Query 039158
Match_columns 140
No_of_seqs 150 out of 532
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 06:53:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13857 Ank_5: Ankyrin repeat 99.5 2.7E-14 5.9E-19 91.6 4.2 51 79-138 6-56 (56)
2 PF13637 Ank_4: Ankyrin repeat 99.2 8.9E-12 1.9E-16 78.6 3.8 43 89-140 1-43 (54)
3 KOG0512 Fetal globin-inducing 99.1 4.1E-11 8.9E-16 95.9 3.9 62 78-139 86-171 (228)
4 KOG4412 26S proteasome regulat 99.1 6.9E-11 1.5E-15 94.9 3.7 53 79-139 62-114 (226)
5 KOG4412 26S proteasome regulat 99.0 6.7E-11 1.5E-15 95.0 1.3 52 81-140 29-81 (226)
6 PF12796 Ank_2: Ankyrin repeat 99.0 5.1E-10 1.1E-14 75.4 4.2 42 89-139 26-67 (89)
7 KOG0515 p53-interacting protei 99.0 3.6E-10 7.9E-15 101.9 3.9 53 79-140 573-625 (752)
8 PHA02946 ankyin-like protein; 98.9 1.5E-09 3.2E-14 94.6 5.2 52 79-139 62-113 (446)
9 KOG0195 Integrin-linked kinase 98.9 9.6E-10 2.1E-14 93.9 3.2 49 82-139 60-108 (448)
10 PHA02736 Viral ankyrin protein 98.9 3E-09 6.4E-14 78.8 4.9 52 80-139 82-134 (154)
11 PHA02741 hypothetical protein; 98.9 2.3E-09 4.9E-14 81.3 4.1 31 81-111 52-86 (169)
12 PHA02989 ankyrin repeat protei 98.8 3.4E-09 7.4E-14 92.3 4.7 52 80-140 247-298 (494)
13 PHA02741 hypothetical protein; 98.8 6.1E-09 1.3E-13 79.0 5.2 52 80-139 88-140 (169)
14 PHA03095 ankyrin-like protein; 98.8 5E-09 1.1E-13 89.0 4.9 52 79-139 247-298 (471)
15 KOG0512 Fetal globin-inducing 98.8 3E-09 6.6E-14 85.2 3.0 35 79-113 120-154 (228)
16 PHA02743 Viral ankyrin protein 98.8 8.4E-09 1.8E-13 78.4 5.1 52 80-139 84-136 (166)
17 PHA02795 ankyrin-like protein; 98.8 7.4E-09 1.6E-13 91.4 5.0 52 79-139 211-262 (437)
18 PHA02798 ankyrin-like protein; 98.8 6.4E-09 1.4E-13 90.5 4.6 51 80-139 249-299 (489)
19 PHA02743 Viral ankyrin protein 98.8 6E-09 1.3E-13 79.2 3.4 51 81-140 49-103 (166)
20 PHA02791 ankyrin-like protein; 98.7 1.5E-08 3.4E-13 84.2 5.9 56 84-139 25-102 (284)
21 PLN03192 Voltage-dependent pot 98.7 1E-08 2.3E-13 95.1 4.8 53 78-139 547-599 (823)
22 PHA02791 ankyrin-like protein; 98.7 1.6E-08 3.4E-13 84.2 5.0 62 79-140 84-169 (284)
23 PHA02875 ankyrin repeat protei 98.7 1.8E-08 3.9E-13 84.9 5.2 56 84-139 97-176 (413)
24 PF13606 Ank_3: Ankyrin repeat 98.7 1.7E-08 3.7E-13 57.8 3.3 25 88-112 1-25 (30)
25 PHA02878 ankyrin repeat protei 98.7 1.9E-08 4.2E-13 86.9 5.1 60 80-139 158-242 (477)
26 PHA02716 CPXV016; CPX019; EVM0 98.7 1.2E-08 2.6E-13 95.1 3.5 53 79-140 487-544 (764)
27 PHA02730 ankyrin-like protein; 98.7 1.7E-08 3.6E-13 93.1 4.3 51 81-140 32-86 (672)
28 KOG4177 Ankyrin [Cell wall/mem 98.7 1.2E-08 2.7E-13 98.1 3.5 53 78-139 529-581 (1143)
29 PHA02878 ankyrin repeat protei 98.7 2.5E-08 5.4E-13 86.3 5.0 27 85-111 197-223 (477)
30 PHA02736 Viral ankyrin protein 98.7 6.9E-09 1.5E-13 76.9 1.3 48 84-140 50-101 (154)
31 COG0666 Arp FOG: Ankyrin repea 98.7 3.4E-08 7.3E-13 72.6 4.7 55 79-139 96-155 (235)
32 PHA03100 ankyrin repeat protei 98.6 3.4E-08 7.3E-13 84.3 4.8 52 79-139 240-291 (480)
33 PHA02874 ankyrin repeat protei 98.6 3.7E-08 8.1E-13 84.1 4.9 61 79-139 114-198 (434)
34 PHA02875 ankyrin repeat protei 98.6 3.4E-08 7.4E-13 83.2 4.5 61 80-140 59-144 (413)
35 PHA03095 ankyrin-like protein; 98.6 4.5E-08 9.8E-13 83.2 5.2 34 79-112 73-107 (471)
36 PHA02874 ankyrin repeat protei 98.6 4E-08 8.7E-13 83.9 4.9 61 79-139 147-231 (434)
37 PTZ00322 6-phosphofructo-2-kin 98.6 4.2E-08 9.1E-13 89.6 5.0 52 79-139 105-156 (664)
38 PF00023 Ank: Ankyrin repeat H 98.6 4.6E-08 9.9E-13 56.3 3.3 25 88-112 1-25 (33)
39 KOG0509 Ankyrin repeat and DHH 98.6 3.2E-08 7E-13 89.9 4.0 34 79-112 68-101 (600)
40 PHA02946 ankyin-like protein; 98.6 4.9E-08 1.1E-12 85.2 5.0 51 80-140 199-251 (446)
41 PHA02876 ankyrin repeat protei 98.6 6.7E-08 1.4E-12 87.2 5.0 52 79-139 168-219 (682)
42 PLN03192 Voltage-dependent pot 98.6 8.7E-08 1.9E-12 89.0 5.7 62 79-140 581-664 (823)
43 PHA02884 ankyrin repeat protei 98.5 9.7E-08 2.1E-12 80.5 5.1 54 86-139 67-145 (300)
44 PHA02798 ankyrin-like protein; 98.5 7.9E-08 1.7E-12 83.7 4.6 52 79-139 99-153 (489)
45 PHA02917 ankyrin-like protein; 98.5 1.2E-07 2.6E-12 87.0 4.8 52 79-139 22-76 (661)
46 PHA02859 ankyrin repeat protei 98.5 1.7E-07 3.7E-12 73.7 5.1 61 79-139 113-200 (209)
47 PHA02716 CPXV016; CPX019; EVM0 98.5 1.1E-07 2.4E-12 88.8 4.5 51 80-139 203-255 (764)
48 PHA02859 ankyrin repeat protei 98.5 1.7E-07 3.8E-12 73.7 4.9 60 79-138 76-165 (209)
49 KOG0510 Ankyrin repeat protein 98.5 8.6E-08 1.9E-12 89.7 3.5 62 79-140 263-350 (929)
50 PHA02884 ankyrin repeat protei 98.5 2.1E-07 4.6E-12 78.4 5.0 34 80-113 94-128 (300)
51 PHA03100 ankyrin repeat protei 98.5 1.8E-07 4E-12 79.8 4.5 60 80-139 97-184 (480)
52 KOG0502 Integral membrane anky 98.4 2E-07 4.4E-12 77.2 4.2 62 79-140 150-235 (296)
53 PHA02876 ankyrin repeat protei 98.4 2.7E-07 5.9E-12 83.2 5.0 62 79-140 365-451 (682)
54 KOG0514 Ankyrin repeat protein 98.4 8.7E-08 1.9E-12 83.5 1.0 53 79-139 258-310 (452)
55 PHA02989 ankyrin repeat protei 98.4 3.9E-07 8.5E-12 79.4 4.8 51 79-138 98-152 (494)
56 cd00204 ANK ankyrin repeats; 98.4 6.6E-07 1.4E-11 60.5 4.7 55 85-139 3-81 (126)
57 KOG0509 Ankyrin repeat and DHH 98.4 3.4E-07 7.5E-12 83.3 4.1 62 78-139 100-186 (600)
58 KOG4177 Ankyrin [Cell wall/mem 98.4 3.5E-07 7.6E-12 88.3 4.3 54 78-140 562-615 (1143)
59 KOG0195 Integrin-linked kinase 98.3 3.9E-07 8.5E-12 78.1 3.9 52 80-140 25-76 (448)
60 COG0666 Arp FOG: Ankyrin repea 98.3 6.2E-07 1.3E-11 65.9 4.5 52 80-140 138-189 (235)
61 TIGR00870 trp transient-recept 98.3 5.1E-07 1.1E-11 82.5 3.9 54 86-139 125-216 (743)
62 PHA02917 ankyrin-like protein; 98.3 1E-06 2.2E-11 80.9 5.1 51 80-139 443-493 (661)
63 KOG0505 Myosin phosphatase, re 98.2 8E-07 1.7E-11 79.8 3.9 54 78-140 62-115 (527)
64 KOG0522 Ankyrin repeat protein 98.2 1E-06 2.3E-11 79.3 4.1 52 79-139 45-96 (560)
65 PHA02792 ankyrin-like protein; 98.2 1.2E-06 2.6E-11 80.5 4.4 51 80-139 401-451 (631)
66 KOG0510 Ankyrin repeat protein 98.2 1.3E-06 2.8E-11 82.0 4.2 62 79-140 296-386 (929)
67 PF13637 Ank_4: Ankyrin repeat 98.2 1.6E-06 3.4E-11 54.4 3.3 31 79-109 24-54 (54)
68 PHA02730 ankyrin-like protein; 98.2 1.6E-06 3.5E-11 80.2 4.6 51 80-139 453-504 (672)
69 KOG0508 Ankyrin repeat protein 98.2 6.1E-07 1.3E-11 80.5 1.6 51 80-139 141-191 (615)
70 KOG0505 Myosin phosphatase, re 98.1 1.7E-06 3.7E-11 77.7 3.4 51 80-139 189-239 (527)
71 KOG1710 MYND Zn-finger and ank 98.1 3.1E-06 6.7E-11 72.4 3.8 52 79-139 35-87 (396)
72 cd00204 ANK ankyrin repeats; 98.0 7.8E-06 1.7E-10 55.2 4.5 57 83-139 34-114 (126)
73 PHA02792 ankyrin-like protein; 97.9 9.6E-06 2.1E-10 74.7 4.3 52 80-140 166-224 (631)
74 PF12796 Ank_2: Ankyrin repeat 97.9 1.3E-05 2.9E-10 53.7 3.6 34 79-112 49-82 (89)
75 KOG0514 Ankyrin repeat protein 97.8 2.3E-05 5E-10 68.6 3.8 51 80-138 364-414 (452)
76 PHA02795 ankyrin-like protein; 97.7 2.2E-05 4.8E-10 69.6 3.2 54 87-140 147-230 (437)
77 KOG4214 Myotrophin and similar 97.7 3.4E-05 7.4E-10 56.7 3.4 42 88-138 33-74 (117)
78 KOG0508 Ankyrin repeat protein 97.7 2.9E-05 6.3E-10 69.9 3.0 52 80-140 108-159 (615)
79 TIGR00870 trp transient-recept 97.7 4.4E-05 9.5E-10 69.9 4.1 49 79-140 42-91 (743)
80 KOG0502 Integral membrane anky 97.6 2.5E-05 5.5E-10 64.9 1.8 52 79-139 216-267 (296)
81 KOG0507 CASK-interacting adapt 97.6 2.1E-05 4.5E-10 73.6 0.8 62 78-139 38-123 (854)
82 KOG0818 GTPase-activating prot 97.5 6.2E-05 1.3E-09 68.1 3.4 43 87-138 165-207 (669)
83 smart00248 ANK ankyrin repeats 97.5 0.00014 2.9E-09 36.8 3.3 25 88-112 1-25 (30)
84 PTZ00322 6-phosphofructo-2-kin 97.4 0.00015 3.3E-09 66.5 3.6 41 91-140 84-124 (664)
85 KOG0515 p53-interacting protei 97.3 0.00019 4.1E-09 65.6 3.2 35 79-113 606-640 (752)
86 KOG0705 GTPase-activating prot 97.2 0.00026 5.6E-09 65.1 3.3 47 84-139 656-702 (749)
87 KOG0507 CASK-interacting adapt 97.2 0.00024 5.1E-09 66.7 3.0 50 81-139 107-156 (854)
88 KOG0782 Predicted diacylglycer 97.1 0.00027 5.9E-09 65.3 2.2 53 80-139 890-942 (1004)
89 KOG4214 Myotrophin and similar 96.9 0.0013 2.7E-08 48.5 3.8 35 79-113 57-91 (117)
90 KOG0783 Uncharacterized conser 96.7 0.00037 8.1E-09 66.5 0.1 48 82-138 45-93 (1267)
91 PF13857 Ank_5: Ankyrin repeat 96.6 0.00072 1.6E-08 42.9 0.9 19 122-140 7-25 (56)
92 KOG3676 Ca2+-permeable cation 96.3 0.0036 7.9E-08 59.0 3.7 25 88-112 239-263 (782)
93 KOG0506 Glutaminase (contains 96.3 0.0014 3E-08 59.4 0.9 51 80-138 530-580 (622)
94 KOG2384 Major histocompatibili 96.1 0.0059 1.3E-07 49.7 3.5 32 81-112 4-35 (223)
95 KOG0520 Uncharacterized conser 96.1 0.0046 9.9E-08 59.6 3.3 58 79-139 631-688 (975)
96 PF13606 Ank_3: Ankyrin repeat 96.1 0.0017 3.8E-08 36.8 0.3 11 130-140 1-11 (30)
97 KOG0818 GTPase-activating prot 95.7 0.012 2.6E-07 53.7 4.0 48 84-140 122-176 (669)
98 PF00023 Ank: Ankyrin repeat H 95.7 0.0041 8.9E-08 35.2 0.7 10 130-139 1-10 (33)
99 KOG2505 Ankyrin repeat protein 95.4 0.016 3.4E-07 52.8 3.6 51 80-139 421-471 (591)
100 KOG1710 MYND Zn-finger and ank 95.3 0.015 3.3E-07 50.2 3.0 29 85-113 75-103 (396)
101 KOG0521 Putative GTPase activa 95.0 0.012 2.6E-07 55.8 1.7 35 79-113 644-680 (785)
102 KOG0520 Uncharacterized conser 94.9 0.0052 1.1E-07 59.2 -0.9 62 79-140 564-650 (975)
103 KOG4369 RTK signaling protein 94.9 0.026 5.7E-07 56.0 3.8 63 77-139 778-865 (2131)
104 KOG0521 Putative GTPase activa 94.5 0.022 4.8E-07 54.0 2.2 16 123-138 681-696 (785)
105 KOG0783 Uncharacterized conser 94.2 0.038 8.2E-07 53.3 3.1 42 87-137 84-125 (1267)
106 KOG3676 Ca2+-permeable cation 94.0 0.051 1.1E-06 51.5 3.5 56 78-140 262-317 (782)
107 KOG4369 RTK signaling protein 93.8 0.04 8.6E-07 54.8 2.3 30 83-112 751-780 (2131)
