BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039159
(259 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 146/261 (55%), Gaps = 30/261 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EG+PS+ IRE+S L EL H NI++L V L VFE+ DL LL + +
Sbjct: 41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
+ K+F R + RDLKP N+L++ +G+ +K+A FG
Sbjct: 101 TAKSF--------------LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFG 145
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG-- 186
LA++ + + EV T +Y+AP++L+G +YST +DIW VGCIF EMV+G PLFPG
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 187 -ANSLITLGRIVGKSRK---PSFCKLSLRD-HLTNGFP--------GLEPAGIDLISKML 233
A+ L+ + RI+G P+ +L D + T P GL+ +GIDL+SKML
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 234 GMDPDKRITAAEALQQEYFKD 254
+DP++RITA +AL+ YFK+
Sbjct: 266 KLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 146/261 (55%), Gaps = 30/261 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EG+PS+ IRE+S L EL H NI++L V L VFE+ DL LL + +
Sbjct: 41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
+ K+F R + RDLKP N+L++ +G+ +K+A FG
Sbjct: 101 TAKSF--------------LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFG 145
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG-- 186
LA++ + + EV T +Y+AP++L+G +YST +DIW VGCIF EMV+G PLFPG
Sbjct: 146 LARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVS 205
Query: 187 -ANSLITLGRIVGKSRK---PSFCKLSLRD-HLTNGFP--------GLEPAGIDLISKML 233
A+ L+ + RI+G P+ +L D + T P GL+ +GIDL+SKML
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 234 GMDPDKRITAAEALQQEYFKD 254
+DP++RITA +AL+ YFK+
Sbjct: 266 KLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 160 bits (404), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 30/261 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EG+PS+ IRE+S L EL H NI++L V L VFE+ DL LL + +
Sbjct: 41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
+ K+F R + RDLKP N+L++ +G+ +K+A FG
Sbjct: 101 TAKSF--------------LLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-LKIADFG 145
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG-- 186
LA++ + + E+ T +Y+AP++L+G +YST +DIW VGCIF EMV+G PLFPG
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 187 -ANSLITLGRIVGKSRK---PSFCKLSLRD-HLTNGFP--------GLEPAGIDLISKML 233
A+ L+ + RI+G P+ +L D + T P GL+ +GIDL+SKML
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 234 GMDPDKRITAAEALQQEYFKD 254
+DP++RITA +AL+ YFK+
Sbjct: 266 KLDPNQRITAKQALEHAYFKE 286
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 99
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 100 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 147
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 266
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 267 LHYDPNKRISAKAALAHPFFQDV 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 99
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 100 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 147
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 266
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 267 LHYDPNKRISAKAALAHPFFQDV 289
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLSFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 102 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 149
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 150 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 268
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 269 LHYDPNKRISAKAALAHPFFQDV 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 99
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 100 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 147
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 266
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 267 LHYDPNKRISAKAALAHPFFQDV 289
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMD--ASALTGI 99
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 100 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 147
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 266
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 267 LHYDPNKRISAKAALAHPFFQDV 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 104
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 105 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 152
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 153 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 213 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 271
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 272 LHYDPNKRISAKAALAHPFFQDV 294
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 107
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 108 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 155
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 216 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 274
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 275 LHYDPNKRISAKAALAHPFFQDV 297
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 141/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 50 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 107
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 108 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 155
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 156 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 216 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 274
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 275 LHYDPNKRISAKAALAHPFFQDV 297
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 99
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 100 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 147
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 266
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 267 LHYDPNKRISAKAALAHPFFQDV 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 42 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 99
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 100 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 147
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 148 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 266
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 267 LHYDPNKRISAKAALAHPFFQDV 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 102 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 149
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 268
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 269 LHYDPNKRISAKAALAHPFFQDV 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 103
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 104 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 270
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 271 LHYDPNKRISAKAALAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 102
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 103 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 150
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 269
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 270 LHYDPNKRISAKAALAHPFFQDV 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMD--ASALTGI 103
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 104 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 270
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 271 LHYDPNKRISAKAALAHPFFQDV 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 102 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 149
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 268
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 269 LHYDPNKRISAKAALAHPFFQDV 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 103
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 104 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 270
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 271 LHYDPNKRISAKAALAHPFFQDV 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 157 bits (398), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 47 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 104
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 105 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 152
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 153 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 213 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 271
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 272 LHYDPNKRISAKAALAHPFFQDV 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 102
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 103 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 150
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 269
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 270 LHYDPNKRISAKAALAHPFFQDV 292
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 102
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 103 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPENLLINTEG-AIKLADFG 150
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 269
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 270 LHYDPNKRISAKAALAHPFFQDV 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 102 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPENLLINTEG-AIKLADFG 149
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 268
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 269 LHYDPNKRISAKAALAHPFFQDV 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPENLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 268 LHYDPNKRISAKAALAHPFFQDV 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 157 bits (397), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMD--ASALTGI 103
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 104 PLPLIKSY----LFQLLQGLAFC-------HSHRVLHRDLKPQNLLINTEG-AIKLADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 270
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 271 LHYDPNKRISAKAALAHPFFQDV 293
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 44 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMD--ASALTGI 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 102 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPENLLINTEG-AIKLADFG 149
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 150 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 268
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 269 LHYDPNKRISAKAALAHPFFQDV 291
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMD--ASALTGI 103
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 104 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPENLLINTEG-AIKLADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 270
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 271 LHYDPNKRISAKAALAHPFFQDV 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 45 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMD--ASALTGI 102
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 103 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 150
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 151 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 269
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 270 LHYDPNKRISAKAALAHPFFQDV 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 140/263 (53%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 46 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMD--ASALTGI 103
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 104 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 152 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 270
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A AL +F+DV
Sbjct: 271 LHYDPNKRISAKAALAHPFFQDV 293
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 137/263 (52%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EG+PS+ IRE+S L EL+HPNI+ L+ V L VFE+ DL +L K +
Sbjct: 60 EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + Y L + R + RDLKP N+L++ DG +K+A FG
Sbjct: 120 QIKIY-LYQLLRGVAHCHQH-------------RILHRDLKPQNLLINSDG-ALKLADFG 164
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+AP++L+G +YST+VDIW +GCIF EM++GKPLFPG
Sbjct: 165 LARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 189 SLITLGRIV------GKSRKPSFCKLSLRDHLT----------NGFPGLEPAGIDLISKM 232
L +I P +L L T + PG GIDL+S M
Sbjct: 225 DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNM 284
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A +A+ YFKD+
Sbjct: 285 LCFDPNKRISARDAMNHPYFKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 137/263 (52%), Gaps = 31/263 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EG+PS+ IRE+S L EL+HPNI+ L+ V L VFE+ DL +L K +
Sbjct: 60 EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDS 119
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + Y L + R + RDLKP N+L++ DG +K+A FG
Sbjct: 120 QIKIY-LYQLLRGVAHCHQH-------------RILHRDLKPQNLLINSDG-ALKLADFG 164
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + EV T +Y+AP++L+G +YST+VDIW +GCIF EM++GKPLFPG
Sbjct: 165 LARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 189 SLITLGRIV------GKSRKPSFCKLSLRDHLT----------NGFPGLEPAGIDLISKM 232
L +I P +L L T + PG GIDL+S M
Sbjct: 225 DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNM 284
Query: 233 LGMDPDKRITAAEALQQEYFKDV 255
L DP+KRI+A +A+ YFKD+
Sbjct: 285 LCFDPNKRISARDAMNHPYFKDL 307
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 139/262 (53%), Gaps = 31/262 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPS+ IRE+S L ELNHPNI++L+ V LY VFE+ DL + ++ G
Sbjct: 43 EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD--ASALTGI 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY F L++ R + RDLKP N+L++ +G +K+A FG
Sbjct: 101 PLPLIKSY----LFQLLQGLAFCH-------SHRVLHRDLKPQNLLINTEG-AIKLADFG 148
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+APE+LLG YSTAVDIW +GCIF EMV+ + LFPG +
Sbjct: 149 LARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 189 SLITLGRIVGK----------------SRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+ L RI KPSF K + +D + P L+ G L+S+M
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD-FSKVVPPLDEDGRSLLSQM 267
Query: 233 LGMDPDKRITAAEALQQEYFKD 254
L DP+KRI+A AL +F+D
Sbjct: 268 LHYDPNKRISAKAALAHPFFQD 289
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 130/263 (49%), Gaps = 33/263 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPSS +RE+ L EL H NI+RL V L VFE+ DL DS NG
Sbjct: 42 EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF----DSCNGD 97
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYI-RRDLKPVNILVDLDGKTVKVAGF 127
+V+ F +R + RDLKP N+L++ +G+ +K+A F
Sbjct: 98 LDPE-----------IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE-LKLANF 145
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV-SGKPLFPG 186
GLA++ SAEV T +Y+ P++L G YST++D+W GCIF E+ +G+PLFPG
Sbjct: 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205
Query: 187 ANSLITLGRIV------GKSRKPSFCKL---------SLRDHLTNGFPGLEPAGIDLISK 231
+ L RI + + PS KL L N P L G DL+
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265
Query: 232 MLGMDPDKRITAAEALQQEYFKD 254
+L +P +RI+A EALQ YF D
Sbjct: 266 LLKCNPVQRISAEEALQHPYFSD 288
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 129/263 (49%), Gaps = 33/263 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGVPSS +RE+ L EL H NI+RL V L VFE+ DL DS NG
Sbjct: 42 EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF----DSCNGD 97
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYI-RRDLKPVNILVDLDGKTVKVAGF 127
+V+ F +R + RDLKP N+L++ +G+ +K+A F
Sbjct: 98 LDPE-----------IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE-LKLADF 145
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV-SGKPLFPG 186
GLA++ SAEV T +Y+ P++L G YST++D+W GCIF E+ + +PLFPG
Sbjct: 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPG 205
Query: 187 ANSLITLGRIV------GKSRKPSFCKL---------SLRDHLTNGFPGLEPAGIDLISK 231
+ L RI + + PS KL L N P L G DL+
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265
Query: 232 MLGMDPDKRITAAEALQQEYFKD 254
+L +P +RI+A EALQ YF D
Sbjct: 266 LLKCNPVQRISAEEALQHPYFSD 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 34/271 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
++ EG PS+ IRE+S + EL H NI+RL V L VFE+ NDL KY
Sbjct: 41 DSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLK---KYMDSRT 97
Query: 66 NGYSTK--NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
G + + N F LL + + RDLKP N+L++ G+ +K
Sbjct: 98 VGNTPRGLELNLVKYFQWQLL--------QGLAFCHENKILHRDLKPQNLLINKRGQ-LK 148
Query: 124 VAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPL 183
+ FGLA++ S+EV T +Y+AP++L+G YST++DIW GCI EM++GKPL
Sbjct: 149 LGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPL 208
Query: 184 FPGANSLITLGRIV------GKSRKPSFCKLSLRDHLTNGFPG------LEPAG------ 225
FPG N L I +S PS KL + P L+P
Sbjct: 209 FPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDG 268
Query: 226 --IDLISKMLGMDPDKRITAAEALQQEYFKD 254
+D + +L ++PD R++A +AL +F +
Sbjct: 269 NLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 134/265 (50%), Gaps = 33/265 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
+G+ + +RE+ L EL+HPNII L+ + VF++ DL ++K D+
Sbjct: 53 DGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIK---DNSLVL 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
+ + +Y L T L E+ + RDLKP N+L+D +G +K+A FG
Sbjct: 110 TPSHIKAYMLMTLQGL--EYLHQHW---------ILHRDLKPNNLLLDENG-VLKLADFG 157
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LAKS + +V T +Y+APELL G Y VD+W VGCI E++ P PG +
Sbjct: 158 LAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS 217
Query: 189 SLITLGRIV------GKSRKPSFCKLSLRDHLT-NGFPGL------EPAGIDLISKMLGM 235
L L RI + + P C SL D++T FPG+ AG DL+ + G+
Sbjct: 218 DLDQLTRIFETLGTPTEEQWPDMC--SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGL 275
Query: 236 ---DPDKRITAAEALQQEYFKDVPG 257
+P RITA +AL+ +YF + PG
Sbjct: 276 FLFNPCARITATQALKMKYFSNRPG 300
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 126/265 (47%), Gaps = 37/265 (13%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLA-YLLKYPKDSMNG 67
EGVP + IREVS L EL H NII L V L+ +FEY NDL Y+ K P SM
Sbjct: 74 EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMR- 132
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT----VK 123
K+F Y L R + RDLKP N+L+ + + +K
Sbjct: 133 -VIKSF-LYQLINGVNFCH-------------SRRCLHRDLKPQNLLLSVSDASETPVLK 177
Query: 124 VAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPL 183
+ FGLA++ + + E+ T +Y+ PE+LLG YST+VDIW + CI+ EM+ PL
Sbjct: 178 IGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL 237
Query: 184 FPGANSLITLGRI---VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLI----------- 229
FPG + + L +I +G ++ ++ FP + +
Sbjct: 238 FPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLD 297
Query: 230 --SKMLGMDPDKRITAAEALQQEYF 252
+ ML MDP KRI+A AL+ YF
Sbjct: 298 LLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 132/271 (48%), Gaps = 39/271 (14%)
Query: 4 IHNTMEGVPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDL- 54
+ N EG+P S +REV+ L L HPN++RLM V + + I + VFE+ DL
Sbjct: 39 VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLR 98
Query: 55 AYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL 114
YL K P + + K+ L FL +F + RDLKP NIL
Sbjct: 99 TYLDKAPPPGLPAETIKD-----LMRQFLRGLDFL---------HANCIVHRDLKPENIL 144
Query: 115 VDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIF 174
V G TVK+A FGLA+ +Y+Y+ + V T +Y+APE+LL Y+T VD+W VGCIF
Sbjct: 145 V-TSGGTVKLADFGLAR-IYSYQMALAPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIF 201
Query: 175 GEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNG-------------FPGL 221
EM KPLF G + LG+I P L G P +
Sbjct: 202 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEM 261
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
E +G L+ +ML +P KRI+A ALQ Y
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 131/271 (48%), Gaps = 39/271 (14%)
Query: 4 IHNTMEGVPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDL- 54
+ N EG+P S +REV+ L L HPN++RLM V + + I + VFE+ DL
Sbjct: 39 VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLR 98
Query: 55 AYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL 114
YL K P + + K+ L FL +F + RDLKP NIL
Sbjct: 99 TYLDKAPPPGLPAETIKD-----LMRQFLRGLDFL---------HANCIVHRDLKPENIL 144
Query: 115 VDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIF 174
V G TVK+A FGLA+ +Y+Y+ V T +Y+APE+LL Y+T VD+W VGCIF
Sbjct: 145 V-TSGGTVKLADFGLAR-IYSYQMALDPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIF 201
Query: 175 GEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNG-------------FPGL 221
EM KPLF G + LG+I P L G P +
Sbjct: 202 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEM 261
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
E +G L+ +ML +P KRI+A ALQ Y
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 34/261 (13%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK-YPKDSMNGYS 69
V +RE+ L +L H N++ L+ V + Y VFE+ + + L+ +P NG
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP----NGLD 122
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y LF I RD+KP NILV G VK+ FG
Sbjct: 123 YQVVQKY-LFQII----------NGIGFCHSHNIIHRDIKPENILVSQSG-VVKLCDFGF 170
Query: 130 AKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
A++L A EV T +Y+APELL+G ++Y AVD+W +GC+ EM G+PLFPG +
Sbjct: 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 190 -------LITLGRIVGK-----SRKPSFCKLSL-----RDHLTNGFPGLEPAGIDLISKM 232
++ LG ++ + ++ P F + L R+ L +P L IDL K
Sbjct: 231 IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKC 290
Query: 233 LGMDPDKRITAAEALQQEYFK 253
L +DPDKR AE L ++F+
Sbjct: 291 LHIDPDKRPFCAELLHHDFFQ 311
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 138/269 (51%), Gaps = 39/269 (14%)
Query: 9 EGVPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDLA-YLLK 59
EG+P S IREV+ L L HPN++RL V + + L VFE+ DL YL K
Sbjct: 52 EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Query: 60 YPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
P+ + + K+ F L+ R + RDLKP NILV G
Sbjct: 112 VPEPGVPTETIKDM-------MFQLLRGLDFL-------HSHRVVHRDLKPQNILVTSSG 157
Query: 120 KTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ +K+A FGLA+ +Y+++ ++ V T +Y+APE+LL Y+T VD+W VGCIF EM
Sbjct: 158 Q-IKLADFGLAR-IYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIFAEMFR 214
Query: 180 GKPLFPGANSLITLGRIV------GKSRKPSFCKLSLRD-HLTNGFP------GLEPAGI 226
KPLF G++ + LG+I+ G+ P L + H + P ++ G
Sbjct: 215 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGK 274
Query: 227 DLISKMLGMDPDKRITAAEALQQEYFKDV 255
DL+ K L +P KRI+A AL YF+D+
Sbjct: 275 DLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 139/274 (50%), Gaps = 39/274 (14%)
Query: 4 IHNTMEGVPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDLA 55
+ EG+P S IREV+ L L HPN++RL V + + L VFE+ DL
Sbjct: 47 VQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT 106
Query: 56 -YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL 114
YL K P+ + + K+ + L + R + RDLKP NIL
Sbjct: 107 TYLDKVPEPGVPTETIKDM-MFQLLRGLDFLH-------------SHRVVHRDLKPQNIL 152
Query: 115 VDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIF 174
V G+ +K+A FGLA+ +Y+++ ++ V T +Y+APE+LL Y+T VD+W VGCIF
Sbjct: 153 VTSSGQ-IKLADFGLAR-IYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIF 209
Query: 175 GEMVSGKPLFPGANSLITLGRIV------GKSRKPSFCKLSLRD-HLTNGFP------GL 221
EM KPLF G++ + LG+I+ G+ P L + H + P +
Sbjct: 210 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI 269
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ G DL+ K L +P KRI+A AL YF+D+
Sbjct: 270 DELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 131/271 (48%), Gaps = 39/271 (14%)
Query: 4 IHNTMEGVPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDL- 54
+ N EG+P S +REV+ L L HPN++RLM V + + I + VFE+ DL
Sbjct: 39 VPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLR 98
Query: 55 AYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL 114
YL K P + + K+ L FL +F + RDLKP NIL
Sbjct: 99 TYLDKAPPPGLPAETIKD-----LMRQFLRGLDFL---------HANCIVHRDLKPENIL 144
Query: 115 VDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIF 174
V G TVK+A FGLA+ +Y+Y+ V T +Y+APE+LL Y+T VD+W VGCIF
Sbjct: 145 V-TSGGTVKLADFGLAR-IYSYQMALFPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIF 201
Query: 175 GEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNG-------------FPGL 221
EM KPLF G + LG+I P L G P +
Sbjct: 202 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEM 261
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
E +G L+ +ML +P KRI+A ALQ Y
Sbjct: 262 EESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 131/260 (50%), Gaps = 31/260 (11%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EG P + IREVS L +L H NI+ L + L VFEY DL +Y D N
Sbjct: 41 EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLK---QYLDDCGN-- 95
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
N ++ LF LL + + RDLKP N+L++ G+ +K+A FG
Sbjct: 96 -IINMHNVKLFLFQLL--------RGLAYCHRQKVLHRDLKPQNLLINERGE-LKLADFG 145
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ EV T +Y+ P++LLG +YST +D+W VGCIF EM +G+PLFPG+
Sbjct: 146 LARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205
Query: 189 ---SLITLGRIVGKSRKPSFCKLSLRDH-------------LTNGFPGLEPAGIDLISKM 232
L + RI+G + ++ + + L + P L+ G DL++K+
Sbjct: 206 VEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKL 265
Query: 233 LGMDPDKRITAAEALQQEYF 252
L + RI+A +A++ +F
Sbjct: 266 LQFEGRNRISAEDAMKHPFF 285
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 137/272 (50%), Gaps = 39/272 (14%)
Query: 4 IHNTMEGVPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDLA 55
+ EG+P S IREV+ L L HPN++RL V + + L VFE+ DL
Sbjct: 47 VQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLT 106
Query: 56 -YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL 114
YL K P+ + + K+ + L + R + RDLKP NIL
Sbjct: 107 TYLDKVPEPGVPTETIKDM-MFQLLRGLDFLH-------------SHRVVHRDLKPQNIL 152
Query: 115 VDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIF 174
V G+ +K+A FGLA+ +Y+++ ++ V T +Y+APE+LL Y+T VD+W VGCIF
Sbjct: 153 VTSSGQ-IKLADFGLAR-IYSFQMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGCIF 209
Query: 175 GEMVSGKPLFPGANSLITLGRIV------GKSRKPSFCKLSLRD-HLTNGFP------GL 221
EM KPLF G++ + LG+I+ G+ P L + H + P +
