BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039157
(207 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q835R5|DNAJ_ENTFA Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC 700802
/ V583) GN=dnaJ PE=3 SV=1
Length = 389
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLS 131
+ +Y VLGL +G +EI K Y LS + P++ + + K V+EA+EVLS
Sbjct: 5 RDYYEVLGLAKG-----ASDDEIKKAYRKLSKKYH-PDINKEADAEEKFKEVSEAYEVLS 58
Query: 132 DARRKEAYD 140
D ++K AYD
Sbjct: 59 DPQKKAAYD 67
>sp|B9E6X0|DNAJ_MACCJ Chaperone protein DnaJ OS=Macrococcus caseolyticus (strain
JCSC5402) GN=dnaJ PE=3 SV=1
Length = 372
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLS 131
+ +Y VLGL +G A++ EEI + Y+ LS + P++ + ++ K + EA+EVLS
Sbjct: 4 RDYYEVLGLSKG----ASK-EEIKRAYKKLSKKYH-PDINKEADAEDKFKEIAEAYEVLS 57
Query: 132 DARRKEAYDLL 142
D ++K YD
Sbjct: 58 DDQKKAQYDQF 68
>sp|Q253T6|DNAJ_CHLFF Chaperone protein DnaJ OS=Chlamydophila felis (strain Fe/C-56)
GN=dnaJ PE=3 SV=1
Length = 391
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 74 WYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDA 133
+Y VLG+ + EEI K Y L+ + E + K V+EA+EVLSDA
Sbjct: 3 YYDVLGVSK-----TASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDA 57
Query: 134 RRKEAYD 140
+++E+YD
Sbjct: 58 QKRESYD 64
>sp|A9MH53|CBPA_SALAR Curved DNA-binding protein OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|P63263|CBPA_SALTY Curved DNA-binding protein OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|P63262|CBPA_SALTI Curved DNA-binding protein OS=Salmonella typhi GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B4TSM3|CBPA_SALSV Curved DNA-binding protein OS=Salmonella schwarzengrund (strain
CVM19633) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B5BBH2|CBPA_SALPK Curved DNA-binding protein OS=Salmonella paratyphi A (strain
AKU_12601) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|C0Q893|CBPA_SALPC Curved DNA-binding protein OS=Salmonella paratyphi C (strain
RKS4594) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|A9N6S2|CBPA_SALPB Curved DNA-binding protein OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|Q5PGA2|CBPA_SALPA Curved DNA-binding protein OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B4T2U5|CBPA_SALNS Curved DNA-binding protein OS=Salmonella newport (strain SL254)
GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B4TEN5|CBPA_SALHS Curved DNA-binding protein OS=Salmonella heidelberg (strain SL476)
GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B5R6G3|CBPA_SALG2 Curved DNA-binding protein OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B5R049|CBPA_SALEP Curved DNA-binding protein OS=Salmonella enteritidis PT4 (strain
P125109) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B5FR40|CBPA_SALDC Curved DNA-binding protein OS=Salmonella dublin (strain
CT_02021853) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|B5F1Z5|CBPA_SALA4 Curved DNA-binding protein OS=Salmonella agona (strain SL483)
GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|A8AI78|CBPA_CITK8 Curved DNA-binding protein OS=Citrobacter koseri (strain ATCC
BAA-895 / CDC 4225-83 / SGSC4696) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|Q32HR2|CBPA_SHIDS Curved DNA-binding protein OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEAHFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQFVKS 161
LSD +R+ YD + +N+ N QF S
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQFHHS 84
>sp|B7LFA9|CBPA_ECO55 Curved DNA-binding protein OS=Escherichia coli (strain 55989 /
EAEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQFVKS 161
LSD +R+ YD + +N+ N QF S
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQFHHS 84
>sp|B2TTP8|CBPA_SHIB3 Curved DNA-binding protein OS=Shigella boydii serotype 18 (strain
CDC 3083-94 / BS512) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q31YR1|CBPA_SHIBS Curved DNA-binding protein OS=Shigella boydii serotype 4 (strain
Sb227) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B6I976|CBPA_ECOSE Curved DNA-binding protein OS=Escherichia coli (strain SE11)
GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B7M8Y3|CBPA_ECO8A Curved DNA-binding protein OS=Escherichia coli O8 (strain IAI1)
GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|A7ZKA5|CBPA_ECO24 Curved DNA-binding protein OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q7C254|CBPA_SHIFL Curved DNA-binding protein OS=Shigella flexneri GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q0T634|CBPA_SHIF8 Curved DNA-binding protein OS=Shigella flexneri serotype 5b (strain
8401) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q1RDL6|CBPA_ECOUT Curved DNA-binding protein OS=Escherichia coli (strain UTI89 /
UPEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|P36659|CBPA_ECOLI Curved DNA-binding protein OS=Escherichia coli (strain K12) GN=cbpA
PE=1 SV=2
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B1IV97|CBPA_ECOLC Curved DNA-binding protein OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q8FJ50|CBPA_ECOL6 Curved DNA-binding protein OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q0TJ66|CBPA_ECOL5 Curved DNA-binding protein OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|A1A9Q7|CBPA_ECOK1 Curved DNA-binding protein OS=Escherichia coli O1:K1 / APEC GN=cbpA
PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|A7ZYV2|CBPA_ECOHS Curved DNA-binding protein OS=Escherichia coli O9:H4 (strain HS)
GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B1X8V5|CBPA_ECODH Curved DNA-binding protein OS=Escherichia coli (strain K12 / DH10B)
GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|C4ZQC8|CBPA_ECOBW Curved DNA-binding protein OS=Escherichia coli (strain K12 / MC4100
/ BW2952) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B7MPT2|CBPA_ECO81 Curved DNA-binding protein OS=Escherichia coli O81 (strain ED1a)
GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B7MIE6|CBPA_ECO45 Curved DNA-binding protein OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|B7UNY3|CBPA_ECO27 Curved DNA-binding protein OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|O87778|DNAJ_LACSK Chaperone protein DnaJ OS=Lactobacillus sakei GN=dnaJ PE=2 SV=1
Length = 383
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 69 SETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWE 128
+E + +Y VLG+ G +EI K Y LS + P++ + + K VTEA+E
Sbjct: 2 AEKRDYYDVLGV-----GRDASDDEIKKAYRKLSKKYH-PDINKAPDAEAKFKEVTEAYE 55
Query: 129 VLSDARRKEAYD 140
LSD +++ AYD
Sbjct: 56 ALSDPQKRAAYD 67
>sp|B7LP19|CBPA_ESCF3 Curved DNA-binding protein OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNRQF 81
>sp|Q3Z3C3|CBPA_SHISS Curved DNA-binding protein OS=Shigella sonnei (strain Ss046)
GN=cbpA PE=3 SV=1
Length = 306
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPDAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD + +N+ N QF
Sbjct: 56 LSDEQRRAEYDQMW---QHRNDPQFNHQF 81
>sp|Q38W94|DNAJ_LACSS Chaperone protein DnaJ OS=Lactobacillus sakei subsp. sakei (strain
23K) GN=dnaJ PE=3 SV=1
Length = 383
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 69 SETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWE 128
+E + +Y VLG+ G +EI K Y LS + P++ + + K VTEA+E
Sbjct: 2 AEKRDYYDVLGV-----GRDASDDEIKKAYRKLSKKYH-PDINKAPDAEAKFKEVTEAYE 55
Query: 129 VLSDARRKEAYD 140
LSD +++ AYD
Sbjct: 56 ALSDPQKRAAYD 67
>sp|Q57QP2|CBPA_SALCH Curved DNA-binding protein OS=Salmonella choleraesuis (strain
SC-B67) GN=cbpA PE=3 SV=1
Length = 306
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129
E K +Y ++G+K ++ I Y L+ + P++ + K V EAWEV
Sbjct: 2 ELKDYYAIMGVKP-----TDDLKTIKTAYRRLARKYH-PDVSKEPNAEARFKEVAEAWEV 55
Query: 130 LSDARRKEAYDLLMGFTNRKNNNVINVQF 158
LSD +R+ YD L +N+ N QF
Sbjct: 56 LSDEQRRAEYDQLW---QHRNDPQFNRQF 81
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5) GN=dnaJ2
PE=3 SV=1
Length = 376
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 67 LASETK-SWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTE 125
+AS TK +Y +LG+ EEI K Y L + P++C E + K + E
Sbjct: 1 MASSTKKDYYEILGVPR-----NASQEEIKKAYRRLVRKYH-PDICKKPECEEKFKEINE 54
Query: 126 AWEVLSDARRKEAYDL 141
A++VLSD +++ YD+
Sbjct: 55 AYQVLSDPEKRKLYDM 70
>sp|Q823T2|DNAJ_CHLCV Chaperone protein DnaJ OS=Chlamydophila caviae (strain GPIC)
GN=dnaJ PE=3 SV=1
Length = 392
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 74 WYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDA 133
+Y VLG+ + EEI K Y L+ + E + K V+EA+EVLSD
Sbjct: 3 YYDVLGVSK-----TASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDP 57
Query: 134 RRKEAYD 140
+++E+YD
Sbjct: 58 QKRESYD 64
>sp|Q5L6F7|DNAJ_CHLAB Chaperone protein DnaJ OS=Chlamydophila abortus (strain S26/3)
GN=dnaJ PE=3 SV=1
Length = 391
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 74 WYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDA 133
+Y VLG+ + EEI K Y L+ + E + K V+EA+EVLSD
Sbjct: 3 YYDVLGVSK-----TASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDP 57
Query: 134 RRKEAYD 140
+++E+YD
Sbjct: 58 QKRESYD 64
>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1
SV=1
Length = 337
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLS 131
K +Y +LG+++G E+I K Y + F P+ + + K V EA+EVLS
Sbjct: 3 KDYYCILGIEKG-----ASDEDIKKAYRKQALKFH-PDKNKSPQAEEKFKEVAEAYEVLS 56
Query: 132 DARRKEAYD 140
D +++E YD
Sbjct: 57 DPKKREIYD 65
>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2
SV=1
Length = 337
Score = 38.1 bits (87), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLS 131
K +Y +LG+++G E+I K Y + F P+ + + K V EA+EVLS
Sbjct: 3 KDYYCILGIEKG-----ASDEDIKKAYRKQALKFH-PDKNKSPQAEEKFKEVAEAYEVLS 56
Query: 132 DARRKEAYD 140
D +++E YD
Sbjct: 57 DPKKREIYD 65
>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1
Length = 337
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLS 131
K +Y +LG+++G E+I K Y + F P+ + + K V EA+EVLS
Sbjct: 3 KDYYCILGIEKG-----ASDEDIKKAYRKQALRFH-PDKNKSPQAEERFKEVAEAYEVLS 56
Query: 132 DARRKEAYD 140
D +++E YD
Sbjct: 57 DPKKREIYD 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,435,710
Number of Sequences: 539616
Number of extensions: 3161345
Number of successful extensions: 10333
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 10139
Number of HSP's gapped (non-prelim): 472
length of query: 207
length of database: 191,569,459
effective HSP length: 112
effective length of query: 95
effective length of database: 131,132,467
effective search space: 12457584365
effective search space used: 12457584365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 58 (26.9 bits)