108 KOG0506 Glutaminase (contains 92.9 0.073 1.6E-06 48.5 2.5 45 86-139 503-547 (622)
109 KOG0511 Ankyrin repeat protein 91.3 0.17 3.7E-06 45.2 2.9 41 90-139 37-77 (516)
110 KOG0511 Ankyrin repeat protein 89.7 0.34 7.3E-06 43.4 3.3 35 79-113 59-93 (516)
111 KOG0522 Ankyrin repeat protein 83.1 1.2 2.6E-05 41.0 3.3 35 79-113 78-112 (560)
112 KOG0705 GTPase-activating prot 80.0 1.4 3E-05 41.4 2.5 56 79-134 684-739 (749)
113 KOG3609 Receptor-activated Ca2 70.5 3.7 8E-05 39.6 2.8 62 78-139 51-139 (822)
114 KOG0782 Predicted diacylglycer 64.7 5.7 0.00012 37.6 2.7 32 82-113 927-958 (1004)
115 KOG3609 Receptor-activated Ca2 64.5 6.1 0.00013 38.1 2.9 27 87-113 129-155 (822)
116 PF12645 HTH_16: Helix-turn-he 48.3 29 0.00063 22.9 3.4 22 92-113 2-23 (65)
117 KOG4591 Uncharacterized conser 33.1 16 0.00034 30.5 0.3 47 88-138 221-267 (280)
118 PF11929 DUF3447: Domain of un 31.8 51 0.0011 21.7 2.6 23 90-112 7-29 (76)
119 KOG2384 Major histocompatibili 27.7 72 0.0016 26.3 3.2 32 80-111 37-68 (223)
No 1
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.49 E-value=2.7e-14 Score=91.62 Aligned_cols=51 Identities=27% Similarity=0.337 Sum_probs=32.5
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhh
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAA 138 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiA 138 (140)
..+.+..|..|.||||+||+.|+.++|+.||..+ ++.|..|..|+||||||
T Consensus 6 ~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g---------~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 6 PADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG---------ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT-----------TT---TTS--HHHH-
T ss_pred cCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc---------CCCCCCcCCCCCHHHhC
Confidence 4678999999999999999999999999999665 66888899999999998
No 2
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23 E-value=8.9e-12 Score=78.58 Aligned_cols=43 Identities=35% Similarity=0.470 Sum_probs=34.0
Q ss_pred CChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 89 SHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 89 G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
|.||||+||+.|+.++++.|++.+ .++|..|.+|+||||+|++
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~---------~din~~d~~g~t~lh~A~~ 43 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG---------ADINAQDEDGRTPLHYAAK 43 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT---------SGTT-B-TTS--HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC---------CCCCCCCCCCCCHHHHHHH
Confidence 789999999999999999999885 4477778999999999973
No 3
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.12 E-value=4.1e-11 Score=95.88 Aligned_cols=62 Identities=26% Similarity=0.287 Sum_probs=46.8
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCc---------------------hhHHHHH---HhccCCCCCCCc
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDS---------------------SEAKELL---LKQNQEAKNGYD 133 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~---------------------e~v~~LL---a~~N~~~~~G~T 133 (140)
+--.++..|.+|+||||-||+.||+++|..||..+.. +++..|| +++|+..+.-||
T Consensus 86 ~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~lt 165 (228)
T KOG0512|consen 86 KANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLT 165 (228)
T ss_pred ccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccch
Confidence 3467899999999999999999999999999976521 3333444 366666666677
Q ss_pred hhhhhc
Q 039158 134 SFHAAA 139 (140)
Q Consensus 134 PLHiAA 139 (140)
|||+||
T Consensus 166 pLhlaa 171 (228)
T KOG0512|consen 166 PLHLAA 171 (228)
T ss_pred hhHHhh
Confidence 777765
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.09 E-value=6.9e-11 Score=94.95 Aligned_cols=53 Identities=26% Similarity=0.319 Sum_probs=44.2
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
+-.+|..|..||||||+||..|+.++|+.||...+ +++|..+++|+|||||||
T Consensus 62 nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~--------advna~tn~G~T~LHyAa 114 (226)
T KOG4412|consen 62 NVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSG--------ADVNATTNGGQTCLHYAA 114 (226)
T ss_pred CCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCC--------CCcceecCCCcceehhhh
Confidence 56788889999999999999999999999998743 456777777777777776
No 5
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=6.7e-11 Score=95.00 Aligned_cols=52 Identities=19% Similarity=0.314 Sum_probs=42.2
Q ss_pred cCCCCCC-CCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 81 NKDLPGK-RSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 81 ~~~~~~~-~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
+.+..+. +|.||||+||.-||.++|..|++... -.+|..|..|||||||||+
T Consensus 29 SL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~n--------v~~ddkDdaGWtPlhia~s 81 (226)
T KOG4412|consen 29 SLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPN--------VKPDDKDDAGWTPLHIAAS 81 (226)
T ss_pred hhhccccccCCceeeeeeecCchhHHHHHHhcCC--------CCCCCccccCCchhhhhhh
Confidence 4455554 99999999999999999999997432 2356668899999999985
No 6
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.99 E-value=5.1e-10 Score=75.45 Aligned_cols=42 Identities=36% Similarity=0.479 Sum_probs=37.8
Q ss_pred CChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 89 SHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 89 G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
|+||||+||..|++++++.|++.+ .++|..|.+|+||||+|+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g---------~~~~~~~~~g~t~L~~A~ 67 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENG---------ADINSQDKNGNTALHYAA 67 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTT---------TCTT-BSTTSSBHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhc---------ccccccCCCCCCHHHHHH
Confidence 899999999999999999999986 457877889999999997
No 7
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.97 E-value=3.6e-10 Score=101.86 Aligned_cols=53 Identities=19% Similarity=0.271 Sum_probs=49.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
.-++..+|..|.|+||-|.-.||.+||+.||+++ +++|..|.+||||||+||+
T Consensus 573 v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~g---------anVNa~DSdGWTPLHCAAS 625 (752)
T KOG0515|consen 573 VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFG---------ANVNAADSDGWTPLHCAAS 625 (752)
T ss_pred hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcC---------CcccCccCCCCchhhhhhh
Confidence 4567888999999999999999999999999997 6799999999999999985
No 8
>PHA02946 ankyin-like protein; Provisional
Probab=98.91 E-value=1.5e-09 Score=94.63 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=44.6
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-.+++..|..|.||||+||+.|+.++|+.||+.+ +++|..|.+|+||||+|+
T Consensus 62 Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~G---------Adin~~d~~g~TpLh~A~ 113 (446)
T PHA02946 62 GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHG---------ADPNACDKQHKTPLYYLS 113 (446)
T ss_pred cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCc---------CCCCCCCCCCCCHHHHHH
Confidence 4788999999999999999999999999999986 456777777777777764
No 9
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.89 E-value=9.6e-10 Score=93.92 Aligned_cols=49 Identities=22% Similarity=0.268 Sum_probs=35.3
Q ss_pred CCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 82 KDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 82 ~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
++.++...|||||+||.+||.++|+.||+.. +++|..|..|.|||||||
T Consensus 60 vn~tnmgddtplhlaaahghrdivqkll~~k---------advnavnehgntplhyac 108 (448)
T KOG0195|consen 60 VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRK---------ADVNAVNEHGNTPLHYAC 108 (448)
T ss_pred cccccCCCCcchhhhhhcccHHHHHHHHHHh---------cccchhhccCCCchhhhh
Confidence 4555566666666666666666666666554 578999999999999997
No 10
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.87 E-value=3e-09 Score=78.84 Aligned_cols=52 Identities=12% Similarity=-0.020 Sum_probs=43.9
Q ss_pred ccCCCCC-CCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPG-KRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~-~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...+..+ ..|+||||+|++.|+.++++.||.... +++|..|..|+||||+|+
T Consensus 82 adin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g--------~d~n~~~~~g~tpL~~A~ 134 (154)
T PHA02736 82 ADINGKERVFGNTPLHIAVYTQNYELATWLCNQPG--------VNMEILNYAFKTPYYVAC 134 (154)
T ss_pred CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCC--------CCCccccCCCCCHHHHHH
Confidence 4567777 589999999999999999999997532 457888889999999997
No 11
>PHA02741 hypothetical protein; Provisional
Probab=98.86 E-value=2.3e-09 Score=81.32 Aligned_cols=31 Identities=6% Similarity=0.195 Sum_probs=16.8
Q ss_pred cCCCCCCCCChhhHHHHHcCC----HHHHHHHHhc
Q 039158 81 NKDLPGKRSHLQLHLPARTGN----LSRVTEILQG 111 (140)
Q Consensus 81 ~~~~~~~~G~TpLHlAAr~G~----l~~Vk~Ll~~ 111 (140)
..+..|..|+||||+||..|+ .++++.|++.
T Consensus 52 ~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ 86 (169)
T PHA02741 52 ALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL 86 (169)
T ss_pred hhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc
Confidence 344555556666666666555 3455555543
No 12
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.83 E-value=3.4e-09 Score=92.28 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=47.4
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
..++..|..|+||||+||..|+.++|+.||+.+ +++|..|..|+||||+|+.
