Query 039155
Match_columns 206
No_of_seqs 115 out of 552
Neff 6.4
Searched_HMMs 13730
Date Mon Mar 25 11:17:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039155.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039155hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rh5b_ f.23.28.1 (B:) Preprot 49.4 1.3 9.2E-05 27.5 -0.6 20 174-193 5-24 (56)
2 d2e74g1 f.23.26.1 (G:9-35) Pet 41.0 10 0.00076 19.3 2.4 18 30-47 2-19 (27)
3 d1iwga8 f.35.1.1 (A:513-566,A: 29.1 1E+02 0.0073 22.6 8.1 79 78-164 44-125 (222)
4 d2nmla1 d.330.1.1 (A:2-101) En 22.1 12 0.00088 25.4 0.7 19 186-204 72-90 (100)
5 d1eq9a_ b.47.1.2 (A:) (alpha,g 12.9 35 0.0026 23.9 1.5 17 189-206 206-222 (222)
6 d1et9a1 b.40.2.2 (A:1-95) Stre 9.2 44 0.0032 21.2 0.7 12 194-205 51-62 (95)
7 d1w36c1 c.37.1.19 (C:1-347) Ex 8.5 43 0.0031 26.9 0.5 14 189-202 135-148 (347)
8 d1dcqa2 g.45.1.1 (A:247-368) P 8.5 74 0.0054 21.4 1.8 21 185-205 93-113 (122)
9 g2pka.1 b.47.1.2 (A:,B:) Kalli 7.6 72 0.0053 22.5 1.5 14 193-206 217-230 (232)
10 d1pi1a_ a.29.7.1 (A:) Mob1a {H 6.3 80 0.0059 23.1 1.1 16 191-206 82-97 (185)
No 1
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=49.44 E-value=1.3 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.303 Sum_probs=16.0
Q ss_pred hhhhhcccccCCCCCccchh
Q 039155 174 ITTCVQQLWDCSTYSWDSYI 193 (206)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~ 193 (206)
-+++++-+..||+|+|++|.
T Consensus 5 ~~es~Rvlk~~~KP~~~Ef~ 24 (56)
T d1rh5b_ 5 IEECRRVWLVLKKPTKDEYL 24 (56)
T ss_dssp HHHHHHHHHSEECCCHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHH
Confidence 35567778899999999885
No 2
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=41.03 E-value=10 Score=19.25 Aligned_cols=18 Identities=28% Similarity=0.626 Sum_probs=16.1
Q ss_pred chhHHHHHHHHHHHHHhc
Q 039155 30 LVGDLFALLSAMTYGLFT 47 (206)
Q Consensus 30 ~lGd~LaLlsA~~yAlY~ 47 (206)
.+|-+.+-++.++||.|.
T Consensus 2 vlgli~~tl~glf~aayq 19 (27)
T d2e74g1 2 VLGLVFATLGGLFYAAYQ 19 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred eeeehHHHHHHHHHHHHH
Confidence 478899999999999998
No 3
>d1iwga8 f.35.1.1 (A:513-566,A:869-1036) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=29.15 E-value=1e+02 Score=22.58 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=41.6
Q ss_pred hcCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHhHHHHHHHH---HHHHcCcCccHHHHHH
Q 039155 78 AMGIEPKFAFPHSAKTAEIIIANGFVGNFVSDYFWALGVVRTSPLVAALGVSLTIPLAMLE---DMFIHHQHYSPIYIIG 154 (206)
Q Consensus 78 ~~g~e~~~~~P~~~~~w~~ll~lgl~~svl~~~l~~~al~~tsp~~~sv~l~L~ppla~i~---d~i~~ge~ls~~~iiG 154 (206)
+.+.+ ...+|+.......++..+++ ++. +.... ...+...++...+.+|++.+. ...+.+..++....+|
T Consensus 44 f~~lp-~~fl~~~~~~~~~~~~la~i--~i~--liL~~--~frS~~~~liv~~~ipl~~~~~~~~l~~~g~~~~~~~~~g 116 (222)
T d1iwga8 44 FVRLP-SSFLPDSGNQAPSLYAISLI--VVF--LCLAA--LYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVG 116 (222)
T ss_dssp HHSSC-BCSSCCCCTTHHHHHHHHHH--HHH--HHHHH--TTCSSSHHHHGGGHHHHHHHHHHHHHHHTTCCBCHHHHHH
T ss_pred eccCc-HHHHHHhhhHHHHHHHHHHH--HHH--HHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhccc
Confidence 34444 34456544444445555554 221 11111 233444555566677776553 4445688899888777
Q ss_pred HHHHHHHhhh
Q 039155 155 SVQNSSQNRW 164 (206)
Q Consensus 155 ~~LIl~G~~l 164 (206)
.++ ++|...
