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLI 167 (346)
T KOG4510|consen 92 GPEGKRKWLILRGFMGFT----GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLI 167 (346)
T ss_pred cCCCcEEEEEeehhhhhh----HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEE
Confidence 34443455433 233433 4456678999999999999999999999999999999999999999999999999999
Q ss_pred ecccc
Q 039155 166 DIAEF 170 (206)
Q Consensus 166 ~~~~~ 170 (206)
.+++-
T Consensus 168 vRPpF 172 (346)
T KOG4510|consen 168 VRPPF 172 (346)
T ss_pred ecCCc
Confidence 97743
No 60
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.31 E-value=0.0092 Score=52.83 Aligned_cols=145 Identities=14% Similarity=0.153 Sum_probs=99.1
Q ss_pred CchhHHHHHHHHHHHHHhc---C--CCcc-chH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCcc-cCCCCHHHHHHHHHH
Q 039155 29 YLVGDLFALLSAMTYGLFT---G--RRKL-DMQ-KLVGCIGLFTLVALWWLVWPLTAMGIEPKF-AFPHSAKTAEIIIAN 100 (206)
Q Consensus 29 ~~lGd~LaLlsA~~yAlY~---~--~~~~-~~~-~~~g~vgl~~~l~l~p~~~il~~~g~e~~~-~~P~~~~~w~~ll~l 100 (206)
+..|.++..+|+++-|+.. . +.++ +-. .+..+.-+.+++...|.+++.+-.+--..| .+| +++.|..+...
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~-a~~Fw~~mtLs 261 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLP-AIKFWILMTLS 261 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccch-HHHHHHHHHHH
Confidence 4689999888888877655 2 2222 222 334456688888888988886654421112 233 34678877777
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhhh
Q 039155 101 GFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIIT 175 (206)
Q Consensus 101 gl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~~ 175 (206)
|+++ +.-++.--+-+|-|||..-.+...----.-.+.|..+.+|..+..-|-|-++|++|=..-.+-++.++++
T Consensus 262 glfg-F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~ 335 (347)
T KOG1442|consen 262 GLFG-FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK 335 (347)
T ss_pred HHHH-HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence 7763 3333334567889999887777766666677888899999999999999999999987766655544443
No 61
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.23 E-value=0.25 Score=44.24 Aligned_cols=79 Identities=11% Similarity=-0.020 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccc
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFK 171 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~ 171 (206)
+.|.-++...+ |..+++.+..+-++..+|..-+..+..-=.++++...+.+|.+++..+++|..+|+.|+++=..-+.|
T Consensus 239 ~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 239 DVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 35556677766 47889999999999999999999998999999999999999999999999999999999886655444
No 62
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.21 E-value=0.083 Score=40.69 Aligned_cols=60 Identities=13% Similarity=0.060 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhhhhchHHHH-HHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155 105 NFVSDYFWALGVVRTSPLVAA-LGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW 164 (206)
Q Consensus 105 svl~~~l~~~al~~tsp~~~s-v~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l 164 (206)
+..+..++.+.+...+=+.+. +..+++-.++++.++++.+|..+...++|.+||+.|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 444556666666666633333 334677789999999998888899999999999999875
No 63
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.00 E-value=0.67 Score=42.23 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=71.0
Q ss_pred CCchhHHHHHHHHHHHHHhc-CCCc---cchHHHHHHHHHHHHHHHHHHHHH-hhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155 28 HYLVGDLFALLSAMTYGLFT-GRRK---LDMQKLVGCIGLFTLVALWWLVWP-LTAMGIEPKFAFPHSAKTAEIIIANGF 102 (206)
Q Consensus 28 ~~~lGd~LaLlsA~~yAlY~-~~~~---~~~~~~~g~vgl~~~l~l~p~~~i-l~~~g~e~~~~~P~~~~~w~~ll~lgl 102 (206)
+..+|.+.++++++|++-+- ..+| -+--.+--..|++.-++ .|...- +-...+...+...+ ...+..-+.-|+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~v~gi~~wl~-~~~~~g~~~~~~f~~~~~~~~-~~~~~~~~l~G~ 81 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKKVKKWSWETMWSVGGIFSWLI-LPWLIAALLLPDFWAYYSSFS-GSTLLPVFLFGA 81 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccccCCCchhHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHhcC-HHHHHHHHHHHH
Confidence 46789999999999999876 2222 22112211222322222 221111 10111111122111 234443333444
Q ss_pred HHHHHHHHHHHHHhhhhc-hHHHHHHHHhHHHHHHHHHHHHcCcCc---c----HHHHHHHHHHHHHhhheec
Q 039155 103 VGNFVSDYFWALGVVRTS-PLVAALGVSLTIPLAMLEDMFIHHQHY---S----PIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 103 ~~svl~~~l~~~al~~ts-p~~~sv~l~L~ppla~i~d~i~~ge~l---s----~~~iiG~~LIl~G~~l~~~ 167 (206)
+ =.+++..+..++++.+ +.-..++.-++-+++.++..+++||-. + ..-++|.+++++|+.+..+
T Consensus 82 ~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 82 L-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred H-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3 2345555555555554 223344444455556677888888643 2 3578899999999999886
No 64
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.75 E-value=0.073 Score=47.33 Aligned_cols=60 Identities=10% Similarity=0.021 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
++..+-..|....+.+.++-...++.+++++++..+++|+++...++|.+++++|..++.
T Consensus 62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 344445567778888888877789999999999999999999999999999999998766
No 65
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=94.57 E-value=0.93 Score=40.86 Aligned_cols=144 Identities=19% Similarity=0.173 Sum_probs=88.6
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHH---hc----CC------CccchHHHHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGL---FT----GR------RKLDMQKLVGCIGLFTLVA 68 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAl---Y~----~~------~~~~~~~~~g~vgl~~~l~ 68 (206)
+|++|.++-.++- .+.|-.+.+.++++-|+ |. ++ ..+++...+ .-.-.+.
T Consensus 149 ~Glflft~KsTqf--------------~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l---~p~M~~~ 211 (349)
T KOG1443|consen 149 VGLFLFTYKSTQF--------------NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHL---QPWMSIG 211 (349)
T ss_pred hheeEEEecccce--------------eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHh---hhHHHHH
Confidence 6889998876542 37899999999888775 22 11 123321111 1111112
Q ss_pred HHHHHHHhhhcCCCC-----cccCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhchHHHHHHHHhHHHHHHHHHH
Q 039155 69 LWWLVWPLTAMGIEP-----KFAFPHSAKTAEIIIANGFVGNFVSDYFW---ALGVVRTSPLVAALGVSLTIPLAMLEDM 140 (206)
Q Consensus 69 l~p~~~il~~~g~e~-----~~~~P~~~~~w~~ll~lgl~~svl~~~l~---~~al~~tsp~~~sv~l~L~ppla~i~d~ 140 (206)
+.|. .+++.|.+. .+..-++...|..+-..++ |+.+++.+- -.-+..|+....|+.--.-.+.+.+.+.