T Consensus 247 advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~G---------adin~~d~~G~TpL~~A~~ 298 (494)
T PHA02989 247 IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLG---------DDIYNVSKDGDTVLTYAIK 298 (494)
T ss_pred CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcC---------CCccccCCCCCCHHHHHHH
Confidence 467889999999999999999999999999987 5788889999999999973
No 13
>PHA02741 hypothetical protein; Provisional
Probab=98.81 E-value=6.1e-09 Score=78.96 Aligned_cols=52 Identities=12% Similarity=0.061 Sum_probs=43.5
Q ss_pred ccCCCCCC-CCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGK-RSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~-~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...+..+. .|+||||+|++.|+.++|+.||...+ +++|..|..|+||||+|+
T Consensus 88 adin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g--------~~~~~~n~~g~tpL~~A~ 140 (169)
T PHA02741 88 ADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPG--------IDLHFCNADNKSPFELAI 140 (169)
T ss_pred CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCC--------CCCCcCCCCCCCHHHHHH
Confidence 45677774 89999999999999999999997532 456777889999999996
No 14
>PHA03095 ankyrin-like protein; Provisional
Probab=98.81 E-value=5e-09 Score=89.05 Aligned_cols=52 Identities=12% Similarity=0.092 Sum_probs=45.1
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...++..|..|+||||+||..|+.++|+.||+.+ +++|..|.+|+||||+|+
T Consensus 247 g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~g---------ad~n~~~~~g~tpl~~A~ 298 (471)
T PHA03095 247 GISINARNRYGQTPLHYAAVFNNPRACRRLIALG---------ADINAVSSDGNTPLSLMV 298 (471)
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---------CCCcccCCCCCCHHHHHH
Confidence 4567888889999999999999999999999876 568888899999999996
No 15
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.80 E-value=3e-09 Score=85.25 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=31.7
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
-.++++....||||||.||...+.+++-.||+++.
T Consensus 120 gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhga 154 (228)
T KOG0512|consen 120 GANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGA 154 (228)
T ss_pred cCCcccccccCccchhhhhcccchhHHHHHHhccC
Confidence 36778889999999999999999999999999874
No 16
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.78 E-value=8.4e-09 Score=78.37 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=42.3
Q ss_pred ccCCCCC-CCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPG-KRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~-~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...+..+ ..|+||||+||..|+.++++.|+.... +++|..|..|+||||+|+
T Consensus 84 adin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g--------ad~~~~d~~g~tpL~~A~ 136 (166)
T PHA02743 84 ADINARELGTGNTLLHIAASTKNYELAEWLCRQLG--------VNLGAINYQHETAYHIAY 136 (166)
T ss_pred CCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccC--------CCccCcCCCCCCHHHHHH
Confidence 5567777 479999999999999999999986322 456777889999999996
No 17
>PHA02795 ankyrin-like protein; Provisional
Probab=98.77 E-value=7.4e-09 Score=91.37 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=47.9
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
..+.+.+|..|.||||+||..|+.++|+.||+.+ +++|..|..|+||||+|+
T Consensus 211 GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G---------AdIN~~d~~G~TpLh~Aa 262 (437)
T PHA02795 211 IEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG---------ANVNAVMSNGYTCLDVAV 262 (437)
T ss_pred cCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC---------CCCCCcCCCCCCHHHHHH
Confidence 4678889999999999999999999999999987 678888999999999997
No 18
>PHA02798 ankyrin-like protein; Provisional
Probab=98.77 E-value=6.4e-09 Score=90.48 Aligned_cols=51 Identities=14% Similarity=-0.030 Sum_probs=47.3
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
.+++.+|..|.||||+||..|+.++++.||+.+ +++|..|..|+||||+|+
T Consensus 249 ~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~G---------Adin~~d~~G~TpL~~A~ 299 (489)
T PHA02798 249 IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLG---------GDINIITELGNTCLFTAF 299 (489)
T ss_pred CCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcC---------CcccccCCCCCcHHHHHH
Confidence 578889999999999999999999999999987 668888999999999997
No 19
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.75 E-value=6e-09 Score=79.18 Aligned_cols=51 Identities=14% Similarity=0.057 Sum_probs=41.7
Q ss_pred cCCCCCCCCChhhHHHHHcCCHHH---HHHHHhcCCchhHHHHHHhccCCC-CCCCchhhhhcC
Q 039158 81 NKDLPGKRSHLQLHLPARTGNLSR---VTEILQGCDSSEAKELLLKQNQEA-KNGYDSFHAAAK 140 (140)
Q Consensus 81 ~~~~~~~~G~TpLHlAAr~G~l~~---Vk~Ll~~~~~e~v~~LLa~~N~~~-~~G~TPLHiAAk 140 (140)
..+..|..|+||||+||..|+.++ ++.|+..+ +++|..+ ..|+||||+|+.
T Consensus 49 ~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G---------adin~~d~~~g~TpLh~A~~ 103 (166)
T PHA02743 49 LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG---------ADINARELGTGNTLLHIAAS 103 (166)
T ss_pred hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC---------CCCCCCCCCCCCcHHHHHHH
Confidence 356678899999999999998765 78888876 5678776 589999999973
No 20
>PHA02791 ankyrin-like protein; Provisional
Probab=98.75 E-value=1.5e-08 Score=84.22 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=34.5
Q ss_pred CCCCCCChhhHHHHHcCCHHHHHHHHhcCC-------------------chhHHHHH---HhccCCCCCCCchhhhhc
Q 039158 84 LPGKRSHLQLHLPARTGNLSRVTEILQGCD-------------------SSEAKELL---LKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 84 ~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~-------------------~e~v~~LL---a~~N~~~~~G~TPLHiAA 139 (140)
..|.+|.||||+||..|+.++|+.||..+. .+.+..|+ +++|..|..|+||||+||
T Consensus 25 ~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa 102 (284)
T PHA02791 25 KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAV 102 (284)
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 456666677777777777777666665532 13344444 245666777777777776
No 21
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.73 E-value=1e-08 Score=95.07 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=47.5
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...+.+..|..|.||||+||..|+.++|+.|++.+ +++|..|.+|+||||+|+
T Consensus 547 ~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g---------adin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 547 AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHA---------CNVHIRDANGNTALWNAI 599 (823)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcC---------CCCCCcCCCCCCHHHHHH
Confidence 35778999999999999999999999999999976 457888889999999986
No 22
>PHA02791 ankyrin-like protein; Provisional
Probab=98.71 E-value=1.6e-08 Score=84.16 Aligned_cols=62 Identities=13% Similarity=0.067 Sum_probs=45.4
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC----------------------chhHHHHHHh-ccCCC-CCCCch
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD----------------------SSEAKELLLK-QNQEA-KNGYDS 134 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~----------------------~e~v~~LLa~-~N~~~-~~G~TP 134 (140)
...++..|..|+||||+||..|+.++|+.|++.+. .+.+..||.. .+..| ..|+||
T Consensus 84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~Tp 163 (284)
T PHA02791 84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSC 163 (284)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccH
Confidence 36778889999999999999999999999998652 1334455543 22223 358999
Q ss_pred hhhhcC
Q 039158 135 FHAAAK 140 (140)
Q Consensus 135 LHiAAk 140 (140)
||+||.
T Consensus 164 Lh~Aa~ 169 (284)
T PHA02791 164 IHITIK 169 (284)
T ss_pred HHHHHH
Confidence 999974
No 23
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.71 E-value=1.8e-08 Score=84.94 Aligned_cols=56 Identities=16% Similarity=0.068 Sum_probs=33.1
Q ss_pred CCCCCCChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHH---HhccCCCCCCCchhhhhc
Q 039158 84 LPGKRSHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELL---LKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 84 ~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LL---a~~N~~~~~G~TPLHiAA 139 (140)
..+..|.||||+||..|+.++|+.|++.+. .+.+..|+ +.+|..|..|+||||+|+
T Consensus 97 ~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~ 176 (413)
T PHA02875 97 VFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAM 176 (413)
T ss_pred cccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 344456666666666666666666665431 02233333 245666778888888886
No 24
>PF13606 Ank_3: Ankyrin repeat
Probab=98.69 E-value=1.7e-08 Score=57.84 Aligned_cols=25 Identities=32% Similarity=0.458 Sum_probs=23.7
Q ss_pred CCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 88 RSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 88 ~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
+|+||||+||+.|+.++|+.||+.+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 5999999999999999999999986
No 25
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.69 E-value=1.9e-08 Score=86.94 Aligned_cols=60 Identities=13% Similarity=0.194 Sum_probs=33.3
Q ss_pred ccCCCCCCC-CChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHH---HhccCCCCCCCch
Q 039158 80 KNKDLPGKR-SHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELL---LKQNQEAKNGYDS 134 (140)
Q Consensus 80 ~~~~~~~~~-G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LL---a~~N~~~~~G~TP 134 (140)
..++..+.. |.||||+||..|+.++|+.||+.+. .+.+..|+ +++|..|..|+||
T Consensus 158 adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~Tp 237 (477)
T PHA02878 158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTP 237 (477)
T ss_pred CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 345555555 6666666666666666666665432 12233333 2455556667777
Q ss_pred hhhhc
Q 039158 135 FHAAA 139 (140)
Q Consensus 135 LHiAA 139 (140)
||+|+
T Consensus 238 Lh~A~ 242 (477)
T PHA02878 238 LHISV 242 (477)
T ss_pred HHHHH
Confidence 77665
No 26
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.67 E-value=1.2e-08 Score=95.15 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=46.2
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHH-----HHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLS-----RVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~-----~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
....+..|..|+||||+||..|+.+ +++.||+.+ +++|..|++|+||||+|++
T Consensus 487 ~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G---------ADIN~~d~~G~TPLh~A~~ 544 (764)
T PHA02716 487 RYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQ---------YNINIPTKNGVTPLMLTMR 544 (764)
T ss_pred hccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCC---------CCCcccCCCCCCHHHHHHH
Confidence 4567888999999999999999875 459999887 6789999999999999974
No 27
>PHA02730 ankyrin-like protein; Provisional
Probab=98.67 E-value=1.7e-08 Score=93.13 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=44.6
Q ss_pred cCC-CCCCCCChhhHHHHHcC---CHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 81 NKD-LPGKRSHLQLHLPARTG---NLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 81 ~~~-~~~~~G~TpLHlAAr~G---~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
..+ ..|..|.||||+|+..| +.++|+.||+.+ +++|..|..|+||||+||.
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~G---------Adin~kD~~G~TPLh~Aa~ 86 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRG---------VERLCRNNEGLTPLGVYSK 86 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCC---------CCCcccCCCCCChHHHHHH
Confidence 444 77889999999999997 599999999987 6788889999999999863
No 28
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.67 E-value=1.2e-08 Score=98.13 Aligned_cols=53 Identities=32% Similarity=0.405 Sum_probs=44.3
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
.....+.++.+|+||||+||..||+++|+.||+.+ +++|..++.||||||.||
T Consensus 529 ~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~g---------Adv~ak~~~G~TPLH~Aa 581 (1143)
T KOG4177|consen 529 HGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHG---------ADVNAKDKLGYTPLHQAA 581 (1143)
T ss_pred cCCceehhcccccchHHHHHhcCCchHHHHhhhCC---------ccccccCCCCCChhhHHH
Confidence 36788999999999999999999999999999987 456666666677776665
No 29
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.67 E-value=2.5e-08 Score=86.29 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=13.6
Q ss_pred CCCCCChhhHHHHHcCCHHHHHHHHhc
Q 039158 85 PGKRSHLQLHLPARTGNLSRVTEILQG 111 (140)
Q Consensus 85 ~~~~G~TpLHlAAr~G~l~~Vk~Ll~~ 111 (140)
.|..|+||||+|++.|+.++|+.|++.