Sbjct: 210 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDI 269
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ G DL+ K L +P KRI+A AL YF+
Sbjct: 270 DELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 128/264 (48%), Gaps = 39/264 (14%)
Query: 11 VPSSMIREVSCLMELN---HPNIIRLMRVAS-----QGIYLYPVFEYQVNDL-AYLLKYP 61
+P S +REV+ L L HPN++RLM V + + I + VFE+ DL YL K P
Sbjct: 54 LPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAP 113
Query: 62 KDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT 121
+ + K+ L FL +F + RDLKP NILV G T
Sbjct: 114 PPGLPAETIKD-----LMRQFLRGLDFL---------HANCIVHRDLKPENILVT-SGGT 158
Query: 122 VKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
VK+A FGLA+ +Y+Y+ + V T +Y+APE+LL Y+T VD+W VGCIF EM K
Sbjct: 159 VKLADFGLAR-IYSYQMALTPVVVTLWYRAPEVLLQS-TYATPVDMWSVGCIFAEMFRRK 216
Query: 182 PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNG-------------FPGLEPAGIDL 228
PLF G + LG+I P L G P +E +G L
Sbjct: 217 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQL 276
Query: 229 ISKMLGMDPDKRITAAEALQQEYF 252
+ +ML +P KRI+A ALQ Y
Sbjct: 277 LLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 94/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ GFGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILGFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 114 bits (284), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 153 IHRDLKPSNLAVNEDSE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 269 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 149 IHRDLKPSNLAVNEDSE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGXVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 153 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 269 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDXE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 153 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 269 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 153 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 209 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 269 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 152 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 152 IHRDLKPSNLAVNEDXE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 152 IHRDLKPSNLAVNEDXE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 158 IHRDLKPSNLAVNEDXE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 214 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 274 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 154 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 176 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNM 231
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGA---NSLITLGRIVGK------SRKPSFCKLSL---- 210
VDIW VGCI E+++G+ LFPG N L + R+ G SR PS +
Sbjct: 232 TVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSL 291
Query: 211 ----RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ + + F G P +DL+ KML +D DKRITA+EAL YF
Sbjct: 292 PQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 154 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 152 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 207
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 208 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 267
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 268 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 146 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 201
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 202 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 261
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 262 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 154 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 157 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 212
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 213 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 272
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 273 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 154 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---ADEMTGYVATRWYRAPEIMLNWMHYNQ 209
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 210 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 269
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 149 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +++ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 153 IHRDLKPSNVAVNEDSE-LRILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRI---VGKSRKPSFCKLSL---------- 210
VDIW VGCI E++ GK LFPG++ + L RI VG K+S
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
Query: 211 ----RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ L++ F G P IDL+ +ML +D D+R++AAEAL YF
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +++ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 153 IHRDLKPSNVAVNEDSE-LRILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQ 208
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRI---VGKSRKPSFCKLSL---------- 210
VDIW VGCI E++ GK LFPG++ + L RI VG K+S
Sbjct: 209 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 268
Query: 211 ----RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ L++ F G P IDL+ +ML +D D+R++AAEAL YF
Sbjct: 269 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 143 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 259 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 143 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 259 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 149 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 144 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 200 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 260 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 144 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 199
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 200 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 259
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 260 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 159 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 275 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 159 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 275 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 143 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 198
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 259 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 159 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 214
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 215 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 274
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 275 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNAMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 158 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 213
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 214 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 273
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 274 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 145 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 201 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 260
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 261 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 149 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 204
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 205 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 264
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 265 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 170 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 225
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 226 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 286 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 166 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 222 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 282 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 167 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 283 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 167 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 222
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 283 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 166 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 221
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 222 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 281
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 282 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E V T +Y+APE++L + Y+
Sbjct: 167 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMXGXVATRWYRAPEIMLNWMHYNQ 222
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 223 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 282
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 283 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 143 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMAGFVATRWYRAPEIMLNWMHYNQ 198
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 199 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 258
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 259 AQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGLA+ E V T +Y+APE++L + Y+
Sbjct: 170 IHRDLKPSNLAVNEDCE-LKILDFGLARHT---DDEMXGYVATRWYRAPEIMLNWMHYNQ 225
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 226 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 285
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 286 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +++ FGLA+ E + V T +Y+APE++L + Y+
Sbjct: 145 IHRDLKPSNVAVNEDCE-LRILDFGLARQA---DEEMTGYVATRWYRAPEIMLNWMHYNQ 200
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRI---VGKSRKPSFCKLSL---------- 210
VDIW VGCI E++ GK LFPG++ + L RI VG K+S
Sbjct: 201 TVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSL 260
Query: 211 ----RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ L++ F G P IDL+ +ML +D D+R++AAEAL YF
Sbjct: 261 PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ FGL + E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDSE-LKILDFGLCRHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ +GLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDYGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 121/266 (45%), Gaps = 55/266 (20%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYL------YPVFEYQVNDLAYLLKYPKDSMNGYST 70
RE+ L + H N+I L+ V + L Y V + DL L+K+ K G
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---LGEDR 129
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
F Y + G RYI RDLKP N+ V+ D + +K+
Sbjct: 130 IQFLVYQMLK-------------------GLRYIHAAGIIHRDLKPGNLAVNEDCE-LKI 169
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
FGLA+ E V T +Y+APE++L + Y+ VDIW VGCI EM++GK LF
Sbjct: 170 LDFGLARQA---DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
Query: 185 PGANSLITLGRIVGKSRKP--SFCKLSLRDHLTN---GFPGLE------------PAGID 227
G++ L L I+ + P F + D N G P LE P ++
Sbjct: 227 KGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVN 286
Query: 228 LISKMLGMDPDKRITAAEALQQEYFK 253
L+ KML +D ++R+TA EAL YF+
Sbjct: 287 LLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ F LA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDFYLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ GLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDAGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ GLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDRGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 21/166 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+ V+ D + +K+ GLA+ E + V T +Y+APE++L + Y+
Sbjct: 147 IHRDLKPSNLAVNEDCE-LKILDGGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQ 202
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLG---RIVGKSRKPSFCKL---SLRDHL--- 214
VDIW VGCI E+++G+ LFPG + + L R+VG K+ S R+++
Sbjct: 203 TVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
Query: 215 --------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
N F G P +DL+ KML +D DKRITAA+AL YF
Sbjct: 263 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 124/259 (47%), Gaps = 36/259 (13%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+RE+ L +L HPN++ L+ V + L+ VFEY + + + L + + + K+
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW 109
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRY--IRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
+L F ++ I RD+KP NIL+ +K+ FG A+ L
Sbjct: 110 QTL----------------QAVNFCHKHNCIHRDVKPENILI-TKHSVIKLCDFGFARLL 152
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL--- 190
EV T +Y++PELL+G +Y VD+W +GC+F E++SG PL+PG + +
Sbjct: 153 TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL 212
Query: 191 ----ITLGRIVGKSRK-----PSFCKLSLRD-----HLTNGFPGLEPAGIDLISKMLGMD 236
TLG ++ + ++ F + + D L FP + + L+ L MD
Sbjct: 213 YLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMD 272
Query: 237 PDKRITAAEALQQEYFKDV 255
P +R+T + L YF+++
Sbjct: 273 PTERLTCEQLLHHPYFENI 291
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 89/166 (53%), Gaps = 22/166 (13%)
Query: 105 RRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTA 164
RD+KP N+LV+ T+K+ FG AK L + S A + + +Y+APEL+LG EY+ +
Sbjct: 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAXICSRFYRAPELMLGATEYTPS 222
Query: 165 VDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVG------------------KSRKPSFC 206
+D+W +GC+FGE++ GKPLF G S+ L RI+ + R P+
Sbjct: 223 IDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLK 282
Query: 207 KLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
R L G P L IDL+ ++L +PD RI EA+ +F
Sbjct: 283 AKDWRKILPEGTPSL---AIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 21/167 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP N+ V+ D + +K+ FGLA+ A E + V T +Y+APE++L + Y+
Sbjct: 148 VHRDLKPGNLAVNEDCE-LKILDFGLARHADA---EMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV---------------GKSRKPSFCKL 208
VDIW VGCI EM++GK LF G + L L +I+ K+ K L
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL 263
Query: 209 --SLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ R T FP P DL+ KML +D DKR+TAA+AL +F+
Sbjct: 264 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 21/167 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP N+ V+ D + +K+ FGLA+ A E + V T +Y+APE++L + Y+
Sbjct: 166 VHRDLKPGNLAVNEDCE-LKILDFGLARHADA---EMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV---------------GKSRKPSFCKL 208
VDIW VGCI EM++GK LF G + L L +I+ K+ K L
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL 281
Query: 209 --SLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ R T FP P DL+ KML +D DKR+TAA+AL +F+
Sbjct: 282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 53/291 (18%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRV----ASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
G+ S RE++ L EL HPN+I L +V A + ++L +F+Y +DL +++K+ + S
Sbjct: 60 GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL--LFDYAEHDLWHIIKFHRAS- 116
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYI-RRDLKPVNILVDLDGKT--- 121
N + +V+ ++ RDLKP NILV +G
Sbjct: 117 ------KANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR 170
Query: 122 VKVAGFGLAK---SLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
VK+A G A+ S + V T +Y+APELLLG Y+ A+DIW +GCIF E++
Sbjct: 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 179 SGKPLFPGANSLI---------TLGRI------------------------VGKSRKPSF 205
+ +P+F I L RI + R+ ++
Sbjct: 231 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTY 290
Query: 206 CKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVP 256
SL ++ + L+ K+L MDP KRIT+ +A+Q YF + P
Sbjct: 291 TNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 50/271 (18%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIY-----LYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L H NII + + + +Y + E DL ++ S S
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-----STQMLSD 111
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ Y ++ T V+ G+ I RDLKP N+L++ + +KV FGLA
Sbjct: 112 DHIQ-YFIYQTLRAVK----------VLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLA 159
Query: 131 KSLYAYKGESSAEVG----------THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG 180
+ + ++S G T +Y+APE++L +YS A+D+W GCI E+
Sbjct: 160 RIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
Query: 181 KPLFPGAN---SLITLGRIVG--KSRKPSFCKLSLRDH-------------LTNGFPGLE 222
+P+FPG + L+ + I+G S C S R L FP +
Sbjct: 220 RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN 279
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
P GIDL+ +ML DP KRITA EAL+ Y +
Sbjct: 280 PKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 50/271 (18%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIY-----LYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L H NII + + + +Y + E DL ++ +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS------TQMLS 110
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ Y ++ T V+ G+ I RDLKP N+L++ + +KV FGLA
Sbjct: 111 DDHIQYFIYQTLRAVK----------VLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLA 159
Query: 131 KSLYAYKGESSAEVG----------THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG 180
+ + ++S G T +Y+APE++L +YS A+D+W GCI E+
Sbjct: 160 RIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
Query: 181 KPLFPGAN---SLITLGRIVG--KSRKPSFCKLSLRDH-------------LTNGFPGLE 222
+P+FPG + L+ + I+G S C S R L FP +
Sbjct: 220 RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN 279
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
P GIDL+ +ML DP KRITA EAL+ Y +
Sbjct: 280 PKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 50/271 (18%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIY-----LYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L H NII + + + +Y + E DL ++ +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS------TQMLS 110
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ Y ++ T V+ G+ I RDLKP N+L++ + +KV FGLA
Sbjct: 111 DDHIQYFIYQTLRAVK----------VLHGSNVIHRDLKPSNLLINSNCD-LKVCDFGLA 159
Query: 131 KSLYAYKGESSAEVG----------THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG 180
+ + ++S G T +Y+APE++L +YS A+D+W GCI E+
Sbjct: 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
Query: 181 KPLFPGAN---SLITLGRIVG--KSRKPSFCKLSLRDH-------------LTNGFPGLE 222
+P+FPG + L+ + I+G S C S R L FP +
Sbjct: 220 RPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN 279
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
P GIDL+ +ML DP KRITA EAL+ Y +
Sbjct: 280 PKGIDLLQRMLVFDPAKRITAKEALEHPYLQ 310
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 58/271 (21%)
Query: 16 IREVSCLMELNHPNIIRLMRV-------ASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
+RE+ L+ H N+I + + A + +Y+ V + DL LLK
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYI--VQDLMETDLYKLLK--------- 137
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTV 122
S + N + + + ++ G +YI RDLKP N+L++ +
Sbjct: 138 SQQLSNDHICYFLYQILR-------------GLKYIHSANVLHRDLKPSNLLINTTCD-L 183
Query: 123 KVAGFGLAK---SLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S
Sbjct: 184 KICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
Query: 180 GKPLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHLTN-----------GFPGLE 222
+P+FPG + L L I+G PS + R++L + FP +
Sbjct: 244 NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSD 303
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ +ML +P+KRIT EAL Y +
Sbjct: 304 SKALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 18/166 (10%)
Query: 106 RDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTA 164
RD+KP N+L+D +K+ FG AK L A GE + + + + YY+APEL+ G Y+T
Sbjct: 165 RDIKPQNLLLDPPSGVLKLIDFGSAKILIA--GEPNVSXICSRYYRAPELIFGATNYTTN 222
Query: 165 VDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLR--DHLTNGFPGLE 222
+DIW GC+ E++ G+PLFPG + + L I+ PS ++ +++ + FP +
Sbjct: 223 IDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIR 282
Query: 223 PA-------------GIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
P IDLIS++L P R+TA EAL +F ++
Sbjct: 283 PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDX-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 122
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 123 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNT-TXDLKI 165
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 226 PIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSK 285
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 122
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 123 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNT-TXDLKI 165
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 226 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 285
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 127 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNT-TXDLKI 169
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 230 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 289
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 127 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNT-TXDLKI 169
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 230 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 289
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES----SAEVGTHYYKAPELL 155
+ I RDLKP N+LV+ + +K+ FG+A+ L E + V T +Y+APEL+
Sbjct: 176 SAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 156 LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRI--------------VGKSR 201
L L EY+ A+D+W VGCIFGEM++ + LFPG N + L I VG R
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 294
Query: 202 KPSFCK-LSLRDHL--TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
++ + L R + +PG + + L+ +ML +P RI+AA AL+ +
Sbjct: 295 VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLXQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDX-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLXQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLXGIKHL----------HSAGIIHRDLKPSNIVVKSDX-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 122
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 123 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 165
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 226 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 285
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 122
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 123 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNT-TXDLKI 165
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 166 XDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 226 PIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSK 285
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 127 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 169
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 230 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 289
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 21/170 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLE 160
+ RDLKP N+L++ +K+ FGLA+ + + G + V T +Y+APE++L
Sbjct: 166 LHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL 214
Y+ ++DIW VGCI EM+S +P+FPG + L L I+G PS L R++L
Sbjct: 225 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 284
Query: 215 -----------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
FP + +DL+ KML +P KRI +AL Y +
Sbjct: 285 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 71 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 124
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 125 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 167
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 228 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 287
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 288 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 127
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 128 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 170
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 171 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 231 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 290
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 291 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 128
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 129 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 171
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 172 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 232 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 291
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 292 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 119
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 120 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 162
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 163 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 223 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 282
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 283 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 127 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 169
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 230 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 289
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 77 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 130
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 131 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 173
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 174 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 234 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 293
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 294 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 122
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 123 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 165
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 226 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 285
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 286 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 120
