Query 039157
Match_columns 207
No_of_seqs 277 out of 2112
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 11:19:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.8 4.6E-21 1.6E-25 136.3 8.8 68 72-145 3-70 (77)
2 2ctp_A DNAJ homolog subfamily 99.8 5.2E-21 1.8E-25 136.3 8.7 70 70-145 5-74 (78)
3 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.1E-20 3.6E-25 137.9 7.6 69 70-144 15-83 (88)
4 2dn9_A DNAJ homolog subfamily 99.8 1.3E-20 4.4E-25 134.5 7.8 70 70-145 5-75 (79)
5 2ej7_A HCG3 gene; HCG3 protein 99.8 2.6E-20 8.7E-25 133.8 8.9 68 71-144 8-77 (82)
6 2ctr_A DNAJ homolog subfamily 99.8 2.1E-20 7E-25 136.4 7.3 68 70-143 5-72 (88)
7 2och_A Hypothetical protein DN 99.8 3E-20 1E-24 130.9 7.5 67 70-144 6-72 (73)
8 1wjz_A 1700030A21RIK protein; 99.8 4.6E-20 1.6E-24 135.6 8.2 67 71-143 15-88 (94)
9 2lgw_A DNAJ homolog subfamily 99.8 5.3E-20 1.8E-24 137.4 6.3 67 72-144 2-70 (99)
10 2ctq_A DNAJ homolog subfamily 99.8 8.3E-20 2.8E-24 138.9 7.4 69 71-145 19-88 (112)
11 2dmx_A DNAJ homolog subfamily 99.8 1.3E-19 4.3E-24 133.1 7.8 68 71-144 8-77 (92)
12 2yua_A Williams-beuren syndrom 99.8 9.8E-20 3.3E-24 135.6 7.1 66 71-142 16-82 (99)
13 2ctw_A DNAJ homolog subfamily 99.8 1.8E-19 6.3E-24 136.5 7.6 70 69-144 14-84 (109)
14 2o37_A Protein SIS1; HSP40, J- 99.8 3.2E-19 1.1E-23 131.2 6.4 66 70-143 6-71 (92)
15 1bq0_A DNAJ, HSP40; chaperone, 99.8 1.5E-19 5E-24 135.5 4.4 68 72-145 3-71 (103)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 4E-19 1.4E-23 134.3 5.9 69 70-144 13-86 (109)
17 2ys8_A RAB-related GTP-binding 99.7 1.9E-18 6.5E-23 126.7 5.9 62 70-137 25-86 (90)
18 3apq_A DNAJ homolog subfamily 99.7 3.8E-18 1.3E-22 140.1 6.7 69 72-146 2-71 (210)
19 2l6l_A DNAJ homolog subfamily 99.7 5E-18 1.7E-22 135.5 5.9 67 71-143 9-82 (155)
20 1gh6_A Large T antigen; tumor 99.7 2.6E-18 8.9E-23 131.5 1.8 64 72-144 8-73 (114)
21 3hho_A CO-chaperone protein HS 99.7 2E-17 6.7E-22 135.0 5.5 67 71-143 3-77 (174)
22 2pf4_E Small T antigen; PP2A, 99.7 8.4E-18 2.9E-22 137.4 1.6 64 72-144 11-76 (174)
23 1fpo_A HSC20, chaperone protei 99.7 3.7E-17 1.3E-21 133.0 5.2 65 73-143 2-74 (171)
24 3lz8_A Putative chaperone DNAJ 99.7 6.9E-18 2.4E-22 150.1 0.0 67 71-143 27-93 (329)
25 1n4c_A Auxilin; four helix bun 99.6 3.5E-17 1.2E-21 134.6 1.9 79 53-139 100-182 (182)
26 1iur_A KIAA0730 protein; DNAJ 99.6 6.9E-17 2.4E-21 118.3 3.1 59 72-136 16-76 (88)
27 3bvo_A CO-chaperone protein HS 99.6 2.2E-16 7.7E-21 132.1 5.3 68 71-142 42-115 (207)
28 2qwo_B Putative tyrosine-prote 99.6 9.6E-17 3.3E-21 118.5 1.9 72 53-132 16-91 (92)
29 1faf_A Large T antigen; J doma 99.6 2.6E-16 8.9E-21 112.8 3.8 62 72-140 11-72 (79)
30 3ag7_A Putative uncharacterize 99.6 1.2E-16 4E-21 120.9 1.6 75 51-134 22-104 (106)
31 3uo3_A J-type CO-chaperone JAC 99.6 4.5E-16 1.6E-20 127.8 4.2 66 70-143 9-81 (181)
32 2guz_A Mitochondrial import in 99.6 7.1E-16 2.4E-20 108.3 2.5 55 73-136 15-70 (71)
33 3apo_A DNAJ homolog subfamily 99.5 1.3E-15 4.4E-20 146.6 1.7 70 70-145 19-89 (780)
34 2y4t_A DNAJ homolog subfamily 99.5 1.3E-13 4.5E-18 120.0 10.9 113 12-141 333-449 (450)
35 2guz_B Mitochondrial import in 98.5 7.6E-08 2.6E-12 66.3 4.8 54 73-132 5-58 (65)
36 2pzi_A Probable serine/threoni 95.1 0.03 1E-06 52.8 6.3 50 67-129 624-675 (681)
37 2crb_A Nuclear receptor bindin 70.3 10 0.00036 27.4 5.6 44 1-44 8-51 (97)
38 3qky_A Outer membrane assembly 51.5 81 0.0028 24.3 9.8 94 11-129 151-244 (261)
39 2l6j_A TPR repeat-containing p 40.5 71 0.0024 20.4 9.2 31 9-49 5-35 (111)
40 1orj_A Flagellar protein FLIS; 39.4 48 0.0016 24.8 5.0 90 8-107 29-125 (130)
41 4a3n_A Transcription factor SO 38.9 64 0.0022 20.5 5.1 41 95-140 14-54 (71)
42 4gco_A Protein STI-1; structur 36.5 1E+02 0.0036 21.3 10.2 32 8-49 13-44 (126)
43 1pc2_A Mitochondria fission pr 36.2 68 0.0023 24.7 5.6 49 4-63 67-115 (152)
44 4gco_A Protein STI-1; structur 34.4 1.1E+02 0.0039 21.1 6.6 29 11-49 50-78 (126)
45 4gcn_A Protein STI-1; structur 34.1 1.1E+02 0.0039 21.0 9.2 32 8-49 8-39 (127)
46 3rkv_A Putative peptidylprolyl 33.9 1.2E+02 0.0042 21.3 6.7 29 11-49 66-94 (162)
47 3upv_A Heat shock protein STI1 32.7 1.1E+02 0.0038 20.4 6.4 32 8-49 4-35 (126)
48 3ma5_A Tetratricopeptide repea 32.4 1.1E+02 0.0036 20.1 5.6 31 10-50 9-39 (100)
49 2kat_A Uncharacterized protein 32.2 35 0.0012 22.8 3.1 30 10-49 21-50 (115)
50 1y8m_A FIS1; mitochondria, unk 31.3 1.1E+02 0.0036 23.6 5.8 49 3-62 72-120 (144)
51 3vtx_A MAMA; tetratricopeptide 31.1 45 0.0015 24.0 3.7 30 12-51 9-38 (184)
52 3o48_A Mitochondria fission 1 30.9 1.2E+02 0.004 23.0 6.0 48 3-61 73-120 (134)
53 3upv_A Heat shock protein STI1 30.2 1.2E+02 0.0042 20.1 10.1 28 12-49 42-69 (126)
54 1nzn_A CGI-135 protein, fissio 28.4 1.5E+02 0.005 22.0 6.1 45 4-59 70-114 (126)
55 1i11_A Transcription factor SO 27.7 1.1E+02 0.0037 20.2 4.9 43 95-142 16-58 (81)
56 1hry_A Human SRY; DNA, DNA-bin 26.9 68 0.0023 20.8 3.6 41 95-140 16-56 (76)
57 1hxi_A PEX5, peroxisome target 25.6 68 0.0023 22.1 3.7 31 9-49 18-48 (121)
58 3mkr_A Coatomer subunit epsilo 25.2 2.6E+02 0.009 22.3 8.5 35 91-127 251-288 (291)
59 1na3_A Designed protein CTPR2; 24.3 1.3E+02 0.0043 18.3 4.8 32 8-49 9-40 (91)
60 1wz6_A HMG-box transcription f 24.2 80 0.0027 20.9 3.6 43 95-142 19-61 (82)
61 3f27_D Transcription factor SO 24.0 1E+02 0.0035 20.3 4.2 42 95-141 18-59 (83)
62 4ga2_A E3 SUMO-protein ligase 23.9 1.9E+02 0.0066 20.3 9.5 29 11-49 34-62 (150)
63 1ckt_A High mobility group 1 p 23.9 1.1E+02 0.0039 19.3 4.3 41 98-141 16-56 (71)
64 2dba_A Smooth muscle cell asso 22.8 1.3E+02 0.0044 20.1 4.7 32 8-49 28-59 (148)
65 2e2e_A Formate-dependent nitri 22.8 2.1E+02 0.007 20.2 6.6 18 13-30 120-137 (177)
66 3u2b_C Transcription factor SO 22.8 1.6E+02 0.0055 19.0 5.0 42 95-141 14-55 (79)
67 1k99_A Upstream binding factor 22.1 1.4E+02 0.0048 20.7 4.8 43 95-142 22-64 (99)
68 2rpa_A Katanin P60 ATPase-cont 21.1 1.8E+02 0.0061 19.8 4.9 37 10-46 14-50 (78)
69 2crj_A SWI/SNF-related matrix- 20.9 1.3E+02 0.0045 20.4 4.3 41 96-141 20-60 (92)
70 1hme_A High mobility group pro 20.1 1.7E+02 0.0057 18.9 4.6 40 96-140 19-58 (77)
71 2dba_A Smooth muscle cell asso 20.0 1.9E+02 0.0064 19.2 5.1 31 9-49 66-96 (148)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=4.6e-21 Score=136.32 Aligned_cols=68 Identities=31% Similarity=0.450 Sum_probs=64.9
Q ss_pred CCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhcCc
Q 039157 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMGF 145 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~ 145 (207)
.|||+||||+++ ++.++||++||+|+++ +|||+++...+.+.|+.|++||++|+||.+|..||..+..