T Consensus 197 ~d~~g~tpLh~A~~~~~~~iv~~Ll~~ 223 (477)
T PHA02878 197 PDKTNNSPLHHAVKHYNKPIVHILLEN 223 (477)
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 344455555555555555555555544
No 30
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.66 E-value=6.9e-09 Score=76.85 Aligned_cols=48 Identities=10% Similarity=0.129 Sum_probs=33.2
Q ss_pred CCCCCCChhhHHHHHcCCHH---HHHHHHhcCCchhHHHHHHhccCCC-CCCCchhhhhcC
Q 039158 84 LPGKRSHLQLHLPARTGNLS---RVTEILQGCDSSEAKELLLKQNQEA-KNGYDSFHAAAK 140 (140)
Q Consensus 84 ~~~~~G~TpLHlAAr~G~l~---~Vk~Ll~~~~~e~v~~LLa~~N~~~-~~G~TPLHiAAk 140 (140)
..|..|.||||+||..|+++ +++.|++.+ +++|..+ .+|+||||+|++
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g---------adin~~~~~~g~T~Lh~A~~ 101 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG---------ADINGKERVFGNTPLHIAVY 101 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHHHcC---------CCccccCCCCCCcHHHHHHH
Confidence 34666777777777777664 355566554 4577776 589999999973
No 31
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.65 E-value=3.4e-08 Score=72.62 Aligned_cols=55 Identities=24% Similarity=0.296 Sum_probs=45.3
Q ss_pred cccCCCCCCCCChhhHHHHHcCC-----HHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGN-----LSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~-----l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-...+..+..|+||||+|+..|+ .++++.||+.+.. ....+..|.+|+||||+|+
T Consensus 96 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~------~~~~~~~~~~g~tpl~~A~ 155 (235)
T COG0666 96 GADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD------LDVNNLRDEDGNTPLHWAA 155 (235)
T ss_pred CCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCC------CCCccccCCCCCchhHHHH
Confidence 35569999999999999999999 9999999998731 0134555889999999986
No 32
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.63 E-value=3.4e-08 Score=84.34 Aligned_cols=52 Identities=19% Similarity=0.119 Sum_probs=47.4
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
....+.+|..|.||||+|+..|+.++|+.|++.+ +++|..|.+|+||||+|+
T Consensus 240 g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~g---------ad~n~~d~~g~tpl~~A~ 291 (480)
T PHA03100 240 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG---------ANPNLVNKYGDTPLHIAI 291 (480)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---------CCCCccCCCCCcHHHHHH
Confidence 3678889999999999999999999999999987 567888999999999996
No 33
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.63 E-value=3.7e-08 Score=84.11 Aligned_cols=61 Identities=21% Similarity=0.250 Sum_probs=47.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHHH---hccCCCCCCCch
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELLL---KQNQEAKNGYDS 134 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LLa---~~N~~~~~G~TP 134 (140)
....+..+..|.||||+||..|+.++|+.|++.+. .+.+..|+. +.|..+..|+||
T Consensus 114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tp 193 (434)
T PHA02874 114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESP 193 (434)
T ss_pred cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 35677889999999999999999999999998753 133555553 455667788888
Q ss_pred hhhhc
Q 039158 135 FHAAA 139 (140)
Q Consensus 135 LHiAA 139 (140)
||+|+
T Consensus 194 L~~A~ 198 (434)
T PHA02874 194 LHNAA 198 (434)
T ss_pred HHHHH
Confidence 88886
No 34
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.62 E-value=3.4e-08 Score=83.23 Aligned_cols=61 Identities=18% Similarity=0.203 Sum_probs=48.5
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC----------------------chhHHHHH---HhccCCCCCCCch
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD----------------------SSEAKELL---LKQNQEAKNGYDS 134 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~----------------------~e~v~~LL---a~~N~~~~~G~TP 134 (140)
..++..+..|.||||+|+..|++++|+.|++.+. .+.+..|+ +++|..+..|+||
T Consensus 59 a~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tp 138 (413)
T PHA02875 59 AIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSP 138 (413)
T ss_pred CCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCH
Confidence 4566677889999999999999999999998642 14455565 3677778889999
Q ss_pred hhhhcC
Q 039158 135 FHAAAK 140 (140)
Q Consensus 135 LHiAAk 140 (140)
||+|+.
T Consensus 139 Lh~A~~ 144 (413)
T PHA02875 139 LHLAVM 144 (413)
T ss_pred HHHHHH
Confidence 999973
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=98.62 E-value=4.5e-08 Score=83.21 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=29.3
Q ss_pred cccCCCCCCCCChhhHHHHHcC-CHHHHHHHHhcC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTG-NLSRVTEILQGC 112 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G-~l~~Vk~Ll~~~ 112 (140)
-...+..+..|+||||+||..| +.++++.|++.+
T Consensus 73 Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~g 107 (471)
T PHA03095 73 GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAG 107 (471)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcC
Confidence 3577888889999999999999 599999999876
No 36
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.62 E-value=4e-08 Score=83.90 Aligned_cols=61 Identities=15% Similarity=0.251 Sum_probs=48.4
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHHH---hccCCCCCCCch
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELLL---KQNQEAKNGYDS 134 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LLa---~~N~~~~~G~TP 134 (140)
...++..+..|.||||+||..|+.++++.|++.+. .+.+..|+. +.+..+..|+||
T Consensus 147 gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~Tp 226 (434)
T PHA02874 147 GADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTP 226 (434)
T ss_pred CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCH
Confidence 46778888999999999999999999999998653 144555553 455667899999
Q ss_pred hhhhc
Q 039158 135 FHAAA 139 (140)
Q Consensus 135 LHiAA 139 (140)
||+|+
T Consensus 227 L~~A~ 231 (434)
T PHA02874 227 LHNAI 231 (434)
T ss_pred HHHHH
Confidence 99997
No 37
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.61 E-value=4.2e-08 Score=89.64 Aligned_cols=52 Identities=15% Similarity=0.193 Sum_probs=47.3
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
..+.+..|..|+||||+||..|+.++|+.||+.+ +++|..|.+|+||||+|+
T Consensus 105 Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G---------advn~~d~~G~TpLh~A~ 156 (664)
T PTZ00322 105 GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFG---------ADPTLLDKDGKTPLELAE 156 (664)
T ss_pred CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC---------CCCCCCCCCCCCHHHHHH
Confidence 3577889999999999999999999999999986 567888999999999997
No 38
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.61 E-value=4.6e-08 Score=56.26 Aligned_cols=25 Identities=24% Similarity=0.308 Sum_probs=23.8
Q ss_pred CCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 88 RSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 88 ~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
+|+||||+||..|+.++|+.||..+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~g 25 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHG 25 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCc
Confidence 5999999999999999999999976
No 39
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.60 E-value=3.2e-08 Score=89.89 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=21.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
..+++.+|.+|.|+||+||-.+++++++.||+.+
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~g 101 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHG 101 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcC
Confidence 4556666666666666666666666666666654
No 40
>PHA02946 ankyin-like protein; Provisional
Probab=98.60 E-value=4.9e-08 Score=85.20 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=38.0
Q ss_pred ccCCCCCCCCChhhHHHHHcC--CHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 80 KNKDLPGKRSHLQLHLPARTG--NLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G--~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
.+++..|..|.||||+||..| +.++++.|+.. +++|..|..|+||||+|+.
T Consensus 199 adin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~g----------adin~~d~~G~TpLh~A~~ 251 (446)
T PHA02946 199 ISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPS----------TDVNKQNKFGDSPLTLLIK 251 (446)
T ss_pred CCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHcC----------CCCCCCCCCCCCHHHHHHH
Confidence 456667777777777777765 67777777642 4578888899999999873
No 41
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.56 E-value=6.7e-08 Score=87.18 Aligned_cols=52 Identities=17% Similarity=0.117 Sum_probs=46.9
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-.+++..|..|+||||+||+.|+.++|+.|++.+ ++.|..+.+|+||||+|+
T Consensus 168 Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~G---------ad~n~~~~~g~t~L~~A~ 219 (682)
T PHA02876 168 GADVNAKDIYCITPIHYAAERGNAKMVNLLLSYG---------ADVNIIALDDLSVLECAV 219 (682)
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC---------CCcCccCCCCCCHHHHHH
Confidence 4678889999999999999999999999999987 557777889999999986
No 42
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.56 E-value=8.7e-08 Score=89.00 Aligned_cols=62 Identities=15% Similarity=0.121 Sum_probs=52.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC-------------------chhHHHHHH---hccCCCCCCCchhh
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD-------------------SSEAKELLL---KQNQEAKNGYDSFH 136 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~-------------------~e~v~~LLa---~~N~~~~~G~TPLH 136 (140)
.++++..|..|+||||+||..||.++++.|+..+. .+.+..|+. ++|..|.+|+||||
T Consensus 581 gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh 660 (823)
T PLN03192 581 ACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQ 660 (823)
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 57889999999999999999999999999987542 244666663 68888999999999
Q ss_pred hhcC
Q 039158 137 AAAK 140 (140)
Q Consensus 137 iAAk 140 (140)
+|+.
T Consensus 661 ~A~~ 664 (823)
T PLN03192 661 VAMA 664 (823)
T ss_pred HHHH
Confidence 9973
No 43
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.54 E-value=9.7e-08 Score=80.47 Aligned_cols=54 Identities=11% Similarity=-0.016 Sum_probs=36.8
Q ss_pred CCCCChhhHHHHHcCCHHHHHHHHhcCC----------------------chhHHHHH---HhccCCCCCCCchhhhhc
Q 039158 86 GKRSHLQLHLPARTGNLSRVTEILQGCD----------------------SSEAKELL---LKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 86 ~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~----------------------~e~v~~LL---a~~N~~~~~G~TPLHiAA 139 (140)
+..|.||||+||+.|+.++++.|++.+. .+.+..|+ +++|..|..|+||||+|+
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~ 145 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL 145 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 4578888888888888888888887652 02233333 356666777888888875
No 44
>PHA02798 ankyrin-like protein; Provisional
Probab=98.54 E-value=7.9e-08 Score=83.67 Aligned_cols=52 Identities=12% Similarity=0.128 Sum_probs=40.6
Q ss_pred cccCCCCCCCCChhhHHHHHcC---CHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTG---NLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G---~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-.+++..|..|+||||+|+..| +.++++.|++.+ +++|..|.+|+||||+|+
T Consensus 99 GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G---------advn~~d~~g~tpL~~a~ 153 (489)
T PHA02798 99 GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENG---------ADTTLLDKDGFTMLQVYL 153 (489)
T ss_pred CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcC---------CCccccCCCCCcHHHHHH
Confidence 4677888888999999998876 688888888876 456666777777777765
No 45
>PHA02917 ankyrin-like protein; Provisional
Probab=98.50 E-value=1.2e-07 Score=86.99 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=44.5
Q ss_pred cccCCCCCCCCChhhHHHHHc---CCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPART---GNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~---G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
+...+..|..|.||||+||+. |+.++|+.||+.+ +++|..+.+|+||||+|+
T Consensus 22 ~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g---------a~v~~~~~~g~TpL~~Aa 76 (661)
T PHA02917 22 RDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSG---------TNPLHKNWRQLTPLEEYT 76 (661)
T ss_pred cCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCC---------CCccccCCCCCCHHHHHH
Confidence 455677799999999998666 8899999999987 567878889999999997
No 46
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.50 E-value=1.7e-07 Score=73.72 Aligned_cols=61 Identities=11% Similarity=0.140 Sum_probs=43.7
Q ss_pred cccCCCCCCCCChhhHHHHH--cCCHHHHHHHHhcCC----------------------chhHHHHH---HhccCCCCCC
Q 039158 79 KKNKDLPGKRSHLQLHLPAR--TGNLSRVTEILQGCD----------------------SSEAKELL---LKQNQEAKNG 131 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr--~G~l~~Vk~Ll~~~~----------------------~e~v~~LL---a~~N~~~~~G 131 (140)
..+++..|..|.||||+|+. .|++++++.||+.+. .+++..|+ +++|..|..|
T Consensus 113 gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g 192 (209)
T PHA02859 113 GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSG 192 (209)
T ss_pred CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 46777888888888888775 467888888887652 02233344 3567778899
Q ss_pred Cchhhhhc
Q 039158 132 YDSFHAAA 139 (140)
Q Consensus 132 ~TPLHiAA 139 (140)
+||||+|+
T Consensus 193 ~tpl~la~ 200 (209)
T PHA02859 193 YNCYDLIK 200 (209)
T ss_pred CCHHHHHh
Confidence 99999986
No 47
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.49 E-value=1.1e-07 Score=88.81 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=40.1
Q ss_pred ccCCCCCCCCChhhHHHHHcCCH--HHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNL--SRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l--~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
..++..|..|.||||+||+.|+. ++|+.||+.+ +++|..|.+|+||||+|+
T Consensus 203 ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~G---------ADVN~kD~~G~TPLh~Ai 255 (764)
T PHA02716 203 VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELG---------GDMDMKCVNGMSPIMTYI 255 (764)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcC---------CCCCCCCCCCCCHHHHHH
Confidence 56777777888888888888753 7788888776 578888899999999874
No 48
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.49 E-value=1.7e-07 Score=73.68 Aligned_cols=60 Identities=7% Similarity=-0.016 Sum_probs=41.5
Q ss_pred cccCCCCC-CCCChhhHHHHHc---CCHHHHHHHHhcCC-----------------------chhHHHHH---HhccCCC
Q 039158 79 KKNKDLPG-KRSHLQLHLPART---GNLSRVTEILQGCD-----------------------SSEAKELL---LKQNQEA 128 (140)
Q Consensus 79 ~~~~~~~~-~~G~TpLHlAAr~---G~l~~Vk~Ll~~~~-----------------------~e~v~~LL---a~~N~~~ 128 (140)
..+++..+ ..|.||||+||.. |+.++++.|++.+. .+.+..|+ +++|..|
T Consensus 76 gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d 155 (209)
T PHA02859 76 GADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKD 155 (209)
T ss_pred CCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccc
Confidence 46777776 4899999998863 58999999998652 02333344 2455557
Q ss_pred CCCCchhhhh
Q 039158 129 KNGYDSFHAA 138 (140)
Q Consensus 129 ~~G~TPLHiA 138 (140)
.+|.||||+|
T Consensus 156 ~~g~t~Lh~~ 165 (209)
T PHA02859 156 FDNNNILYSY 165 (209)
T ss_pred CCCCcHHHHH
Confidence 7788888754
No 49
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.48 E-value=8.6e-08 Score=89.68 Aligned_cols=62 Identities=27% Similarity=0.291 Sum_probs=47.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCc---------------------hhHHHHHH-----hccCCCCCCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDS---------------------SEAKELLL-----KQNQEAKNGY 132 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~---------------------e~v~~LLa-----~~N~~~~~G~ 132 (140)
|--++..|.+|.||||+||+.|+.+.|..|+..+.. +-|..||. ..|..|-.|.