T Consensus 212 Ll~~--~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ 288 (349)
T KOG1443|consen 212 LLPL--SLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAI 288 (349)
T ss_pred HHHH--HHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHH
Confidence 2222 233444331 1222232234444433333 244444333 2456788988889888888888999999
Q ss_pred HHcCcCccHHHHHHHHHHHHHhhhe
Q 039155 141 FIHHQHYSPIYIIGSVQNSSQNRWI 165 (206)
Q Consensus 141 i~~ge~ls~~~iiG~~LIl~G~~l~ 165 (206)
++.++.+|..+++|..+.+.|+..=
T Consensus 289 ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 289 IILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHhhcchhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999876
No 66
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=93.57 E-value=0.19 Score=45.24 Aligned_cols=91 Identities=12% Similarity=0.114 Sum_probs=71.4
Q ss_pred hcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHH
Q 039155 78 AMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQ 157 (206)
Q Consensus 78 ~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~L 157 (206)
.++..+ ..-+++...|.-++-+|++ ..+++++-|.++++.+-.++=..=.++||++.++.+++.+|+.+...+.--+.
T Consensus 68 ~l~~~~-~~~~~~~~~~~~llpl~~~-~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~p 145 (316)
T KOG1441|consen 68 VLKLVP-PSKISSKLPLRTLLPLGLV-FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLP 145 (316)
T ss_pred HhcCCC-CCccccccchHHHHHHHHH-HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEE
Confidence 455553 3222233567778888886 78999999999999999999999999999999999999999998877766666
Q ss_pred HHHHhhheecccc
Q 039155 158 NSSQNRWIDIAEF 170 (206)
Q Consensus 158 Il~G~~l~~~~~~ 170 (206)
|..|+.++..++.
T Consensus 146 iv~GV~ias~~e~ 158 (316)
T KOG1441|consen 146 IVFGVAIASVTEL 158 (316)
T ss_pred eeeeEEEeeeccc
Confidence 7777766665433
No 67
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=93.55 E-value=0.26 Score=45.34 Aligned_cols=74 Identities=7% Similarity=0.007 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccch
Q 039155 98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKT 172 (206)
Q Consensus 98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~ 172 (206)
++.+.+ =+++++..|.|+++|+....++.-+..-.|+.+++.++.+|++|....++..+=++|++++...+.+.
T Consensus 163 l~fc~l-WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 163 LFFCPL-WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 334443 46899999999999999999999999999999999999999999999999999999999999775544
No 68
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.01 E-value=0.17 Score=43.22 Aligned_cols=64 Identities=11% Similarity=0.158 Sum_probs=59.0
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
.++|++..|+++.+|+.+|-...-.--+..+.+|+.+++++....++.+++-+.|+.+..+.++
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 4688999999999999999999999999999999999999999999999999999999885544
No 69
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=92.29 E-value=0.92 Score=39.97 Aligned_cols=82 Identities=6% Similarity=-0.075 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcCccHHH----HHHHHHHHHHhhhee
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQHYSPIY----IIGSVQNSSQNRWID 166 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~ls~~~----iiG~~LIl~G~~l~~ 166 (206)
..|..-+..|++ =.+++..+..+.++.+-+.+ =++--+|.+.+.+++.+++||--+..+ +++.++|++|+++..
T Consensus 43 ~~~~~~~lsG~~-W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 43 TSFIVAFLSGAF-WAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 455555566664 35677777777776663322 233446778899999999999776543 447789999999999
Q ss_pred ccccchhh
Q 039155 167 IAEFKTII 174 (206)
Q Consensus 167 ~~~~~~~~ 174 (206)
+.++++-+
T Consensus 122 ~~~~~~~~ 129 (269)
T PF06800_consen 122 YQDKKSDK 129 (269)
T ss_pred cccccccc
Confidence 77765554
No 70
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=91.55 E-value=1.2 Score=39.65 Aligned_cols=70 Identities=19% Similarity=0.236 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh----hhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVV----RTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~----~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
..|.+++.+-+ .++.=..++- .+++..+++.+.+-=.++.++..+.+..++++..++|+.+|++|-.+-.
T Consensus 240 ~~~~yLl~n~L-----~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 240 SMWVYLLFNVL-----TQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHHHHH-----HHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 35666666544 4444444443 5566777788888888999999999999999999999999999987644
No 71
>PRK13499 rhamnose-proton symporter; Provisional
Probab=91.25 E-value=9.8 Score=34.72 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=42.0
Q ss_pred HHHHHHHHHhhhhchH-HHH---HHHHhHHHHHHHHHHHHcCcCcc------HHHHHHHHHHHHHhhheecc
Q 039155 107 VSDYFWALGVVRTSPL-VAA---LGVSLTIPLAMLEDMFIHHQHYS------PIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 107 l~~~l~~~al~~tsp~-~~s---v~l~L~ppla~i~d~i~~ge~ls------~~~iiG~~LIl~G~~l~~~~ 168 (206)
++++++.++-.+.+.. -.+ +.+.+.+.++.+-..+ ++|.=+ ..-++|.+++++|..++...
T Consensus 272 ~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 272 LQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 4455555555555322 222 5557788899999985 688766 56789999999999887654
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=90.80 E-value=6.8 Score=30.82 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHH-hHHHHHHHHHHH----HcCcCccHHHHHHHHHHHHHhhh
Q 039155 100 NGFVGNFVSDYFWALGVVRTSPLVAALGVS-LTIPLAMLEDMF----IHHQHYSPIYIIGSVQNSSQNRW 164 (206)
Q Consensus 100 lgl~~svl~~~l~~~al~~tsp~~~sv~l~-L~ppla~i~d~i----~~ge~ls~~~iiG~~LIl~G~~l 164 (206)
-|++ .++.-++.++.+.+.++..+.+... =|...+.+.|.. ...+++++..++|.+++++|+.+
T Consensus 70 GG~l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 70 GGLL-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred cHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4444 3445556678889999777665554 456668899985 34578999999999999999864
No 73
>PF11742 DUF3302: Protein of unknown function (DUF3302); InterPro: IPR011223 This is a family of uncharacterised bacterial proteins, restricted to the Gammaproteobacteria.