T Consensus 3 ~~~y~iLgv~~~-----as~~~Ik~ayr~l~~~-~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~ 70 (77)
T 1hdj_A 3 KDYYQTLGLARG-----ASDEEIKRAYRRQALR-YHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCSHHHHTCCTT-----CCHHHHHHHHHHHHHT-TCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccc
Confidence 589999999999 9999999999999999 9999999888999999999999999999999999998743
No 2
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=5.2e-21 Score=136.35 Aligned_cols=70 Identities=24% Similarity=0.415 Sum_probs=66.0
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhcCc
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMGF 145 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~ 145 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++.+.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 5 ~~~~~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 5 SSGDYYEILGVSRG-----ASDEDLKKAYRRLALK-FHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CSCCHHHHHTCCTT-----CCHHHHHHHHHHHHTT-SCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 34699999999999 9999999999999999 9999999888999999999999999999999999998753
No 3
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=1.1e-20 Score=137.94 Aligned_cols=69 Identities=22% Similarity=0.311 Sum_probs=65.5
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++...+.+.|++|++||++|+||.+|..||..+.
T Consensus 15 ~~~d~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 15 LDFDPYRVLGVSRT-----ASQADIKKAYKKLARE-WHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSCHHHHHTCCTT-----CCHHHHHHHHHHHHHH-SCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCCCHHHHcCcCCC-----CCHHHHHHHHHHHHHH-HCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 34599999999999 9999999999999999 999999988899999999999999999999999999874
No 4
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=1.3e-20 Score=134.46 Aligned_cols=70 Identities=27% Similarity=0.402 Sum_probs=64.6
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhhcCc
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLLMGF 145 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~ 145 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++. +.+.+.|+.|++||++|+||.+|..||..+..
T Consensus 5 ~~~~~y~iLgv~~~-----a~~~~Ik~ayr~l~~~-~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 5 SSGDYYQILGVPRN-----ASQKEIKKAYYQLAKK-YHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CCSCHHHHHTCCTT-----CCHHHHHHHHHHHHHH-TCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 34699999999999 9999999999999999 99999985 45899999999999999999999999998643
No 5
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=2.6e-20 Score=133.81 Aligned_cols=68 Identities=32% Similarity=0.442 Sum_probs=63.6
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCh--hHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFV--EVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
..|||+||||+++ ++.++||++||+|+++ +|||+++.. .+.+.|+.|++||++|+||.+|..||..+.
T Consensus 8 ~~~~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 77 (82)
T 2ej7_A 8 MVDYYEVLDVPRQ-----ASSEAIKKAYRKLALK-WHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS 77 (82)
T ss_dssp SCCHHHHTTCCTT-----CCHHHHHHHHHHHHTT-SCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred CcCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence 4599999999999 9999999999999999 999999875 478899999999999999999999999874
No 6
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.1e-20 Score=136.42 Aligned_cols=68 Identities=28% Similarity=0.483 Sum_probs=64.8
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhc
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLM 143 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~ 143 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++...+.+.|+.|++||++|+||.+|..||..+
T Consensus 5 ~~~~~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~ 72 (88)
T 2ctr_A 5 SSGSYYDILGVPKS-----ASERQIKKAFHKLAMK-YHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLG 72 (88)
T ss_dssp CCCSHHHHHTCCTT-----CCHHHHHHHHHHHHHH-TCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTC
T ss_pred CCCCHHHHcCcCCC-----CCHHHHHHHHHHHHHH-HCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhC
Confidence 34699999999999 9999999999999999 99999998889999999999999999999999999986
No 7
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.81 E-value=3e-20 Score=130.87 Aligned_cols=67 Identities=27% Similarity=0.427 Sum_probs=61.8
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
...|||+||||+++ ++.++||++||+|+++ +|||++++. .+.|+.|++||++|+||.+|..||..|.
T Consensus 6 ~~~~~y~iLgl~~~-----a~~~eIk~ayr~l~~~-~HPD~~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 6 KETGYYDVLGVKPD-----ASDNELKKAYRKMALK-FHPDKNPDG--AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCCHHHHHTCCTT-----CCHHHHHHHHHHHHHH-TCTTTCTTC--HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCcCH--HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 45699999999999 9999999999999999 999999763 6899999999999999999999999864
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=4.6e-20 Score=135.57 Aligned_cols=67 Identities=27% Similarity=0.551 Sum_probs=62.4
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-------hhHHHHHHHHHHHHHHcCChhhHHHHhhhc
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-------VEVKNANKLVTEAWEVLSDARRKEAYDLLM 143 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-------~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~ 143 (207)
..|||+||||+++ ++.++||++||+|+++ +|||+++. ..+.+.|+.|++||++|+||.+|..||...
T Consensus 15 ~~~~y~iLgv~~~-----as~~eIk~aYr~l~~~-~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 15 KKDWYSILGADPS-----ANMSDLKQKYQKLILL-YHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp CSCHHHHTTCCTT-----CCHHHHHHHHHHTTSS-SCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred CCChHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 3599999999999 9999999999999999 99999875 348899999999999999999999999884
No 9
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=5.3e-20 Score=137.43 Aligned_cols=67 Identities=28% Similarity=0.387 Sum_probs=62.8
Q ss_pred CCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCh--hHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFV--EVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
.|||+||||+++ ++.++||++||+|+++ +|||+++.. .+.+.|+.|++||++|+|+.+|..||..+.
T Consensus 2 ~d~Y~iLgv~~~-----as~~eIk~aYr~la~~-~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~ 70 (99)
T 2lgw_A 2 ASYYEILDVPRS-----ASADDIKKAYRRKALQ-WHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR 70 (99)
T ss_dssp CCHHHHSSSCTT-----SCHHHHHHHHHHHHHH-TSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 489999999999 9999999999999999 999999875 388999999999999999999999999863
No 10
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=8.3e-20 Score=138.94 Aligned_cols=69 Identities=22% Similarity=0.302 Sum_probs=64.3
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhhcCc
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLLMGF 145 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~ 145 (207)
..|||+||||+++ ++.++||++||+|+++ +|||+++. ..+.+.|++|++||++|+||.+|..||..+..
T Consensus 19 ~~d~Y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 19 TEDYYTLLGCDEL-----SSVEQILAEFKVRALE-CHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCHHHHTTCCTT-----SCHHHHHHHHHHHHHT-TCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 4699999999999 9999999999999999 99999984 55899999999999999999999999998643
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.3e-19 Score=133.06 Aligned_cols=68 Identities=34% Similarity=0.500 Sum_probs=63.7
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCh--hHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFV--EVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
..|||+||||+++ ++.++||++||+|+++ +|||+++.. .+.+.|++|++||++|+||.+|..||..+.