T Consensus 263 kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~ 342 (929)
T KOG0510|consen 263 KELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGM 342 (929)
T ss_pred HHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCC
Confidence 556788999999999999999999999999998731 22555554 2344466788
Q ss_pred chhhhhcC
Q 039158 133 DSFHAAAK 140 (140)
Q Consensus 133 TPLHiAAk 140 (140)
||||+||+
T Consensus 343 tpLHlaa~ 350 (929)
T KOG0510|consen 343 TPLHLAAK 350 (929)
T ss_pred Cchhhhhh
Confidence 88888763
No 50
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.46 E-value=2.1e-07 Score=78.40 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=29.0
Q ss_pred ccCCCC-CCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 80 KNKDLP-GKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 80 ~~~~~~-~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
..++.. +..|.||||+|+..|+.++++.|+..+.
T Consensus 94 ADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GA 128 (300)
T PHA02884 94 ADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGA 128 (300)
T ss_pred CCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 566664 4579999999999999999999998864
No 51
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.45 E-value=1.8e-07 Score=79.83 Aligned_cols=60 Identities=22% Similarity=0.299 Sum_probs=34.7
Q ss_pred ccCCCCCCCCChhhHHHH--HcCCHHHHHHHHhcCC-----------------------chhHHHHH---HhccCCCCCC
Q 039158 80 KNKDLPGKRSHLQLHLPA--RTGNLSRVTEILQGCD-----------------------SSEAKELL---LKQNQEAKNG 131 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAA--r~G~l~~Vk~Ll~~~~-----------------------~e~v~~LL---a~~N~~~~~G 131 (140)
...+..+..|.||||+|| ..|+.++|+.|++.+. .+.+..|+ +++|..+..|
T Consensus 97 a~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g 176 (480)
T PHA03100 97 ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYG 176 (480)
T ss_pred CCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCC
Confidence 344556666666666666 6666666666666431 01122222 2455556778
Q ss_pred Cchhhhhc
Q 039158 132 YDSFHAAA 139 (140)
Q Consensus 132 ~TPLHiAA 139 (140)
+||||+|+
T Consensus 177 ~tpL~~A~ 184 (480)
T PHA03100 177 YTPLHIAV 184 (480)
T ss_pred CCHHHHHH
Confidence 88888876
No 52
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.44 E-value=2e-07 Score=77.16 Aligned_cols=62 Identities=18% Similarity=0.121 Sum_probs=52.6
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHHH---hccCCCCCCCch
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELLL---KQNQEAKNGYDS 134 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LLa---~~N~~~~~G~TP 134 (140)
.-.++..|+.|.|||.+||+.||+.+|+.||..+. .++|+.||. ++|..|-||-||
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTp 229 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTP 229 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCce
Confidence 56789999999999999999999999999999874 155666663 677779999999
Q ss_pred hhhhcC
Q 039158 135 FHAAAK 140 (140)
Q Consensus 135 LHiAAk 140 (140)
|-||++
T Consensus 230 LlyAvr 235 (296)
T KOG0502|consen 230 LLYAVR 235 (296)
T ss_pred eeeeec
Confidence 999874
No 53
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.42 E-value=2.7e-07 Score=83.25 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=50.6
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCc----------------------hhHHHHH---HhccCCCCCCCc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDS----------------------SEAKELL---LKQNQEAKNGYD 133 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~----------------------e~v~~LL---a~~N~~~~~G~T 133 (140)
...++..|..|.||||+||..|+.++|+.|++.+.. ..+..|+ +++|..|..|+|
T Consensus 365 gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~T 444 (682)
T PHA02876 365 GANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLST 444 (682)
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCCh
Confidence 467888999999999999999999999999987531 1244444 367888999999
Q ss_pred hhhhhcC
Q 039158 134 SFHAAAK 140 (140)
Q Consensus 134 PLHiAAk 140 (140)
|||+||.
T Consensus 445 pLh~Aa~ 451 (682)
T PHA02876 445 PLHYACK 451 (682)
T ss_pred HHHHHHH
Confidence 9999973
No 54
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.39 E-value=8.7e-08 Score=83.54 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=43.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
.|.+|+.|.+|+|+||+|+.++|+++|+.||+.+- +++|..|+-||||+.+||
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgv--------C~VD~qNrAGYtpiMLaA 310 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDSGV--------CDVDQQNRAGYTPVMLAA 310 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhccCc--------ccccccccccccHHHHHH
Confidence 79999999999999999999999999999999752 345555555666665554
No 55
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.37 E-value=3.9e-07 Score=79.43 Aligned_cols=51 Identities=12% Similarity=0.109 Sum_probs=38.0
Q ss_pred cccCCCCCCCCChhhHHHHHc---CCHHHHHHHHhcCCchhHHHHHHhc-cCCCCCCCchhhhh
Q 039158 79 KKNKDLPGKRSHLQLHLPART---GNLSRVTEILQGCDSSEAKELLLKQ-NQEAKNGYDSFHAA 138 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~---G~l~~Vk~Ll~~~~~e~v~~LLa~~-N~~~~~G~TPLHiA 138 (140)
-.+.+..+..|+||||.|+.. |+.++|+.||+.+ +++ |..|..|+||||+|
T Consensus 98 Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~G---------adin~~~d~~g~tpLh~a 152 (494)
T PHA02989 98 GADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKG---------INVNDVKNSRGYNLLHMY 152 (494)
T ss_pred CCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCC---------CCcccccCCCCCCHHHHH
Confidence 467888999999999988765 6899999999876 334 34455566666655
No 56
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.36 E-value=6.6e-07 Score=60.49 Aligned_cols=55 Identities=31% Similarity=0.383 Sum_probs=39.1
Q ss_pred CCCCCChhhHHHHHcCCHHHHHHHHhcCCc---------------------hhHHHHHH---hccCCCCCCCchhhhhc
Q 039158 85 PGKRSHLQLHLPARTGNLSRVTEILQGCDS---------------------SEAKELLL---KQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 85 ~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~---------------------e~v~~LLa---~~N~~~~~G~TPLHiAA 139 (140)
.+..|.||||.|++.|+.++++.|+..+.. +.+..++. ..|..+..|.||||+|+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~ 81 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAA 81 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 457899999999999999999999986531 22333333 24445667888888775
No 57
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.36 E-value=3.4e-07 Score=83.31 Aligned_cols=62 Identities=26% Similarity=0.257 Sum_probs=47.2
Q ss_pred ccccCCCCC-CCCChhhHHHHHcCCHHHHHHHHhcCCc---------------------hhHHHHH---HhccCCCCCCC
Q 039158 78 RKKNKDLPG-KRSHLQLHLPARTGNLSRVTEILQGCDS---------------------SEAKELL---LKQNQEAKNGY 132 (140)
Q Consensus 78 ~~~~~~~~~-~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~---------------------e~v~~LL---a~~N~~~~~G~ 132 (140)
+--.+|..+ .-|-||||+|||.||+.+|..||+++.. -.|..+| +++|..|.+|.
T Consensus 100 ~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~gr 179 (600)
T KOG0509|consen 100 HGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGR 179 (600)
T ss_pred cCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCC
Confidence 357888888 7889999999999999999999998741 1133333 35666688888
Q ss_pred chhhhhc
Q 039158 133 DSFHAAA 139 (140)
Q Consensus 133 TPLHiAA 139 (140)
||||+||
T Consensus 180 TpLmwAa 186 (600)
T KOG0509|consen 180 TPLMWAA 186 (600)
T ss_pred CHHHHHH
Confidence 8888887
No 58
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.35 E-value=3.5e-07 Score=88.33 Aligned_cols=54 Identities=19% Similarity=0.253 Sum_probs=49.9
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
+.-++++.++.|+||||.||..||.+++.+|++.+ +.+|..|.+|.||||||++
T Consensus 562 ~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~G---------A~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 562 HGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHG---------ASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred CCccccccCCCCCChhhHHHHcChHHHHHHHHHcC---------CCCCcccccCcchhHHHHH
Confidence 36788999999999999999999999999999998 6789999999999999973
No 59
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.35 E-value=3.9e-07 Score=78.13 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=46.7
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
-..+.-|.+|++|||+||+.||..+|+.||..+ +.+|..|....||||+||.
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rg---------arvn~tnmgddtplhlaaa 76 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRG---------ARVNSTNMGDDTPLHLAAA 76 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhcc---------cccccccCCCCcchhhhhh
Confidence 456778899999999999999999999999987 6689888889999999983
No 60
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.34 E-value=6.2e-07 Score=65.87 Aligned_cols=52 Identities=23% Similarity=0.311 Sum_probs=45.4
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
...+..|..|+||||+|+..|+.++|+.|+..+ +.++..+..|+||||+|+.
T Consensus 138 ~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~---------~~~~~~~~~g~t~l~~a~~ 189 (235)
T COG0666 138 DVNNLRDEDGNTPLHWAALNGDADIVELLLEAG---------ADPNSRNSYGVTALDPAAK 189 (235)
T ss_pred CCccccCCCCCchhHHHHHcCchHHHHHHHhcC---------CCCcccccCCCcchhhhcc
Confidence 477777999999999999999999999999986 3456667899999999974
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.30 E-value=5.1e-07 Score=82.45 Aligned_cols=54 Identities=20% Similarity=0.083 Sum_probs=41.7
Q ss_pred CCCCChhhHHHHHcCCHHHHHHHHhcCC-----------------------------------chhHHHHH---HhccCC
Q 039158 86 GKRSHLQLHLPARTGNLSRVTEILQGCD-----------------------------------SSEAKELL---LKQNQE 127 (140)
Q Consensus 86 ~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~-----------------------------------~e~v~~LL---a~~N~~ 127 (140)
...|.||||+||..|+.++|+.||+.+. .+.+..|+ +++|..
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 4579999999999999999999998642 12233444 346677
Q ss_pred CCCCCchhhhhc
Q 039158 128 AKNGYDSFHAAA 139 (140)
Q Consensus 128 ~~~G~TPLHiAA 139 (140)
|..|+||||+|+
T Consensus 205 d~~g~T~Lh~A~ 216 (743)
T TIGR00870 205 DSLGNTLLHLLV 216 (743)
T ss_pred hhhhhHHHHHHH
Confidence 888999999986
No 62
>PHA02917 ankyrin-like protein; Provisional
Probab=98.27 E-value=1e-06 Score=80.91 Aligned_cols=51 Identities=27% Similarity=0.339 Sum_probs=46.9
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
.+.+.+|..|.||||+|+..|+.++++.||+.+ +++|..|..|+||||+|+
T Consensus 443 AdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~G---------Adin~~d~~G~T~L~~A~ 493 (661)
T PHA02917 443 KDINMIDKRGETLLHKAVRYNKQSLVSLLLESG---------SDVNIRSNNGYTCIAIAI 493 (661)
T ss_pred CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCc---------CCCCCCCCCCCCHHHHHH
Confidence 467889999999999999999999999999987 678888999999999996
No 63
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.25 E-value=8e-07 Score=79.79 Aligned_cols=54 Identities=24% Similarity=0.314 Sum_probs=49.4
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
+.-..+..|.+|.|+||-+|...|.++|++|++.+ +.+|+.|.+||||||.||.