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 121 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 163
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 164 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 224 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 283
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 284 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 22/174 (12%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES----SAEVGTHYYKAPELL 155
+ I RDLKP N+LV+ + +K+ FG+A+ L E + V T +Y+APEL+
Sbjct: 177 SAQVIHRDLKPSNLLVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 156 LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRI--------------VGKSR 201
L L EY+ A+D+W VGCIFGEM++ + LFPG N + L I VG R
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 295
Query: 202 KPSFCK-LSLRDHL--TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
++ + L R + +PG + + L+ +ML +P RI+AA AL+ +
Sbjct: 296 VRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 121/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 89 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 142
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 143 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 185
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 246 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 305
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 306 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 127 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTC-DLKI 169
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 170 CDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 230 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 289
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 290 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 120/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 127
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 128 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTC-DLKI 170
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 171 CDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G PS L R++L FP +
Sbjct: 231 PIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 290
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 291 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 21/170 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLE 160
+ RDLKP N+L++ +K+ FGLA+ + + G + V T +Y+APE++L
Sbjct: 150 LHRDLKPSNLLLNTTC-DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL 214
Y+ ++DIW VGCI EM+S +P+FPG + L L I+G PS L R++L
Sbjct: 209 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 268
Query: 215 -----------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
FP + +DL+ KML +P KRI +AL Y +
Sbjct: 269 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 21/169 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLE 160
+ RDLKP N+L++ +K+ FGLA+ + + G + V T +Y+APE++L
Sbjct: 148 LHRDLKPSNLLLNTTSD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS----FCKLSL--RDHL 214
Y+ ++DIW VGCI EM+S +P+FPG + L L I+G PS C ++L R++L
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYL 266
Query: 215 -----------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
FP + +DL+ KML +P KRI +AL Y
Sbjct: 267 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKLS---LRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 21/169 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLE 160
+ RDLKP N+L++ +K+ FGLA+ + + G + V T +Y+APE++L
Sbjct: 148 LHRDLKPSNLLLNTTCD-LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL 214
Y+ ++DIW VGCI EM+S +P+FPG + L L I+G PS L R++L
Sbjct: 207 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYL 266
Query: 215 -----------TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
FP + +DL+ KML +P KRI +AL Y
Sbjct: 267 LSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 127
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 128 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 170
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 171 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 225
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 226 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 285
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 286 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 121
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 122 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 164
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 165 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 129
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 130 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 172
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 173 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 287
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 288 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 35/259 (13%)
Query: 22 LMELNHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGYSTKNFNSYSLF 79
L L+HPNI++L Y Y + E D L +++Y D+++ +N+ +
Sbjct: 73 LAVLHHPNIVQLQS------YFYTLGERDRRDIYLNVVMEYVPDTLHR-CCRNYYRRQVA 125
Query: 80 TTFLLVEEFXXXXXXXXXXF---GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAY 136
+L++ F RD+KP N+LV+ T+K+ FG AK L
Sbjct: 126 PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
Query: 137 KGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS---LITL 193
+ + A + + YY+APEL+ G Y+TAVDIW VGCIF EM+ G+P+F G NS L +
Sbjct: 186 E-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
Query: 194 GRIVG-------KSRKPSFCKLSLRDHLTNGFP--------GLEPA--GIDLISKMLGMD 236
R++G + PS + L + + G P L+ A DL+S +L
Sbjct: 245 VRVLGCPSREVLRKLNPSHTDVDLYN--SKGIPWSNVFSDHSLKDAKEAYDLLSALLQYL 302
Query: 237 PDKRITAAEALQQEYFKDV 255
P++R+ EAL YF ++
Sbjct: 303 PEERMKPYEALCHPYFDEL 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 122
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 123 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 165
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 166 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 280
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 281 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 122
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 123 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 165
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 166 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 280
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 281 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKLS---LRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 129
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 130 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 172
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 173 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 287
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 288 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 166
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 167 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 209
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 210 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 324
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLXQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLXGIKHL----------HSAGIIHRDLKPSNIVVKSDX-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIQMELDHERM- 166
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 167 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 209
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 210 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 324
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +YL V E +L +++ D
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLXQVIQMELDHERM- 121
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 122 ------SYLLYQMLXGIKHL----------HSAGIIHRDLKPSNIVVKSD-XTLKILDFG 164
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 165 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTN-------GFPGLEPAGI------- 226
G + + +++ + + P F K ++R+++ N FP L P +
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 227 ---------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DP KRI+ +ALQ Y
Sbjct: 280 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 122/276 (44%), Gaps = 61/276 (22%)
Query: 16 IREVSCLMELNHPNIIRLMRVA--------------SQGIYLYPVFEYQVNDLAYLLKYP 61
+RE+ + L+H NI+++ + ++ +Y V EY DLA +L+
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG 115
Query: 62 KDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILV 115
L+EE G +YI RDLKP N+ +
Sbjct: 116 P---------------------LLEEHARLFMYQLLR-GLKYIHSANVLHRDLKPANLFI 153
Query: 116 DLDGKTVKVAGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGC 172
+ + +K+ FGLA+ + Y++KG S + T +Y++P LLL Y+ A+D+W GC
Sbjct: 154 NTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGC 213
Query: 173 IFGEMVSGKPLFPGANSLITLGRIV---------GKSRKPSFCKLSLRDH-------LTN 216
IF EM++GK LF GA+ L + I+ + S + +R+ LT
Sbjct: 214 IFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQ 273
Query: 217 GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
PG+ +D + ++L P R+TA EAL Y
Sbjct: 274 LLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 63 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 122
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 123 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 168
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 169 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 226
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 227 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 286
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 287 LLEYTPTARLTPLEACAHSFFDEL 310
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 81 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 140
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 141 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 186
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 187 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 244
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 245 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 304
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 305 LLEYTPTARLTPLEACAHSFFDEL 328
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 133
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 134 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 179
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 180 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 238 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 297
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 298 LLEYTPTARLTPLEACAHSFFDEL 321
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 70 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 129
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 130 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 175
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 176 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 233
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 234 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 293
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 294 LLEYTPTARLTPLEACAHSFFDEL 317
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 66 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 125
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 126 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 171
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 172 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 229
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 230 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 289
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 290 LLEYTPTARLTPLEACAHSFFDEL 313
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 74 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 133
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 134 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 179
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 180 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 238 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 297
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 298 LLEYTPTARLTPLEACAHSFFDEL 321
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 128/264 (48%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV-ASQG-----IYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL S G +YL V +Y V +A K ++
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPV 121
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 122 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 168 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 67 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 126
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 127 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 172
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 173 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 230
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 231 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 290
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 291 LLEYTPTARLTPLEACAHSFFDEL 314
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 75 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 134
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 135 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 180
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 181 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 238
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 239 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 298
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 299 LLEYTPTARLTPLEACAHSFFDEL 322
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 90 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 149
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 150 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 195
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 196 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 253
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 254 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 313
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 314 LLEYTPTARLTPLEACAHSFFDEL 337
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 131/292 (44%), Gaps = 74/292 (25%)
Query: 17 REVSCLMELN-HPNIIRLMRV--ASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
RE+ L EL+ H NI+ L+ V A +Y VF+Y DL +++ ++ K +
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA---NILEPVHKQY 113
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
Y L + + RD+KP NIL++ + VKVA FGL++S
Sbjct: 114 VVYQLIKVIKYLH-------------SGGLLHRDMKPSNILLNAECH-VKVADFGLSRSF 159
Query: 134 YAYK----------GESSAE-----------VGTHYYKAPELLLGLLEYSTAVDIWPVGC 172
+ E++ V T +Y+APE+LLG +Y+ +D+W +GC
Sbjct: 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGC 219
Query: 173 IFGEMVSGKPLFPGANSLITLGRIVGKSRKPS----------FCKLSL------------ 210
I GE++ GKP+FPG++++ L RI+G PS F K +
Sbjct: 220 ILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQS 279
Query: 211 --RDHLT---------NGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
RD T N +DL+ K+L +P+KRI+A +AL+ +
Sbjct: 280 NKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPF 331
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 155
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 156 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 201
Query: 128 GLAKSLYAYKGESS-AEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 202 GSAKQLV--RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 260 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 319
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 320 LLEYTPTARLTPLEACAHSFFDEL 343
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 54/269 (20%)
Query: 16 IREVSCLMELNHPNII---RLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+RE+ L+ H NII ++R + Q +Y V + DL LLK + +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK------TQHLS 120
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVKV 124
+ Y L+ G +YI RDLKP N+L++ +K+
Sbjct: 121 NDHICYFLYQILR----------------GLKYIHSANVLHRDLKPSNLLLNTTCD-LKI 163
Query: 125 AGFGLAKSL---YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
FGLA+ + + G + V T +Y+APE++L Y+ ++DIW VGCI EM+S +
Sbjct: 164 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Query: 182 PLFPGANSLITLGRIVGKSRKPS------FCKLSLRDHL-----------TNGFPGLEPA 224
P+FPG + L L I+G P L R++L FP +
Sbjct: 224 PIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSK 283
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL+ KML +P KRI +AL Y +
Sbjct: 284 ALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 96 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 155
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 156 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 201
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 202 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 260 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 319
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 320 LLEYTPTARLTPLEACAHSFFDEL 343
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 141 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 200
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 201 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 246
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 247 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 304
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 305 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 364
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 365 LLEYTPTARLTPLEACAHSFFDEL 388
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 98 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 157
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 158 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 203
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 204 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 261
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 262 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 321
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 322 LLEYTPTARLTPLEACAHSFFDEL 345
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 41/264 (15%)
Query: 17 REVSCLMELNHPNIIRLMRV------ASQGIYLYPVFEY---QVNDLAYLLKYPKDSMNG 67
RE+ + +L+H NI+RL +YL V +Y V +A K ++
Sbjct: 100 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV 159
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
K + Y LF + + F RD+KP N+L+D D +K+ F
Sbjct: 160 IYVKLY-MYQLFRSLAYIHSFGI-------------CHRDIKPQNLLLDPDTAVLKLCDF 205
Query: 128 GLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP- 185
G AK L +GE + + + YY+APEL+ G +Y++++D+W GC+ E++ G+P+FP
Sbjct: 206 GSAKQLV--RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 263
Query: 186 --GANSLITLGRIVG-------KSRKPSFCKL---SLRDH-LTNGF-PGLEPAGIDLISK 231
G + L+ + +++G + P++ + ++ H T F P P I L S+
Sbjct: 264 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 323
Query: 232 MLGMDPDKRITAAEALQQEYFKDV 255
+L P R+T EA +F ++
Sbjct: 324 LLEYTPTARLTPLEACAHSFFDEL 347
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 43/264 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRV-------ASQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
++RE+ L +HPNI+ L + A +YL V E DLA ++ + ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL--VTELMRTDLAQVIHDQRIVISP 133
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ F + L +L E + RDL P NIL+ D + + F
Sbjct: 134 QHIQYFMYHILLGLHVLHE--------------AGVVHRDLHPGNILL-ADNNDITICDF 178
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
LA+ A + V +Y+APEL++ ++ VD+W GC+ EM + K LF G+
Sbjct: 179 NLAREDTA-DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
Query: 188 NSLITLGRIVGKSRKPS------FCKLSLRDHLTNGF------------PGLEPAGIDLI 229
L +IV P F S RD+L N P +P +DLI
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI 297
Query: 230 SKMLGMDPDKRITAAEALQQEYFK 253
+KML +P +RI+ +AL+ YF+
Sbjct: 298 AKMLEFNPQRRISTEQALRHPYFE 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 58/272 (21%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ L +NH NII L+ V + Q +YL V E +L ++ D
Sbjct: 70 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIHMELDHERM- 126
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 127 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 169
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + + V T YY+APE++LG+ Y VDIW VGCI GE+V G +F G +
Sbjct: 170 LARTA-STNFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 189 SLITLGRIVGKSRKPS-----FCKLSLRDHLTN--GFPGLE-----PAGI---------- 226
+ +++ + PS + ++R+++ N +PG+ P I
Sbjct: 228 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKI 287
Query: 227 ------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DPDKRI+ EAL+ Y
Sbjct: 288 KTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 43/264 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRV-------ASQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
++RE+ L +HPNI+ L + A +YL V E DLA ++ + ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYL--VTELMRTDLAQVIHDQRIVISP 133
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ F + L +L E + RDL P NIL+ D + + F
Sbjct: 134 QHIQYFMYHILLGLHVLHE--------------AGVVHRDLHPGNILL-ADNNDITICDF 178
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
LA+ A + V +Y+APEL++ ++ VD+W GC+ EM + K LF G+
Sbjct: 179 NLAREDTA-DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237
Query: 188 NSLITLGRIVGKSRKPS------FCKLSLRDHLTNGF------------PGLEPAGIDLI 229
L +IV P F S RD+L N P +P +DLI
Sbjct: 238 TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLI 297
Query: 230 SKMLGMDPDKRITAAEALQQEYFK 253
+KML +P +RI+ +AL+ YF+
Sbjct: 298 AKMLEFNPQRRISTEQALRHPYFE 321
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 127/272 (46%), Gaps = 58/272 (21%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ L +NH NII L+ V + Q +YL V E +L ++ D
Sbjct: 72 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYL--VMELMDANLCQVIHMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
LA++ + V T YY+APE++LG+ Y+ VDIW VGCI GE+V G +F G +
Sbjct: 172 LARTA-CTNFMMTPYVVTRYYRAPEVILGM-GYAANVDIWSVGCIMGELVKGCVIFQGTD 229
Query: 189 SLITLGRIVGKSRKPS-----FCKLSLRDHLTN--GFPGLE-----PAGI---------- 226
+ +++ + PS + ++R+++ N +PG++ P I
Sbjct: 230 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKI 289
Query: 227 ------DLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +DPDKRI+ EAL+ Y
Sbjct: 290 KTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L+ +++ D
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ + ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLVGIKHL----------HSAGIIHRDLKPSNIVVKSDA-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 128/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S EV T YY+APE++LG+ Y VDIW VGCI GEMV K LFP
Sbjct: 172 LART----AGTSFMMEPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVCHKILFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P+F K ++R+++ N FP L PA
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 127/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + EV T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 127/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L+ +++ D
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDA-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 127/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L+ +++ D
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDA-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 127/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L+ +++ D
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 126/275 (45%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 37/180 (20%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES---SAEVGTHYYKAPELLLGLLE 160
I RDLKP NI+V D T+K+ FGLA++ G S EV T YY+APE++LG+
Sbjct: 148 IHRDLKPSNIVVKSDC-TLKILDFGLART----AGTSFMMEPEVVTRYYRAPEVILGM-G 201
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK--SRKPSFCKL---SLRDHLT 215
Y VD+W VGCI GEMV K LFPG + + +++ + + P F K ++R ++
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 216 NG-----------FPG-LEPA-----------GIDLISKMLGMDPDKRITAAEALQQEYF 252
N FP L PA DL+SKML +D KRI+ EALQ Y
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 51/286 (17%)
Query: 4 IHNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIY--------LYPVFEYQVNDLA 55
+ N EG P + +RE+ L L H N++ L+ + +Y VF++ +DLA
Sbjct: 53 MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 112
Query: 56 YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV 115
LL N FT + + + RD+K N+L+
Sbjct: 113 GLLS--------------NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 116 DLDGKTVKVAGFGLAKSLYAYKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVG 171
DG +K+A FGLA++ K V T +Y+ PELLLG +Y +D+W G
Sbjct: 159 TRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 172 CIFGEMVSGKPLFPG---ANSLITLGRIVGKSRKPSFC------------------KLSL 210
CI EM + P+ G + L + ++ G S P K +
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCG-SITPEVWPNVDNYELYEKLELVKGQKRKV 276
Query: 211 RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVP 256
+D L +P +DLI K+L +DP +RI + +AL ++F P
Sbjct: 277 KDRLKAYV--RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 320
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 51/286 (17%)
Query: 4 IHNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIY--------LYPVFEYQVNDLA 55
+ N EG P + +RE+ L L H N++ L+ + +Y VF++ +DLA
Sbjct: 52 MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 111
Query: 56 YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV 115
LL N FT + + + RD+K N+L+
Sbjct: 112 GLLS--------------NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157
Query: 116 DLDGKTVKVAGFGLAKSLYAYKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVG 171
DG +K+A FGLA++ K V T +Y+ PELLLG +Y +D+W G
Sbjct: 158 TRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 216
Query: 172 CIFGEMVSGKPLFPG---ANSLITLGRIVGKSRKPSFC------------------KLSL 210