T Consensus 8 ~~~~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 77 (92)
T 2dmx_A 8 MANYYEVLGVQAS-----ASPEDIKKAYRKLALR-WHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC 77 (92)
T ss_dssp CCCHHHHHTCCTT-----CCTTHHHHHHHHHHHH-TCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred CcCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 4599999999999 9999999999999999 999999875 488999999999999999999999999864
No 12
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=9.8e-20 Score=135.63 Aligned_cols=66 Identities=23% Similarity=0.292 Sum_probs=62.0
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
..|||+||||++. ++.++||++||+|+++ +|||+++. ..+.+.|++|++||++|+|+.+|..||..
T Consensus 16 ~~~~Y~vLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 16 RTALYDLLGVPST-----ATQAQIKAAYYRQCFL-YHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp SSHHHHHHTCCTT-----CCHHHHHHHHHHHHHH-SCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred ccCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 3599999999999 9999999999999999 99999975 45899999999999999999999999986
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=1.8e-19 Score=136.49 Aligned_cols=70 Identities=27% Similarity=0.418 Sum_probs=64.5
Q ss_pred ccCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 69 SETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 69 ~~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
....|||+||||+++ ++.++||++||+|+++ +|||+++. +.+.+.|++|++||++|+|+.+|..||..+.
T Consensus 14 ~~~~~~Y~vLgv~~~-----as~~eIk~aYr~la~~-~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 14 TSGESLYHVLGLDKN-----ATSDDIKKSYRKLALK-YHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp SCSCCHHHHHTCCTT-----CCHHHHHHHHHHHHHH-SCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCCHHHHcCcCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 345699999999999 9999999999999999 99999986 4588999999999999999999999999863
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.2e-19 Score=131.17 Aligned_cols=66 Identities=24% Similarity=0.402 Sum_probs=61.5
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhc
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLM 143 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~ 143 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++.. .+.|++|++||++|+||.+|..||..+
T Consensus 6 ~~~~~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~ 71 (92)
T 2o37_A 6 KETKLYDLLGVSPS-----ANEQELKKGYRKAALK-YHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYG 71 (92)
T ss_dssp SCCHHHHHHTCCTT-----CCHHHHHHHHHHHHHH-HCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHC
T ss_pred cCCCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHC
Confidence 34699999999999 9999999999999999 999999763 679999999999999999999999986
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.77 E-value=1.5e-19 Score=135.48 Aligned_cols=68 Identities=29% Similarity=0.458 Sum_probs=63.7
Q ss_pred CCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhhcCc
Q 039157 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLLMGF 145 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~ 145 (207)
.|||+||||+++ ++.++||++||+|+++ +|||+++. ..+.+.|++|++||++|+||.+|..||..+..
T Consensus 3 ~~~y~iLgv~~~-----as~~eIk~ayr~l~~~-~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 71 (103)
T 1bq0_A 3 QDYYEILGVSKT-----AEEREIRKAYKRLAMK-YHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHA 71 (103)
T ss_dssp CCSTTTTSSCSS-----CCHHHHHHHHHHHHTT-TCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTT
T ss_pred CCHHHHcCcCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhh
Confidence 589999999999 9999999999999999 99999985 45889999999999999999999999998743
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.76 E-value=4e-19 Score=134.28 Aligned_cols=69 Identities=20% Similarity=0.398 Sum_probs=64.2
Q ss_pred cCCCchhhcCcccCCCCCCC-cHHHHHHHHHHHhhccCCCCCCCC----hhHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 70 ETKSWYGVLGLKEGRGGGAT-RVEEINKHYEVLSTLFQQPNMCSF----VEVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~a-s~~eIk~aYrklal~~~HPDk~~~----~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
...|||+||||+++ + +.++||++||+|+++ +|||++++ ..+.+.|+.|++||++|+||.+|..||..+.
T Consensus 13 ~~~~~y~iLgv~~~-----a~s~~eIk~aYr~l~~~-~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNRE-----EFDKQKLAKAYRALARK-HHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGG-----GCCHHHHHHHHHHHHHH-TCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCC-----CCCHHHHHHHHHHHHHH-HCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 45699999999999 9 999999999999999 99999987 4488999999999999999999999999864
No 17
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.9e-18 Score=126.69 Aligned_cols=62 Identities=29% Similarity=0.453 Sum_probs=58.9
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHH
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKE 137 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~ 137 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++...+.++|+.|++||++|+|+.+|+
T Consensus 25 ~~~~~y~iLgv~~~-----as~~eIk~aYr~la~~-~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPG-----ASRDEVNKAYRKLAVL-LHPDKCVAPGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTT-----CCHHHHHHHHHHHHHH-HCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCccHHHHHHHHHHHHHHHCCccccc
Confidence 45799999999999 9999999999999999 99999998889999999999999999999874
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.73 E-value=3.8e-18 Score=140.13 Aligned_cols=69 Identities=20% Similarity=0.332 Sum_probs=63.9
Q ss_pred CCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhhcCcC
Q 039157 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLLMGFT 146 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~~ 146 (207)
.|||+||||+++ ++.++||++||+|+++ +|||+++. ..+.++|+.|++||++|+||.+|+.||..|...
T Consensus 2 ~~~y~~l~~~~~-----a~~~~ik~ay~~l~~~-~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 2 QNFYSLLGVSKT-----ASSREIRQAFKKLALK-LHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp CCHHHHHTCCTT-----CCHHHHHHHHHHHHHH-HCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred CCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 489999999999 9999999999999999 99999964 458999999999999999999999999987543
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.71 E-value=5e-18 Score=135.52 Aligned_cols=67 Identities=24% Similarity=0.517 Sum_probs=62.2
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChh-------HHHHHHHHHHHHHHcCChhhHHHHhhhc
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVE-------VKNANKLVTEAWEVLSDARRKEAYDLLM 143 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~-------a~~~f~~i~~Ay~vLsd~~kR~~YD~~~ 143 (207)
..|||+||||+++ ++.++||++||+|+++ +|||+++... +.+.|+.|++||++|+||.+|+.||..+
T Consensus 9 ~~~~y~iLgv~~~-----a~~~eIk~aYr~l~~~-~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 9 KKDWYSILGADPS-----ANISDLKQKYQKLILM-YHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CSHHHHHHTCCTT-----CCHHHHHHHHHHHHHH-HSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCChhHhcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 4599999999999 9999999999999999 9999998763 5789999999999999999999999874
No 20
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.70 E-value=2.6e-18 Score=131.55 Aligned_cols=64 Identities=14% Similarity=0.119 Sum_probs=59.8
Q ss_pred CCchhhcCcccCCCCCCCcH--HHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 72 KSWYGVLGLKEGRGGGATRV--EEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~--~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
.|||+||||+++ ++. ++||++||+|+++ +|||+++. .++|++|++||++|+||.+|+.||.++.
T Consensus 8 ~~~Y~iLgv~~~-----as~~~~eIk~aYr~la~~-~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 8 LQLMDLLGLERS-----AWGNIPLMRKAYLKKCKE-FHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHTTCCTT-----SCSCHHHHHHHHHHTTTT-CCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhHHHHcCCCCC-----CCcCHHHHHHHHHHHHHH-HCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 489999999999 988 9999999999999 99999887 6899999999999999999999998753
No 21
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.68 E-value=2e-17 Score=135.00 Aligned_cols=67 Identities=15% Similarity=0.310 Sum_probs=61.1
Q ss_pred CCCchhhcCcccCCCCCCCc--HHHHHHHHHHHhhccCCCCCCCChh------HHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 71 TKSWYGVLGLKEGRGGGATR--VEEINKHYEVLSTLFQQPNMCSFVE------VKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as--~~eIk~aYrklal~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
..|||+||||+++ ++ ..+||++||+|+++ +|||++++.. +.+.|+.|++||++|+||.+|..||..
T Consensus 3 ~~d~Y~iLgl~~~-----a~id~~eIk~aYr~l~~~-~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQ-----FELDGSLLSSQFRALQKR-FHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSS-----SCCCHHHHHHHHHHHHHH-HCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCC-----CCCCHHHHHHHHHHHHHH-HCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 4699999999998 77 99999999999999 9999998764 668899999999999999999999986
Q ss_pred c
Q 039157 143 M 143 (207)
Q Consensus 143 ~ 143 (207)
.