T Consensus 62 ~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~g---------a~Vn~~d~e~wtPlhaaas 115 (527)
T KOG0505|consen 62 RGASPNLCNVDGLTALHQACIDDNLEMVKFLVENG---------ANVNAQDNEGWTPLHAAAS 115 (527)
T ss_pred cCCCccccCCccchhHHHHHhcccHHHHHHHHHhc---------CCccccccccCCcchhhcc
Confidence 34777999999999999999999999999999987 6799999999999999973
No 64
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=1e-06 Score=79.26 Aligned_cols=52 Identities=19% Similarity=0.293 Sum_probs=44.8
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-.+++..|.+|.||||+|++-||.++++.|+..+. ++-..|++||+|||-|+
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~A---------dv~~kN~~gWs~L~EAv 96 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGA---------DVSIKNNEGWSPLHEAV 96 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCC---------CccccccccccHHHHHH
Confidence 35888999999999999999999999999999873 34444678999999986
No 65
>PHA02792 ankyrin-like protein; Provisional
Probab=98.22 E-value=1.2e-06 Score=80.51 Aligned_cols=51 Identities=14% Similarity=0.066 Sum_probs=46.7
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...+..|..|+||||+|+..|+.++++.|++.+ +++|..|..|.||||+|+
T Consensus 401 ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~G---------ADIN~kD~~G~TpL~~A~ 451 (631)
T PHA02792 401 DDINKIDKHGRSILYYCIESHSVSLVEWLIDNG---------ADINITTKYGSTCIGICV 451 (631)
T ss_pred CccccccccCcchHHHHHHcCCHHHHHHHHHCC---------CCCCCcCCCCCCHHHHHH
Confidence 467889999999999999999999999999987 568888999999999985
No 66
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.20 E-value=1.3e-06 Score=82.02 Aligned_cols=62 Identities=26% Similarity=0.301 Sum_probs=41.4
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC-----------------------chhHHHHHH---hcc---CCCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD-----------------------SSEAKELLL---KQN---QEAK 129 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~-----------------------~e~v~~LLa---~~N---~~~~ 129 (140)
-++.+.++.++.||||.||+.|++++|+.||+..+ -..++.||. ..+ ..|.
T Consensus 296 Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~ 375 (929)
T KOG0510|consen 296 GASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADS 375 (929)
T ss_pred CCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhccccccc
Confidence 56667777777777777777777777777777322 022334442 222 4488
Q ss_pred CCCchhhhhcC
Q 039158 130 NGYDSFHAAAK 140 (140)
Q Consensus 130 ~G~TPLHiAAk 140 (140)
.|.||||.||+
T Consensus 376 dg~TaLH~Aa~ 386 (929)
T KOG0510|consen 376 DGNTALHLAAK 386 (929)
T ss_pred CCchhhhHHHH
Confidence 99999999985
No 67
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.19 E-value=1.6e-06 Score=54.36 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=23.8
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHH
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEIL 109 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll 109 (140)
..+.+.+|..|+||||+||..||+++++.||
T Consensus 24 ~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 24 GADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp TSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 4678888999999999999999999999986
No 68
>PHA02730 ankyrin-like protein; Provisional
Probab=98.19 E-value=1.6e-06 Score=80.17 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=46.3
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCC-CCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAK-NGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~-~G~TPLHiAA 139 (140)
..++..|..|.||||+||..|+.++++.||+.+ +++|..|. .|+||||+|+
T Consensus 453 ADINakD~~G~TPLh~Aa~~~~~eive~LI~~G---------AdIN~~d~~~g~TaL~~Aa 504 (672)
T PHA02730 453 DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYG---------ASVNTTSRSIINTAIQKSS 504 (672)
T ss_pred cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCC---------CCCCCCCCcCCcCHHHHHH
Confidence 468999999999999999999999999999987 56888886 5999999996
No 69
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.18 E-value=6.1e-07 Score=80.50 Aligned_cols=51 Identities=16% Similarity=0.315 Sum_probs=29.2
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
.+.++.|++|.|-||+||..||.+|+++|++.+ +++|..+..|.|+||.+|
T Consensus 141 ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~g---------ADvn~ks~kGNTALH~ca 191 (615)
T KOG0508|consen 141 ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQG---------ADVNAKSYKGNTALHDCA 191 (615)
T ss_pred CCCcccccCCCeeEEeeeccCchHHHHHHHHhC---------CCcchhcccCchHHHhhh
Confidence 344444444444444444444444444444443 577877788888888776
No 70
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.13 E-value=1.7e-06 Score=77.73 Aligned_cols=51 Identities=27% Similarity=0.343 Sum_probs=44.5
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
...++.+.+|-|.||+||..|..+++++||..+ ..+|..|..||||||.||
T Consensus 189 ~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag---------~~~~~~D~dgWtPlHAAA 239 (527)
T KOG0505|consen 189 AELDARHARGATALHVAAANGYTEVAALLLQAG---------YSVNIKDYDGWTPLHAAA 239 (527)
T ss_pred ccccccccccchHHHHHHhhhHHHHHHHHHHhc---------cCcccccccCCCcccHHH
Confidence 356777778999999999999999999999986 457777889999999987
No 71
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.07 E-value=3.1e-06 Score=72.43 Aligned_cols=52 Identities=21% Similarity=0.146 Sum_probs=46.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCC-CCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQE-AKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~-~~~G~TPLHiAA 139 (140)
...++..|..|.|+|-.||..|++++|+.||+.+ +++|.. +..+|||||.||
T Consensus 35 vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~g---------aDvN~~qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 35 VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELG---------ADVNDKQHGTLYTPLMFAA 87 (396)
T ss_pred hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhC---------CCcCcccccccccHHHHHH
Confidence 5678899999999999999999999999999987 667755 466999999997
No 72
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.04 E-value=7.8e-06 Score=55.18 Aligned_cols=57 Identities=30% Similarity=0.374 Sum_probs=42.2
Q ss_pred CCCCCCCChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHHHh---ccCCCCCCCchhhhh
Q 039158 83 DLPGKRSHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELLLK---QNQEAKNGYDSFHAA 138 (140)
Q Consensus 83 ~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LLa~---~N~~~~~G~TPLHiA 138 (140)
+..+..|.||||.|+..++.++++.|+..+. .+.+..|+.. .+..+..|.||||+|
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~ 113 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLA 113 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 6777788888888888888888888887651 1234444442 556678899999998
Q ss_pred c
Q 039158 139 A 139 (140)
Q Consensus 139 A 139 (140)
.
T Consensus 114 ~ 114 (126)
T cd00204 114 A 114 (126)
T ss_pred H
Confidence 5
No 73
>PHA02792 ankyrin-like protein; Provisional
Probab=97.92 E-value=9.6e-06 Score=74.65 Aligned_cols=52 Identities=8% Similarity=-0.050 Sum_probs=46.1
Q ss_pred ccCCCCCCCCChhhHHHHHcC-------CHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 80 KNKDLPGKRSHLQLHLPARTG-------NLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G-------~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
+..+..+..|.||||+|+..+ +.++++.||+.+ +..|..|..|+||||+|+.
T Consensus 166 ~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g---------~~~~~~d~~g~t~l~~~~~ 224 (631)
T PHA02792 166 YTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHE---------KEMRYYTYREHTTLYYYVD 224 (631)
T ss_pred cccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCC---------CCcCccCCCCChHHHHHHH
Confidence 456788999999999999999 899999999997 5578788899999999973
No 74
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=97.90 E-value=1.3e-05 Score=53.67 Aligned_cols=34 Identities=26% Similarity=0.333 Sum_probs=30.4
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
...++..+..|+||||+||..|+.++++.|++.+
T Consensus 49 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 82 (89)
T PF12796_consen 49 GADINSQDKNGNTALHYAAENGNLEIVKLLLEHG 82 (89)
T ss_dssp TTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTT
T ss_pred cccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4677888899999999999999999999999986
No 75
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.77 E-value=2.3e-05 Score=68.65 Aligned_cols=51 Identities=14% Similarity=0.123 Sum_probs=41.6
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhh
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAA 138 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiA 138 (140)
.++|+.|.+|-|+|.+||.+||.++|++||.... .+.-..|.+|-|+|.||
T Consensus 364 AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~--------cd~sLtD~DgSTAl~IA 414 (452)
T KOG0514|consen 364 ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPS--------CDISLTDVDGSTALSIA 414 (452)
T ss_pred CCCccccCCccHHHhhhhhhChHHHHHHHhccCc--------ccceeecCCCchhhhhH
Confidence 6788999999999999999999999999998742 23334477899999987
No 76
>PHA02795 ankyrin-like protein; Provisional
Probab=97.73 E-value=2.2e-05 Score=69.55 Aligned_cols=54 Identities=17% Similarity=-0.104 Sum_probs=39.4
Q ss_pred CCCChhhHHHHHcCCHHHHHHHHhcCCc---------------------------hhHHHHH---HhccCCCCCCCchhh
Q 039158 87 KRSHLQLHLPARTGNLSRVTEILQGCDS---------------------------SEAKELL---LKQNQEAKNGYDSFH 136 (140)
Q Consensus 87 ~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~---------------------------e~v~~LL---a~~N~~~~~G~TPLH 136 (140)
.++.||||.|+..|+.++|+.|++.+.. +.+..|+ +++|..|..|+||||
T Consensus 147 ~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh 226 (437)
T PHA02795 147 IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLY 226 (437)
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHH
Confidence 3557888888888888888888877620 2233344 478888999999999
Q ss_pred hhcC
Q 039158 137 AAAK 140 (140)
Q Consensus 137 iAAk 140 (140)
+||.
T Consensus 227 ~Aa~ 230 (437)
T PHA02795 227 RAIY 230 (437)
T ss_pred HHHH
Confidence 9973
No 77
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=97.71 E-value=3.4e-05 Score=56.71 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=37.5
Q ss_pred CCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhh
Q 039158 88 RSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAA 138 (140)
Q Consensus 88 ~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiA 138 (140)
.|.||||+||-.|++.+++.||..+ +++|..|+-|-|||--|
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iG---------A~i~~kDKygITPLLsA 74 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIG---------ANIQDKDKYGITPLLSA 74 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhc---------cccCCccccCCcHHHHH
Confidence 7999999999999999999999987 56788889999998655
No 78
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.66 E-value=2.9e-05 Score=69.93 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=44.3
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
.++|-+....-|||-.||..||+++|++|++.+ ++.+..|+.|.|.|||||.
T Consensus 108 a~VN~tT~TNStPLraACfDG~leivKyLvE~g---------ad~~IanrhGhTcLmIa~y 159 (615)
T KOG0508|consen 108 ASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHG---------ADPEIANRHGHTCLMIACY 159 (615)
T ss_pred CccccccccCCccHHHHHhcchhHHHHHHHHcC---------CCCcccccCCCeeEEeeec
Confidence 677777777888888888888888888888876 5678889999999999983
No 79
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.65 E-value=4.4e-05 Score=69.92 Aligned_cols=49 Identities=20% Similarity=0.167 Sum_probs=42.0
Q ss_pred cccCCCCCCCCChhhH-HHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 79 KKNKDLPGKRSHLQLH-LPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLH-lAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
..+.+..|..|.|||| +|+..++.++++.|++.+. .+..|.||||+|+.
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-------------~~~~G~T~Lh~A~~ 91 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-------------RGAVGDTLLHAISL 91 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-------------CCCcChHHHHHHHh
Confidence 5678888999999999 9999999999999998751 34679999999974
No 80
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=97.62 E-value=2.5e-05 Score=64.89 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=42.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
--+++.-|-+|-|||-+|+|.||++||+.||..+ +++|+.+.+||+++-+|.