CI EM + P+ G + L + ++ G S P K +
Sbjct: 217 CIMAEMWTRSPIMQGNTEQHQLALISQLCG-SITPEVWPNVDNYELYEKLELVKGQKRKV 275
Query: 211 RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVP 256
+D L +P +DLI K+L +DP +RI + +AL ++F P
Sbjct: 276 KDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 319
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 51/286 (17%)
Query: 4 IHNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIY--------LYPVFEYQVNDLA 55
+ N EG P + +RE+ L L H N++ L+ + +Y VF++ +DLA
Sbjct: 53 MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 112
Query: 56 YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV 115
LL N FT + + + RD+K N+L+
Sbjct: 113 GLLS--------------NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 116 DLDGKTVKVAGFGLAKSLYAYKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVG 171
DG +K+A FGLA++ K V T +Y+ PELLLG +Y +D+W G
Sbjct: 159 TRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 172 CIFGEMVSGKPLFPG---ANSLITLGRIVGKSRKPSFC------------------KLSL 210
CI EM + P+ G + L + ++ G S P K +
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCG-SITPEVWPNVDNYELYEKLELVKGQKRKV 276
Query: 211 RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVP 256
+D L +P +DLI K+L +DP +RI + +AL ++F P
Sbjct: 277 KDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 320
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 120/286 (41%), Gaps = 51/286 (17%)
Query: 4 IHNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIY--------LYPVFEYQVNDLA 55
+ N EG P + +RE+ L L H N++ L+ + +Y VF++ +DLA
Sbjct: 53 MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLA 112
Query: 56 YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV 115
LL N FT + + + RD+K N+L+
Sbjct: 113 GLLS--------------NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 116 DLDGKTVKVAGFGLAKSLYAYKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVG 171
DG +K+A FGLA++ K V T +Y+ PELLLG +Y +D+W G
Sbjct: 159 TRDG-VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 172 CIFGEMVSGKPLFPG---ANSLITLGRIVGKSRKPSFC------------------KLSL 210
CI EM + P+ G + L + ++ G S P K +
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCG-SITPEVWPNVDNYELYEKLELVKGQKRKV 276
Query: 211 RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVP 256
+D L +P +DLI K+L +DP +RI + +AL ++F P
Sbjct: 277 KDRLKAYVR--DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP 320
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L+ +++ D
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ + ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLVGIKHL----------HSAGIIHRDLKPSNIVVKSDA-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VG I GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 126/275 (45%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 126/275 (45%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 129
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 130 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 172
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 173 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 227
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 228 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 287
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 288 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 127/275 (46%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L+ +++ D
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLSQVIQMELDHERM- 128
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ + ++ I RDLKP NI+V D T+K+ FG
Sbjct: 129 ------SYLLYQMLVGIKHL----------HSAGIIHRDLKPSNIVVKSDA-TLKILDFG 171
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VDIW VG I GEM+ G LFP
Sbjct: 172 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFP 226
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 227 GTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 286
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 125/275 (45%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 74 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 130
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 131 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 173
Query: 129 LAKSLYAYKGESSAEVG---THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S V T YY+APE++LG+ Y VDIW VGCI GEM+ G LFP
Sbjct: 174 LART----AGTSFMMVPFVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFP 228
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 229 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 288
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 289 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 94/180 (52%), Gaps = 37/180 (20%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES---SAEVGTHYYKAPELLLGLLE 160
I RDLKP NI+V D T+K+ FGLA++ G S + V T YY+APE++LG+
Sbjct: 142 IHRDLKPSNIVVKSDC-TLKILDFGLART----AGTSFMMTPYVVTRYYRAPEVILGM-G 195
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK--SRKPSFCKL---SLRDHLT 215
Y VD+W VGCI GEMV K LFPG + + +++ + + P F K ++R ++
Sbjct: 196 YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 255
Query: 216 NG-----------FPG-LEPA-----------GIDLISKMLGMDPDKRITAAEALQQEYF 252
N FP L PA DL+SKML +D KRI+ EALQ Y
Sbjct: 256 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 126/275 (45%), Gaps = 64/275 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--------QGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
RE+ + +NH NII L+ V + Q +Y+ V E +L +++ D
Sbjct: 77 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI--VMELMDANLCQVIQMELDHERM- 133
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
SY L+ ++ I RDLKP NI+V D T+K+ FG
Sbjct: 134 ------SYLLYQMLCGIKHL----------HSAGIIHRDLKPSNIVVKSDC-TLKILDFG 176
Query: 129 LAKSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFP 185
LA++ G S + V T YY+APE++LG+ Y VD+W VGCI GEMV K LFP
Sbjct: 177 LART----AGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHKILFP 231
Query: 186 GANSLITLGRIVGK--SRKPSFCKL---SLRDHLTNG-----------FPG-LEPA---- 224
G + + +++ + + P F K ++R ++ N FP L PA
Sbjct: 232 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH 291
Query: 225 -------GIDLISKMLGMDPDKRITAAEALQQEYF 252
DL+SKML +D KRI+ EALQ Y
Sbjct: 292 NKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 130/313 (41%), Gaps = 88/313 (28%)
Query: 15 MIREVSCLMELNHPNIIRLMRVAS-----QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYS 69
++RE++ L L IIRL + + LY V E +DL L K P +
Sbjct: 72 ILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTP-----IFL 126
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
T+ L+ LL E F + I RDLKP N L++ D +VKV FGL
Sbjct: 127 TEEHIKTILYN-LLLGENFI---------HESGIIHRDLKPANCLLNQDC-SVKVCDFGL 175
Query: 130 AKSLYAYKG-------ESSAEVGTH---------------YYKAPELLLGLLEYSTAVDI 167
A+++ + K E + E G H +Y+APEL+L Y+ ++DI
Sbjct: 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDI 235
Query: 168 WPVGCIFGEMV-----------SGKPLFPGA--------------------NSLITLGRI 196
W GCIF E++ + PLFPG+ + L + I
Sbjct: 236 WSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNI 295
Query: 197 VGKS--------RKPSFCK-LSLRDH-----LTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
+G KP K + L H L +P + GI+L+ ML +P+KRIT
Sbjct: 296 IGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRIT 355
Query: 243 AAEALQQEYFKDV 255
+AL Y KDV
Sbjct: 356 IDQALDHPYLKDV 368
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 124/327 (37%), Gaps = 108/327 (33%)
Query: 15 MIREVSCLMELNHPNIIRLMRVA-----SQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYS 69
++RE++ L LNH ++++++ + + LY V E +D
Sbjct: 99 ILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFK-------------- 144
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIR------RDLKPVNILVDLDGKTVK 123
LF T + + E G +Y+ RDLKP N LV+ D +VK
Sbjct: 145 -------KLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDC-SVK 196
Query: 124 VAGFGLAKSL-YAYKGES--------------------------SAEVGTHYYKAPELLL 156
V FGLA+++ Y G S + V T +Y+APEL+L
Sbjct: 197 VCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL 256
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-----------GKPLFPGA------------------ 187
Y+ A+D+W +GCIF E+++ PLFPG+
Sbjct: 257 LQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFH 316
Query: 188 -----NSLITLGRIVGKSRKPSFCKLSLRD--------------HLTNGFPGLEPAGIDL 228
+ L + I+G + L D L FP I L
Sbjct: 317 TRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHL 376
Query: 229 ISKMLGMDPDKRITAAEALQQEYFKDV 255
+ +ML +P+KRIT E L +FK+V
Sbjct: 377 LKRMLVFNPNKRITINECLAHPFFKEV 403
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 138
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 139 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 187
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 301
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 302 DHQERLTALEAMTHPYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 138
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 139 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 187
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 301
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 302 DHQERLTALEAMTHPYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 139
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 140 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 188
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 302
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 303 DHQERLTALEAMTHPYFQQV 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 138
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 139 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 187
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 301
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 302 DHQERLTALEAMTHPYFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 138
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 139 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 187
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 301
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 302 DHQERLTALEAMTHPYFQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 138
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 139 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 187
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 301
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 302 DHQERLTALEAMTHPYFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKALDYC 143
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 144 H-------------SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 189
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 190 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 249
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 250 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 303
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 304 DHQERLTALEAMTHPYFQQV 323
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 139
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 140 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 188
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 302
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 303 DHQERLTALEAMTHPYFQQV 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKAL--- 138
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 139 ----------DYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 187
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 301
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 302 DHQERLTALEAMTHPYFQQV 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 56/260 (21%)
Query: 28 PNIIRLMRVASQGIYLYP--VFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLV 85
PNI++L+ + P +FEY VN+ + + YP ++ Y + + Y L
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEY-VNNTDFKVLYP--TLTDYDIRYY-IYELLKALDYC 162
Query: 86 EEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVG 145
+ RD+KP N+++D + + +++ +GLA+ Y E + V
Sbjct: 163 H-------------SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVA 208
Query: 146 THYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVG--- 198
+ Y+K PELL+ L +Y ++D+W +GC+F M+ K P F G ++ L+ + +++G
Sbjct: 209 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 268
Query: 199 ----------------------KSRKPSFCKLSLRD-HLTNGFPGLEPAGIDLISKMLGM 235
SRKP ++ + HL + P ID + K+L
Sbjct: 269 LNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRY 322
Query: 236 DPDKRITAAEALQQEYFKDV 255
D +R+TA EA+ YF+ V
Sbjct: 323 DHQERLTALEAMTHPYFQQV 342
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 131/316 (41%), Gaps = 91/316 (28%)
Query: 15 MIREVSCLMELNHPNIIRLMR-VASQGIY----LYPVFEYQVNDLAYLLKYPKDSMNGYS 69
++RE++ L L IIRL + + + LY V E +DL L K P +
Sbjct: 74 ILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTP-----IFL 128
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
T+ + ++ LL E+F + I RDLKP N L++ D +VK+ FGL
Sbjct: 129 TEQ-HVKTILYNLLLGEKFI---------HESGIIHRDLKPANCLLNQDC-SVKICDFGL 177
Query: 130 AKSLYA-------------------------YKGESSAEVGTHYYKAPELLLGLLEYSTA 164
A+++ + K + ++ V T +Y+APEL+L Y+ +
Sbjct: 178 ARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNS 237
Query: 165 VDIWPVGCIFGEMVSGK-----------PLFPGA--------------------NSLITL 193
+DIW GCIF E+++ PLFPG+ + L +
Sbjct: 238 IDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNII 297
Query: 194 GRIVG-----------KSRKPSFCKL-SLRD--HLTNGFPGLEPAGIDLISKMLGMDPDK 239
++G K + KL RD L+ + + GIDL+ ML + K
Sbjct: 298 FNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQK 357
Query: 240 RITAAEALQQEYFKDV 255
RIT +AL Y KDV
Sbjct: 358 RITIDKALSHPYLKDV 373
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
S++REV L +L+HPNI++L Y Y V E G
Sbjct: 70 KESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG--------------GELFD 115
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK--TVKVAGFGL 129
S F+ + + RDLKP N+L++ K +++ FGL
Sbjct: 116 EIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175
Query: 130 AKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ A K + ++GT YY APE+L G Y D+W G I ++SG P F GAN
Sbjct: 176 STHFEASK-KMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 232
Query: 190 LITLGRI-VGKS--RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEA 246
L ++ GK P + K+S + DLI KML P RI+A +A
Sbjct: 233 YDILKKVEKGKYTFELPQWKKVS-------------ESAKDLIRKMLTYVPSMRISARDA 279
Query: 247 LQQEYFK 253
L E+ +
Sbjct: 280 LDHEWIQ 286
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 103/245 (42%), Gaps = 35/245 (14%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
S++REV L +L+HPNI++L Y Y V E G
Sbjct: 95 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG--------------GELFDEI 140
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK--TVKVAGFGLAK 131
S F+ + + RDLKP N+L++ K +++ FGL+
Sbjct: 141 ISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 200
Query: 132 SLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A K + ++GT YY APE+L G Y D+W G I ++SG P F GAN
Sbjct: 201 HFEASK-KMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYD 257
Query: 192 TLGRI-VGKS--RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
L ++ GK P + K+S + DLI KML P RI+A +AL
Sbjct: 258 ILKKVEKGKYTFELPQWKKVS-------------ESAKDLIRKMLTYVPSMRISARDALD 304
Query: 249 QEYFK 253
E+ +
Sbjct: 305 HEWIQ 309
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 25/173 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D K +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 154 MHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDY 212
Query: 164 AVDIWPVGCIFGEMV-SGKPLFPGANS---LITLGRIVGKSRKPSFCK---LSLRDHLTN 216
++D+W +GC+ M+ +P F G ++ L+ + +++G + K + L H +
Sbjct: 213 SLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFND 272
Query: 217 -----------GFPGLE------PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
F E P +DL+ K+L D +R+TA EA++ YF
Sbjct: 273 ILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 25/173 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D K +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 159 MHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDY 217
Query: 164 AVDIWPVGCIFGEMV-SGKPLFPGANS---LITLGRIVGKSRKPSFCK---LSLRDHLTN 216
++D+W +GC+ M+ +P F G ++ L+ + +++G + K + L H +
Sbjct: 218 SLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFND 277
Query: 217 -----------GFPGLE------PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
F E P +DL+ K+L D +R+TA EA++ YF
Sbjct: 278 ILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 103/245 (42%), Gaps = 35/245 (14%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
S++REV L +L+HPNI++L Y Y V E G
Sbjct: 96 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG--------------GELFDEI 141
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK--TVKVAGFGLAK 131
S F+ + + RDLKP N+L++ K +++ FGL+
Sbjct: 142 ISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 201
Query: 132 SLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A K + ++GT YY APE+L G Y D+W G I ++SG P F GAN
Sbjct: 202 HFEASK-KMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYD 258
Query: 192 TLGRI-VGKS--RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
L ++ GK P + K+S + DLI KML P RI+A +AL
Sbjct: 259 ILKKVEKGKYTFELPQWKKVS-------------ESAKDLIRKMLTYVPSMRISARDALD 305
Query: 249 QEYFK 253
E+ +
Sbjct: 306 HEWIQ 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKN 72
S++REV L +L+HPNI++L Y FE D Y + G
Sbjct: 77 ESLLREVQLLKQLDHPNIMKL----------YEFFE----DKGYFYLVGEVYTGGELFDE 122
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK--TVKVAGFGLA 130
S F+ + + RDLKP N+L++ K +++ FGL+
Sbjct: 123 IISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Query: 131 KSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
A K + ++GT YY APE+L G Y D+W G I ++SG P F GAN
Sbjct: 183 THFEASK-KMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEY 239
Query: 191 ITLGRI-VGKS--RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
L ++ GK P + K+S + DLI KML P RI+A +AL
Sbjct: 240 DILKKVEKGKYTFELPQWKKVS-------------ESAKDLIRKMLTYVPSMRISARDAL 286
Query: 248 QQEYFK 253
E+ +
Sbjct: 287 DHEWIQ 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
S++REV L +L+HPNI +L Y Y V E G
Sbjct: 72 SLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG--------------GELFDEI 117
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK--TVKVAGFGLAK 131
S F+ + + RDLKP N+L++ K +++ FGL+
Sbjct: 118 ISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
Query: 132 SLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A K + ++GT YY APE+L G Y D+W G I ++SG P F GAN
Sbjct: 178 HFEASK-KXKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYD 234
Query: 192 TLGRI-VGKS--RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
L ++ GK P + K+S + DLI K L P RI+A +AL
Sbjct: 235 ILKKVEKGKYTFELPQWKKVS-------------ESAKDLIRKXLTYVPSXRISARDALD 281
Query: 249 QEYFK 253
E+ +
Sbjct: 282 HEWIQ 286
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 42/249 (16%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L ++ +
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQR 113
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ +G+ +K+
Sbjct: 114 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSNGE-LKI 153
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + G P F
Sbjct: 154 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPF 210
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L + +R+T A
Sbjct: 211 EAHTYQETYRRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNASQRLTLA 256
Query: 245 EALQQEYFK 253
E L+ + K
Sbjct: 257 EVLEHPWIK 265
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+L+D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVLIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 37/252 (14%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFE-YQVNDL-AYLLKYPKDSMNGYST 70
S+++REV L +L+HPNI++L + Y V E Y +L ++K + S + +
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR 125
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT--VKVAGFG 128
+S T + RDLKP NIL++ K +K+ FG
Sbjct: 126 IIKQVFSGITYM----------------HKHNIVHRDLKPENILLESKEKDCDIKIIDFG 169
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
L+ + + + +GT YY APE+L G Y D+W G I ++SG P F G N
Sbjct: 170 LS-TCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKN 226
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
L R+ ++ K +F R + DLI KML P RITA + L+
Sbjct: 227 EYDILKRV--ETGKYAFDLPQWR--------TISDDAKDLIRKMLTFHPSLRITATQCLE 276
Query: 249 ----QEYFKDVP 256
Q+Y + P
Sbjct: 277 HPWIQKYSSETP 288
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A +A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 151 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 209
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 210 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 269
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 270 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 325
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L ++ +
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQR 113
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ +G+ +K+
Sbjct: 114 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSNGE-LKI 153
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + G P F
Sbjct: 154 ADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGMPPF 210
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L + +R+T A
Sbjct: 211 EAHTYQETYRRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNASQRLTLA 256
Query: 245 EALQQEYFK 253
E L+ + K
Sbjct: 257 EVLEHPWIK 265
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ R H N + P +D + K+L D R+TA EA++ YF
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 210
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 211 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 270
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 271 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 210
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 211 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 270
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 271 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 326
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKN 72
S+++REV L +L+HPNI++L + Y V E + D + K
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF------DEI--IKRKR 117
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT--VKVAGFGLA 130
F+ + ++ + F + RDLKP NIL++ K +K+ FGL+
Sbjct: 118 FSEHD--AARIIKQVFSGITYMHKHNI----VHRDLKPENILLESKEKDCDIKIIDFGLS 171
Query: 131 KSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
+ + + +GT YY APE+L G Y D+W G I ++SG P F G N
Sbjct: 172 -TCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
Query: 191 ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQE 250
L R+ ++ K +F R + DLI KML P RITA + L+
Sbjct: 229 DILKRV--ETGKYAFDLPQWR--------TISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 251 YFK 253
+ +
Sbjct: 279 WIQ 281
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ R H N + P +D + K+L D R+TA EA++ YF
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 113 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 152
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A +A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 153 ADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 210 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 255
Query: 245 EALQQEY 251
E L+ +
Sbjct: 256 EVLEHPW 262
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 29/243 (11%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKN 72
S+++REV L +L+HPNI++L + Y V E + D + K
Sbjct: 66 STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF------DEI--IKRKR 117
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT--VKVAGFGLA 130
F+ + ++ + F + RDLKP NIL++ K +K+ FGL+
Sbjct: 118 FSEHD--AARIIKQVFSGITYMHKHNI----VHRDLKPENILLESKEKDCDIKIIDFGLS 171
Query: 131 KSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
+ + + +GT YY APE+L G Y D+W G I ++SG P F G N
Sbjct: 172 -TCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
Query: 191 ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQE 250
L R+ ++ K +F R + DLI KML P RITA + L+
Sbjct: 229 DILKRV--ETGKYAFDLPQWR--------TISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 251 YFK 253
+ +
Sbjct: 279 WIQ 281
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ R H N + P +D + K+L D R+TA EA++ YF
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 211
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 212 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 271
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ R H N + P +D + K+L D R+TA EA++ YF
Sbjct: 272 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 27/177 (15%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+KP N+++D + + +++ +GLA+ Y E + V + Y+K PELL+ Y
Sbjct: 158 MHRDVKPHNVMIDHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDY 216
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANS---LITLGRIVGKSR------------KPSFCK 207
++D+W +GC+ M+ K P F G ++ L+ + +++G P F
Sbjct: 217 SLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFND 276
Query: 208 LSLRD---------HLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+ R H N + P +D + K+L D R+TA EA++ YF V
Sbjct: 277 ILGRHSRKRWERFVHSENQHL-VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV 332
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 113 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 152
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 153 ANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 210 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 255
Query: 245 EALQQEY 251
E L+ +
Sbjct: 256 EVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 111
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 112 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 151
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 152 ANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 208
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 209 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 254
Query: 245 EALQQEY 251
E L+ +
Sbjct: 255 EVLEHPW 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 113 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 152