Probab=90.66 E-value=1.4 Score=31.71 Aligned_cols=57 Identities=23% Similarity=0.468 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHHhc----------CC--CccchHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC
Q 039155 31 VGDLFALLSAMTYGLFT----------GR--RKLDMQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFP 88 (206)
Q Consensus 31 lGd~LaLlsA~~yAlY~----------~~--~~~~~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P 88 (206)
++.++.+..++.|+... ++ .+.+.....|++++++.-.+||+.++.-+...| ++.++
T Consensus 6 ~~vli~~~~~~~~~~~~lh~lP~~iA~kr~Hpq~eaI~v~gwisLft~~~lWp~a~IwA~~d~~-~~g~~ 74 (78)
T PF11742_consen 6 LVVLIFVVIVLIYGFWKLHDLPGKIAHKRNHPQAEAIHVLGWISLFTLHVLWPFAWIWAYLDRP-DRGWG 74 (78)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-ccCCC
Confidence 56777788888888765 11 224566899999999998999999998888888 46554
No 74
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.11 E-value=0.19 Score=45.31 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=49.4
Q ss_pred chHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhhhhhhcccccC
Q 039155 120 SPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDC 184 (206)
Q Consensus 120 sp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~~~~~~~~~~~ 184 (206)
+++.++-.-.++.+.+++.+..+++|+++....+|+++.++|=.++..-..++.+.+..+++|+-
T Consensus 89 PasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~ 153 (335)
T KOG2922|consen 89 PASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWEL 153 (335)
T ss_pred hHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHH
Confidence 44555555568899999999999999999999999999999988877554444444455555544
No 75
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=87.85 E-value=1.8 Score=38.48 Aligned_cols=81 Identities=9% Similarity=0.066 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHH-HHHHHhHHHHHHHHHHHHcCcC--ccH----HHHHHHHHHHHHhhh
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVA-ALGVSLTIPLAMLEDMFIHHQH--YSP----IYIIGSVQNSSQNRW 164 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~-sv~l~L~ppla~i~d~i~~ge~--ls~----~~iiG~~LIl~G~~l 164 (206)
.+|..++.. +.|.+.--...|.|+++-+++.+ -+....-...+.+.+.++++|. .++ ....|...++.|+.+
T Consensus 211 ~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~l 289 (300)
T PF05653_consen 211 LTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFL 289 (300)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhe
Confidence 567654444 44567777788999999987654 3444444556777788888864 444 467889999999999
Q ss_pred eeccccchh
Q 039155 165 IDIAEFKTI 173 (206)
Q Consensus 165 ~~~~~~~~~ 173 (206)
+...++++.
T Consensus 290 L~~~~~~~~ 298 (300)
T PF05653_consen 290 LSSSKDKEI 298 (300)
T ss_pred eeccCchhc
Confidence 987665443
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.77 E-value=11 Score=30.42 Aligned_cols=48 Identities=15% Similarity=0.033 Sum_probs=36.2
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHcC----cCccHHHHHHHHHHHHHhhheecc
Q 039155 121 PLVAALGVSLTIPLAMLEDMFIHH----QHYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 121 p~~~sv~l~L~ppla~i~d~i~~g----e~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
.+.+.+...=|...++++|.+=.. .+++...++|.+++++|+++..+.
T Consensus 96 ~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 96 ATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 455566666677778888866443 679999999999999996666544
No 77
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=84.14 E-value=27 Score=31.92 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=78.9
Q ss_pred CCchhHHHHHHHHHHHHHhc-CCCcc---chHHHHHHHHHHHHHHHHHHHHHh-hhcCCCCc-ccCCCCHHHHHHHHHHH
Q 039155 28 HYLVGDLFALLSAMTYGLFT-GRRKL---DMQKLVGCIGLFTLVALWWLVWPL-TAMGIEPK-FAFPHSAKTAEIIIANG 101 (206)
Q Consensus 28 ~~~lGd~LaLlsA~~yAlY~-~~~~~---~~~~~~g~vgl~~~l~l~p~~~il-~~~g~e~~-~~~P~~~~~w~~ll~lg 101 (206)
+.++|.++..+++++-+.|- ..+|+ +--.+=..-|+++.++ .|.+.-. ...++... .+.|. .++......|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~--~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPA--STLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCCh--hHHHHHHHHH
Confidence 45799999999999999766 33333 2111211223444443 3433321 11222211 22343 2333344444
Q ss_pred HHHHHHHHHHHHHHhhhhc-hHHHHHHHHhHHHHHHHHHHHHcCc-------CccHHHHHHHHHHHHHhhheecc
Q 039155 102 FVGNFVSDYFWALGVVRTS-PLVAALGVSLTIPLAMLEDMFIHHQ-------HYSPIYIIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 102 l~~svl~~~l~~~al~~ts-p~~~sv~l~L~ppla~i~d~i~~ge-------~ls~~~iiG~~LIl~G~~l~~~~ 168 (206)
++ =-++...+-.++|+++ +.-.++.+-+...+..++--++.|+ .-....++|.++.++|+.+.-+.
T Consensus 81 ~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 81 VL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 44 3467777788899988 5556666666666666665555443 22346789999999999998744
No 78
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=83.05 E-value=0.38 Score=42.17 Aligned_cols=145 Identities=14% Similarity=0.128 Sum_probs=85.2
Q ss_pred eeEEEEEEcCCCCCCCCCCccccCCCCCchhHHHHHHHHHHHHHhc---CC---CccchHHHHHHHHHHHHHHHHHHHHH
Q 039155 2 AGVAMTTIGKTWTADEPQSSISKNRKHYLVGDLFALLSAMTYGLFT---GR---RKLDMQKLVGCIGLFTLVALWWLVWP 75 (206)
Q Consensus 2 ~Gv~lit~~~~~~~~~~~~~~~~~~~~~~lGd~LaLlsA~~yAlY~---~~---~~~~~~~~~g~vgl~~~l~l~p~~~i 75 (206)
.|+.+.++.|..++++++ ++|--.|....+.|.+.|-+|. +. +-.+..+....=-+++. ++
T Consensus 129 iG~~lTs~~~~~nk~~~~------~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~a-------li 195 (288)
T COG4975 129 IGIYLTSKQDRNNKEEEN------PSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGA-------LI 195 (288)
T ss_pred HhheEeeeeccccccccC------hHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHH-------HH
Confidence 588899898877665542 2344578888899999999999 22 22232222211001111 22
Q ss_pred hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-hHHHHHHHHhHHHHHHHHHHHHcCcCccHH----
Q 039155 76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTS-PLVAALGVSLTIPLAMLEDMFIHHQHYSPI---- 150 (206)
Q Consensus 76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~ts-p~~~sv~l~L~ppla~i~d~i~~ge~ls~~---- 150 (206)
+...+.|. +....+|..++ -|++ =.+++....+|.++.+ ++-=|++- +..+++.+-+.++++|+=|..