T Consensus 216 ~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sG---------Ad~t~e~dsGy~~mdlAV 267 (296)
T KOG0502|consen 216 EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSG---------ADVTQEDDSGYWIMDLAV 267 (296)
T ss_pred CCCcceeccCCCceeeeeecCChHHHHHHHHhcC---------CCcccccccCCcHHHHHH
Confidence 4567777778888888888888888888888776 678999999999998874
No 81
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.58 E-value=2.1e-05 Score=73.64 Aligned_cols=62 Identities=21% Similarity=0.112 Sum_probs=48.9
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC---------------------chhHHHHH---HhccCCCCCCCc
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD---------------------SSEAKELL---LKQNQEAKNGYD 133 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~---------------------~e~v~~LL---a~~N~~~~~G~T 133 (140)
|.-+.+..|..|+|.||.||..|+..++++|++..+ .+.++.+| +.+|..+-.|.|
T Consensus 38 rsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~t 117 (854)
T KOG0507|consen 38 RSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENET 117 (854)
T ss_pred CCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcC
Confidence 567888899999999999999999999999888642 14555555 356766778999
Q ss_pred hhhhhc
Q 039158 134 SFHAAA 139 (140)
Q Consensus 134 PLHiAA 139 (140)
|||.||
T Consensus 118 plhlaa 123 (854)
T KOG0507|consen 118 PLHLAA 123 (854)
T ss_pred ccchhh
Confidence 999887
No 82
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.55 E-value=6.2e-05 Score=68.12 Aligned_cols=43 Identities=14% Similarity=0.248 Sum_probs=37.3
Q ss_pred CCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhh
Q 039158 87 KRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAA 138 (140)
Q Consensus 87 ~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiA 138 (140)
..|+||||+||+.|+..-+++|+-.+ ++++..|.+|.||+-+|
T Consensus 165 ekg~TpLHvAAk~Gq~~Q~ElL~vYG---------AD~~a~d~~GmtP~~~A 207 (669)
T KOG0818|consen 165 EKGNTPLHVAAKAGQILQAELLAVYG---------ADPGAQDSSGMTPVDYA 207 (669)
T ss_pred ccCCchhHHHHhccchhhhhHHhhcc---------CCCCCCCCCCCcHHHHH
Confidence 35899999999999999988877665 77899999999999987
No 83
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.53 E-value=0.00014 Score=36.80 Aligned_cols=25 Identities=36% Similarity=0.464 Sum_probs=23.1
Q ss_pred CCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 88 RSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 88 ~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
.|+||||+|+..|+.++++.|+..+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4899999999999999999999875
No 84
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=97.36 E-value=0.00015 Score=66.49 Aligned_cols=41 Identities=22% Similarity=0.289 Sum_probs=36.1
Q ss_pred hhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 91 LQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 91 TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
++||.||..|++++|+.||..+ +++|..|.+|+||||+||.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G---------adin~~d~~G~TpLh~Aa~ 124 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG---------ADPNCRDYDGRTPLHIACA 124 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC---------CCCCCcCCCCCcHHHHHHH
Confidence 4589999999999999999876 4578888999999999973
No 85
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=97.28 E-value=0.00019 Score=65.60 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=33.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
-.++++.|.+||||||+||.++++-+++.|++.+.
T Consensus 606 ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~Ga 640 (752)
T KOG0515|consen 606 GANVNAADSDGWTPLHCAASCNNVPMCKQLVESGA 640 (752)
T ss_pred CCcccCccCCCCchhhhhhhcCchHHHHHHHhccc
Confidence 57899999999999999999999999999999874
No 86
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.21 E-value=0.00026 Score=65.10 Aligned_cols=47 Identities=19% Similarity=0.184 Sum_probs=37.5
Q ss_pred CCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 84 LPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 84 ~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
..+.+|.|+||+||+.|++.+.++||=.+ .++-..|.+|.|||.||-
T Consensus 656 ~~~~~grt~LHLa~~~gnVvl~QLLiWyg---------~dv~~rda~g~t~l~yar 702 (749)
T KOG0705|consen 656 CGEGDGRTALHLAARKGNVVLAQLLIWYG---------VDVMARDAHGRTALFYAR 702 (749)
T ss_pred ccCCCCcchhhhhhhhcchhHHHHHHHhC---------ccceecccCCchhhhhHh
Confidence 34556789999999999999999998443 344555778999999983
No 87
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.20 E-value=0.00024 Score=66.75 Aligned_cols=50 Identities=18% Similarity=0.138 Sum_probs=33.4
Q ss_pred cCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 81 NKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 81 ~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
..+..+..|.||||+||.+||+++|.+||..+ ++.-..|+++.|+|-+|+
T Consensus 107 ~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~---------adp~i~nns~~t~ldlA~ 156 (854)
T KOG0507|consen 107 ILNAVNIENETPLHLAAQHGHLEVVFYLLKKN---------ADPFIRNNSKETVLDLAS 156 (854)
T ss_pred CCCcccccCcCccchhhhhcchHHHHHHHhcC---------CCccccCcccccHHHHHH
Confidence 45566666777777777777777777776664 223333678999998886
No 88
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.09 E-value=0.00027 Score=65.25 Aligned_cols=53 Identities=32% Similarity=0.317 Sum_probs=43.5
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-+....+.+..|-||+||..|+-++|++||+++++| ||...+ .+|.|+||-||
T Consensus 890 g~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~e----lld~~d---e~get~lhkaa 942 (1004)
T KOG0782|consen 890 GSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE----LLDMAD---ETGETALHKAA 942 (1004)
T ss_pred CceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHH----HHHHHh---hhhhHHHHHHH
Confidence 355677888999999999999999999999999854 444333 57999999886
No 89
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=96.90 E-value=0.0013 Score=48.52 Aligned_cols=35 Identities=20% Similarity=0.056 Sum_probs=32.3
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
-.+.+.+|+.|-|||-.|...||.++|+.||+.+.
T Consensus 57 GA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GA 91 (117)
T KOG4214|consen 57 GANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGA 91 (117)
T ss_pred ccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCc
Confidence 46889999999999999999999999999999873
No 90
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.75 E-value=0.00037 Score=66.46 Aligned_cols=48 Identities=19% Similarity=0.307 Sum_probs=39.4
Q ss_pred CCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCC-CCCCchhhhh
Q 039158 82 KDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEA-KNGYDSFHAA 138 (140)
Q Consensus 82 ~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~-~~G~TPLHiA 138 (140)
.++.|.-|.|+||+|+..|...+++-||.++ .+++..| .+||||||-|
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhG---------idv~vqD~ESG~taLHRa 93 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHG---------IDVFVQDEESGYTALHRA 93 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcC---------ceeeeccccccchHhhHh
Confidence 6778888999999999999999999999886 4455544 6799999876
No 91
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=96.64 E-value=0.00072 Score=42.90 Aligned_cols=19 Identities=32% Similarity=0.389 Sum_probs=10.5
Q ss_pred HhccCCCCCCCchhhhhcC
Q 039158 122 LKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 122 a~~N~~~~~G~TPLHiAAk 140 (140)
..+|..|..|+||||+||+
T Consensus 7 ~~~n~~d~~G~T~LH~A~~ 25 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAAR 25 (56)
T ss_dssp --TT---TTS--HHHHHHH
T ss_pred CCCcCcCCCCCcHHHHHHH
Confidence 4577888999999999983
No 92
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.31 E-value=0.0036 Score=58.98 Aligned_cols=25 Identities=20% Similarity=0.088 Sum_probs=23.3
Q ss_pred CCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 88 RSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 88 ~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
=|..||-+||=.++.++|++|++.+
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~~g 263 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLAHG 263 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHhcC
Confidence 4889999999999999999999976
No 93
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.31 E-value=0.0014 Score=59.36 Aligned_cols=51 Identities=18% Similarity=0.340 Sum_probs=41.9
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhh
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAA 138 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiA 138 (140)
+..+-.|-+..|+||+||..||+++|+.||+.+. .++|..|+=|.|||.-|
T Consensus 530 ~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k--------v~~~~kDRw~rtPlDdA 580 (622)
T KOG0506|consen 530 MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACK--------VDPDPKDRWGRTPLDDA 580 (622)
T ss_pred ccccccccccchhheeecccCceeHHHHHHHHHc--------CCCChhhccCCCcchHh
Confidence 5667788899999999999999999999999864 34566677888888654
No 94
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=96.12 E-value=0.0059 Score=49.73 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=29.7
Q ss_pred cCCCCCCCCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 81 NKDLPGKRSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 81 ~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
+.|++|.=|||||..||..|+.++|.+|+..+
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg 35 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRG 35 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccC
Confidence 46788999999999999999999999999987
No 95
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=96.12 E-value=0.0046 Score=59.56 Aligned_cols=58 Identities=16% Similarity=0.156 Sum_probs=42.5
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
.-..+++|..||||||+|+..|+..++..|++.+..+- ++-+++..+-+|.|+--+|.
T Consensus 631 ~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~---~~tdps~~~p~g~ta~~la~ 688 (975)
T KOG0520|consen 631 GVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPG---AVTDPSPETPGGKTAADLAR 688 (975)
T ss_pred ccccccccCCCCcccchHhhcCHHHHHHHHHHhccccc---cccCCCCCCCCCCchhhhhh
Confidence 46789999999999999999999999999997653111 22234444556777766653
No 96
>PF13606 Ank_3: Ankyrin repeat
Probab=96.10 E-value=0.0017 Score=36.83 Aligned_cols=11 Identities=45% Similarity=0.640 Sum_probs=9.7
Q ss_pred CCCchhhhhcC
Q 039158 130 NGYDSFHAAAK 140 (140)
Q Consensus 130 ~G~TPLHiAAk 140 (140)
+||||||+||+
T Consensus 1 ~G~T~Lh~A~~ 11 (30)
T PF13606_consen 1 NGNTPLHLAAS 11 (30)
T ss_pred CCCCHHHHHHH
Confidence 59999999984
No 97
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=95.71 E-value=0.012 Score=53.71 Aligned_cols=48 Identities=31% Similarity=0.325 Sum_probs=38.5
Q ss_pred CCCCCCChh------hHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCC-CCCCchhhhhcC
Q 039158 84 LPGKRSHLQ------LHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEA-KNGYDSFHAAAK 140 (140)
Q Consensus 84 ~~~~~G~Tp------LHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~-~~G~TPLHiAAk 140 (140)
..|.+|.|. ||..+|.|++++.-.||..+ ++.|.-+ ..|.||||+||+
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lG---------A~~N~~hpekg~TpLHvAAk 176 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLG---------AQANFFHPEKGNTPLHVAAK 176 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcc---------cccCCCCcccCCchhHHHHh
Confidence 345555565 99999999999999999876 5677654 569999999996
No 98
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=95.68 E-value=0.0041 Score=35.25 Aligned_cols=10 Identities=40% Similarity=0.614 Sum_probs=9.2
Q ss_pred CCCchhhhhc
Q 039158 130 NGYDSFHAAA 139 (140)
Q Consensus 130 ~G~TPLHiAA 139 (140)
+|+||||+||
T Consensus 1 dG~TpLh~A~ 10 (33)
T PF00023_consen 1 DGNTPLHYAA 10 (33)
T ss_dssp TSBBHHHHHH
T ss_pred CcccHHHHHH
Confidence 5999999997
No 99
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.38 E-value=0.016 Score=52.77 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=40.0
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
-.+...+..--|+||+||..|...+|.+||+.+ +++-..|..|.||..+++
T Consensus 421 ~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg---------~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 421 VTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG---------CDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred ccccccccccchHHHHHHhcchHHHHHHHHHhc---------CCchhcccCCCCcccccc
Confidence 344455566789999999999999999999875 344555678999988775
No 100
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=95.26 E-value=0.015 Score=50.19 Aligned_cols=29 Identities=17% Similarity=0.096 Sum_probs=26.4
Q ss_pred CCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 85 PGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 85 ~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
.+..++||||.||.+|+.++.+.|++.+.
T Consensus 75 qhg~~YTpLmFAALSGn~dvcrllldaGa 103 (396)
T KOG1710|consen 75 QHGTLYTPLMFAALSGNQDVCRLLLDAGA 103 (396)
T ss_pred cccccccHHHHHHHcCCchHHHHHHhccC
Confidence 46679999999999999999999999874
No 101
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=94.99 E-value=0.012 Score=55.76 Aligned_cols=35 Identities=20% Similarity=0.091 Sum_probs=25.3
Q ss_pred cccCCC--CCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 79 KKNKDL--PGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 79 ~~~~~~--~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
.+..+. .-..|.|+||+|+..|..-+++.|+..++
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga 680 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGA 680 (785)
T ss_pred hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCC
Confidence 344443 34567888888888888888888888763
No 102
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=94.91 E-value=0.0052 Score=59.17 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=44.8
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhc-CC--------chhHHHHH----------------HhccCCCCCCCc
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQG-CD--------SSEAKELL----------------LKQNQEAKNGYD 133 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~-~~--------~e~v~~LL----------------a~~N~~~~~G~T 133 (140)
.......+..|+|-||++|..|+.-+++.+++. +- +.-|..+. ..+|..|.+|||
T Consensus 564 ~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 564 ENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred hhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCc
Confidence 345566788899999999999999999999995 21 11122221 124444899999
Q ss_pred hhhhhcC
Q 039158 134 SFHAAAK 140 (140)
Q Consensus 134 PLHiAAk 140 (140)
||||||.