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 153 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 210 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 255
Query: 245 EALQQEY 251
E L+ +
Sbjct: 256 EVLEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 47 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 106
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 107 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 146
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 147 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 203
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 204 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 249
Query: 245 EALQQEY 251
E L+ +
Sbjct: 250 EVLEHPW 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 113 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 152
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 153 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 210 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 255
Query: 245 EALQQEY 251
E L+ +
Sbjct: 256 EVLEHPW 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 49 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 108
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 109 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 148
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 149 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 205
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 206 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 251
Query: 245 EALQQEY 251
E L+ +
Sbjct: 252 EVLEHPW 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 115 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 154
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 155 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 211
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 212 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 257
Query: 245 EALQQEY 251
E L+ +
Sbjct: 258 EVLEHPW 264
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 67 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 126
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 127 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 166
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 167 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 223
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 224 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 269
Query: 245 EALQQEY 251
E L+ +
Sbjct: 270 EVLEHPW 276
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR 114
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 115 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 154
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 155 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 211
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 212 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 257
Query: 245 EALQQEY 251
E L+ +
Sbjct: 258 EVLEHPW 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 42/248 (16%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 135
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 136 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 175
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 176 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 232
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 233 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 278
Query: 245 EALQQEYF 252
E L+ +
Sbjct: 279 EVLEHPWI 286
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 54 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 113
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 114 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 153
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 154 ADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 210
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 211 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 256
Query: 245 EALQQEY 251
E L+ +
Sbjct: 257 EVLEHPW 263
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRTELCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + + I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KKVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A +A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQDTYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRTXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 115 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 154
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 155 ADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 211
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 212 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 257
Query: 245 EALQQEY 251
E L+ +
Sbjct: 258 EVLEHPW 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 111 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 150
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 151 ADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 207
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 208 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 253
Query: 245 EALQQEY 251
E L+ +
Sbjct: 254 EVLEHPW 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 111 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 150
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 151 ADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 207
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 208 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 253
Query: 245 EALQQEY 251
E L+ +
Sbjct: 254 EVLEHPW 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 50 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 109
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 110 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 149
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 150 ADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 206
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 207 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 252
Query: 245 EALQQEY 251
E L+ +
Sbjct: 253 EVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 113 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 152
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 153 ADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 210 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 255
Query: 245 EALQQEY 251
E L+ +
Sbjct: 256 EVLEHPW 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 52 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 111
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 112 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 151
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 152 ADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 208
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 209 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 254
Query: 245 EALQQEY 251
E L+ +
Sbjct: 255 EVLEHPW 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 51 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 110
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 111 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 150
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S +A + GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 151 ADFGW--SCHAPSSRRTTLSGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 207
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 208 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 253
Query: 245 EALQQEY 251
E L+ +
Sbjct: 254 EVLEHPW 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 135
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 136 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 175
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 176 ADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 232
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 233 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 278
Query: 245 EALQQEY 251
E L+ +
Sbjct: 279 EVLEHPW 285
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 53 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 112
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 113 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 152
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 153 ADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 209
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 210 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 255
Query: 245 EALQQEY 251
E L+ +
Sbjct: 256 EVLEHPW 262
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 103/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR 114
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 115 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 154
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A GT Y PE++ G + + VD+W +G + E + GKP F
Sbjct: 155 ADFGW--SVHAPSSRRXXLXGTLDYLPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPF 211
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 212 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPMLR 257
Query: 245 EALQQEY 251
E L+ +
Sbjct: 258 EVLEHPW 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 105/252 (41%), Gaps = 31/252 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFE-YQVNDLAYLLKYPKD 63
+ +E + E+S L L+HPNII+L V Y Y V E Y+ +L +
Sbjct: 83 NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI----- 137
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK--T 121
+N + ++ ++ L + RD+KP NIL++
Sbjct: 138 -INRHKFDECDAANIMKQIL---------SGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 122 VKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK 181
+K+ FGL+ S ++ + +GT YY APE+L +Y+ D+W G I ++ G
Sbjct: 188 IKIVDFGLS-SFFSKDYKLRDRLGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCGY 244
Query: 182 PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRI 241
P F G N + ++ F N + + +LI ML D +KR
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDF----------NDWKNISDEAKELIKLMLTYDYNKRC 294
Query: 242 TAAEALQQEYFK 253
TA EAL + K
Sbjct: 295 TAEEALNSRWIK 306
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 105/246 (42%), Gaps = 30/246 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMR--VASQGIYLYPVFEY-QVNDLAYLLKYPKDSM 65
E ++ EV+ L EL HPNI+R + LY V EY + DLA ++
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI------T 99
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK-TVKV 124
G + + + G + RDLKP N+ LDGK VK+
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF--LDGKQNVKL 157
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
FGLA+ L + A VGT YY +PE + + Y+ DIW +GC+ E+ + P F
Sbjct: 158 GDFGLARILNHDTSFAKAFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLR--DHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
+ + + GK R+ F ++ R D L ++I++ML + R +
Sbjct: 217 ----TAFSQKELAGKIREGKFRRIPYRYSDELN-----------EIITRMLNLKDYHRPS 261
Query: 243 AAEALQ 248
E L+
Sbjct: 262 VEEILE 267
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+I E+ + E +PNI+ + G L+ V EY + G S +
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY---------------LAGGSLTDVV 108
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ + + + I RD+K NIL+ +DG +VK+ FG +
Sbjct: 109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQIT 167
Query: 135 AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLG 194
+ + S VGT Y+ APE++ Y VDIW +G + EM+ G+P + N L L
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 195 RIVGKSRKPSFCKLSLRDHLTNGFPGLE-PAGI-----DLISKMLGMDPDKRITAAEALQ 248
I TNG P L+ P + D +++ L MD +KR +A E LQ
Sbjct: 227 LIA-----------------TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
Query: 249 QEYFK 253
++ K
Sbjct: 270 HQFLK 274
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 102/247 (41%), Gaps = 42/247 (17%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYLLKYPKDS 64
GV + REV L HPNI+RL +Y + EY +L L K+ +
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
Y T+ N+ S + R I RD+KP N+L+ G+ +K+
Sbjct: 115 TATYITELANALSYCHS-------------------KRVIHRDIKPENLLLGSAGE-LKI 154
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
A FG S++A + GT Y PE + G + VD+W +G + E + GKP F
Sbjct: 155 ADFGW--SVHAPSSRRTTLCGTLDYLPPEXIEGRX-HDEKVDLWSLGVLCYEFLVGKPPF 211
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T RI S + + D +T G DLIS++L +P +R
Sbjct: 212 EANTYQETYKRI-------SRVEFTFPDFVTEG-------ARDLISRLLKHNPSQRPXLR 257
Query: 245 EALQQEY 251
E L+ +
Sbjct: 258 EVLEHPW 264
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+I E+ + E +PNI+ + G L+ V EY + G S +
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY---------------LAGGSLTDVV 108
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ + + + I RD+K NIL+ +DG +VK+ FG +
Sbjct: 109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQIT 167
Query: 135 AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLG 194
+ + S VGT Y+ APE++ Y VDIW +G + EM+ G+P + N L L
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 195 RIVGKSRKPSFCKLSLRDHLTNGFPGLE-PAGI-----DLISKMLGMDPDKRITAAEALQ 248
I TNG P L+ P + D +++ L MD +KR +A E LQ
Sbjct: 227 LIA-----------------TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
Query: 249 QEYFK 253
++ K
Sbjct: 270 HQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+I E+ + E +PNI+ + G L+ V EY + G S +
Sbjct: 64 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY---------------LAGGSLTDVV 108
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ + + + I RD+K NIL+ +DG +VK+ FG +
Sbjct: 109 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQIT 167
Query: 135 AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLG 194
+ + S VGT Y+ APE++ Y VDIW +G + EM+ G+P + N L L
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 195 RIVGKSRKPSFCKLSLRDHLTNGFPGLE-PAGI-----DLISKMLGMDPDKRITAAEALQ 248
I TNG P L+ P + D +++ L MD +KR +A E LQ
Sbjct: 227 LIA-----------------TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
Query: 249 QEYFK 253
++ K
Sbjct: 270 HQFLK 274
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL-AYLLKYPKDSMNGYSTKNFNS 75
RE+S L L HP+II+L V + V EY N+L Y+++ +D M+ + F
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRF-- 118
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
F + E+ + + RDLKP N+L+D + VK+A FGL+ ++
Sbjct: 119 ---FQQIISAVEYCHRH---------KIVHRDLKPENLLLD-EHLNVKIADFGLS-NIMT 164
Query: 136 YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGR 195
G+ Y APE++ G L VD+W G I M+ + F + +
Sbjct: 165 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN 224
Query: 196 IV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK- 253
I G P F L P LI +ML ++P RI+ E +Q ++FK
Sbjct: 225 ISNGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 269
Query: 254 DVP 256
D+P
Sbjct: 270 DLP 272
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL-AYLLKYPKDSMNGYSTKNFNS 75
RE+S L L HP+II+L V + V EY N+L Y+++ +D M+ + F
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRF-- 117
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
F + E+ + + RDLKP N+L+D + VK+A FGL+ ++
Sbjct: 118 ---FQQIISAVEYCHRH---------KIVHRDLKPENLLLD-EHLNVKIADFGLS-NIMT 163
Query: 136 YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGR 195
G+ Y APE++ G L VD+W G I M+ + F + +
Sbjct: 164 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN 223
Query: 196 IV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK- 253
I G P F L P LI +ML ++P RI+ E +Q ++FK
Sbjct: 224 ISNGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268
Query: 254 DVP 256
D+P
Sbjct: 269 DLP 271
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL-AYLLKYPKDSMNGYSTKNFNS 75
RE+S L L HP+II+L V + V EY N+L Y+++ +D M+ + F
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRF-- 112
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
F + E+ + + RDLKP N+L+D + VK+A FGL+ ++
Sbjct: 113 ---FQQIISAVEYCHRH---------KIVHRDLKPENLLLD-EHLNVKIADFGLS-NIMT 158
Query: 136 YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGR 195
G+ Y APE++ G L VD+W G I M+ + F + +
Sbjct: 159 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN 218
Query: 196 IV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK- 253
I G P F L P LI +ML ++P RI+ E +Q ++FK
Sbjct: 219 ISNGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 263
Query: 254 DVP 256
D+P
Sbjct: 264 DLP 266
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL-AYLLKYPKDSMNGYSTKNFNS 75
RE+S L L HP+II+L V + V EY N+L Y+++ +D M+ + F
Sbjct: 53 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ--RDKMSEQEARRF-- 108
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
F + E+ + + RDLKP N+L+D + VK+A FGL+ ++
Sbjct: 109 ---FQQIISAVEYCHRH---------KIVHRDLKPENLLLD-EHLNVKIADFGLS-NIMT 154
Query: 136 YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGR 195
G+ Y APE++ G L VD+W G I M+ + F + +
Sbjct: 155 DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN 214
Query: 196 IV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK- 253
I G P F L P LI +ML ++P RI+ E +Q ++FK
Sbjct: 215 ISNGVYTLPKF---------------LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 259
Query: 254 DVP 256
D+P
Sbjct: 260 DLP 262
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 105/246 (42%), Gaps = 30/246 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMR--VASQGIYLYPVFEY-QVNDLAYLLKYPKDSM 65
E ++ EV+ L EL HPNI+R + LY V EY + DLA ++
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI------T 99
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK-TVKV 124
G + + + G + RDLKP N+ LDGK VK+
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF--LDGKQNVKL 157
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
FGLA+ L + + VGT YY +PE + + Y+ DIW +GC+ E+ + P F
Sbjct: 158 GDFGLARILNHDEDFAKEFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLR--DHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
+ + + GK R+ F ++ R D L ++I++ML + R +
Sbjct: 217 ----TAFSQKELAGKIREGKFRRIPYRYSDELN-----------EIITRMLNLKDYHRPS 261
Query: 243 AAEALQ 248
E L+
Sbjct: 262 VEEILE 267
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 44/247 (17%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E+S + +L+H N+I+L Y FE + ND+ +++Y D + SY+
Sbjct: 136 EISVMNQLDHANLIQL----------YDAFESK-NDIVLVMEYV-DGGELFDRIIDESYN 183
Query: 78 L--FTTFLLVEEFXXXXXXXXXXFGTRYIRR------DLKPVNIL-VDLDGKTVKVAGFG 128
L T L +++ G R++ + DLKP NIL V+ D K +K+ FG
Sbjct: 184 LTELDTILFMKQICE---------GIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFG 234
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELL-LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
LA+ Y + + GT + APE++ + + T D+W VG I ++SG F G
Sbjct: 235 LARR-YKPREKLKVNFGTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGD 291
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
N TL I+ C+ L D F + + ISK+L + RI+A+EAL
Sbjct: 292 NDAETLNNILA-------CRWDLEDE---EFQDISEEAKEFISKLLIKEKSWRISASEAL 341
Query: 248 QQEYFKD 254
+ + D
Sbjct: 342 KHPWLSD 348
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 30/246 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMR--VASQGIYLYPVFEY-QVNDLAYLLKYPKDSM 65
E ++ EV+ L EL HPNI+R + LY V EY + DLA ++
Sbjct: 46 EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI------T 99
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK-TVKV 124
G + + + G + RDLKP N+ LDGK VK+
Sbjct: 100 KGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF--LDGKQNVKL 157
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
FGLA+ L + VGT YY +PE + + Y+ DIW +GC+ E+ + P F
Sbjct: 158 GDFGLARILNHDTSFAKTFVGTPYYMSPE-QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLR--DHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
+ + + GK R+ F ++ R D L ++I++ML + R +
Sbjct: 217 ----TAFSQKELAGKIREGKFRRIPYRYSDELN-----------EIITRMLNLKDYHRPS 261
Query: 243 AAEALQ 248
E L+
Sbjct: 262 VEEILE 267
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 112/253 (44%), Gaps = 34/253 (13%)
Query: 8 MEGVPSSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMN 66
+E V + RE L ++ HP+II L+ +++ VF+ + K +++
Sbjct: 139 LEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALS 198
Query: 67 GYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAG 126
T+ S+ + L F + RDLKP NIL+D D ++++
Sbjct: 199 EKETR-----SIMRSLLEAVSFL---------HANNIVHRDLKPENILLD-DNMQIRLSD 243
Query: 127 FGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLLE-----YSTAVDIWPVGCIFGEMVSG 180
FG S + GE E+ GT Y APE+L ++ Y VD+W G I +++G
Sbjct: 244 FGF--SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
Query: 181 KPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKR 240
P F ++ L I+ + S + R DLIS++L +DP+ R
Sbjct: 302 SPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVK----------DLISRLLQVDPEAR 351
Query: 241 ITAAEALQQEYFK 253
+TA +ALQ +F+
Sbjct: 352 LTAEQALQHPFFE 364
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+I E+ + E +PNI+ + G L+ V EY + G S +
Sbjct: 65 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY---------------LAGGSLTDVV 109
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ + + + I RD+K NIL+ +DG +VK+ FG +
Sbjct: 110 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQIT 168
Query: 135 AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLG 194
+ + S VGT Y+ APE++ Y VDIW +G + EM+ G+P + N L L
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227
Query: 195 RIVGKSRKPSFCKLSLRDHLTNGFPGLE-PAGI-----DLISKMLGMDPDKRITAAEALQ 248
I TNG P L+ P + D +++ L MD +KR +A E +Q
Sbjct: 228 LIA-----------------TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
Query: 249 QEYFK 253
++ K
Sbjct: 271 HQFLK 275
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNS 75
RE S L HP+I+ L+ S LY VFE+ DL + + D+ YS +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL 133
Y I RD+KP N+L+ + VK+ FG+A L
Sbjct: 135 Y-----------MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL 183
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITL 193
+ VGT ++ APE++ Y VD+W G I ++SG F G +
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 242
Query: 194 GRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
G I GK K++ R + + + DL+ +ML +DP +RIT EAL + K
Sbjct: 243 GIIKGKY------KMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
Query: 254 D 254
+
Sbjct: 292 E 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNS 75
RE S L HP+I+ L+ S LY VFE+ DL + + D+ YS +
Sbjct: 77 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 136
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL 133
Y I RD+KP +L+ + VK+ GFG+A L
Sbjct: 137 Y-----------MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 185
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITL 193
+ VGT ++ APE++ Y VD+W G I ++SG F G +
Sbjct: 186 GESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 244
Query: 194 GRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
G I GK K++ R + + + DL+ +ML +DP +RIT EAL + K
Sbjct: 245 GIIKGKY------KMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
Query: 254 D 254
+
Sbjct: 294 E 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNS 75
RE S L HP+I+ L+ S LY VFE+ DL + + D+ YS +
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL 133
Y I RD+KP +L+ + VK+ GFG+A L
Sbjct: 135 Y-----------MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITL 193
+ VGT ++ APE++ Y VD+W G I ++SG F G +
Sbjct: 184 GESGLVAGGRVGTPHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 242
Query: 194 GRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
G I GK K++ R + + + DL+ +ML +DP +RIT EAL + K
Sbjct: 243 GIIKGKY------KMNPRQ-----WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
Query: 254 D 254
+
Sbjct: 292 E 292
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 41/254 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKN 72
S ++ EV+ L L+HPNI++L Y FE + N YL+ M Y K
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKL----------YDFFEDKRN--YYLV------MECY--KG 120
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRY------IRRDLKPVNILVDLDGKT--VKV 124
+ + E G Y + RDLKP N+L++ K +K+
Sbjct: 121 GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKI 180
Query: 125 AGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
FGL+ +++ + + +GT YY APE+L +Y D+W +G I +++G P F
Sbjct: 181 VDFGLS-AVFENQKKMKERLGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPF 237
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
G T I+ K K + S + + DLI +ML D +RI+A
Sbjct: 238 GGQ----TDQEILRKVEKGKYTFDSPE------WKNVSEGAKDLIKQMLQFDSQRRISAQ 287
Query: 245 EALQQEYFKDVPGR 258
+AL+ + K++ +
Sbjct: 288 QALEHPWIKEMCSK 301
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 87/205 (42%), Gaps = 63/205 (30%)
Query: 104 IRRDLKPVNILV-DLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGL 158
I DLKP NIL+ + +K+ FG L + +Y + + +Y++PE+LLG+
Sbjct: 181 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-------XIQSRFYRSPEVLLGM 233
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVG--------------KSRK-- 202
Y A+D+W +GCI EM +G+PLF GAN + + +IV K+RK
Sbjct: 234 -PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFF 292
Query: 203 ----------------------PSFCKLSLRDHLTNGFPGLEPAG------------IDL 228
P KL + G PG AG DL
Sbjct: 293 EKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDL 352
Query: 229 ISKMLGMDPDKRITAAEALQQEYFK 253
I +ML DP RI ALQ +FK
Sbjct: 353 ILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G +KVA FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G +KVA FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 87/205 (42%), Gaps = 63/205 (30%)
Query: 104 IRRDLKPVNILV-DLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGL 158
I DLKP NIL+ + +K+ FG L + +Y + + +Y++PE+LLG+
Sbjct: 181 IHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQ-------XIQSRFYRSPEVLLGM 233
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVG--------------KSRK-- 202
Y A+D+W +GCI EM +G+PLF GAN + + +IV K+RK
Sbjct: 234 -PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFF 292
Query: 203 ----------------------PSFCKLSLRDHLTNGFPGLEPAG------------IDL 228
P KL + G PG AG DL
Sbjct: 293 EKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDL 352
Query: 229 ISKMLGMDPDKRITAAEALQQEYFK 253
I +ML DP RI ALQ +FK
Sbjct: 353 ILRMLDYDPKTRIQPYYALQHSFFK 377
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 87/205 (42%), Gaps = 63/205 (30%)