T Consensus 196 ~~~~~~~~----~~~K~t~~nii-~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQ-lgViisTiGGIl~L~ekKtkkEm~~ 268 (288)
T COG4975 196 LGFFKMEK----RFNKYTWLNII-PGLI-WAIGNLFMLLAAQKVGVATSFSLSQ-LGVIISTIGGILFLGEKKTKKEMVY 268 (288)
T ss_pred Hhhccccc----chHHHHHHHHh-hHHH-HHhhHHHHHHhhhhhceeeeeeHhh-heeeeeecceEEEEeccCchhhhhh
Confidence 23344452 12335665443 3333 2456666666665444 22222322 566778899999999998875
Q ss_pred HHHHHHHHHHHhhhee
Q 039155 151 YIIGSVQNSSQNRWID 166 (206)
Q Consensus 151 ~iiG~~LIl~G~~l~~ 166 (206)
-++|.+|+++|-.++.
T Consensus 269 v~iGiilivvgai~lg 284 (288)
T COG4975 269 VIIGIILIVVGAILLG 284 (288)
T ss_pred hhhhHHHHHHHhhhhh
Confidence 4678888888876654
No 79
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=81.83 E-value=19 Score=31.52 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=35.9
Q ss_pred HHHHHHHHhhhhchHHHHHHHHhHHHH----HHHHHHHH-----cCc---C--ccHHHHHHHHHHHHHhhhee
Q 039155 108 SDYFWALGVVRTSPLVAALGVSLTIPL----AMLEDMFI-----HHQ---H--YSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 108 ~~~l~~~al~~tsp~~~sv~l~L~ppl----a~i~d~i~-----~ge---~--ls~~~iiG~~LIl~G~~l~~ 166 (206)
+..+|.-+=...=|..-.+++.+...+ +.+.+|.. +|+ . -.+.+++|.+++++|..+-.
T Consensus 61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 333444433334455555566555555 66777764 232 2 35589999999999988755
No 80
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.37 E-value=23 Score=32.24 Aligned_cols=94 Identities=11% Similarity=0.023 Sum_probs=61.5
Q ss_pred hhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHH-HHHHhHHHHHHHHHHHHcCcC--ccH---
Q 039155 76 LTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAA-LGVSLTIPLAMLEDMFIHHQH--YSP--- 149 (206)
Q Consensus 76 l~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~s-v~l~L~ppla~i~d~i~~ge~--ls~--- 149 (206)
+.+.|.. .+..| .+|..++..+.+ .+.-....|.|++..++..++ ++--+---++.+.+.+++.|- .+.
T Consensus 213 lt~~g~~-ql~~~---~ty~~~l~~~~~-~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i 287 (335)
T KOG2922|consen 213 LTFSGNN-QLFYP---LTWIFLLVVATC-VSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI 287 (335)
T ss_pred HHhcCCc-ccccH---HHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 3445555 35555 678777666663 444555568999998866554 444444555777777777753 222
Q ss_pred -HHHHHHHHHHHHhhheeccccchhh
Q 039155 150 -IYIIGSVQNSSQNRWIDIAEFKTII 174 (206)
Q Consensus 150 -~~iiG~~LIl~G~~l~~~~~~~~~~ 174 (206)
..+.|.+.|+.|+.+++..++++.+
T Consensus 288 ~~~~~Gf~ti~~G~flL~~~kd~~~~ 313 (335)
T KOG2922|consen 288 AGELCGFVTIFLGIFLLHRTKDMEIS 313 (335)
T ss_pred HHHHHhHHHhhheeeEeeeecccccc
Confidence 4778999999999999866554443
No 81
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=78.53 E-value=6 Score=36.11 Aligned_cols=61 Identities=8% Similarity=0.068 Sum_probs=56.5
Q ss_pred HHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 107 VSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 107 l~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
+-|.++-.+....+|+.-.+.-.+-|..++++..++++++++..+|..-++.++|+.++..
T Consensus 104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 3445888999999999999999999999999999999999999999999999999999883
No 82
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=76.54 E-value=8.7 Score=34.58 Aligned_cols=64 Identities=11% Similarity=-0.026 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 104 GNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 104 ~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
|-..+..+.+.++.+|+++.--+.=--.+.++.+++.-+++..++..+|.|...+..|..++-.
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 4566778888999999988666655567889999999999999999999999999999988763
No 83
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=76.14 E-value=14 Score=33.33 Aligned_cols=77 Identities=12% Similarity=0.096 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
..|..+...+++ .+.-++.-.+..+.+|++..++.-......+.+...+++++++++..++|-.+=++|=.+-...+
T Consensus 226 ~~~~~~~lScv~-gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 226 SVLVVMLLSCVM-GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 456656666665 55555666777888888777766688888899999999999999999999877776666655443
No 84
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=75.25 E-value=3.8 Score=36.08 Aligned_cols=86 Identities=9% Similarity=-0.041 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHH-HHHHhHHHHHHHHHHHHcCcCccHHHH----HHHHHHHHHhhhee
Q 039155 92 KTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAA-LGVSLTIPLAMLEDMFIHHQHYSPIYI----IGSVQNSSQNRWID 166 (206)
Q Consensus 92 ~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~s-v~l~L~ppla~i~d~i~~ge~ls~~~i----iG~~LIl~G~~l~~ 166 (206)
+.|..-+..|++ =-+++..+..|+++.+.+.+. +.--+|-+.+.+++++.+||-.++.++ +.-++++.|+++..
T Consensus 57 ~~~iv~~isG~~-Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs 135 (288)
T COG4975 57 TIFIVGFISGAF-WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTS 135 (288)
T ss_pred hhHHHHHHhhhH-hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEee
Confidence 445444444444 234555556666555533321 233456788899999999999887543 45678999999999
Q ss_pred ccccchhhhhhh
Q 039155 167 IAEFKTIITTCV 178 (206)
Q Consensus 167 ~~~~~~~~~~~~ 178 (206)
++++++.++++.
T Consensus 136 ~~~~~nk~~~~~ 147 (288)
T COG4975 136 KQDRNNKEEENP 147 (288)
T ss_pred eeccccccccCh
Confidence 887644444443
No 85
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=73.28 E-value=5.8 Score=30.29 Aligned_cols=30 Identities=10% Similarity=-0.085 Sum_probs=25.8
Q ss_pred HHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 137 LEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 137 i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
.+++++.+|++++-++.|+++++.+++++-
T Consensus 78 ~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 78 PFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 345678899999999999999999998764
No 86
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=71.61 E-value=23 Score=31.02 Aligned_cols=90 Identities=11% Similarity=0.049 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHhhhc--CCCC---cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHH
Q 039155 65 TLVALWWLVWPLTAM--GIEP---KFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLED 139 (206)
Q Consensus 65 ~~l~l~p~~~il~~~--g~e~---~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d 139 (206)
+=+..+|+++.+.+. ++.+ ...+|.. ....++..|+ |++--.+.-.|-++.||++.-|+.-.|.-..-++.+
T Consensus 192 nNllslPiL~~~s~~~edws~~n~annl~~d--~l~am~ISgl-~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaG 268 (309)
T COG5070 192 NNLLSLPILLSFSFLFEDWSPGNLANNLSVD--SLMAMFISGL-CSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAG 268 (309)
T ss_pred hhhHHHHHHHHHHHHhccCCcchhhcCCChH--HHHHHHHHHH-HHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhh
Confidence 444445666655543 2332 0223332 3334566666 466666677899999999999999999988899999
Q ss_pred HHHcCcCccHHHHHHHHH
Q 039155 140 MFIHHQHYSPIYIIGSVQ 157 (206)
Q Consensus 140 ~i~~ge~ls~~~iiG~~L 157 (206)
.++++|+.+...+....+
T Consensus 269 lvffdap~nf~si~sill 286 (309)
T COG5070 269 LVFFDAPVNFLSIFSILL 286 (309)
T ss_pred hhhcCCchhHHHHHHHHH
Confidence 999999998887766433
No 87
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=70.78 E-value=71 Score=28.90 Aligned_cols=55 Identities=9% Similarity=-0.054 Sum_probs=48.0
Q ss_pred HHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 113 ~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
..++++.+--.-++.=.++|.+.++.+..+++.+++...+....++.+|-.....