T Consensus 77 l 77 (174)
T 3hho_A 77 L 77 (174)
T ss_dssp H
T ss_pred c
Confidence 4
No 22
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=8.4e-18 Score=137.38 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=57.5
Q ss_pred CCchhhcCcccCCCCCCCc--HHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhcC
Q 039157 72 KSWYGVLGLKEGRGGGATR--VEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLMG 144 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as--~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~ 144 (207)
.|||+||||+++ ++ .++||++||+++++ +|||++++ +++|++|++||++|+||.+|+.||+.|.
T Consensus 11 ~d~Y~vLGl~~~-----as~~~~eIKkAYRkLa~~-~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERS-----AWGNIPLMRKAYLKKCKE-FHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGG-----GTTCHHHHHHHHHHHGGG-CSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCC-----CCcCHHHHHHHHHHHHHH-HCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 489999999999 88 59999999999999 99999877 5899999999999999999999999985
No 23
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.66 E-value=3.7e-17 Score=133.05 Aligned_cols=65 Identities=14% Similarity=0.336 Sum_probs=60.4
Q ss_pred CchhhcCcccCCCCCCC--cHHHHHHHHHHHhhccCCCCCCCChh------HHHHHHHHHHHHHHcCChhhHHHHhhhc
Q 039157 73 SWYGVLGLKEGRGGGAT--RVEEINKHYEVLSTLFQQPNMCSFVE------VKNANKLVTEAWEVLSDARRKEAYDLLM 143 (207)
Q Consensus 73 d~Y~vLgv~~~~~~~~a--s~~eIk~aYrklal~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsd~~kR~~YD~~~ 143 (207)
|||+||||+++ + +..+||++||+|+++ ||||++++.. +.+.|+.|++||++|+||.+|..||...
T Consensus 2 d~y~lLgl~~~-----a~i~~~eIk~aYr~L~~~-~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPAR-----YQLDTQALSLRFQDLQRQ-YHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSS-----SCCCHHHHHHHHHHHHHH-TCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCC-----CCCCHHHHHHHHHHHHHH-hCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 79999999999 8 999999999999999 9999998753 4578999999999999999999999874
No 24
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.66 E-value=6.9e-18 Score=150.09 Aligned_cols=67 Identities=30% Similarity=0.555 Sum_probs=0.0
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhhc
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLLM 143 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~ 143 (207)
.+|||+||||+++ |+.++||+|||+|+++ ||||+++...++++|++|++||++|+||.+|+.||+++
T Consensus 27 ~~d~Y~vLgv~~~-----as~~eIk~aYr~la~~-~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 27 LKDYYAILGVQPT-----DDLKTIKTAYRRLARK-YHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCC-----CCHHHHHHHHHHHHHH-HCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 3699999999999 9999999999999999 99999998889999999999999999999999999973
No 25
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.64 E-value=3.5e-17 Score=134.57 Aligned_cols=79 Identities=13% Similarity=0.199 Sum_probs=66.0
Q ss_pred CCHHHHHHHHHHHHHhccCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChh----HHHHHHHHHHHHH
Q 039157 53 PGFGRYTASYLVHRLASETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVE----VKNANKLVTEAWE 128 (207)
Q Consensus 53 ~~~~~~~~~~~v~~~a~~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~----a~~~f~~i~~Ay~ 128 (207)
..+..++..+.. +.....|||+||||++. ++.++||++||+++++ +||||+++.. +.+.|+.|++||+
T Consensus 100 ~niRaLLssl~~--vl~~~~d~Y~vLgv~~~-----As~~eIKkAYRklal~-~HPDK~~~~~~e~~A~~~F~~I~eAYe 171 (182)
T 1n4c_A 100 RNIRALLSTMHT--VLWAGETKWKPVGMADL-----VTPEQVKKVYRKAVLV-VHPDKATGQPYEQYAKMIFMELNDAWS 171 (182)
T ss_dssp TCHHHHHHHGGG--GSCTTCCCCCCCCGGGG-----SSHHHHHHHHHHHHHH-TCGGGGSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HhcCccchhhcCCCCCC-----CCHHHHHHHHHHHHHH-HCcCcCCCcchHHHHHHHHHHHHHHHH
Confidence 455555554432 22334699999999999 9999999999999999 9999998765 7889999999999
Q ss_pred HcCChhhHHHH
Q 039157 129 VLSDARRKEAY 139 (207)
Q Consensus 129 vLsd~~kR~~Y 139 (207)
+|+|+.+|+.|
T Consensus 172 vLsD~~kR~~Y 182 (182)
T 1n4c_A 172 EFENQGQKPLY 182 (182)
T ss_dssp HHHHHHSSCCC
T ss_pred HHCCHHhhhhC
Confidence 99999999766
No 26
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.63 E-value=6.9e-17 Score=118.28 Aligned_cols=59 Identities=14% Similarity=-0.071 Sum_probs=54.8
Q ss_pred CCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCh--hHHHHHHHHHHHHHHcCChhhH
Q 039157 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFV--EVKNANKLVTEAWEVLSDARRK 136 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~--~a~~~f~~i~~Ay~vLsd~~kR 136 (207)
.|+|+||||+++ ++.++||++||+|+++ ||||+++.. .+.+.|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~-----as~~eIKkaYrkla~~-~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWK-----LPESERKKIIRRLYLK-WHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTS-----SCSHHHHHHHHHHHHH-TCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCC-----CCHHHHHHHHHHHHHH-HCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 389999999999 9999999999999999 999999885 3889999999999999998666
No 27
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.62 E-value=2.2e-16 Score=132.13 Aligned_cols=68 Identities=18% Similarity=0.342 Sum_probs=60.1
Q ss_pred CCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChh------HHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 71 TKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVE------VKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 71 ~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~------a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
..|||+||||++. +.++..+||++||+|+++ +|||++++.. +.+.|+.|++||+||+||.+|..||..
T Consensus 42 ~~d~y~lLgv~~~---~~a~~~eIk~aYr~L~~~-~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 42 TRDYFSLMDCNRS---FRVDTAKLQHRYQQLQRL-VHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp TCCHHHHTTSCSC---SCCCHHHHHHHHHHHHHH-HCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCCCCC---CCCCHHHHHHHHHHHHHH-HCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 4599999999975 226899999999999999 9999998643 567899999999999999999999965
No 28
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.61 E-value=9.6e-17 Score=118.52 Aligned_cols=72 Identities=13% Similarity=0.162 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHHHHhccCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChh----HHHHHHHHHHHHH
Q 039157 53 PGFGRYTASYLVHRLASETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVE----VKNANKLVTEAWE 128 (207)
Q Consensus 53 ~~~~~~~~~~~v~~~a~~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~----a~~~f~~i~~Ay~ 128 (207)
..+..++..+... + ....++|++|||++. ++.++||++||+++++ +||||+++.. ++++|+.|++||+
T Consensus 16 ~~ir~lL~~l~~~-L-~~~~~~y~~Lgv~~~-----as~~eIKkAYRklal~-~HPDK~~~~~~~~~A~~~F~~i~eAye 87 (92)
T 2qwo_B 16 RNIRALLSTMHTV-L-WAGETKWKPVGMADL-----VTPEQVKKVYRKAVLV-VHPCKATGQPYEQYAKMIFMELNDAWS 87 (92)
T ss_dssp TCHHHHHHHGGGT-S-CTTCCSCCCCCGGGS-----SSHHHHHHHHHHHHHH-TCHHHHTTSTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-h-cccccCCeecCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCchhHhHHHHHHHHHHHHHH
Confidence 3566666665543 2 222589999999999 9999999999999999 9999998753 7889999999999
Q ss_pred HcCC
Q 039157 129 VLSD 132 (207)
Q Consensus 129 vLsd 132 (207)
+|.+
T Consensus 88 vL~~ 91 (92)
T 2qwo_B 88 EFEN 91 (92)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9974
No 29
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.61 E-value=2.6e-16 Score=112.80 Aligned_cols=62 Identities=11% Similarity=0.129 Sum_probs=55.3
Q ss_pred CCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHh
Q 039157 72 KSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYD 140 (207)
Q Consensus 72 ~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD 140 (207)
.++|+||||+++ +.++.++||++||+|+++ +|||++++ .+.|+.|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~---~~a~~~eIk~aYr~la~~-~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQ---LWGDFGRMQQAYKQQSLL-LHPDKGGS---HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSS---STTCHHHHHHHHHHHHHH-SSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCC---CCCCHHHHHHHHHHHHHH-HCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 389999999876 347899999999999999 99999865 789999999999999999998743
No 30
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.60 E-value=1.2e-16 Score=120.86 Aligned_cols=75 Identities=12% Similarity=0.151 Sum_probs=62.2
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCh--------hHHHHHHH
Q 039157 51 DIPGFGRYTASYLVHRLASETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFV--------EVKNANKL 122 (207)
Q Consensus 51 ~~~~~~~~~~~~~v~~~a~~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~--------~a~~~f~~ 122 (207)
....+..++..++.. .....|||.|||++ . ++.++||++||+++++ +||||++.. .++++|+.