Query: 104 IRRDLKPVNILV-DLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGL 158
I DLKP NIL+ + +K+ FG L + +Y + + +Y++PE+LLG+
Sbjct: 162 IHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ-------XIQSRFYRSPEVLLGM 214
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVG--------------KSRK-- 202
Y A+D+W +GCI EM +G+PLF GAN + + +IV K+RK
Sbjct: 215 -PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFF 273
Query: 203 ----------------------PSFCKLSLRDHLTNGFPGLEPAG------------IDL 228
P KL + G PG AG DL
Sbjct: 274 EKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDL 333
Query: 229 ISKMLGMDPDKRITAAEALQQEYFK 253
I +ML DP RI ALQ +FK
Sbjct: 334 ILRMLDYDPKTRIQPYYALQHSFFK 358
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G +KVA FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G +KVA FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIKVADFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 103/245 (42%), Gaps = 40/245 (16%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+I E+ + E +PNI+ + G L+ V EY + G S +
Sbjct: 65 IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY---------------LAGGSLTDVV 109
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ + + + I R++K NIL+ +DG +VK+ FG +
Sbjct: 110 TETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDG-SVKLTDFGFCAQIT 168
Query: 135 AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLG 194
+ + S VGT Y+ APE++ Y VDIW +G + EM+ G+P + N L L
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227
Query: 195 RIVGKSRKPSFCKLSLRDHLTNGFPGLE-PAGI-----DLISKMLGMDPDKRITAAEALQ 248
I TNG P L+ P + D +++ L MD +KR +A E +Q
Sbjct: 228 LIA-----------------TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
Query: 249 QEYFK 253
++ K
Sbjct: 271 HQFLK 275
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 102/245 (41%), Gaps = 40/245 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY + EY +V D YL+ + +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGR------ 110
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + S F + ++ R + RDLK N+L+D D +K+A FG
Sbjct: 111 -MKEKEARSKFRQIVSAVQYCHQ---------KRIVHRDLKAENLLLDAD-MNIKIADFG 159
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + G+ A G Y APEL G VD+W +G I +VSG F G N
Sbjct: 160 FSNE-FTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ + L ++P KR T + +
Sbjct: 219 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKRFLVLNPIKRGTLEQIM 263
Query: 248 QQEYF 252
+ +
Sbjct: 264 KDRWI 268
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FGLAK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLMIDQQG-YIKVTDFGLAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GCLLKY---- 122
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 123 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 173
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL S + D+W +GCI ++V+G P
Sbjct: 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK-SASKSSDLWALGCIIYQLVAGLP 232
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 233 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
Query: 242 TAAE 245
E
Sbjct: 278 GCEE 281
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 34/246 (13%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGV + RE+ L+HPNI+RL +Y + EY P+ +
Sbjct: 64 EGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYA----------PRGELYKE 113
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ ++ T ++EE G + I RD+KP N+L+ L +K+A FG
Sbjct: 114 LQKSC-TFDEQRTATIMEELADALMYC---HGKKVIHRDIKPENLLLGL-KGELKIADFG 168
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
S++A GT Y PE++ G + ++ VD+W +G + E++ G P F A+
Sbjct: 169 W--SVHAPSLRRKTMCGTLDYLPPEMIEGRM-HNEKVDLWCIGVLCYELLVGNPPFESAS 225
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGI-DLISKMLGMDPDKRITAAEAL 247
T RIV K+ L+ FP P G DLISK+L +P +R+ A+
Sbjct: 226 HNETYRRIV---------KVDLK------FPASVPTGAQDLISKLLRHNPSERLPLAQVS 270
Query: 248 QQEYFK 253
+ +
Sbjct: 271 AHPWVR 276
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 40/245 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY + EY +V D YL+ + +
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD--YLVAHGR------ 107
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + S F + ++ R + RDLK N+L+D D +K+A FG
Sbjct: 108 -MKEKEARSKFRQIVSAVQYCHQ---------KRIVHRDLKAENLLLDAD-MNIKIADFG 156
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + G+ G+ Y APEL G VD+W +G I +VSG F G N
Sbjct: 157 FSNE-FTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ + L ++P KR T + +
Sbjct: 216 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKRFLVLNPIKRGTLEQIM 260
Query: 248 QQEYF 252
+ +
Sbjct: 261 KDRWI 265
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 120
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 121 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 171
Query: 125 AGFGLAKSLY--AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L + + ++A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 172 TDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 230
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 231 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
Query: 242 TAAE 245
E
Sbjct: 276 GCEE 279
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK----YPKDSMNGYSTKNFNSYSLFTT 81
HPNII L V G Y+Y V E L+K K + ++ S LFT
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTE--------LMKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 82 FLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL-VDLDG--KTVKVAGFGLAKSLYAYKG 138
VE + RDLKP NIL VD G +++++ FG AK L A G
Sbjct: 126 TKTVEYL----------HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
Query: 139 ESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG-KPLFPGANSLITLGRIV 197
T + APE+L Y A DIW +G + M++G P G + T I+
Sbjct: 176 LLMTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEIL 232
Query: 198 GKSRKPSFCKLSLRDHLTNGF-PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ F L+ G+ + DL+SKML +DP +R+TAA L+ +
Sbjct: 233 ARIGSGKFS-------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G ++V FGLAK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLMIDQQG-YIQVTDFGLAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLMIDQQG-YIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 47/250 (18%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
+++ EV+ L +L+HPNI++ LY FE + N YL+ + +
Sbjct: 67 ALLDEVAVLKQLDHPNIMK----------LYEFFEDKRN--YYLV-----------MEVY 103
Query: 74 NSYSLFTTFLLVEEFXXXXXX---XXXXFGTRY------IRRDLKPVNILVDLDGKT--V 122
LF +L ++F GT Y + RDLKP N+L++ + +
Sbjct: 104 RGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 163
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
K+ FGL+ + + G+ +GT YY APE+L +Y D+W G I ++ G P
Sbjct: 164 KIVDFGLS-AHFEVGGKMKERLGTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLCGYP 220
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
F G L R+ + K SF + + L+ ML +P KRI+
Sbjct: 221 PFGGQTDQEILKRV--EKGKFSFD--------PPDWTQVSDEAKQLVKLMLTYEPSKRIS 270
Query: 243 AAEALQQEYF 252
A EAL +
Sbjct: 271 AEEALNHPWI 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLMIDQQG-YIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 72 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 125
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 126 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 176
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 177 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 235
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 236 PFRAGNEYLIFQKII---------------KLEYDFPAAFFPKARDLVEKLLVLDATKRL 280
Query: 242 TAAE 245
E
Sbjct: 281 GCEE 284
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLMIDQQG-YIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLMIDQQG-YIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 47/250 (18%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
+++ EV+ L +L+HPNI++ LY FE + N YL+ + +
Sbjct: 50 ALLDEVAVLKQLDHPNIMK----------LYEFFEDKRN--YYLV-----------MEVY 86
Query: 74 NSYSLFTTFLLVEEFXXXXXX---XXXXFGTRY------IRRDLKPVNILVDLDGKT--V 122
LF +L ++F GT Y + RDLKP N+L++ + +
Sbjct: 87 RGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 146
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
K+ FGL+ + + G+ +GT YY APE+L +Y D+W G I ++ G P
Sbjct: 147 KIVDFGLS-AHFEVGGKMKERLGTAYYIAPEVLRK--KYDEKCDVWSCGVILYILLCGYP 203
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
F G L R+ + K SF + + L+ ML +P KRI+
Sbjct: 204 PFGGQTDQEILKRV--EKGKFSFD--------PPDWTQVSDEAKQLVKLMLTYEPSKRIS 253
Query: 243 AAEALQQEYF 252
A EAL +
Sbjct: 254 AEEALNHPWI 263
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLMIDQQG-YIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 149 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWTLCGTPEYLAPEIILSK-GYNK 203
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 204 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 257
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G +KV FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLMIDQQG-YIKVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ LDG+ VK++ FG + + VGT Y+ APE++ L Y+T
Sbjct: 163 IHRDIKSDSILLTLDGR-VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSL-YAT 220
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
VDIW +G + EMV G+P + + + + R+ + P K S + + P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL--RDSPPPKLKNSHK---------VSP 269
Query: 224 AGIDLISKMLGMDPDKRITAAEALQQEYF 252
D + +ML DP +R TA E L +
Sbjct: 270 VLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 46 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 99
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 100 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 150
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 151 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 209
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 210 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 254
Query: 242 TAAE 245
E
Sbjct: 255 GCEE 258
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 45 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 98
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 99 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 149
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 150 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 208
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 209 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 253
Query: 242 TAAE 245
E
Sbjct: 254 GCEE 257
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 44 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 97
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 98 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 148
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 149 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 207
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 208 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 252
Query: 242 TAAE 245
E
Sbjct: 253 GCEE 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWTLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLAGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 47 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 100
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 101 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 151
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 152 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 210
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 211 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 255
Query: 242 TAAE 245
E
Sbjct: 256 GCEE 259
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 74 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKN--GELLKY---- 127
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 128 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 178
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 179 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 237
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 238 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 282
Query: 242 TAAE 245
E
Sbjct: 283 GCEE 286
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 51 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 104
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 105 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 155
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 156 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 214
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 215 PFRAGNEYLIFQKIIK---------------LEYDFPEKFFPKARDLVEKLLVLDATKRL 259
Query: 242 TAAE 245
E
Sbjct: 260 GCEE 263
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 104/245 (42%), Gaps = 41/245 (16%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGYSTKN 72
RE L HPNI+RL S+ + Y +F+ ++ + +Y ++ + +
Sbjct: 70 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 129
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLA 130
L + V + RDLKP N+L+ L G VK+A FGLA
Sbjct: 130 ILEAVLHCHQMGV------------------VHRDLKPENLLLASKLKGAAVKLADFGLA 171
Query: 131 KSLYAYKGESSAE---VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+ +GE A GT Y +PE+L Y VD+W G I ++ G P F
Sbjct: 172 IEV---EGEQQAWFGFAGTPGYLSPEVLRKD-PYGKPVDLWACGVILYILLVGYPPFWDE 227
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ +I K D + + + P DLI+KML ++P KRITAAEAL
Sbjct: 228 DQHRLYQQI----------KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL 277
Query: 248 QQEYF 252
+ +
Sbjct: 278 KHPWI 282
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGR------ 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 110 -MKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-MNIKIADFG 158
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + A G Y APEL G VD+W +G I +VSG F G N
Sbjct: 159 FSNE-FTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T + +
Sbjct: 218 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKKFLILNPSKRGTLEQIM 262
Query: 248 QQEY 251
+ +
Sbjct: 263 KDRW 266
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 156 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 210
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 264
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 122
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 123 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 173
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 232
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 233 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
Query: 242 TAAE 245
E
Sbjct: 278 GCEE 281
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 120
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 121 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 171
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 230
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 231 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
Query: 242 TAAE 245
E
Sbjct: 276 GCEE 279
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 156 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 210
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 211 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 122
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 123 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 173
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 232
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 233 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
Query: 242 TAAE 245
E
Sbjct: 278 GCEE 281
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 275 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 330
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 331 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 373
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 374 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 158 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 212
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 213 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 266
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 120
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 121 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 171
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 230
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 231 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
Query: 242 TAAE 245
E
Sbjct: 276 GCEE 279
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 66 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 119
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 120 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 170
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 171 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 229
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 230 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 274
Query: 242 TAAE 245
E
Sbjct: 275 GCEE 278
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 66 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 119
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 120 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMH-IQI 170
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 171 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 229
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 230 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 274
Query: 242 TAAE 245
E
Sbjct: 275 GCEE 278
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 122
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 123 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 173
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 232
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 233 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
Query: 242 TAAE 245
E
Sbjct: 278 GCEE 281
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 123
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 124 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 174
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 175 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 233
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 234 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 278
Query: 242 TAAE 245
E
Sbjct: 279 GCEE 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 70 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 123
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 124 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 174
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 175 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 233
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 234 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 278
Query: 242 TAAE 245
E
Sbjct: 279 GCEE 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 67 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 120
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 121 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 171
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 230
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 231 PFRAGNEYLIFQKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 275
Query: 242 TAAE 245
E
Sbjct: 276 GCEE 279
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 164 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 219 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 272
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+ RE + L+HP ++L LY Y N LLKY +
Sbjct: 79 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---------IRKIG 127
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
S+ T E G I RDLKP NIL++ D +++ FG AK L
Sbjct: 128 SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQITDFGTAKVLS 183
Query: 135 AYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLIT 192
++ A VGT Y +PELL ++ D+W +GCI ++V+G P F N +
Sbjct: 184 PESKQARANXFVGTAQYVSPELLTEKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGLI 242
Query: 193 LGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRITAAE 245
+I+ L FP P DL+ K+L +D KR+ E
Sbjct: 243 FAKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLXGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 316
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 359
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
H E + RE + L+HP ++L LY Y N LLKY
Sbjct: 69 HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN--GELLKY---- 122
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
+ S+ T E G I RDLKP NIL++ D +++
Sbjct: 123 -----IRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNED-MHIQI 173
Query: 125 AGFGLAKSLYAYKGESSAE--VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
FG AK L ++ A VGT Y +PELL ++ D+W +GCI ++V+G P
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLP 232
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLEPAGIDLISKMLGMDPDKRI 241
F N + +I+ L FP P DL+ K+L +D KR+
Sbjct: 233 PFRAGNEGLIFAKII---------------KLEYDFPEKFFPKARDLVEKLLVLDATKRL 277
Query: 242 TAAE 245
E
Sbjct: 278 GCEE 281
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 191
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 234
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 191
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 234
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 184 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 238
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 292
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 191
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 234
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 150 IYRDLKPENLLIDEQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 204
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 205 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 258
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 50/236 (21%)
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT-V 122
SMN Y N + F+ L+ + R I DLKP NIL+ G++ +
Sbjct: 182 SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI 241
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
KV FG S Y ++ + + +Y+APE++LG Y +D+W +GCI E+++G P
Sbjct: 242 KVIDFG--SSCYEHQ-RVYTXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYP 297
Query: 183 LFPGANSLITLG-----------RIVGKSRK----------PSFCKL------------- 208
L PG + L +++ S++ P +C +
Sbjct: 298 LLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 209 -SLRDHLT---------NGFPGL-EPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
S R L N G +P +D + + L DP R+T +AL+ + +
Sbjct: 358 RSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 135 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 190
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 191 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 233
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 184 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 238
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 292
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLL 159
R I RDLK N+ ++ D + VK+ FGLA + Y GE + GT Y APE+L
Sbjct: 136 NRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVL-SKK 192
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+S VD+W +GCI ++ GKP F + T RI + S+ H+
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHIN---- 241
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD--VPGR 258
P LI KML DP R T E L E+F +P R
Sbjct: 242 ---PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 279
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLL 159
R I RDLK N+ ++ D + VK+ FGLA + Y GE + GT Y APE+L
Sbjct: 136 NRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVL-SKK 192
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+S VD+W +GCI ++ GKP F + T RI + S+ H+
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHIN---- 241
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD--VPGR 258
P LI KML DP R T E L E+F +P R
Sbjct: 242 ---PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 279
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT-V 122
SMN Y N + F+ L+ + R I DLKP NIL+ G++ +
Sbjct: 182 SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI 241
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
KV FG S Y ++ + + +Y+APE++LG Y +D+W +GCI E+++G P
Sbjct: 242 KVIDFG--SSCYEHQ-RVYTXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYP 297
Query: 183 LFPGANS 189
L PG +
Sbjct: 298 LLPGEDE 304
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL-AYLLKYPKDSMNGYSTKNFNS 75
RE+S L L HP+II+L V + + V EY +L Y+++ K M + F
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVE--KKRMTEDEGRRF-- 113
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
F + E+ + + RDLKP N+L+D D VK+A FGL+ ++
Sbjct: 114 ---FQQIICAIEYCHRH---------KIVHRDLKPENLLLD-DNLNVKIADFGLS-NIMT 159
Query: 136 YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGR 195
G+ Y APE++ G L VD+W G + M+ G+ P + I
Sbjct: 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR--LPFDDEFIP--- 214
Query: 196 IVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+K + C + D L+ P LI +M+ DP +RIT E + +F
Sbjct: 215 --NLFKKVNSCVYVMPDFLS-------PGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 104 IRRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS---AEVGTHYYKAPELLL-- 156
I RDLKP N+L+ + +K+ FG +K L GE+S GT Y APE+L+
Sbjct: 142 IHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLCGTPTYLAPEVLVSV 197
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
G Y+ AVD W +G I +SG P F + ++SL+D +T+
Sbjct: 198 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-----------------QVSLKDQITS 240
Query: 217 G--------FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
G + + +DL+ K+L +DP R T EAL+ + +D
Sbjct: 241 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 85/195 (43%), Gaps = 54/195 (27%)
Query: 107 DLKPVNIL-------------VDLDGKT-----VKVAGFGLAKSLYAYKGES-SAEVGTH 147
DLKP NIL + D +T +KV FG A Y E S V T
Sbjct: 143 DLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA----TYDDEHHSTLVSTR 198
Query: 148 YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS---LITLGRIVG------ 198
+Y+APE++L L +S D+W +GCI E G +FP +S L + RI+G