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 4788899988888888899999999999999999999999888888888766553
No 88
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=66.26 E-value=9.5 Score=30.74 Aligned_cols=50 Identities=12% Similarity=-0.103 Sum_probs=28.0
Q ss_pred chHHHHHHHHhHHHHHHHH-----HHHHcCcCccHHHHHHHHHHHHHhhheeccccc
Q 039155 120 SPLVAALGVSLTIPLAMLE-----DMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFK 171 (206)
Q Consensus 120 sp~~~sv~l~L~ppla~i~-----d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~ 171 (206)
|+..+++..++.|++.+++ +.++++|.+... .+.....+||+++.+-.+|
T Consensus 73 slL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~~~~--~~~lg~~l~fl~~r~ysRk 127 (150)
T COG3086 73 SLLKSALLVYIFPLVGLFLGAILAQYLFFSELIVIF--GAFLGLALGFLLARRYSRK 127 (150)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 4455556666777775554 444556654433 3334466777777644443
No 89
>PRK02237 hypothetical protein; Provisional
Probab=66.02 E-value=13 Score=28.49 Aligned_cols=38 Identities=13% Similarity=-0.087 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 132 IPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 132 ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
+..+.+..|.+-+++++...++|+.+.++|+.++...+
T Consensus 70 I~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 70 VAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 45677888889999999999999999999998876543
No 90
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=64.57 E-value=27 Score=26.55 Aligned_cols=56 Identities=11% Similarity=0.044 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 106 FVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 106 vl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
=+++..+..++.++=-.++++.. =..++.+.++|++.+-++.|+.+++.|++++-+
T Consensus 60 RiG~~v~s~~QLK~mQEVItL~i------Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 60 RIGHQVYSAAQLKTMQEVITLAI------FVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred hhhhhhccHHHHHHHHHHHHHHH------HHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 34455555555554444444333 123456778999999999999999999998754
No 91
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=64.50 E-value=14 Score=28.22 Aligned_cols=38 Identities=16% Similarity=-0.003 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 132 IPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 132 ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
+..+.+-.|.+-+++++...++|+.+.++|..++...+
T Consensus 68 I~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 68 IVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 45677788888899999999999999999999887654
No 92
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=60.20 E-value=13 Score=33.31 Aligned_cols=45 Identities=9% Similarity=-0.062 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhhh
Q 039155 131 TIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIIT 175 (206)
Q Consensus 131 ~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~~ 175 (206)
++..+++..|++.|.+.+..++...++|-+|+++....+.++...
T Consensus 101 sll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 101 SLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred cHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 445689999999999999999999999999999999877766643
No 93
>COG2443 Sss1 Preprotein translocase subunit Sss1 [Intracellular trafficking and secretion]
Probab=54.89 E-value=2.9 Score=29.12 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=15.4
Q ss_pred hhhhcccccCCCCCccchhh
Q 039155 175 TTCVQQLWDCSTYSWDSYIA 194 (206)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~ 194 (206)
+++.+-+.-||+|+|++|..
T Consensus 16 ke~~rvl~~arKP~~eEy~~ 35 (65)
T COG2443 16 KEYRRVLKVARKPDWEEYSK 35 (65)
T ss_pred HHHHHHHHHHhCCCHHHHHH
Confidence 44555677899999999864
No 94
>PRK15015 carbon starvation protein A; Provisional
Probab=50.94 E-value=86 Score=31.33 Aligned_cols=63 Identities=21% Similarity=0.185 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccH---HHHHHHHHHHHHhhheec
Q 039155 98 IANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSP---IYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 98 l~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~---~~iiG~~LIl~G~~l~~~ 167 (206)
+.+|.+..++.+.+ .-+|-- .....+++|+++++++..+..+++. ..++|.+++++.++.-..
T Consensus 173 iviAvfalvvv~al------~~sP~~-~fsv~~tIpiAl~mG~~l~~~r~g~v~~~SiiGvvll~~aI~~G~~ 238 (701)
T PRK15015 173 IILAVLAMIVVKAL------THSPWG-TYTVAFTIPLALFMGIYLRYLRPGRIGEVSVIGLVFLIFAIISGGW 238 (701)
T ss_pred HHHHHHHHHHHHHH------hhCcHH-HHHHHHHHHHHHHHHHHheeecCCchHHHHHHHHHHHHHHHHHhHh
Confidence 34555544444443 233443 3344589999999999887665554 499999999988887654
No 95
>PF01350 Flavi_NS4A: Flavivirus non-structural protein NS4A; InterPro: IPR000404 Flaviviruses encode a single polyprotein. This is cleaved into three structural and seven non-structural proteins. The NS4A protein is small and poorly conserved among the Flaviviruses. NS4A contains multiple hydrophobic potential membrane spanning regions []. NS4A has only been found in cells infected by Kunjin virus [].; GO: 0016032 viral reproduction, 0016070 RNA metabolic process, 0044423 virion part
Probab=47.11 E-value=1.1e+02 Score=24.61 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=47.5
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhe
Q 039155 86 AFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWI 165 (206)
Q Consensus 86 ~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~ 165 (206)
+.|....+...+..+++. .-....+-++..+....+++. +....+. ...+.++ .++.++.|..++..=+..+
T Consensus 43 elPEAl~till~~ll~~~----T~G~~~~lm~~kgi~rm~lG~-~vm~~~~--~llw~gg-v~~~~IAg~~lv~filmvV 114 (144)
T PF01350_consen 43 ELPEALETILLVVLLGVM----TLGVFWFLMRRKGIGRMSLGM-LVMAVAG--YLLWMGG-VPPGQIAGVLLVFFILMVV 114 (144)
T ss_pred hCcHHHHHHHHHHHHHHH----HHHHHHhhhcCCCcchhhHHH-HHHHHHH--HHHHhcC-CcHHHhHHHHHHHHHHHHh
Confidence 467654444434444442 223344556777888888887 2222222 2233344 6889999999888877777
Q ss_pred eccccchh
Q 039155 166 DIAEFKTI 173 (206)