T Consensus 22 ~~~~ir~lL~~l~~~--l~~~~d~Y~vl~~~-~-----As~~eIKkAYRklal~-~HPDK~~~~~~~~e~~~~A~~~F~~ 92 (106)
T 3ag7_A 22 KSGNIRSLLSTLQYI--LWSGSGWKPVPLMD-M-----IEGNAVRKSYQRALLI-LHPDKLQQKGASANQKYMAEKVFEL 92 (106)
T ss_dssp TTTCHHHHHTTGGGT--SCTTSCCCCCCGGG-S-----CSHHHHHHHHHHHHHH-HCHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH--hcccCCHHHHcCCC-C-----CCHHHHHHHHHHHHHH-HCcCcCCCcccchhhHHHHHHHHHH
Confidence 334688887776653 34457999999997 7 8999999999999999 999998742 26889999
Q ss_pred HHHHHHHcCChh
Q 039157 123 VTEAWEVLSDAR 134 (207)
Q Consensus 123 i~~Ay~vLsd~~ 134 (207)
|++||++|+|+.
T Consensus 93 I~~AYevLsd~~ 104 (106)
T 3ag7_A 93 LQEAWDHFNTLG 104 (106)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHHHcCcc
Confidence 999999999975
No 31
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=4.5e-16 Score=127.79 Aligned_cols=66 Identities=21% Similarity=0.374 Sum_probs=59.5
Q ss_pred cCCCchhhcC------ccc-CCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 70 ETKSWYGVLG------LKE-GRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 70 ~~~d~Y~vLg------v~~-~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
...|||+||| +++ + ++..+||++||+|+++ +|||++++ +.+.|+.|++||++|+||.+|..||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~-----a~~~eIk~aYr~la~~-~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWT-----IDQSRLRKEYRQLQAQ-HHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSC-----CCHHHHHHHHHHHHHT-CCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCC-----CCHHHHHHHHHHHHHH-hCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 3469999994 554 6 9999999999999999 99999987 788899999999999999999999986
Q ss_pred c
Q 039157 143 M 143 (207)
Q Consensus 143 ~ 143 (207)
.
T Consensus 81 l 81 (181)
T 3uo3_A 81 L 81 (181)
T ss_dssp H
T ss_pred H
Confidence 4
No 32
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=7.1e-16 Score=108.28 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=50.6
Q ss_pred CchhhcCccc-CCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhH
Q 039157 73 SWYGVLGLKE-GRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRK 136 (207)
Q Consensus 73 d~Y~vLgv~~-~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR 136 (207)
++|+||||++ + ++.++||++||+|+++ +|||++.+ .+.|++|++||++|+|+..|
T Consensus 15 ~~y~iLgl~~~~-----a~~~eIk~ayr~l~~~-~HPDk~g~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 15 EALQILNLTENT-----LTKKKLKEVHRKIMLA-NHPDKGGS---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHTTCCTTT-----CCHHHHHHHHHHHHHH-HCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCCCCC-----CCHHHHHHHHHHHHHH-HCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence 8999999998 8 9999999999999999 99999754 67999999999999987655
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.53 E-value=1.3e-15 Score=146.62 Aligned_cols=70 Identities=20% Similarity=0.334 Sum_probs=40.7
Q ss_pred cCCCchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-hhHHHHHHHHHHHHHHcCChhhHHHHhhhcCc
Q 039157 70 ETKSWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSF-VEVKNANKLVTEAWEVLSDARRKEAYDLLMGF 145 (207)
Q Consensus 70 ~~~d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~-~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~~~~ 145 (207)
...|||+||||+++ ++.++||++||+|+++ +|||+++. ..+.++|++|++||++|+||.+|+.||+.|..
T Consensus 19 ~~~~~y~~lg~~~~-----a~~~~i~~ay~~l~~~-~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~ 89 (780)
T 3apo_A 19 HDQNFYSLLGVSKT-----ASSREIRQAFKKLALK-LHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEK 89 (780)
T ss_dssp ----CHHHHTCCTT-----CCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC---
T ss_pred CCCCHHHHcCCCCC-----CCHHHHHHHHHHHHHH-HCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccc
Confidence 44699999999999 9999999999999999 99999964 45889999999999999999999999998743
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.49 E-value=1.3e-13 Score=120.04 Aligned_cols=113 Identities=21% Similarity=0.247 Sum_probs=82.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhccCCCchhhcCcccCCCCCCCcH
Q 039157 12 DGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTASYLVHRLASETKSWYGVLGLKEGRGGGATRV 91 (207)
Q Consensus 12 ~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~~~~~~~v~~~a~~~~d~Y~vLgv~~~~~~~~as~ 91 (207)
..++.-++..|+++.|... +.++..++| ....+...+.......-.....++|.+||+... ++.
T Consensus 333 ~~l~~~~~~~~~~~~A~~~----------~~~al~~~p-~~~~~~~~l~~~~~~~~~~~~~~~y~~lg~~~~-----~~~ 396 (450)
T 2y4t_A 333 KDRAEAYLIEEMYDEAIQD----------YETAQEHNE-NDQQIREGLEKAQRLLKQSQKRDYYKILGVKRN-----AKK 396 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHH----------HHHHHTTSS-SCHHHHHHHHHHHHHHHHHHSCCSGGGSCSSTT-----CCT
T ss_pred HHHHHHHHHhcCHHHHHHH----------HHHHHHhCc-chHHHHHHHHHHHHHhhcccchhHHHHhCCCcc-----CCH
Confidence 3555666667777777776 777777888 333333333332222123345699999999999 999
Q ss_pred HHHHHHHHHHhhccCCCCCCCChh----HHHHHHHHHHHHHHcCChhhHHHHhh
Q 039157 92 EEINKHYEVLSTLFQQPNMCSFVE----VKNANKLVTEAWEVLSDARRKEAYDL 141 (207)
Q Consensus 92 ~eIk~aYrklal~~~HPDk~~~~~----a~~~f~~i~~Ay~vLsd~~kR~~YD~ 141 (207)
++|+++|+++++. +|||+.+.+. +.+.|+.|.+||++|+|+++|..||.
T Consensus 397 ~~~~~~y~~~~l~-~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 397 QEIIKAYRKLALQ-WHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp THHHHHHHHHHHH-SCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred HHHHHHHHHHHHH-hCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 9999999999999 9999998864 88899999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.54 E-value=7.6e-08 Score=66.34 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=45.2
Q ss_pred CchhhcCcccCCCCCCCcHHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCC
Q 039157 73 SWYGVLGLKEGRGGGATRVEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSD 132 (207)
Q Consensus 73 d~Y~vLgv~~~~~~~~as~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd 132 (207)
+-|.||||++... .++.++|+++||+|... .|||+..+ .-....|++|+++|..
T Consensus 5 EA~~ILgv~~~~~--~a~~~~Ik~~yr~Lm~~-nhPDkGGS---~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKG--DLNMDKINNRFNYLFEV-NDKEKGGS---FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGT--CCSHHHHHHHHHHHHHH-TCGGGTCC---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcC--cCCHHHHHHHHHHHHHH-hCCCCCCC---HHHHHHHHHHHHHHHH
Confidence 3589999986511 26899999999999999 99999766 6778889999999864
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=95.11 E-value=0.03 Score=52.76 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=39.4
Q ss_pred HhccCCCchhhcCcccCCCCCCCcH--HHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHH
Q 039157 67 LASETKSWYGVLGLKEGRGGGATRV--EEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129 (207)
Q Consensus 67 ~a~~~~d~Y~vLgv~~~~~~~~as~--~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~v 129 (207)
+.+..+|||.|||++.. ... .+|+++||+++++ .+++ .+.+.+|..|..|
T Consensus 624 ~~~~~~~~~~~lG~~~~-----~~~lr~~~~~ayr~la~~-~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 624 LKDNKASTNHILGFPFT-----SHGLRLGVEASLRSLARV-APTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HTSCCCSSSEETTEESS-----HHHHHHHHHHHHHHHHHH-CSSH-------HHHHHHHHHHHHH
T ss_pred HHccCCCCcccCCCCCC-----hHHHHHHHHHHHHHHHHh-CCCh-------HHHHHHHHHhccc
Confidence 45566789999999766 444 6799999999999 4443 5789999999876
No 37
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=70.34 E-value=10 Score=27.39 Aligned_cols=44 Identities=20% Similarity=0.186 Sum_probs=37.0
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHH
Q 039157 1 MASPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKN 44 (207)
Q Consensus 1 ~~~~~~~~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a 44 (207)
|-+||-.+---.-.||.++..|.|+.|..+.+.-...|.++.+.