Sbjct: 199 HYRAPEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257
Query: 199 --KSRKPSFC---KLSLRDHLTNG---FPGLEPAG-------------IDLISKMLGMDP 237
K+RK + +L +H + G +P DLI KML DP
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317
Query: 238 DKRITAAEALQQEYF 252
KRIT EAL+ +F
Sbjct: 318 AKRITLREALKHPFF 332
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 184 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGATWTLCGTPEYLAPEIILSK-GYNK 238
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 292
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLL 159
R I RDLK N+ ++ D + VK+ FGLA + Y GE + GT Y APE+L
Sbjct: 140 NRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVL-SKK 196
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+S VD+W +GCI ++ GKP F + T RI + S+ H+
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHIN---- 245
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD--VPGR 258
P LI KML DP R T E L E+F +P R
Sbjct: 246 ---PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 283
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLMIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 50/236 (21%)
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT-V 122
SMN Y N + F+ L+ + R I DLKP NIL+ G++ +
Sbjct: 182 SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGI 241
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
KV FG S Y ++ + + +Y+APE++LG Y +D+W +GCI E+++G P
Sbjct: 242 KVIDFG--SSCYEHQ-RVYXXIQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYP 297
Query: 183 LFPGANSLITLG-----------RIVGKSRK----------PSFCKL------------- 208
L PG + L +++ S++ P +C +
Sbjct: 298 LLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 209 -SLRDHLT---------NGFPGL-EPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
S R L N G +P +D + + L DP R+T +AL+ + +
Sbjct: 358 RSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 43/261 (16%)
Query: 4 IHNTMEGVPSSMIR-EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQ-----VNDLAYL 57
I+ VP I E+ L L+HPNII++ V +Y V E + +
Sbjct: 55 INKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSA 114
Query: 58 LKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYI-RRDLKPVNILVD 116
K GY V E F ++++ +DLKP NIL
Sbjct: 115 QARGKALSEGY----------------VAELMKQMMNALAYFHSQHVVHKDLKPENILFQ 158
Query: 117 LDG--KTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIF 174
+K+ FGLA+ L+ S+ GT Y APE+ + + DIW G +
Sbjct: 159 DTSPHSPIKIIDFGLAE-LFKSDEHSTNAAGTALYMAPEVFKRDVTFK--CDIWSAGVVM 215
Query: 175 GEMVSGKPLFPGANSLITLGRIVGKS--RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKM 232
+++G F G +L + K+ ++P++ + R L P +DL+ +M
Sbjct: 216 YFLLTGCLPFTGT----SLEEVQQKATYKEPNYA-VECR--------PLTPQAVDLLKQM 262
Query: 233 LGMDPDKRITAAEALQQEYFK 253
L DP++R +AA+ L E+FK
Sbjct: 263 LTKDPERRPSAAQVLHHEWFK 283
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGR------ 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 110 -MKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-MNIKIADFG 158
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + G+ Y APEL G VD+W +G I +VSG F G N
Sbjct: 159 FSNE-FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T + +
Sbjct: 218 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKKFLILNPSKRGTLEQIM 262
Query: 248 QQEY 251
+ +
Sbjct: 263 KDRW 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGR------ 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 110 -MKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-MNIKIADFG 158
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + G+ Y APEL G VD+W +G I +VSG F G N
Sbjct: 159 FSNE-FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T + +
Sbjct: 218 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKKFLILNPSKRGTLEQIM 262
Query: 248 QQEY 251
+ +
Sbjct: 263 KDRW 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGR------ 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 110 -MKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-MNIKIADFG 158
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + G+ Y APEL G VD+W +G I +VSG F G N
Sbjct: 159 FSNE-FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T + +
Sbjct: 218 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKKFLILNPSKRGTLEQIM 262
Query: 248 QQEY 251
+ +
Sbjct: 263 KDRW 266
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLL 159
R I RDLK N+ ++ D + VK+ FGLA + Y GE + GT Y APE+L
Sbjct: 134 NRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVL-SKK 190
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+S VD+W +GCI ++ GKP F + T RI +K + S+ H+
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----KKNEY---SIPKHIN---- 239
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD--VPGR 258
P LI KML DP R T E L E+F +P R
Sbjct: 240 ---PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 277
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGR------ 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 110 -MKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-MNIKIADFG 158
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + G+ Y APEL G VD+W +G I +VSG F G N
Sbjct: 159 FSNE-FTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T + +
Sbjct: 218 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKKFLILNPSKRGTLEQIM 262
Query: 248 QQEY 251
+ +
Sbjct: 263 KDRW 266
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + +M +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLL 159
R I RDLK N+ ++ D + VK+ FGLA + Y GE + GT Y APE+L
Sbjct: 158 NRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVL-SKK 214
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+S VD+W +GCI ++ GKP F + T RI + S+ H+
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHIN---- 263
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD--VPGR 258
P LI KML DP R T E L E+F +P R
Sbjct: 264 ---PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 301
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLL 159
R I RDLK N+ ++ D + VK+ FGLA + Y GE + GT Y APE+L
Sbjct: 160 NRVIHRDLKLGNLFLNEDLE-VKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVL-SKK 216
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+S VD+W +GCI ++ GKP F + T RI + S+ H+
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-------EYSIPKHIN---- 265
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKD--VPGR 258
P LI KML DP R T E L E+F +P R
Sbjct: 266 ---PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPAR 303
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + G+
Sbjct: 51 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAH------GW 102
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 103 -MKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-MNIKIADFG 151
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + G+ Y APEL G VD+W +G I +VSG F G N
Sbjct: 152 FSNE-FTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T + +
Sbjct: 211 LKELRERVLRGKYRIPFYMSTDCE---------------NLLKKFLILNPSKRGTLEQIM 255
Query: 248 QQEY 251
+ +
Sbjct: 256 KDRW 259
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 41/245 (16%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGYSTKN 72
RE L HPNI+RL S+ + Y +F+ ++ + +Y ++ + +
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQ 118
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLA 130
L + V + R+LKP N+L+ L G VK+A FGLA
Sbjct: 119 ILEAVLHCHQMGV------------------VHRNLKPENLLLASKLKGAAVKLADFGLA 160
Query: 131 KSLYAYKGESSAE---VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+ +GE A GT Y +PE+L Y VD+W G I ++ G P F
Sbjct: 161 IEV---EGEQQAWFGFAGTPGYLSPEVLRKD-PYGKPVDLWACGVILYILLVGYPPFWDE 216
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ +I K D + + + P DLI+KML ++P KRITAAEAL
Sbjct: 217 DQHRLYQQI----------KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL 266
Query: 248 QQEYF 252
+ +
Sbjct: 267 KHPWI 271
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 36/252 (14%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+I+E+S + + + P++++ + L+ V EY V+D+ L N
Sbjct: 69 QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL-------RNKT 121
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
T++ + L +T +E R I RD+K NIL++ +G K+A FG
Sbjct: 122 LTEDEIATILQSTLKGLEYLHFM----------RKIHRDIKAGNILLNTEGHA-KLADFG 170
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+A L + + +GT ++ APE++ + Y+ DIW +G EM GKP + +
Sbjct: 171 VAGQLTDXMAKRNXVIGTPFWMAPEVIQE-IGYNCVADIWSLGITAIEMAEGKPPYADIH 229
Query: 189 SLITLGRIVGKSRKPSFCKLSL-RDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ + ++ + P+F K L D+ T D + + L P++R TA + L
Sbjct: 230 PMRAIF-MIPTNPPPTFRKPELWSDNFT-----------DFVKQCLVKSPEQRATATQLL 277
Query: 248 QQEYFKDVPGRS 259
Q + + G S
Sbjct: 278 QHPFVRSAKGVS 289
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+++D G ++V FG AK + KG + GT Y APE+++ Y+
Sbjct: 163 IYRDLKPENLIIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPEIIISK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
+EG SM E++ L ++ HPNI+ L + G +LY + Q+ L + +
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM--QLVSGGEL--FDRIVE 109
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL---VDLDGKTV 122
G+ T+ S +F V+ + RDLKP N+L +D D K +
Sbjct: 110 KGFYTERDASRLIFQVLDAVKYLHDLGI----------VHRDLKPENLLYYSLDEDSK-I 158
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
++ FGL+K S+A GT Y APE+L YS AVD W +G I ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
F N +I+ + + + + + D I ++ DP+KR T
Sbjct: 217 PFYDENDAKLFEQILKAEYEFD----------SPYWDDISDSAKDFIRHLMEKDPEKRFT 266
Query: 243 AAEALQQEYF 252
+ALQ +
Sbjct: 267 CEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 30/249 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
+EG SM E++ L ++ HPNI+ L + G +LY + Q+ L + +
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM--QLVSGGEL--FDRIVE 109
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL---VDLDGKTV 122
G+ T+ S +F V+ + RDLKP N+L +D D K +
Sbjct: 110 KGFYTERDASRLIFQVLDAVKYLHDLGI----------VHRDLKPENLLYYSLDEDSK-I 158
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
++ FGL+K S+A GT Y APE+L YS AVD W +G I ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
F N +I+ + + + + + D I ++ DP+KR T
Sbjct: 217 PFYDENDAKLFEQILKAEYEFD----------SPYWDDISDSAKDFIRHLMEKDPEKRFT 266
Query: 243 AAEALQQEY 251
+ALQ +
Sbjct: 267 CEQALQHPW 275
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 99/244 (40%), Gaps = 40/244 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 58 QKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFD--YLVAHGR------ 109
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + + F + ++ + RDLK N+L+D D +K+A FG
Sbjct: 110 -XKEKEARAKFRQIVSAVQYCHQKFI---------VHRDLKAENLLLDAD-XNIKIADFG 158
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + + + A G Y APEL G VD+W +G I +VSG F G N
Sbjct: 159 FSNE-FTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
Query: 189 SLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
R++ GK R P + +L+ K L ++P KR T +
Sbjct: 218 LKELRERVLRGKYRIPFYXSTDCE---------------NLLKKFLILNPSKRGTLEQIX 262
Query: 248 QQEY 251
+ +
Sbjct: 263 KDRW 266
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
+EG SM E++ L ++ HPNI+ L + G +LY + Q+ L + +
Sbjct: 54 EALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM--QLVSGGEL--FDRIVE 109
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL---VDLDGKTV 122
G+ T+ S +F V+ + RDLKP N+L +D D K +
Sbjct: 110 KGFYTERDASRLIFQVLDAVKYLHDLGI----------VHRDLKPENLLYYSLDEDSK-I 158
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
++ FGL+K S+A GT Y APE+L YS AVD W +G I ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
F N +I+ + + + + + D I ++ DP+KR T
Sbjct: 217 PFYDENDAKLFEQILKAEYEFD----------SPYWDDISDSAKDFIRHLMEKDPEKRFT 266
Query: 243 AAEALQQEYF 252
+ALQ +
Sbjct: 267 CEQALQHPWI 276
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT Y AP ++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEYLAPAIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
+EG SM E++ L ++ HPNI+ L + G +LY + Q+ L + +
Sbjct: 54 KALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM--QLVSGGEL--FDRIVE 109
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL---VDLDGKTV 122
G+ T+ S +F V+ + RDLKP N+L +D D K +
Sbjct: 110 KGFYTERDASRLIFQVLDAVKYLHDLGI----------VHRDLKPENLLYYSLDEDSK-I 158
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKP 182
++ FGL+K S+A GT Y APE+L YS AVD W +G I ++ G P
Sbjct: 159 MISDFGLSKMEDPGSVLSTA-CGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 183 LFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRIT 242
F N +I+ + + + + + D I ++ DP+KR T
Sbjct: 217 PFYDENDAKLFEQILKAEYEFD----------SPYWDDISDSAKDFIRHLMEKDPEKRFT 266
Query: 243 AAEALQQEYF 252
+ALQ +
Sbjct: 267 CEQALQHPWI 276
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEY-QVNDLAYLLKYPKDSMNGYSTKNFNS 75
REV+ L + HPNI++ + LY V +Y + DL + N
Sbjct: 72 REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL-------------FKRINAQK 118
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
LF +++ F + + RD+K NI + DG TV++ FG+A+ L +
Sbjct: 119 GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNS 177
Query: 136 YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGR 195
+ A +GT YY +PE+ Y+ DIW +GC+ E+ + K F + + +
Sbjct: 178 TVELARACIGTPYYLSPEICEN-KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLK 236
Query: 196 IVGKSRKP 203
I+ S P
Sbjct: 237 IISGSFPP 244
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 84/195 (43%), Gaps = 54/195 (27%)
Query: 107 DLKPVNIL-------------VDLDGKT-----VKVAGFGLAKSLYAYKGES-SAEVGTH 147
DLKP NIL + D +T +KV FG A Y E S V
Sbjct: 143 DLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA----TYDDEHHSTLVXXR 198
Query: 148 YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS---LITLGRIVG------ 198
+Y+APE++L L +S D+W +GCI E G +FP +S L + RI+G
Sbjct: 199 HYRAPEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257
Query: 199 --KSRKPSFC---KLSLRDHLTNG---FPGLEPAG-------------IDLISKMLGMDP 237
K+RK + +L +H + G +P DLI KML DP
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317
Query: 238 DKRITAAEALQQEYF 252
KRIT EAL+ +F
Sbjct: 318 AKRITLREALKHPFF 332
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGL 158
R I RDLK N+ ++ D VK+ FGLA + + GE ++ GT Y APE+L
Sbjct: 144 NNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
+S VDIW +GCI ++ GKP F + T RI + S+ H+
Sbjct: 202 -GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-------EYSVPRHIN--- 250
Query: 219 PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P LI +ML DP R + AE L E+F
Sbjct: 251 ----PVASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 101/245 (41%), Gaps = 39/245 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGYSTKNFN 74
RE+ L HP+II+L +V S ++ V EY Y+ K NG +
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK------NGRLDEK-E 117
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
S LF L ++ + RDLKP N+L+D K+A FGL+ +
Sbjct: 118 SRRLFQQILSGVDYCHRHMV---------VHRDLKPENVLLDA-HMNAKIADFGLSNMMS 167
Query: 135 AYKGES-SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITL 193
GE G+ Y APE++ G L VDIW G I ++ G F +
Sbjct: 168 --DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF 225
Query: 194 GRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+I G P + L P+ I L+ ML +DP KR T + + E+F
Sbjct: 226 KKICDGIFYTPQY---------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
Query: 253 K-DVP 256
K D+P
Sbjct: 271 KQDLP 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGL 158
R I RDLK N+ ++ D VK+ FGLA + + GE ++ GT Y APE+L
Sbjct: 160 NNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
+S VDIW +GCI ++ GKP F + T RI + S+ H+
Sbjct: 218 -GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-------EYSVPRHIN--- 266
Query: 219 PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P LI +ML DP R + AE L E+F
Sbjct: 267 ----PVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D G ++V FG AK + KG + GT APE++L Y+
Sbjct: 163 IYRDLKPENLLIDQQG-YIQVTDFGFAKRV---KGRTWXLCGTPEALAPEIILSK-GYNK 217
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV-GKSRKPSFCKLSLRDHLTN 216
AVD W +G + EM +G P F + +IV GK R PS L+D L N
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGYSTKNFNSYSLFTTFL 83
HPNII L V G Y+Y V E L +L+ + ++ S LFT
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR------QKFFSEREASAVLFTITK 127
Query: 84 LVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL-VDLDG--KTVKVAGFGLAKSLYAYKGES 140
VE + RDLKP NIL VD G +++++ FG AK L A G
Sbjct: 128 TVEYL----------HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 141 SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG-KPLFPGANSLITLGRIVGK 199
T + APE+L Y A DIW +G + ++G P G + T I+ +
Sbjct: 178 XTPCYTANFVAPEVL-ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDD--TPEEILAR 234
Query: 200 SRKPSFCKLSLRDHLTNGF-PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
F L+ G+ + DL+SK L +DP +R+TAA L+ +
Sbjct: 235 IGSGKFS-------LSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 59/254 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFE----------------YQVNDLAYLLKY 60
RE L HPNI+RL S+ + Y VF+ Y D ++ ++
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 61 PKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLD 118
+S+N + RDLKP N+L+
Sbjct: 112 ILESVNHCHLNGI------------------------------VHRDLKPENLLLASKSK 141
Query: 119 GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
G VK+A FGLA + + GT Y +PE+L Y VD+W G I ++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD-PYGKPVDMWACGVILYILL 200
Query: 179 SGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPD 238
G P F + +I K D + + + P DLI+KML ++P
Sbjct: 201 VGYPPFWDEDQHRLYQQI----------KAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 239 KRITAAEALQQEYF 252
KRITA+EAL+ +
Sbjct: 251 KRITASEALKHPWI 264
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 105 RRDLKPVNILVDLDGK-TVKVAGFGLAKSLYAYK-GE---SSAEVGTHYYKAPELLLGLL 159
RD+KP N L + +K+ FGL+K Y GE + + GT Y+ APE+L
Sbjct: 191 HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250
Query: 160 E-YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
E Y D W G + ++ G FPG N T+ +++ K KL + +
Sbjct: 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK-------KLCFEN---PNY 300
Query: 219 PGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
L P DL+S +L + D+R A ALQ +
Sbjct: 301 NVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 59/254 (23%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFE----------------YQVNDLAYLLKY 60
RE L HPNI+RL S+ + Y VF+ Y D ++ ++
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 61 PKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLD 118
+S+N + RDLKP N+L+
Sbjct: 112 ILESVNHCHLNGI------------------------------VHRDLKPENLLLASKSK 141
Query: 119 GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
G VK+A FGLA + + GT Y +PE+L Y VD+W G I ++
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKD-PYGKPVDMWACGVILYILL 200
Query: 179 SGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPD 238
G P F + +I K D + + + P DLI+KML ++P
Sbjct: 201 VGYPPFWDEDQHRLYQQI----------KAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 239 KRITAAEALQQEYF 252
KRITA+EAL+ +
Sbjct: 251 KRITASEALKHPWI 264
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ +K++ FG + + VGT Y+ APE++ L Y T
Sbjct: 163 IHRDIKSDSILLTSDGR-IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI-SRLPYGT 220
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
VDIW +G + EM+ G+P + L + RI S P L + GF
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGF----- 274
Query: 224 AGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+DL ML +P +R TA E L + K
Sbjct: 275 --LDL---MLVREPSQRATAQELLGHPFLK 299
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E + L E+ HP I+ L+ G LY + EY ++ ++ ++ + T
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEY-LSGGELFMQLEREGIFMEDT------- 122
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
F L E I RDLKP NI+++ G VK+ FGL K
Sbjct: 123 --ACFYLAE----ISMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDG 175
Query: 138 GESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
+ GT Y APE+L+ ++ AVD W +G + +M++G P F G N T+ +I+
Sbjct: 176 TVTHTFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
CKL+L +LT DL+ K+L + R+ A
Sbjct: 235 K-------CKLNLPPYLTQ-------EARDLLKKLLKRNAASRLGAG 267
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGL 158
R I RDLK N+ ++ D VK+ FGLA + + GE + GT Y APE+L
Sbjct: 160 NNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
+S VDIW +GCI ++ GKP F + T RI + S+ H+
Sbjct: 218 -GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-------EYSVPRHIN--- 266
Query: 219 PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P LI +ML DP R + AE L E+F
Sbjct: 267 ----PVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGL 158
R I RDLK N+ ++ D VK+ FGLA + + GE + GT Y APE+L
Sbjct: 160 NNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
+S VDIW +GCI ++ GKP F + T RI + S+ H+
Sbjct: 218 -GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN-------EYSVPRHIN--- 266
Query: 219 PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P LI +ML DP R + AE L E+F
Sbjct: 267 ----PVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 13 SSMIREVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
+ ++EV L +++ HPNII+L + + VF+ + K +++ T+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 127
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
L L + RDLKP NIL+D D +K+ FG +
Sbjct: 128 KIMRALLEVICAL--------------HKLNIVHRDLKPENILLD-DDMNIKLTDFGFSC 172
Query: 132 SLYAYKGESSAEV-GTHYYKAPELLLGLLE-----YSTAVDIWPVGCIFGEMVSGKPLFP 185
L GE EV GT Y APE++ + Y VD+W G I +++G P F
Sbjct: 173 QLDP--GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
Query: 186 GANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAE 245
++ L I+ + + F D+ DL+S+ L + P KR TA E
Sbjct: 231 HRKQMLMLRMIMSGNYQ--FGSPEWDDY--------SDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 246 ALQQEYFK 253
AL +F+
Sbjct: 281 ALAHPFFQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 13 SSMIREVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
+ ++EV L +++ HPNII+L + + VF+ + K +++ T+
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 114
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
+L + + + RDLKP NIL+D D +K+ FG +
Sbjct: 115 KIMR-ALLEVICALHKL-------------NIVHRDLKPENILLD-DDMNIKLTDFGFSC 159
Query: 132 SLYAYKGESSAEV-GTHYYKAPELLLGLLE-----YSTAVDIWPVGCIFGEMVSGKPLFP 185
L GE EV GT Y APE++ + Y VD+W G I +++G P F
Sbjct: 160 QLDP--GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 217
Query: 186 GANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAE 245
++ L I+ + + F D+ DL+S+ L + P KR TA E
Sbjct: 218 HRKQMLMLRMIMSGNYQ--FGSPEWDDY--------SDTVKDLVSRFLVVQPQKRYTAEE 267
Query: 246 ALQQEYFK 253
AL +F+
Sbjct: 268 ALAHPFFQ 275
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E + L E+ HP I+ L+ G LY + EY ++ ++ ++ + T
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEY-LSGGELFMQLEREGIFMEDT------- 122
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
F L E I RDLKP NI+++ G VK+ FGL K
Sbjct: 123 --ACFYLAE----ISMALGHLHQKGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDG 175
Query: 138 GESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
+ GT Y APE+L+ ++ AVD W +G + +M++G P F G N T+ +I+
Sbjct: 176 TVTHXFCGTIEYMAPEILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
CKL+L +LT DL+ K+L + R+ A
Sbjct: 235 K-------CKLNLPPYLTQ-------EARDLLKKLLKRNAASRLGAG 267
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 35/241 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM-NGYSTKNFNS 75
RE L HPNI+RL S+ + Y VF DL + +D + Y ++ S
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVF-----DLVTGGELFEDIVAREYYSEADAS 133
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL 133
+ + V + RDLKP N+L+ G VK+A FGLA +
Sbjct: 134 HCIHQILESVNHIHQHDI----------VHRDLKPENLLLASKCKGAAVKLADFGLAIEV 183
Query: 134 YAYKGESSAE---VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
+GE A GT Y +PE+L Y VDIW G I ++ G P F +
Sbjct: 184 ---QGEQQAWFGFAGTPGYLSPEVLRK-DPYGKPVDIWACGVILYILLVGYPPFWDEDQH 239
Query: 191 ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQE 250
+I K D + + + P +LI++ML ++P KRITA +AL+
Sbjct: 240 KLYQQI----------KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHP 289
Query: 251 Y 251
+
Sbjct: 290 W 290
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ VK++ FG + VGT Y+ APEL+ L Y
Sbjct: 147 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 204
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE- 222
VDIW +G + EMV G+P + L + I RD+L L
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 250
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ + ++L DP +R TAAE L+ +
Sbjct: 251 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 98/232 (42%), Gaps = 31/232 (13%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGYSTKNFNSYSLFTTFL 83
HPNII L V G ++Y V E L +L+ + ++ S+ L T
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR------QKFFSEREASFVLHTIGK 132
Query: 84 LVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL-VDLDG--KTVKVAGFGLAKSLYAYKGES 140
VE + RDLKP NIL VD G + +++ FG AK L A G
Sbjct: 133 TVEYLHSQGV----------VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 141 SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKS 200
T + APE+L Y DIW +G + M++G F S T I+ +
Sbjct: 183 MTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS-DTPEEILTRI 240
Query: 201 RKPSFCKLSLRDHLTNG-FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
F L+ G + + DL+SKML +DP +R+TA + LQ +
Sbjct: 241 GSGKFT-------LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 98/232 (42%), Gaps = 31/232 (13%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGYSTKNFNSYSLFTTFL 83
HPNII L V G ++Y V E L +L+ + ++ S+ L T
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR------QKFFSEREASFVLHTIGK 132
Query: 84 LVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL-VDLDG--KTVKVAGFGLAKSLYAYKGES 140
VE + RDLKP NIL VD G + +++ FG AK L A G
Sbjct: 133 TVEYLHSQGV----------VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 141 SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKS 200
T + APE+L Y DIW +G + M++G F S T I+ +
Sbjct: 183 MTPCYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS-DTPEEILTRI 240
Query: 201 RKPSFCKLSLRDHLTNG-FPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
F L+ G + + DL+SKML +DP +R+TA + LQ +