Q Consensus 166 ~~~~~~~~ 173 (206)
..++..++
T Consensus 115 LiPEpg~Q 122 (144)
T PF01350_consen 115 LIPEPGKQ 122 (144)
T ss_pred cccCCCCc
Confidence 77766444
No 96
>KOG2489 consensus Transmembrane protein [General function prediction only]
Probab=45.92 E-value=73 Score=30.83 Aligned_cols=71 Identities=13% Similarity=0.213 Sum_probs=43.6
Q ss_pred chhHHHHHHHHHHHHHhc---CCCc--cc--hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHH
Q 039155 30 LVGDLFALLSAMTYGLFT---GRRK--LD--MQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGF 102 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~---~~~~--~~--~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl 102 (206)
-++-+|--+ -++||+|. .+.| .+ .+++.+++..|+++++.|-+++ ++= .-+.-++| |=.+.+.++
T Consensus 439 YLs~~L~PL-~vg~aVYSLlY~~hKsWYSWvLn~l~~~vy~FGFi~M~PQLFI-NYK-LKSVAHLP-----WR~~tYKa~ 510 (592)
T KOG2489|consen 439 YLSYLLFPL-LVGGAVYSLLYVEHKSWYSWVLNSLYNGVYAFGFIFMLPQLFI-NYK-LKSVAHLP-----WRAFTYKAF 510 (592)
T ss_pred HHHHHHHHH-HHHHHHHhhhhcccccHHHHHHHHHHhHHHHHHHHHhChHHHh-hhh-hhhhhcCc-----HHHHHHHHH
Confidence 356655544 36888888 3434 44 5678889999999999999887 221 11123343 555656555
Q ss_pred HHHHHHH
Q 039155 103 VGNFVSD 109 (206)
Q Consensus 103 ~~svl~~ 109 (206)
.|+|=+
T Consensus 511 -NTFIDD 516 (592)
T KOG2489|consen 511 -NTFIDD 516 (592)
T ss_pred -HHHHHH
Confidence 355554
No 97
>KOG1766 consensus Enhancer of rudimentary [General function prediction only]
Probab=42.33 E-value=12 Score=28.08 Aligned_cols=16 Identities=44% Similarity=1.016 Sum_probs=13.3
Q ss_pred ccchhhhchhHHHhhh
Q 039155 189 WDSYIAYTADWISQKL 204 (206)
Q Consensus 189 ~~~~~~~~~~~~~~~~ 204 (206)
-.-|+-|..+|||||.
T Consensus 76 t~tY~pynk~wIKeki 91 (104)
T KOG1766|consen 76 TGTYIPYNKDWIKEKI 91 (104)
T ss_pred cccccCccHHHHHHHH
Confidence 4568999999999974
No 98
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=39.06 E-value=3.5e+02 Score=25.82 Aligned_cols=58 Identities=5% Similarity=-0.174 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchhhhhhhcccccCCCCC
Q 039155 131 TIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTIITTCVQQLWDCSTYS 188 (206)
Q Consensus 131 ~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~~~~~~~~~~~~~~~~ 188 (206)
.|.-+.+.+.+.-.-.......++++.++++..+..+.+-++.++.+.+...|..+|.
T Consensus 356 ~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~~~~~d~~~~~~~~~p~ 413 (524)
T PF05977_consen 356 MPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQGEELDLDPSEHWPEPE 413 (524)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCccccCCCCC
Confidence 3444555555543333334445555555555555544444444333334444444444
No 99
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=37.27 E-value=13 Score=33.45 Aligned_cols=57 Identities=16% Similarity=-0.070 Sum_probs=48.0
Q ss_pred HHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccc
Q 039155 113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAE 169 (206)
Q Consensus 113 ~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~ 169 (206)
|+-+++.+-.+=-++=+++-||+.+..+++++++-+...+.++.+|+.||.+-...|
T Consensus 120 nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE 176 (347)
T KOG1442|consen 120 NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQE 176 (347)
T ss_pred ceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccc
Confidence 455666666666667789999999999999999999999999999999999876554
No 100
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=36.06 E-value=56 Score=25.19 Aligned_cols=39 Identities=10% Similarity=0.020 Sum_probs=31.2
Q ss_pred HHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhhe
Q 039155 127 GVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWI 165 (206)
Q Consensus 127 ~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~ 165 (206)
-.+++..++++.+..+..|...-..+.|..+|+.|+.+-
T Consensus 85 ~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 85 TNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred cchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 345666788889988866777788999999999998763
No 101
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long.
Probab=35.68 E-value=77 Score=26.95 Aligned_cols=23 Identities=9% Similarity=-0.153 Sum_probs=19.7
Q ss_pred CcCccHHHHHHHHHHHHHhhhee
Q 039155 144 HQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 144 ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
++.++...++|.++.++|+.+=.
T Consensus 114 ~~~~~~~~~~g~~l~~~g~~~E~ 136 (235)
T PF06966_consen 114 NPPLNWLDILGIALFLIGFLLET 136 (235)
T ss_pred cCcchHHHHHHHHHHHHHHHHHH
Confidence 45788999999999999998744
No 102
>TIGR00327 secE_euk_arch protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic. This model describes archaeal SEC61-like and eukaryotic SEC61 but not bacterial secE proteins, for which a Pfam pfam00584 (SecE) has been created.
Probab=33.57 E-value=11 Score=25.97 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=17.9
Q ss_pred chhhhhhhcccccCCCCCccchhh
Q 039155 171 KTIITTCVQQLWDCSTYSWDSYIA 194 (206)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~ 194 (206)
++--+++++-+..||+|++++|..
T Consensus 7 ~~f~k~~~r~lk~~~KPd~~Ef~~ 30 (61)
T TIGR00327 7 VEFIKEGTRVLAVCKKPDLEEYLK 30 (61)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHH
Confidence 344456677788999999999853
No 103
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=33.48 E-value=41 Score=23.59 Aligned_cols=18 Identities=22% Similarity=0.530 Sum_probs=16.5
Q ss_pred chhHHHHHHHHHHHHHhc
Q 039155 30 LVGDLFALLSAMTYGLFT 47 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~ 47 (206)
++|.+.++++.+.||+|.
T Consensus 7 Li~ICVaii~lIlY~iYn 24 (68)
T PF05961_consen 7 LIIICVAIIGLILYGIYN 24 (68)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 578889999999999999
No 104
>PRK09400 secE preprotein translocase subunit SecE; Reviewed
Probab=32.30 E-value=12 Score=25.60 Aligned_cols=24 Identities=8% Similarity=0.136 Sum_probs=17.5
Q ss_pred chhhhhhhcccccCCCCCccchhh
Q 039155 171 KTIITTCVQQLWDCSTYSWDSYIA 194 (206)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~ 194 (206)
++.-+++++-+..||+|++++|..