T Consensus 8 ~~spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkl 51 (97)
T 2crb_A 8 MEGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKL 51 (97)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccchhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45778777777788999999999999999989888898886654
No 38
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=51.51 E-value=81 Score=24.28 Aligned_cols=94 Identities=20% Similarity=0.121 Sum_probs=50.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHhccCCCchhhcCcccCCCCCCCc
Q 039157 11 ADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTASYLVHRLASETKSWYGVLGLKEGRGGGATR 90 (207)
Q Consensus 11 ~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~~~~~~~v~~~a~~~~d~Y~vLgv~~~~~~~~as 90 (207)
...++.-++..|+++.|... +.++...+| ..+.......... ..|.-||.........-.
T Consensus 151 ~~~la~~~~~~g~~~~A~~~----------~~~~l~~~p-~~~~~~~a~~~l~---------~~~~~~g~~~~~~~~~~~ 210 (261)
T 3qky_A 151 QYEAARLYERRELYEAAAVT----------YEAVFDAYP-DTPWADDALVGAM---------RAYIAYAEQSVRARQPER 210 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT-TSTTHHHHHHHHH---------HHHHHHHHTSCGGGHHHH
T ss_pred HHHHHHHHHHccCHHHHHHH----------HHHHHHHCC-CCchHHHHHHHHH---------HHHHHhcccchhhcccch
Confidence 36778899999999999999 777777888 3222222221111 124444433110000012
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHH
Q 039157 91 VEEINKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEV 129 (207)
Q Consensus 91 ~~eIk~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~v 129 (207)
.++-...|+++... +|+.. .+..+...+.+.+.-
T Consensus 211 ~~~A~~~~~~~~~~--~p~~~---~~~~a~~~l~~~~~~ 244 (261)
T 3qky_A 211 YRRAVELYERLLQI--FPDSP---LLRTAEELYTRARQR 244 (261)
T ss_dssp HHHHHHHHHHHHHH--CTTCT---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--CCCCh---HHHHHHHHHHHHHHH
Confidence 45566777776666 78643 234444445444433
No 39
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=40.49 E-value=71 Score=20.45 Aligned_cols=31 Identities=3% Similarity=-0.016 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 9 DAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 9 ~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
+....++..++..|+++.|... +.++..++|
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~----------~~~al~~~p 35 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHC----------YDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHH----------HHHHHhcCC
Confidence 4567888999999999999999 788888888
No 40
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=39.42 E-value=48 Score=24.84 Aligned_cols=90 Identities=10% Similarity=0.091 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhcCCH-HHH---HHHHHHHHHhHHHHHHHhhcCCCCCCCHHH-HHHHHH--HHHHhccCCCchhhcCc
Q 039157 8 KDAADGIAKEYLIDKDT-EAC---RDTLRAIVAVLHDTNKNKNLNPNDIPGFGR-YTASYL--VHRLASETKSWYGVLGL 80 (207)
Q Consensus 8 ~~~~~~~a~~~~~~~d~-~~a---~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~-~~~~~~--v~~~a~~~~d~Y~vLgv 80 (207)
..+....|...+..||+ +.. ...+.+..+++..+.. .|+...-..+.. +...|+ ..++|.-.+|-=.+=.|
T Consensus 29 ai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~--sLd~e~GgeiA~nL~~LY~y~~~~LAn~~~d~~~l~ev 106 (130)
T 1orj_A 29 AIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKS--FLDHEKGKEIAKNLDTIYTIILNTLVKVDKTKEELQKI 106 (130)
T ss_dssp HHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHH--TCCTTTSHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH--hcCCccCcHHHHHHHHHHHHHHHHHhcccCCHHHHHHH
Confidence 34566888999999999 888 6777777777765444 445521112333 333332 22232222332222222
Q ss_pred ccCCCCCCCcHHHHHHHHHHHhhccCC
Q 039157 81 KEGRGGGATRVEEINKHYEVLSTLFQQ 107 (207)
Q Consensus 81 ~~~~~~~~as~~eIk~aYrklal~~~H 107 (207)
-.- ..+|+.+|+..... +|
T Consensus 107 ~~l-------l~~lreaW~~i~~~-~~ 125 (130)
T 1orj_A 107 LEI-------LKDLREAWEEVKKK-VH 125 (130)
T ss_dssp HHH-------HHHHHHHHHHHHHH-HH
T ss_pred HHH-------HHHHHHHHHHHHHh-hc
Confidence 222 56777788777777 44
No 41
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=38.90 E-value=64 Score=20.54 Aligned_cols=41 Identities=17% Similarity=0.324 Sum_probs=30.5
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYD 140 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD 140 (207)
.+.+|...+. -||+.. ..+..+.|.+.|..|++.++....+
T Consensus 14 ~~~~r~~~~~-~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQ-QNPDLH----NAELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHT-TCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHH-HCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4556666777 788765 4688899999999999777665444
No 42
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=36.48 E-value=1e+02 Score=21.27 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 8 KDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 8 ~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
++...+....++..|+++.|..+ ..++..++|
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~----------~~~al~~~p 44 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRH----------YNEAVKRDP 44 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHH----------HHHHHHhCC
Confidence 56677888999999999999999 888888999
No 43
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=36.25 E-value=68 Score=24.65 Aligned_cols=49 Identities=10% Similarity=-0.144 Sum_probs=37.0
Q ss_pred ChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCCCCCHHHHHHHHH
Q 039157 4 PLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTASYL 63 (207)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~~~~~~~ 63 (207)
|..-++..+-+|.-++..|||+.|+++ ..+.....| ...++..+...+.
T Consensus 67 p~~~rd~lY~LAv~~~kl~~Y~~A~~y----------~~~lL~ieP-~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 67 KEEQRDYVFYLAVGNYRLKEYEKALKY----------VRGLLQTEP-QNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHH----------HHHHHHHCT-TCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHccCHHHHHHH----------HHHHHhcCC-CCHHHHHHHHHHH
Confidence 444567778899999999999999999 788888899 5445555544443
No 44
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=34.38 E-value=1.1e+02 Score=21.06 Aligned_cols=29 Identities=10% Similarity=-0.044 Sum_probs=24.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 11 ADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 11 ~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
...++.-++..|+++.|... +.++..++|
T Consensus 50 ~~~~~~~~~~~~~~~~A~~~----------~~~al~~~p 78 (126)
T 4gco_A 50 YSNRAACLTKLMEFQRALDD----------CDTCIRLDS 78 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHhhHHHhhccHHHHHHH----------HHHHHHhhh
Confidence 44678888899999999888 888888999
No 45
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=34.13 E-value=1.1e+02 Score=20.99 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 8 KDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 8 ~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
+...+++...++..|+|+.|..+ ..++..++|
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~----------y~~Al~~~p 39 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVH----------YDKAIELDP 39 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHH----------HHHHHHhCC
Confidence 44556788899999999999999 888889999
No 46
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=33.87 E-value=1.2e+02 Score=21.30 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=24.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 11 ADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 11 ~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
...++.-++..|+++.|... +.++..++|
T Consensus 66 ~~nla~~~~~~~~~~~A~~~----------~~~al~~~p 94 (162)
T 3rkv_A 66 YANMSQCYLNIGDLHEAEET----------SSEVLKREE 94 (162)
T ss_dssp HHHHHHHHHHHTCHHHHHHH----------HHHHHHHST
T ss_pred HHHHHHHHHhcCcHHHHHHH----------HHHHHhcCC
Confidence 34678888899999999888 888888899
No 47
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=32.73 E-value=1.1e+02 Score=20.38 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 8 KDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 8 ~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
.+.....+..++..|+++.|..+ +.++..++|
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~----------~~~al~~~p 35 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKA----------YTEMIKRAP 35 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHH----------HHHHHHhCC
Confidence 45667888999999999999999 777888888
No 48
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=32.44 E-value=1.1e+02 Score=20.09 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 039157 10 AADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPN 50 (207)
Q Consensus 10 ~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~ 50 (207)
....++.-++..|+++.|..+ +.++..++|.