T Consensus 117 ~i~-l~Gi~v 125 (222)
T d1iwga8 117 LLT-TIGLSA 125 (222)
T ss_dssp HHH-HHHHHH
T ss_pred ccc-hhhhhh
Confidence 665 445444
No 4
>d2nmla1 d.330.1.1 (A:2-101) Enhancer of rudimentary homolog, ERH {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.11 E-value=12 Score=25.42 Aligned_cols=19 Identities=32% Similarity=0.734 Sum_probs=15.8
Q ss_pred CCCccchhhhchhHHHhhh
Q 039155 186 TYSWDSYIAYTADWISQKL 204 (206)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~ 204 (206)
.++.+.|.-|.-+|||+|+
T Consensus 72 ~~~t~~Y~P~nk~WIKeki 90 (100)
T d2nmla1 72 RADTQTYQPYNKDWIKEKI 90 (100)
T ss_dssp ETTTTEEEEECHHHHHHHH
T ss_pred eCCCCccCCCCHHHHHHHH
Confidence 3557889999999999875
No 5
>d1eq9a_ b.47.1.2 (A:) (alpha,gamma)-chymotrypsin(ogen) {Red fire ant (Solenopsis invicta) [TaxId: 13686]}
Probab=12.93 E-value=35 Score=23.90 Aligned_cols=17 Identities=24% Similarity=0.733 Sum_probs=12.9
Q ss_pred ccchhhhchhHHHhhhcC
Q 039155 189 WDSYIAYTADWISQKLKR 206 (206)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~ 206 (206)
.-++..| .+||+|++||
T Consensus 206 yt~v~~y-~~WI~~~i~~ 222 (222)
T d1eq9a_ 206 YTRVSSF-VSWINANLKK 222 (222)
T ss_dssp EEEGGGG-HHHHHHTSCC
T ss_pred EEEHHHH-HHHHHHHhcC
Confidence 3455566 5999999997
No 6
>d1et9a1 b.40.2.2 (A:1-95) Streptococcal superantigen Spe-H {Streptococcus pyogenes [TaxId: 1314]}
Probab=9.16 E-value=44 Score=21.24 Aligned_cols=12 Identities=50% Similarity=1.013 Sum_probs=9.6
Q ss_pred hhchhHHHhhhc
Q 039155 194 AYTADWISQKLK 205 (206)
Q Consensus 194 ~~~~~~~~~~~~ 205 (206)
-+..|||+|..|
T Consensus 51 ffekdwisqefk 62 (95)
T d1et9a1 51 FFEKDWISQEFK 62 (95)
T ss_dssp ECSSTHHHHHHT
T ss_pred Eeehhhhhhhhc
Confidence 367899999876
No 7
>d1w36c1 c.37.1.19 (C:1-347) Exodeoxyribonuclease V gamma chain (RecC), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=8.51 E-value=43 Score=26.88 Aligned_cols=14 Identities=43% Similarity=1.251 Sum_probs=12.8
Q ss_pred ccchhhhchhHHHh
Q 039155 189 WDSYIAYTADWISQ 202 (206)
Q Consensus 189 ~~~~~~~~~~~~~~ 202 (206)
.|+|.-||.|||.+
T Consensus 135 FdqY~~yRPdwl~~ 148 (347)
T d1w36c1 135 FDQYLVYRPDWLAQ 148 (347)
T ss_dssp HHHHTTSSHHHHHH
T ss_pred HHHHHhcCHHHHHH
Confidence 79999999999975
No 8
>d1dcqa2 g.45.1.1 (A:247-368) Pyk2-associated protein beta ARF-GAP domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.49 E-value=74 Score=21.41 Aligned_cols=21 Identities=19% Similarity=0.101 Sum_probs=16.4
Q ss_pred CCCCccchhhhchhHHHhhhc
Q 039155 185 STYSWDSYIAYTADWISQKLK 205 (206)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~ 205 (206)
++|+.++-..+|.+||++|-.
T Consensus 93 ~kp~~~~~~~~r~~fI~~KY~ 113 (122)
T d1dcqa2 93 VKPNPGSDMIARKDYITAKYM 113 (122)
T ss_dssp CSCCTTCCHHHHHHHHHHHHT
T ss_pred cCCCCCccHHHHHHHHHHHHH
Confidence 357777788899999998853
No 9
>g2pka.1 b.47.1.2 (A:,B:) Kallikrein A {Pig (Sus scrofa) [TaxId: 9823]}
Probab=7.56 E-value=72 Score=22.51 Aligned_cols=14 Identities=21% Similarity=0.755 Sum_probs=11.7
Q ss_pred hhhchhHHHhhhcC
Q 039155 193 IAYTADWISQKLKR 206 (206)
Q Consensus 193 ~~~~~~~~~~~~~~ 206 (206)
+++-.+||+|.+||
T Consensus 217 V~~~~~WI~~~i~~ 230 (232)
T g2pka.1 217 LIFYLDWIDDTITE 230 (232)
T ss_dssp GGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67788999999874
No 10
>d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.34 E-value=80 Score=23.13 Aligned_cols=16 Identities=31% Similarity=0.864 Sum_probs=0.0
Q ss_pred chhhhchhHHHhhhcC
Q 039155 191 SYIAYTADWISQKLKR 206 (206)
Q Consensus 191 ~~~~~~~~~~~~~~~~ 206 (206)
+||+|.-+|+.+++..
T Consensus 82 ~Yi~~~~~w~~~~l~d 97 (185)
T d1pi1a_ 82 KYIDYLMTWVQDQLDD 97 (185)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhccC
Done!