T Consensus 11 ~~f~~d~~rvl~~~~KPd~~Ef~~ 34 (61)
T PRK09400 11 KNFLEDYKRVLKVARKPTREEFLL 34 (61)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHH
Confidence 334455666778999999999853
No 105
>PTZ00478 Sec superfamily; Provisional
Probab=30.50 E-value=14 Score=26.83 Aligned_cols=24 Identities=8% Similarity=0.228 Sum_probs=18.3
Q ss_pred chhhhhhhcccccCCCCCccchhh
Q 039155 171 KTIITTCVQQLWDCSTYSWDSYIA 194 (206)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~ 194 (206)
++--+++++-+..|++|++++|..
T Consensus 24 ~eF~kds~r~vkrctKPdrkEf~k 47 (81)
T PTZ00478 24 QEFANDSRRLIRKCTKPDAKEYTN 47 (81)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHH
Confidence 444466777888999999999863
No 106
>PRK09577 multidrug efflux protein; Reviewed
Probab=30.04 E-value=2.8e+02 Score=28.90 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=35.2
Q ss_pred hhchHHHHHHHHhHHHHHH---HHHHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 118 RTSPLVAALGVSLTIPLAM---LEDMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 118 ~tsp~~~sv~l~L~ppla~---i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
....-...+..++++|++. +.+.++.|.+++...++|.+ +++|+..=|
T Consensus 885 ~F~S~~~plii~~~iPl~l~G~~~~l~l~g~~l~~~s~~G~i-~L~GivVnn 935 (1032)
T PRK09577 885 LYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLI-ATIGLSAKN 935 (1032)
T ss_pred HHHhHHhHHHHHHHhhHHHHHHHHHHHHhCCCccHHHHHHHH-HHHHHHHcC
Confidence 3555556667778888855 45566679999999999987 788886543
No 107
>COG3856 Sbp Uncharacterized conserved protein (small basic protein) [Function unknown]
Probab=29.72 E-value=2.5e+02 Score=21.32 Aligned_cols=78 Identities=13% Similarity=-0.031 Sum_probs=55.0
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhh
Q 039155 85 FAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRW 164 (206)
Q Consensus 85 ~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l 164 (206)
+..|+.-+++..+..++.+.++++. .=.+-.+...|-.--.++...+.+++.. .+.|.++..-.++ +..+..|+-+
T Consensus 20 ~~vPd~~spYlsiAv~AaLDtvfGg-iRA~L~~~fd~~vFvsgFffNiilA~~l--vylGd~LGv~~yL-A~i~vfGvRi 95 (113)
T COG3856 20 PGVPDVYSPYLSIAVLAALDTVFGG-IRAYLQRTFDPKVFVSGFFFNIILAASL--VYLGDQLGVDLYL-AAIFVFGVRI 95 (113)
T ss_pred CCCchhhccchHHHHHHHHHHHHHH-HHHHHHhhcCCCeeehHHHHHHHHHHHH--HHHhhhcCcchHH-HHHHHHHHHH
Confidence 5677777788999999999988875 3455556666655555666777776654 4568888877777 5566777766
Q ss_pred ee
Q 039155 165 ID 166 (206)
Q Consensus 165 ~~ 166 (206)
-+
T Consensus 96 F~ 97 (113)
T COG3856 96 FN 97 (113)
T ss_pred hc
Confidence 65
No 108
>PRK09579 multidrug efflux protein; Reviewed
Probab=28.03 E-value=3.3e+02 Score=28.37 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=33.6
Q ss_pred hhchHHHHHHHHhHHHHHHHH---HHHHcCcCccHHHHHHHHHHHHHhhhee
Q 039155 118 RTSPLVAALGVSLTIPLAMLE---DMFIHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 118 ~tsp~~~sv~l~L~ppla~i~---d~i~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
........+..++++|++.+. +.++.+.+++....+| +++++|+..=|
T Consensus 864 ~f~S~~~pliI~~~iPla~~G~~~~L~i~~~~l~~~s~~G-~i~L~GivVnn 914 (1017)
T PRK09579 864 QFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVG-LVTLIGLISKH 914 (1017)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHH-HHHHHHHHHcC
Confidence 345556666777888886544 4455689999999988 56777886644
No 109
>PF01133 ER: Enhancer of rudimentary; InterPro: IPR000781 The Drosophila protein 'enhancer of rudimentary' (gene (e(r)) is a small protein of 104 residues whose function is not yet clear. From an evolutionary point of view, it is highly conserved [] and has been found to exist in probably all multicellular eukaryotic organisms. It has been proposed that this protein plays a role in the cell cycle.; GO: 0007049 cell cycle; PDB: 1W9G_A 2NML_A 1WWQ_A 1WZ7_B.
Probab=26.16 E-value=30 Score=26.20 Aligned_cols=19 Identities=26% Similarity=0.630 Sum_probs=15.3
Q ss_pred CCCccchhhhchhHHHhhh
Q 039155 186 TYSWDSYIAYTADWISQKL 204 (206)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~ 204 (206)
.++...|+-|..+|||+|+
T Consensus 73 ~~~~~~Y~P~nK~WIKeki 91 (102)
T PF01133_consen 73 DKSTNAYVPHNKQWIKEKI 91 (102)
T ss_dssp ETTTTEEEEE-HHHHHHHH
T ss_pred eCCCCccCCCCHHHHHHHH
Confidence 3668899999999999875
No 110
>COG4709 Predicted membrane protein [Function unknown]
Probab=25.72 E-value=3.5e+02 Score=22.85 Aligned_cols=16 Identities=19% Similarity=0.011 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHhhhe
Q 039155 150 IYIIGSVQNSSQNRWI 165 (206)
Q Consensus 150 ~~iiG~~LIl~G~~l~ 165 (206)
...+|..+..+++.++
T Consensus 151 f~~IGs~lLgl~~~~~ 166 (195)
T COG4709 151 FIGIGSLLLGLGLGIV 166 (195)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4456666665555543
No 111
>TIGR02921 PEP_integral PEP-CTERM family integral membrane protein. Members of this protein family, found in three different species so far, have a PEP-CTERM sequence at the carboxyl-terminus (see model TIGR02595), but are unusual among PEP-CTERM proteins in having multiple predicted transmembrane segments. The function is unknown. It is proposed that a member of the EpsH family, to be designated exosortase (see TIGR02602), recognizes and cleaves PEP-CTERM proteins in a manner analogous to the cleavage of LPXTG proteins by sortase (see Haft, et al., 2006).