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~----------~~~al~~~p~ 39 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALAL----------FEELVETDPD 39 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHH----------HHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHH----------HHHHHHhCCC
Confidence 456788889999999999999 7888888993
No 49
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=32.22 E-value=35 Score=22.76 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 10 AADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 10 ~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
....++.-++..|+++.|..+ +.++..++|
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~----------~~~al~~~p 50 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPH----------LRAALDFDP 50 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHHccCHHHHHHH----------HHHHHHHCC
Confidence 445788889999999999999 777778888
No 50
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=31.27 E-value=1.1e+02 Score=23.56 Aligned_cols=49 Identities=2% Similarity=-0.094 Sum_probs=36.6
Q ss_pred CChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCCCCCHHHHHHHH
Q 039157 3 SPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTASY 62 (207)
Q Consensus 3 ~~~~~~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~~~~~~ 62 (207)
+|..-|+-..-+|.-++..|||+.|+++ .....+..| ...++..+....
T Consensus 72 ~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y----------~d~lL~~eP-~n~QA~~Lk~~I 120 (144)
T 1y8m_A 72 AESRRRECLYYLTIGCYKLGEYSMAKRY----------VDTLFEHER-NNKQVGALKSMV 120 (144)
T ss_dssp CCSTHHHHHHHHHHHHHTTTCHHHHHHH----------HHHHHHTCC-CCHHHHHHHHHH
T ss_pred CccchhHHHHHHHHHHHHhhhHHHHHHH----------HHHHHhcCC-CcHHHHHHHHHH
Confidence 3555677788999999999999999999 777778888 444444444443
No 51
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=31.11 E-value=45 Score=24.01 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCC
Q 039157 12 DGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPND 51 (207)
Q Consensus 12 ~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~ 51 (207)
..++.-++..|+++.|..+ ..++..++|+.
T Consensus 9 ~~lG~~~~~~g~~~~A~~~----------~~~al~~~p~~ 38 (184)
T 3vtx_A 9 MDIGDKKRTKGDFDGAIRA----------YKKVLKADPNN 38 (184)
T ss_dssp HHHHHHHHHHTCHHHHHHH----------HHHHHHHCTTC
T ss_pred HHHHHHHHHcCCHHHHHHH----------HHHHHHhCCCC
Confidence 4678889999999999999 77788888843
No 52
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=30.94 E-value=1.2e+02 Score=23.02 Aligned_cols=48 Identities=2% Similarity=-0.089 Sum_probs=35.9
Q ss_pred CChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCCCCCHHHHHHH
Q 039157 3 SPLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYTAS 61 (207)
Q Consensus 3 ~~~~~~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~~~~~ 61 (207)
+|..-|+-..-+|.-+...|||+.|+++ ........| ...++..+...
T Consensus 73 ~~~~~Rd~LYyLAvg~yklgdY~~Ar~y----------~d~lL~~eP-~N~QA~~Lk~~ 120 (134)
T 3o48_A 73 AESRRRECLYYLTIGCYKLGEYSMAKRY----------VDTLFEHER-NNKQVGALKSM 120 (134)
T ss_dssp CGGGHHHHHHHHHHHHHHHTCHHHHHHH----------HHHHHTTCT-TCHHHHHHHHH
T ss_pred CcchhHHHHHHHHHHHHHhhhHHHHHHH----------HHHHHhhCC-CCHHHHHHHHH
Confidence 3555677888999999999999999999 777778888 44444444333
No 53
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=30.23 E-value=1.2e+02 Score=20.13 Aligned_cols=28 Identities=14% Similarity=0.004 Sum_probs=23.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 12 DGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 12 ~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
..++.-++..|+++.|... +.++..++|
T Consensus 42 ~~~a~~~~~~~~~~~A~~~----------~~~al~~~p 69 (126)
T 3upv_A 42 SNRAAALAKLMSFPEAIAD----------CNKAIEKDP 69 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHhcCHHHHHHH----------HHHHHHhCC
Confidence 3567778888999999888 788888888
No 54
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=28.44 E-value=1.5e+02 Score=22.05 Aligned_cols=45 Identities=11% Similarity=-0.102 Sum_probs=33.2
Q ss_pred ChhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCCCCCCCHHHHH
Q 039157 4 PLAYKDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNPNDIPGFGRYT 59 (207)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p~~~~~~~~~~ 59 (207)
|..-++...-+|.-++..|||+.|+++ ........| ...++..+.
T Consensus 70 p~~~Rd~lY~LAvg~yklg~Y~~A~~~----------~~~lL~~eP-~n~QA~~Lk 114 (126)
T 1nzn_A 70 KEEQRDYVFYLAVGNYRLKEYEKALKY----------VRGLLQTEP-QNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT-TCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHHHH----------HHHHHHhCC-CCHHHHHHH
Confidence 555677778999999999999999999 566666777 333444333
No 55
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=27.72 E-value=1.1e+02 Score=20.18 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=31.6
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
.+.+|...+. -||+.. ..+..+.|.+.|..|++.++...++..
T Consensus 16 ~~~~r~~~~~-~~p~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~A 58 (81)
T 1i11_A 16 AKDERRKILQ-AFPDMH----NSNISKILGSRWKAMTNLEKQPYYEEQ 58 (81)
T ss_dssp HHHHHHHHHT-TCSSCC----HHHHHHHHHHHHTTSCSGGGHHHHHHH
T ss_pred HHHHHHHHHH-HCCCCC----HHHHHHHHHhhhhhCCHHHHHHHHHHH
Confidence 3455666666 788754 467889999999999988877665543
No 56
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=26.88 E-value=68 Score=20.85 Aligned_cols=41 Identities=17% Similarity=0.375 Sum_probs=28.3
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYD 140 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD 140 (207)
.+.+|...+. -||+... .+..+.|.+.|..|++.++....+
T Consensus 16 ~~~~r~~~~~-~~p~~~~----~eisk~lg~~Wk~ls~~eK~~y~~ 56 (76)
T 1hry_A 16 SRDQRRKMAL-ENPRMRN----SEISKQLGYQWKMLTEAEKWPFFQ 56 (76)
T ss_dssp HHHHHHHHHH-HCSCCSS----SHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHH-HCcCCCH----HHHHHHHHhHHHhCCHHHHHHHHH
Confidence 3445555566 6888653 367789999999998776655444
No 57
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=25.63 E-value=68 Score=22.06 Aligned_cols=31 Identities=6% Similarity=-0.106 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 9 DAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 9 ~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
......+..++..|+++.|... +.++..++|
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~----------~~~al~~~P 48 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALA----------FEAVCQKEP 48 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHH----------HHHHHHHST
T ss_pred hhHHHHHHHHHHcCCHHHHHHH----------HHHHHHHCC
Confidence 4566788899999999999999 788888899
No 58
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=25.16 E-value=2.6e+02 Score=22.30 Aligned_cols=35 Identities=14% Similarity=0.004 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCCChh---HHHHHHHHHHHH
Q 039157 91 VEEINKHYEVLSTLFQQPNMCSFVE---VKNANKLVTEAW 127 (207)
Q Consensus 91 ~~eIk~aYrklal~~~HPDk~~~~~---a~~~f~~i~~Ay 127 (207)
.+++.+-++++ +. .+|+...-.. ....|..+...|
T Consensus 251 ~eaa~~~~~~~-~~-~~P~~~~~~d~~~~~~~fd~~~~~~ 288 (291)
T 3mkr_A 251 PEVTNRYLSQL-KD-AHRSHPFIKEYRAKENDFDRLVLQY 288 (291)
T ss_dssp HHHHHHHHHHH-HH-HCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HH-hCCCChHHHHHHHHHHHHHHHHHHc
Confidence 34455555554 44 5887533222 344455554444
No 59
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=24.28 E-value=1.3e+02 Score=18.33 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 8 KDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 8 ~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
.+.+..++..++..|+++.|..+ ..++..++|
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~----------~~~a~~~~~ 40 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEY----------YQKALELDP 40 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHHHHccCHHHHHHH----------HHHHHhcCC
Confidence 34566788999999999999999 777777888
No 60
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=24.16 E-value=80 Score=20.90 Aligned_cols=43 Identities=21% Similarity=0.421 Sum_probs=29.9
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
.+.+|...+. -||+... .+..+.|.+.|..|++.++....+..