T Consensus 644 pL~wAa~ 650 (975)
T KOG0520|consen 644 PLHWAAF 650 (975)
T ss_pred ccchHhh
Confidence 9999983
No 103
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=94.90 E-value=0.026 Score=56.01 Aligned_cols=63 Identities=21% Similarity=0.305 Sum_probs=47.9
Q ss_pred CccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC----------------------chhHHHHHH-hccC--CCCCC
Q 039158 77 GRKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD----------------------SSEAKELLL-KQNQ--EAKNG 131 (140)
Q Consensus 77 ~~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~----------------------~e~v~~LLa-~~N~--~~~~G 131 (140)
+|-.+....|+.|.+||.+||-.||..+|+.||.... .++|..||+ -.|. .+-+.
T Consensus 778 ~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsD 857 (2131)
T KOG4369|consen 778 VRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSD 857 (2131)
T ss_pred HhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhh
Confidence 3457889999999999999999999999999997531 155666664 2333 35568
Q ss_pred Cchhhhhc
Q 039158 132 YDSFHAAA 139 (140)
Q Consensus 132 ~TPLHiAA 139 (140)
||||-+|+
T Consensus 858 ytPlsla~ 865 (2131)
T KOG4369|consen 858 YTPLSLAR 865 (2131)
T ss_pred cCchhhhc
Confidence 99998775
No 104
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=94.51 E-value=0.022 Score=54.04 Aligned_cols=16 Identities=25% Similarity=0.318 Sum_probs=7.7
Q ss_pred hccCCCCCCCchhhhh
Q 039158 123 KQNQEAKNGYDSFHAA 138 (140)
Q Consensus 123 ~~N~~~~~G~TPLHiA 138 (140)
++|..|..|.||||++
T Consensus 681 ~vn~~d~~g~~plh~~ 696 (785)
T KOG0521|consen 681 DVNALDSKGRTPLHHA 696 (785)
T ss_pred cchhhhccCCCcchhh
Confidence 3444445555555543
No 105
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=94.24 E-value=0.038 Score=53.30 Aligned_cols=42 Identities=19% Similarity=0.221 Sum_probs=32.0
Q ss_pred CCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhh
Q 039158 87 KRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHA 137 (140)
Q Consensus 87 ~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHi 137 (140)
..|+||||-|..-||+|++-.||..+.. .-..|+.|.+||..
T Consensus 84 ESG~taLHRaiyyG~idca~lLL~~g~S---------L~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 84 ESGYTALHRAIYYGNIDCASLLLSKGRS---------LRIKDKEGLSPLQF 125 (1267)
T ss_pred cccchHhhHhhhhchHHHHHHHHhcCCc---------eEEecccCCCHHHH
Confidence 4699999999999999999999998731 12224567777654
No 106
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.03 E-value=0.051 Score=51.50 Aligned_cols=56 Identities=14% Similarity=0.059 Sum_probs=45.1
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhcC
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAAK 140 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAAk 140 (140)
++.+++++|-.|+|.||+-+-+=..+.-..+|+.+.. .+...+ |+.|.|||-+||+
T Consensus 262 ~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~----~l~~v~---N~qgLTPLtLAak 317 (782)
T KOG3676|consen 262 HGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN----ALEHVR---NNQGLTPLTLAAK 317 (782)
T ss_pred cCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC----cccccc---ccCCCChHHHHHH
Confidence 5789999999999999999999778888888888753 122223 4689999999985
No 107
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=93.78 E-value=0.04 Score=54.82 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=25.9
Q ss_pred CCCCCCCChhhHHHHHcCCHHHHHHHHhcC
Q 039158 83 DLPGKRSHLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 83 ~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
.++..+-+|+|.+||+.||.|+|++||..+
T Consensus 751 ~~Te~n~~t~LT~acaggh~e~vellv~rg 780 (2131)
T KOG4369|consen 751 PLTEPNIKTNLTSACAGGHREEVELLVVRG 780 (2131)
T ss_pred cccCccccccccccccCccHHHHHHHHHhc
Confidence 345566789999999999999999999875
No 108
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=92.90 E-value=0.073 Score=48.51 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=37.6
Q ss_pred CCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 86 GKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 86 ~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
..++--++.+||+.|++..++.+.-.+ .+.+..|.+..|+||+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g---------~D~~~~DyD~RTaLHvAA 547 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQG---------MDLETKDYDDRTALHVAA 547 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhc---------ccccccccccchhheeec
Confidence 345566899999999999999887665 457888889999999998
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=91.31 E-value=0.17 Score=45.18 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=35.0
Q ss_pred ChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhhc
Q 039158 90 HLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAAA 139 (140)
Q Consensus 90 ~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiAA 139 (140)
+-.|-.|||.|+++.|+.|++.+ -.+|+.|+=.+.||.+|+
T Consensus 37 f~elceacR~GD~d~v~~LVetg---------vnVN~vD~fD~spL~lAs 77 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETG---------VNVNAVDRFDSSPLYLAS 77 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhC---------CCcchhhcccccHHHHHH
Confidence 55799999999999999999976 347777888888998885
No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=89.73 E-value=0.34 Score=43.39 Aligned_cols=35 Identities=17% Similarity=0.111 Sum_probs=32.0
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
.-++|..|+=...||.+|+.+||.++|+.||+.+.
T Consensus 59 gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 59 GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 46788999999999999999999999999999864
No 111
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=83.14 E-value=1.2 Score=40.96 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=31.3
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
.....+.|.+||+|||.|+..|+-.++..+|....
T Consensus 78 ~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 78 GADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHLK 112 (560)
T ss_pred CCCccccccccccHHHHHHHcCCHHHHHHHHHHhH
Confidence 56678899999999999999999999999998753
No 112
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=80.03 E-value=1.4 Score=41.36 Aligned_cols=56 Identities=11% Similarity=0.010 Sum_probs=41.3
Q ss_pred cccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCch
Q 039158 79 KKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDS 134 (140)
Q Consensus 79 ~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TP 134 (140)
--.+.+.|.+|.|+|.+|-..|.-+++..||..+=+++.-.+...+|..-.+|-+|
T Consensus 684 g~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e~~~~~~~~~~~~~~~~~~ 739 (749)
T KOG0705|consen 684 GVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDECGLPAETPSRRISMGPPP 739 (749)
T ss_pred CccceecccCCchhhhhHhhcccHHHHHHHHHcCCCccccccCCCCccccCCCCCC
Confidence 45678899999999999999999999999999864444433444555544444443
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=70.45 E-value=3.7 Score=39.55 Aligned_cols=62 Identities=19% Similarity=0.149 Sum_probs=48.8
Q ss_pred ccccCCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC--------------chhHHHHHHhccCC-------------CCC
Q 039158 78 RKKNKDLPGKRSHLQLHLPARTGNLSRVTEILQGCD--------------SSEAKELLLKQNQE-------------AKN 130 (140)
Q Consensus 78 ~~~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~--------------~e~v~~LLa~~N~~-------------~~~ 130 (140)
.+-+.+-.|.-|.++||+|...-|+++++.|++..- -+.|+.++.+.|.. -..
T Consensus 51 ~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ 130 (822)
T KOG3609|consen 51 SKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTP 130 (822)
T ss_pred cccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCC
Confidence 467888899999999999999999999999998741 13366666666643 245
Q ss_pred CCchhhhhc
Q 039158 131 GYDSFHAAA 139 (140)
Q Consensus 131 G~TPLHiAA 139 (140)
+-|||.+||
T Consensus 131 ditPliLAA 139 (822)
T KOG3609|consen 131 DITPLMLAA 139 (822)
T ss_pred CccHHHHHH
Confidence 789999997
No 114
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=64.67 E-value=5.7 Score=37.59 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=28.8
Q ss_pred CCCCCCCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 82 KDLPGKRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 82 ~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
.+..+..|.|.||-||-.|+..+.++|++.+.
T Consensus 927 ld~~de~get~lhkaa~~~~r~vc~~lvdaga 958 (1004)
T KOG0782|consen 927 LDMADETGETALHKAACQRNRAVCQLLVDAGA 958 (1004)
T ss_pred HHHHhhhhhHHHHHHHHhcchHHHHHHHhcch
Confidence 46778999999999999999999999999863
No 115
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=64.48 E-value=6.1 Score=38.11 Aligned_cols=27 Identities=19% Similarity=0.146 Sum_probs=24.0
Q ss_pred CCCChhhHHHHHcCCHHHHHHHHhcCC
Q 039158 87 KRSHLQLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 87 ~~G~TpLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
..+-|||-+||-.+|.+|++.||..+.
T Consensus 129 t~ditPliLAAh~NnyEil~~Ll~kg~ 155 (822)
T KOG3609|consen 129 TPDITPLMLAAHLNNFEILQCLLTRGH 155 (822)
T ss_pred CCCccHHHHHHHhcchHHHHHHHHcCC
Confidence 346799999999999999999999864
No 116
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=48.33 E-value=29 Score=22.91 Aligned_cols=22 Identities=23% Similarity=0.397 Sum_probs=19.6
Q ss_pred hhHHHHHcCCHHHHHHHHhcCC
Q 039158 92 QLHLPARTGNLSRVTEILQGCD 113 (140)
Q Consensus 92 pLHlAAr~G~l~~Vk~Ll~~~~ 113 (140)
++-.+|..|+.+++..+|....
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y~ 23 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHYE 23 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHHH
Confidence 6778999999999999999864
No 117
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=33.12 E-value=16 Score=30.51 Aligned_cols=47 Identities=15% Similarity=0.104 Sum_probs=33.1
Q ss_pred CCChhhHHHHHcCCHHHHHHHHhcCCchhHHHHHHhccCCCCCCCchhhhh
Q 039158 88 RSHLQLHLPARTGNLSRVTEILQGCDSSEAKELLLKQNQEAKNGYDSFHAA 138 (140)
Q Consensus 88 ~G~TpLHlAAr~G~l~~Vk~Ll~~~~~e~v~~LLa~~N~~~~~G~TPLHiA 138 (140)
.-..|||-|..-|.-|++-+-+-..+. .+-...|..|.+|-.+|.||
T Consensus 221 kTe~~LHk~iki~REDVl~LYfie~da----kiP~~LNd~D~nG~~ALdiA 267 (280)
T KOG4591|consen 221 KTENPLHKAIKIEREDVLFLYFIEMDA----KIPGILNDADHNGALALDIA 267 (280)
T ss_pred CCcchhHHhhhccccceeeehhhhccc----cccccccccCCCchHHHHHH
Confidence 345699999999999988544433221 11234677889999999988
No 118
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=31.82 E-value=51 Score=21.74 Aligned_cols=23 Identities=17% Similarity=0.169 Sum_probs=19.6
Q ss_pred ChhhHHHHHcCCHHHHHHHHhcC
Q 039158 90 HLQLHLPARTGNLSRVTEILQGC 112 (140)
Q Consensus 90 ~TpLHlAAr~G~l~~Vk~Ll~~~ 112 (140)
..-|..|...|+.++++.+++..
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~ 29 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN 29 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh
Confidence 34589999999999999999754
No 119
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=27.69 E-value=72 Score=26.33 Aligned_cols=32 Identities=13% Similarity=0.134 Sum_probs=29.3
Q ss_pred ccCCCCCCCCChhhHHHHHcCCHHHHHHHHhc
Q 039158 80 KNKDLPGKRSHLQLHLPARTGNLSRVTEILQG 111 (140)
Q Consensus 80 ~~~~~~~~~G~TpLHlAAr~G~l~~Vk~Ll~~ 111 (140)
.-+.+.|.+|.+++.+|-+.|+.++|..|.+.
T Consensus 37 a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 37 AFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred ccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 56778899999999999999999999999875
Done!