Probab=25.54 E-value=7.1e+02 Score=25.15 Aligned_cols=130 Identities=15% Similarity=0.163 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHhcCCCccc-------hHHHHHHHHHHHHHH----HHHHHHHhhhcCCCCcccCCCCHHHHHHHH-
Q 039155 31 VGDLFALLSAMTYGLFTGRRKLD-------MQKLVGCIGLFTLVA----LWWLVWPLTAMGIEPKFAFPHSAKTAEIII- 98 (206)
Q Consensus 31 lGd~LaLlsA~~yAlY~~~~~~~-------~~~~~g~vgl~~~l~----l~p~~~il~~~g~e~~~~~P~~~~~w~~ll- 98 (206)
+|..++-..|-+|+.|..+.++. ..+.|-..|+++..+ .+|....... -.| +.++-+-...|-+++
T Consensus 114 ~~i~i~a~~~~l~~g~~sr~~~glqw~~l~~~~~ml~~giy~~~~l~~~~ip~~~gff~-l~~-~i~~~~~~~i~nyil~ 191 (952)
T TIGR02921 114 IGIAIAAFAACLFGGVASRFKIGLQWLQLLAAMLMLLFGIYAAALLAFFAIPAAAGFFE-LLE-EIEFEHLGDIFNYILF 191 (952)
T ss_pred HHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhHHHH-HHH-HHHHHhHHHHHHHHHH
Confidence 57777777777888887544432 223333334433333 3343331111 122 122222234566454
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHHHH----H---HcCcCccHHHHHHHHHHHHHhhhee
Q 039155 99 ANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLEDM----F---IHHQHYSPIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 99 ~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~d~----i---~~ge~ls~~~iiG~~LIl~G~~l~~ 166 (206)
-.+++|.++--.+|...+..+- ++++.|--.++++.-- . +-.|+=......|+.-|++.+.++.
T Consensus 192 ~~a~i~glfiismwlivla~s~----~~fi~lp~~lt~lyi~~~~k~~k~~~a~~g~~ka~a~aa~ii~~~a~~f 262 (952)
T TIGR02921 192 HTAFICGLFIISMWLIVLAFSA----TLFIALPFALTALYIHEFAKELKAAAAEHGNAKAFAGAAAIIAAFALLF 262 (952)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhHHHHHHHHHHHH
Confidence 3566666655555555443332 3333332222222110 0 1123334445666666666665544
No 112
>PHA03049 IMV membrane protein; Provisional
Probab=23.50 E-value=78 Score=22.14 Aligned_cols=18 Identities=22% Similarity=0.517 Sum_probs=16.1
Q ss_pred chhHHHHHHHHHHHHHhc
Q 039155 30 LVGDLFALLSAMTYGLFT 47 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~ 47 (206)
+++.+.++++.+.||+|.
T Consensus 7 l~iICVaIi~lIvYgiYn 24 (68)
T PHA03049 7 LVIICVVIIGLIVYGIYN 24 (68)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 567888999999999999
No 113
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=23.40 E-value=3.9e+02 Score=21.38 Aligned_cols=17 Identities=18% Similarity=-0.078 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhhheecc
Q 039155 152 IIGSVQNSSQNRWIDIA 168 (206)
Q Consensus 152 iiG~~LIl~G~~l~~~~ 168 (206)
.+|.+|+..|++.....
T Consensus 47 Alg~vL~~~g~~~~~~~ 63 (191)
T PF04156_consen 47 ALGVVLLSLGLLCLLSK 63 (191)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 35788888888776533
No 114
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=23.27 E-value=1.3e+02 Score=23.01 Aligned_cols=39 Identities=10% Similarity=-0.104 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheecccc
Q 039155 132 IPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEF 170 (206)
Q Consensus 132 ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~ 170 (206)
+..+.+-.+++-+..++-..++|+.+-++|+.++...++
T Consensus 69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 466778888888999999999999999999888776543
No 115
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=21.98 E-value=5.5e+02 Score=22.63 Aligned_cols=61 Identities=7% Similarity=0.013 Sum_probs=52.5
Q ss_pred HHHhhhhchHHHHHHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheeccccchh
Q 039155 113 ALGVVRTSPLVAALGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDIAEFKTI 173 (206)
Q Consensus 113 ~~al~~tsp~~~sv~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~~~~~~~ 173 (206)
..++.++.-..-+++=.+++.+-+.....++|.+.+.......++.+.+=+..++++.+..
T Consensus 86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~ 146 (309)
T COG5070 86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQAS 146 (309)
T ss_pred ccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHH
Confidence 4777788877888899999999999999999999999999999999999888887766443
No 116
>PF11118 DUF2627: Protein of unknown function (DUF2627); InterPro: IPR020138 This entry represents uncharacterised membrane proteins with no known function.
Probab=21.61 E-value=2.1e+02 Score=20.53 Aligned_cols=18 Identities=11% Similarity=0.130 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHhhhee
Q 039155 149 PIYIIGSVQNSSQNRWID 166 (206)
Q Consensus 149 ~~~iiG~~LIl~G~~l~~ 166 (206)
.+.+.|.++..+|+.++-
T Consensus 41 lqfl~G~~lf~~G~~Fi~ 58 (77)
T PF11118_consen 41 LQFLAGLLLFAIGVGFIA 58 (77)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 356667777777776544
No 117
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=21.40 E-value=6.8e+02 Score=24.19 Aligned_cols=108 Identities=19% Similarity=0.220 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH--------HHHhhhhchHHHH
Q 039155 54 MQKLVGCIGLFTLVALWWLVWPLTAMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFW--------ALGVVRTSPLVAA 125 (206)
Q Consensus 54 ~~~~~g~vgl~~~l~l~p~~~il~~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~--------~~al~~tsp~~~s 125 (206)
+-.+....+..+.+..|-+..+.+...++. +.-..++.....-+.-|+++++++..+- +-.-.+.++...+
T Consensus 250 sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~-~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~ 328 (493)
T KOG1330|consen 250 SLGIIAAQFVIGSLSWWAPAFIYYSYELIG-FDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAA 328 (493)
T ss_pred hHHHHHHHHhccccchhhhhHHHHHHHHhC-CccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHh
Confidence 334556667777777775555544443331 2221111111111333333333333333 3355666677766
Q ss_pred HHHHhHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHhhheec
Q 039155 126 LGVSLTIPLAMLEDMFIHHQHYSPIYIIGSVQNSSQNRWIDI 167 (206)
Q Consensus 126 v~l~L~ppla~i~d~i~~ge~ls~~~iiG~~LIl~G~~l~~~ 167 (206)
++..+.+|+=.+.... .....+.|-+|+++|..+.-.
T Consensus 329 ~g~~~s~~~L~~~~~~-----~~~s~~~~~il~~~g~~~~~~ 365 (493)
T KOG1330|consen 329 LGAPLSIPFLFLFPAF-----TSSSMIFGLILFLVGETISWF 365 (493)
T ss_pred hhhhHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHhc
Confidence 6665555554333322 235667788889988877653
Done!