T Consensus 19 ~~~~r~~~~~-~~p~~~~----~eisk~lg~~Wk~ls~~eK~~y~~~A 61 (82)
T 1wz6_A 19 CKRHRSLVRQ-EHPRLDN----RGATKILADWWAVLDPKEKQKYTDMA 61 (82)
T ss_dssp HHHHHHHHHH-HCSSSCT----THHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HCCCCCH----HHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 3455666666 6888643 47788999999999977665554443
No 61
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=24.00 E-value=1e+02 Score=20.27 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=30.4
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDL 141 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~ 141 (207)
.+.+|...+. -||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 18 ~~~~r~~~~~-~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (83)
T 3f27_D 18 AKDERKRLAQ-QNPDLH----NAELSKMLGKSWKALTLAEKRPFVEE 59 (83)
T ss_dssp HHHHHHHHHH-HCSSSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHH-HCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4455666666 688764 46888999999999997776654443
No 62
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=23.91 E-value=1.9e+02 Score=20.33 Aligned_cols=29 Identities=17% Similarity=0.093 Sum_probs=25.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 11 ADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 11 ~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
...+|.-|+..|+++.|..+ +.++..++|
T Consensus 34 ~~~la~~y~~~~~~~~A~~~----------~~~al~~~p 62 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKY----------ICTYINVQE 62 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHH----------HHHHHHHCT
T ss_pred HHHHHHHHHHcCCHHHHHHH----------HHHHHHhCC
Confidence 35788999999999999999 888888999
No 63
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=23.88 E-value=1.1e+02 Score=19.33 Aligned_cols=41 Identities=15% Similarity=0.258 Sum_probs=28.6
Q ss_pred HHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhh
Q 039157 98 YEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDL 141 (207)
Q Consensus 98 Yrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~ 141 (207)
.|...+. -||+...+ ..+..+.|.+.|..|++.++....+.
T Consensus 16 ~r~~~~~-~~p~~~~~--~~eisk~lg~~Wk~ls~~eK~~y~~~ 56 (71)
T 1ckt_A 16 CREEHKK-KHPDASVN--FSEFSKKCSERWKTMSAKEKGKFEDM 56 (71)
T ss_dssp HHHHHHH-HCTTCCCC--HHHHHHHHHHHHHTCCTTTSHHHHHH
T ss_pred HHHHHHH-HCCCCCCc--HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 3444455 68886532 36788999999999998877655443
No 64
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.81 E-value=1.3e+02 Score=20.12 Aligned_cols=32 Identities=9% Similarity=0.020 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 8 KDAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 8 ~~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
.+.....+..++..|+++.|..+ +.++..++|
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~----------~~~a~~~~~ 59 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAA----------YTQALGLDA 59 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHH----------HHHHHTSCC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHH----------HHHHHHHcc
Confidence 45667899999999999999999 778888888
No 65
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=22.77 E-value=2.1e+02 Score=20.22 Aligned_cols=18 Identities=6% Similarity=0.113 Sum_probs=9.0
Q ss_pred HHHHHHHhcCCHHHHHHH
Q 039157 13 GIAKEYLIDKDTEACRDT 30 (207)
Q Consensus 13 ~~a~~~~~~~d~~~a~~~ 30 (207)
.++.-++..|+++.|..+
T Consensus 120 ~la~~~~~~g~~~~A~~~ 137 (177)
T 2e2e_A 120 LLASDAFMQANYAQAIEL 137 (177)
T ss_dssp HHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHH
Confidence 344444555555555555
No 66
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=22.76 E-value=1.6e+02 Score=19.01 Aligned_cols=42 Identities=17% Similarity=0.216 Sum_probs=29.9
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDL 141 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~ 141 (207)
.+.+|...+. -||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~-~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (79)
T 3u2b_C 14 SQIERRKIME-QSPDMH----NAEISKRLGKRWKLLKDSDKIPFIQE 55 (79)
T ss_dssp HHHHHHHHHT-TSTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHH-HCcCCC----HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3455666666 788754 46888999999999997766554443
No 67
>1k99_A Upstream binding factor 1; alpha-helix, L-shape, DNA binding protein; NMR {Homo sapiens} SCOP: a.21.1.1
Probab=22.15 E-value=1.4e+02 Score=20.69 Aligned_cols=43 Identities=9% Similarity=0.156 Sum_probs=31.2
Q ss_pred HHHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhhh
Q 039157 95 NKHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDLL 142 (207)
Q Consensus 95 k~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~~ 142 (207)
.+..|...+. -||+.. ..+..+.|.+.|..|++.++....+..
T Consensus 22 ~~~~r~~ik~-~~P~~~----~~eisk~lg~~Wk~ls~eeK~~Y~~~A 64 (99)
T 1k99_A 22 FMEKRAKYAK-LHPEMS----NLDLTKILSKKYKELPEKKKMKYIQDF 64 (99)
T ss_dssp HHHHHHHHHT-TCTTSC----SHHHHHHHHHHHHHSCSTTHHHHHHHH
T ss_pred HHHHHHHHHH-HCCCCC----HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3445566666 688754 468889999999999988876655543
No 68
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=21.15 E-value=1.8e+02 Score=19.85 Aligned_cols=37 Identities=8% Similarity=0.112 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhh
Q 039157 10 AADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKN 46 (207)
Q Consensus 10 ~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~ 46 (207)
.....|.+|-..|||+.|..|.+...+.++.......
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~ 50 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVK 50 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcC
Confidence 3447889999999999999996666666666555444
No 69
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=20.95 E-value=1.3e+02 Score=20.37 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=29.8
Q ss_pred HHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHhh
Q 039157 96 KHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYDL 141 (207)
Q Consensus 96 ~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD~ 141 (207)
+.+|...+. -||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 20 ~~~r~~~~~-~~p~~~----~~eisk~lg~~Wk~ls~eeK~~Y~~~ 60 (92)
T 2crj_A 20 NERREQIRT-RHPDLP----FPEITKMLGAEWSKLQPAEKQRYLDE 60 (92)
T ss_dssp HHHHHHHHH-HCTTCC----HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHH-HCCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445555566 688754 56888999999999998887655543
No 70
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=20.13 E-value=1.7e+02 Score=18.88 Aligned_cols=40 Identities=13% Similarity=0.271 Sum_probs=28.4
Q ss_pred HHHHHHhhccCCCCCCCChhHHHHHHHHHHHHHHcCChhhHHHHh
Q 039157 96 KHYEVLSTLFQQPNMCSFVEVKNANKLVTEAWEVLSDARRKEAYD 140 (207)
Q Consensus 96 ~aYrklal~~~HPDk~~~~~a~~~f~~i~~Ay~vLsd~~kR~~YD 140 (207)
+..|...+. -||+.. ..+..+.|.+.|..|++.++....+
T Consensus 19 ~~~r~~~~~-~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~ 58 (77)
T 1hme_A 19 SEYRPKIKG-EHPGLS----IGDVAKKLGEMWNNTAADDKQPYEK 58 (77)
T ss_dssp HHHHHHHHH-HCTTCC----HHHHHHHHHHHHHHSCGGGSHHHHH
T ss_pred HHHHHHHHH-HCCCCC----HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 344555555 688743 5788899999999999877665444
No 71
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.04 E-value=1.9e+02 Score=19.21 Aligned_cols=31 Identities=13% Similarity=-0.037 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhHHHHHHHhhcCC
Q 039157 9 DAADGIAKEYLIDKDTEACRDTLRAIVAVLHDTNKNKNLNP 49 (207)
Q Consensus 9 ~~~~~~a~~~~~~~d~~~a~~~l~~~~~~l~d~~~a~~l~p 49 (207)
.-...++.-++..|+++.|... +.++..++|
T Consensus 66 ~~~~~~a~~~~~~~~~~~A~~~----------~~~~~~~~~ 96 (148)
T 2dba_A 66 VLHRNRAACHLKLEDYDKAETE----------ASKAIEKDG 96 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHH----------HHHHHHHTS
T ss_pred HHHHHHHHHHHHHccHHHHHHH----------HHHHHhhCc
Confidence 4455778888889999999888 566666677
Done!