Sbjct: 241 GSGKFT-------LSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ VK++ FG + VGT Y+ APEL+ L Y
Sbjct: 149 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 206
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE- 222
VDIW +G + EMV G+P + L + I RD+L L
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 252
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ + ++L DP +R TAAE L+ +
Sbjct: 253 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ VK++ FG + VGT Y+ APEL+ L Y
Sbjct: 142 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 199
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE- 222
VDIW +G + EMV G+P + L + I RD+L L
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 245
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ + ++L DP +R TAAE L+ +
Sbjct: 246 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ VK++ FG + VGT Y+ APEL+ L Y
Sbjct: 192 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 249
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE- 222
VDIW +G + EMV G+P + L + I RD+L L
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 295
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ + ++L DP +R TAAE L+ +
Sbjct: 296 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGYSTKN 72
+E+ + L+HPNIIRL +Y V E ++ + + ++S K+
Sbjct: 55 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 114
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL--VDLDGKTVKVAGFGLA 130
S + L V RDLKP N L D +K+ FGLA
Sbjct: 115 VLSAVAYCHKLNV------------------AHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
Query: 131 KSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
K + +VGT YY +P++L GL Y D W G + ++ G P F S
Sbjct: 157 ARFKPGKMMRT-KVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPF----SA 209
Query: 191 ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQE 250
T ++ K R+ +F +D L + P LI ++L P +RIT+ +AL+ E
Sbjct: 210 PTDXEVMLKIREGTFT-FPEKDWL-----NVSPQAESLIRRLLTKSPKQRITSLQALEHE 263
Query: 251 YFK 253
+F+
Sbjct: 264 WFE 266
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ VK++ FG + VGT Y+ APEL+ L Y
Sbjct: 138 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 195
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE- 222
VDIW +G + EMV G+P + L + I RD+L L
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 241
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ + ++L DP +R TAAE L+ +
Sbjct: 242 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RD+K +IL+ DG+ VK++ FG + VGT Y+ APEL+ L Y
Sbjct: 269 IHRDIKSDSILLTHDGR-VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGP 326
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE- 222
VDIW +G + EMV G+P + L + I RD+L L
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHK 372
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ + ++L DP +R TAAE L+ +
Sbjct: 373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D DG V+++ GLA L A + ++ GT + APELLLG EY
Sbjct: 311 IYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
+VD + +G EM++ + F R G+ + K + + P
Sbjct: 369 SVDYFALGVTLYEMIAARGPF----------RARGEKVENKELKQRVLEQAVTYPDKFSP 418
Query: 224 AGIDLISKMLGMDPDKRI 241
A D +L DP+KR+
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D DG V+++ GLA L A + ++ GT + APELLLG EY
Sbjct: 311 IYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
+VD + +G EM++ + F R G+ + K + + P
Sbjct: 369 SVDYFALGVTLYEMIAARGPF----------RARGEKVENKELKQRVLEQAVTYPDKFSP 418
Query: 224 AGIDLISKMLGMDPDKRI 241
A D +L DP+KR+
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D DG V+++ GLA L A + ++ GT + APELLLG EY
Sbjct: 311 IYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
+VD + +G EM++ + F R G+ + K + + P
Sbjct: 369 SVDYFALGVTLYEMIAARGPF----------RARGEKVENKELKQRVLEQAVTYPDKFSP 418
Query: 224 AGIDLISKMLGMDPDKRI 241
A D +L DP+KR+
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGYSTKN 72
+E+ + L+HPNIIRL +Y V E ++ + + ++S K+
Sbjct: 72 QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD 131
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL--VDLDGKTVKVAGFGLA 130
S + L V RDLKP N L D +K+ FGLA
Sbjct: 132 VLSAVAYCHKLNV------------------AHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
Query: 131 KSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
K + +VGT YY +P++L GL Y D W G + ++ G P F S
Sbjct: 174 ARFKPGKMMRT-KVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPF----SA 226
Query: 191 ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQE 250
T ++ K R+ +F +D L + P LI ++L P +RIT+ +AL+ E
Sbjct: 227 PTDXEVMLKIREGTFT-FPEKDWL-----NVSPQAESLIRRLLTKSPKQRITSLQALEHE 280
Query: 251 YFK 253
+F+
Sbjct: 281 WFE 283
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP N+L+D DG V+++ GLA L A + ++ GT + APELLLG EY
Sbjct: 311 IYRDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLG-EEYDF 368
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
+VD + +G EM++ + F R G+ + K + + P
Sbjct: 369 SVDYFALGVTLYEMIAARGPF----------RARGEKVENKELKQRVLEQAVTYPDKFSP 418
Query: 224 AGIDLISKMLGMDPDKRI 241
A D +L DP+KR+
Sbjct: 419 ASKDFCEALLQKDPEKRL 436
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK NIL+D DG +K+A FG+ K +++ GT Y APE+LLG +Y+
Sbjct: 141 VYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNH 198
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF--PGL 221
+VD W G + EM+ G+ F G + I + N F L
Sbjct: 199 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI----------------RMDNPFYPRWL 242
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQ 249
E DL+ K+ +P+KR+ ++Q
Sbjct: 243 EKEAKDLLVKLFVREPEKRLGVRGDIRQ 270
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 98/245 (40%), Gaps = 39/245 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGYSTKNFN 74
RE+ L HP+II+L +V S + V EY Y+ K+ + +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-------VEEME 112
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ LF L ++ + RDLKP N+L+D K+A FGL+ +
Sbjct: 113 ARRLFQQILSAVDYCHRHMV---------VHRDLKPENVLLDAH-MNAKIADFGLSNMMS 162
Query: 135 AYKGES-SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITL 193
GE G+ Y APE++ G L VDIW G I ++ G F +
Sbjct: 163 --DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF 220
Query: 194 GRIVGKS-RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+I G P + S+ L+ ML +DP KR T + + E+F
Sbjct: 221 KKIRGGVFYIPEYLNRSV---------------ATLLMHMLQVDPLKRATIKDIREHEWF 265
Query: 253 K-DVP 256
K D+P
Sbjct: 266 KQDLP 270
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK NIL+D DG +K+A FG+ K +++ GT Y APE+LLG +Y+
Sbjct: 140 VYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QKYNH 197
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF--PGL 221
+VD W G + EM+ G+ F G + I + N F L
Sbjct: 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI----------------RMDNPFYPRWL 241
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQ 249
E DL+ K+ +P+KR+ ++Q
Sbjct: 242 EKEAKDLLVKLFVREPEKRLGVRGDIRQ 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 27/199 (13%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY----QVNDLAYLLKYPKDSMNGY 68
+ REV + LNHPNI++L V LY V EY +V D YL+ + +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD--YLVAHGR------ 110
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYI-RRDLKPVNILVDLDGKTVKVAGF 127
K + + F + ++ +YI RDLK N+L+D D +K+A F
Sbjct: 111 -MKEKEARAKFRQIVSAVQYCH----------QKYIVHRDLKAENLLLDGD-MNIKIADF 158
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
G + + + G+ Y APEL G VD+W +G I +VSG F G
Sbjct: 159 GFSNE-FTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
Query: 188 NSLITLGRIV-GKSRKPSF 205
N R++ GK R P +
Sbjct: 218 NLKELRERVLRGKYRIPFY 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 26/230 (11%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY-QVNDLAYLLKYPKDSMNGYSTK 71
+ I+E+ L +LNHPN+I+ + L V E DL+ ++K+ K +
Sbjct: 77 ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
Y F R + RD+KP N+ + G VK+ GL +
Sbjct: 137 TVWKY-----------FVQLCSALEHMHSRRVMHRDIKPANVFITATG-VVKLGDLGLGR 184
Query: 132 SLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
+ + + VGT YY +PE + Y+ DIW +GC+ EM + P + +L
Sbjct: 185 FFSSKTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 243
Query: 191 ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKR 240
+L + + + P DH + L++ + DP+KR
Sbjct: 244 YSLCKKIEQCDYPPL----PSDHYSEELR-------QLVNMCINPDPEKR 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 95/246 (38%), Gaps = 34/246 (13%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGV + RE+ L HPNI+R+ +Y + E+ + G
Sbjct: 56 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF--------------APRGE 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + F + I RD+KP N+L+ G+ +K+A FG
Sbjct: 102 LYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-LKIADFG 160
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
S++A GT Y PE++ G + VD+W G + E + G P F +
Sbjct: 161 W--SVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPS 217
Query: 189 SLITLGRIVGKSRK-PSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
T RIV K P F L++G DLISK+L P +R+ +
Sbjct: 218 HTETHRRIVNVDLKFPPF--------LSDG-------SKDLISKLLRYHPPQRLPLKGVM 262
Query: 248 QQEYFK 253
+ + K
Sbjct: 263 EHPWVK 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 95/246 (38%), Gaps = 34/246 (13%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGV + RE+ L HPNI+R+ +Y + E+ + G
Sbjct: 55 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF--------------APRGE 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + F + I RD+KP N+L+ G+ +K+A FG
Sbjct: 101 LYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-LKIADFG 159
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
S++A GT Y PE++ G + VD+W G + E + G P F +
Sbjct: 160 W--SVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
Query: 189 SLITLGRIVGKSRK-PSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
T RIV K P F L++G DLISK+L P +R+ +
Sbjct: 217 HTETHRRIVNVDLKFPPF--------LSDG-------SKDLISKLLRYHPPQRLPLKGVM 261
Query: 248 QQEYFK 253
+ + K
Sbjct: 262 EHPWVK 267
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 101/251 (40%), Gaps = 39/251 (15%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVND--LAYLLKYPKDSMNGY 68
V + RE+ L HP+II+L +V S + V EY Y+ K+ +
Sbjct: 54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR------ 107
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
+ + LF L ++ + RDLKP N+L+D K+A FG
Sbjct: 108 -VEEMEARRLFQQILSAVDYCHRHMV---------VHRDLKPENVLLDAH-MNAKIADFG 156
Query: 129 LAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
L+ + GE + G+ Y APE++ G L VDIW G I ++ G F
Sbjct: 157 LSNMMS--DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
Query: 188 NSLITLGRIVGKS-RKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEA 246
+ +I G P + S+ L+ ML +DP KR T +
Sbjct: 215 HVPTLFKKIRGGVFYIPEYLNRSV---------------ATLLMHMLQVDPLKRATIKDI 259
Query: 247 LQQEYFK-DVP 256
+ E+FK D+P
Sbjct: 260 REHEWFKQDLP 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 34/248 (13%)
Query: 13 SSMIREVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
+ ++EV L +++ HPNII+L + + VF+ + K +++ T+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR 127
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
+L + + + RDLKP NIL+D D +K+ FG +
Sbjct: 128 KIMR-ALLEVICALHKL-------------NIVHRDLKPENILLD-DDMNIKLTDFGFSC 172
Query: 132 SLYAYKGESSAEV-GTHYYKAPELLLGLLE-----YSTAVDIWPVGCIFGEMVSGKPLFP 185
L GE V GT Y APE++ + Y VD+W G I +++G P F
Sbjct: 173 QLDP--GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
Query: 186 GANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAE 245
++ L I+ + + F D+ DL+S+ L + P KR TA E
Sbjct: 231 HRKQMLMLRMIMSGNYQ--FGSPEWDDY--------SDTVKDLVSRFLVVQPQKRYTAEE 280
Query: 246 ALQQEYFK 253
AL +F+
Sbjct: 281 ALAHPFFQ 288
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 95/246 (38%), Gaps = 34/246 (13%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
EGV + RE+ L HPNI+R+ +Y + E+ + G
Sbjct: 55 EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEF--------------APRGE 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K + F + I RD+KP N+L+ G+ +K+A FG
Sbjct: 101 LYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE-LKIADFG 159
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
S++A GT Y PE++ G + VD+W G + E + G P F +
Sbjct: 160 W--SVHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDLWCAGVLCYEFLVGMPPFDSPS 216
Query: 189 SLITLGRIVGKSRK-PSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
T RIV K P F L++G DLISK+L P +R+ +
Sbjct: 217 HTETHRRIVNVDLKFPPF--------LSDG-------SKDLISKLLRYHPPQRLPLKGVM 261
Query: 248 QQEYFK 253
+ + K
Sbjct: 262 EHPWVK 267
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 104 IRRDLKPVNILV--DLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ RDLKP N+L+ G VK+A FGLA + + GT Y +PE+L Y
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA-Y 183
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
VDIW G I ++ G P F + +I K D + + +
Sbjct: 184 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI----------KAGAYDFPSPEWDTV 233
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEY 251
P +LI++ML ++P KRITA EAL+ +
Sbjct: 234 TPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 83/196 (42%), Gaps = 56/196 (28%)
Query: 107 DLKPVNILV---------DLDGK---------TVKVAGFGLAKSLYAYKGESSAEVGTHY 148
DLKP NIL +L+ K V+V FG A + + S V T +
Sbjct: 162 DLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEH---HSTIVSTRH 218
Query: 149 YKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS---LITLGRIVG------- 198
Y+APE++L L +S D+W +GCI E G LF ++ L + RI+G
Sbjct: 219 YRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMI 277
Query: 199 -KSRKPSF---------------------CKLSLRDHLTNGFPGLEPAGIDLISKMLGMD 236
K+RK + CK LR +LT+ DLI ML +
Sbjct: 278 RKTRKQKYFYRGRLDWDENTSAGRYVRENCK-PLRRYLTSEAEEHHQL-FDLIESMLEYE 335
Query: 237 PDKRITAAEALQQEYF 252
P KR+T EALQ +F
Sbjct: 336 PAKRLTLGEALQHPFF 351
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 16/146 (10%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP NIL+D G V + FGL K + +S GT Y APE+L Y
Sbjct: 161 VYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ-PYDR 218
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEP 223
VD W +G + EM+ G P F N+ I+ K L L+ ++TN
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP-------LQLKPNITN------- 264
Query: 224 AGIDLISKMLGMDPDKRITAAEALQQ 249
+ L+ +L D KR+ A + +
Sbjct: 265 SARHLLEGLLQKDRTKRLGAKDDFME 290
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 37/245 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPKDSMNGYSTKNFN 74
E++ L H NI++ + S+ ++ +F QV L+ LL+ S G N
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFI-KIFMEQVPGGSLSALLR----SKWGPLKDNEQ 108
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ +T +L + + RD+K N+L++ +K++ FG +K L
Sbjct: 109 TIGFYTKQIL--------EGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 160
Query: 135 AYKGESSAEVGTHYYKAPELL-LGLLEYSTAVDIWPVGCIFGEMVSGKPLF-----PGAN 188
+ GT Y APE++ G Y A DIW +GC EM +GKP F P A
Sbjct: 161 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA- 219
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
++ +G P + + F EP DPDKR A + L
Sbjct: 220 AMFKVGMFKVHPEIPESMSAEAKAFILKCF---EP------------DPDKRACANDLLV 264
Query: 249 QEYFK 253
E+ K
Sbjct: 265 DEFLK 269
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 37/245 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPKDSMNGYSTKNFN 74
E++ L H NI++ + S+ ++ +F QV L+ LL+ S G N
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFI-KIFMEQVPGGSLSALLR----SKWGPLKDNEQ 122
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ +T +L + + RD+K N+L++ +K++ FG +K L
Sbjct: 123 TIGFYTKQIL--------EGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174
Query: 135 AYKGESSAEVGTHYYKAPELL-LGLLEYSTAVDIWPVGCIFGEMVSGKPLF-----PGAN 188
+ GT Y APE++ G Y A DIW +GC EM +GKP F P A
Sbjct: 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA- 233
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
++ +G P + + F EP DPDKR A + L
Sbjct: 234 AMFKVGMFKVHPEIPESMSAEAKAFILKCF---EP------------DPDKRACANDLLV 278
Query: 249 QEYFK 253
E+ K
Sbjct: 279 DEFLK 283
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
RE +L HPNI+RL + + Y VF DL G ++ +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVF-----DLV---------TGGELFEDIVAR 99
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL- 133
++ + R+LKP N+L+ G VK+A FGLA +
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 134 --YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A+ G + GT Y +PE+L YS VDIW G I ++ G P F +
Sbjct: 160 DSEAWHGFA----GTPGYLSPEVLKKD-PYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
Query: 192 TLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+I K D+ + + + P LI ML ++P KRITA +AL+
Sbjct: 215 LYAQI----------KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
RE +L HPNI+RL + + Y VF DL G ++ +
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVF-----DLV---------TGGELFEDIVAR 99
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL- 133
++ + R+LKP N+L+ G VK+A FGLA +
Sbjct: 100 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159
Query: 134 --YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A+ G + GT Y +PE+L YS VDIW G I ++ G P F +
Sbjct: 160 DSEAWHGFA----GTPGYLSPEVLKKD-PYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
Query: 192 TLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+I K D+ + + + P LI ML ++P KRITA +AL+
Sbjct: 215 LYAQI----------KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
RE +L HPNI+RL + + Y VF DL G ++ +
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVF-----DLV---------TGGELFEDIVAR 98
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL- 133
++ + R+LKP N+L+ G VK+A FGLA +
Sbjct: 99 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 158
Query: 134 --YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A+ G + GT Y +PE+L YS VDIW G I ++ G P F +
Sbjct: 159 DSEAWHGFA----GTPGYLSPEVLKKD-PYSKPVDIWACGVILYILLVGYPPFWDEDQHR 213
Query: 192 TLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+I K D+ + + + P LI ML ++P KRITA +AL+
Sbjct: 214 LYAQI----------KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 260
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRV--ASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
+++ +E+ L L H N+I+L+ V + +Y V EY V + +L DS+
Sbjct: 51 ANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML----DSVPEKRF 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
++ F + E+ + +D+KP N+L+ G T+K++ G+A
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGI---------VHKDIKPGNLLLTTGG-TLKISALGVA 156
Query: 131 KSLYAYKGESSAEV--GTHYYKAPELLLGLLEYST-AVDIWPVGCIFGEMVSGKPLFPGA 187
++L+ + + + G+ ++ PE+ GL +S VDIW G + +G F G
Sbjct: 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG-LEPAGIDLISKMLGMDPDKRITAAEA 246
N + L +GK + PG P DL+ ML +P KR + +
Sbjct: 217 N-IYKLFENIGKG--------------SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261
Query: 247 LQQEYFK 253
Q +F+
Sbjct: 262 RQHSWFR 268
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 103 YIRRDLKPVNILVDLD-GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGL-LE 160
Y+ DLKP NI+ +K+ FGL L K GT + APE+ G +
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG 220
Y T D+W VG + ++SG F G N TL R C ++ D + F G
Sbjct: 229 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL-------RNVKSCDWNMDD---SAFSG 276
Query: 221 LEPAGIDLISKMLGMDPDKRITAAEALQQEYFK--DVPGRS 259
+ G D I K+L DP+ R+T +AL+ + + PGR
Sbjct: 277 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD 317
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
RE +L HPNI+RL + + Y VF DL G ++ +
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVF-----DLV---------TGGELFEDIVAR 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV--DLDGKTVKVAGFGLAKSL- 133
++ + R+LKP N+L+ G VK+A FGLA +
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
Query: 134 --YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLI 191
A+ G + GT Y +PE+L YS VDIW G I ++ G P F +
Sbjct: 183 DSEAWHGFA----GTPGYLSPEVLKKD-PYSKPVDIWACGVILYILLVGYPPFWDEDQHR 237
Query: 192 TLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+I K D+ + + + P LI ML ++P KRITA +AL+
Sbjct: 238 LYAQI----------KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 103 YIRRDLKPVNILVDLD-GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGL-LE 160
Y+ DLKP NI+ +K+ FGL L K GT + APE+ G +
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG 220
Y T D+W VG + ++SG F G N TL R C ++ D + F G
Sbjct: 335 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL-------RNVKSCDWNMDD---SAFSG 382
Query: 221 LEPAGIDLISKMLGMDPDKRITAAEALQQEYFK--DVPGRS 259
+ G D I K+L DP+ R+T +AL+ + + PGR
Sbjct: 383 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD 423
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 122 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 168 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 221
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 222 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
Query: 250 EYFK 253
+ K
Sbjct: 272 PWIK 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 122 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 168 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 221
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 222 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
Query: 250 EYFK 253
+ K
Sbjct: 272 PWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS--MNGYSTKNFN 74
REV +L+H NI+ ++ V + Y V EY ++ P S + + + +
Sbjct: 60 REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY--------IEGPTLSEYIESHGPLSVD 111
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ FT +L R + RD+KP NIL+D KT+K+ FG+AK+L
Sbjct: 112 TAINFTNQIL--------DGIKHAHDMRIVHRDIKPQNILID-SNKTLKIFDFGIAKALS 162
Query: 135 AYK-GESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSL 190
+++ +GT Y +PE G DI+ +G + EM+ G+P F G ++
Sbjct: 163 ETSLTQTNHVLGTVQYFSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 93/245 (37%), Gaps = 39/245 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT----VKVAGFGLAKS 132
L + L + DLKP NI++ LD +K+ FGLA
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHK 167
Query: 133 LYAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 168 I-DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDT 221
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 222 KQETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 249 QEYFK 253
+ K
Sbjct: 272 HPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 180
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
S DIW +G EM G+ P ++ + +P L D++ N P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDA--------KEDSRPPMAIFELLDYIVNEPPPK 232
Query: 222 EPAGI------DLISKMLGMDPDKRITAAEALQQEYFK 253
P+G+ D ++K L +P +R + + + K
Sbjct: 233 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 30/173 (17%)
Query: 105 RRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS--------AEVGTHYYKAPEL 154
RDLKP NIL + + VK+ FGL + G+ S G+ Y APE+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGI-KLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 155 LLGLLE----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSF--CKL 208
+ E Y D+W +G I ++SG P F G G G R + C+
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG-----RCGSDCGWDRGEACPACQN 247
Query: 209 SLRDHLTNG---FPGLEPAGI-----DLISKMLGMDPDKRITAAEALQQEYFK 253
L + + G FP + A I DLISK+L D +R++AA+ LQ + +
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 93/245 (37%), Gaps = 39/245 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT----VKVAGFGLAKS 132
L + L + DLKP NI++ LD +K+ FGLA
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIML-LDRNVPKPRIKIIDFGLAHK 167
Query: 133 LYAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+ + E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 168 I-DFGNEFKNIFGTPAFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDT 221
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 222 KQETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 249 QEYFK 253
+ K
Sbjct: 272 HPWIK 276
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 32/233 (13%)
Query: 17 REVSCLMELNHPNIIRLMRVAS--QGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+E++ L +L+HPN+++L+ V +LY VFE VN +++ P ++ S
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFEL-VNQ-GPVMEVP--TLKPLSEDQAR 140
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
Y F + E+ + I RD+KP N+LV DG +K+A FG++
Sbjct: 141 FY--FQDLIKGIEYLHY---------QKIIHRDIKPSNLLVGEDGH-IKIADFGVSNEFK 188
Query: 135 AYKGESSAEVGTHYYKAPELLLGLLEY--STAVDIWPVGCIFGEMVSGKPLFPGANSLIT 192
S VGT + APE L + A+D+W +G V G+ F +
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL 248
Query: 193 LGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAE 245
+I ++ L D P + DLI++ML +P+ RI E
Sbjct: 249 HSKIKSQA-------LEFPDQ-----PDIAEDLKDLITRMLDKNPESRIVVPE 289
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 110/274 (40%), Gaps = 56/274 (20%)
Query: 13 SSMIREVSCLMELNHPNIIRL------------MRVASQGIYLYPVFEYQVNDLAYLLKY 60
++REV L +L HP I+R ++ +S +YLY + Q+ L
Sbjct: 48 EKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY--IQMQLCRKENL--- 102
Query: 61 PKDSMNGYSTKNFNSYSL-FTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
KD MNG T S+ FL + E + RDLKP NI +D
Sbjct: 103 -KDWMNGRCTIEERERSVCLHIFLQIAE------AVEFLHSKGLMHRDLKPSNIFFTMDD 155
Query: 120 KTVKVAGFGLAKSLYAYKGESSA------------EVGTHYYKAPELLLGLLEYSTAVDI 167
VKV FGL ++ + E + +VGT Y +PE + G YS VDI
Sbjct: 156 -VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG-NSYSHKVDI 213
Query: 168 WPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGID 227
+ +G I E+ L+P + + + R + R F L F P
Sbjct: 214 FSLGLILFEL-----LYPFSTQMERV-RTLTDVRNLKFPPL---------FTQKYPCEYV 258
Query: 228 LISKMLGMDPDKRITAAEALQQEYFKDV--PGRS 259
++ ML P +R A ++ F+D+ PG++
Sbjct: 259 MVQDMLSPSPMERPEAINIIENAVFEDLDFPGKT 292
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L E+ HPN+I L V + + E + K+S+ F
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKTVKVAGFGLAKSL 133
L + L + DLKP NI++ ++ +K+ FGLA +
Sbjct: 123 ILNGVYYL--------------HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 134 YAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANS 189
+ E GT + APE++ LGL D+W +G I ++SG F G
Sbjct: 169 -DFGNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASPFLGDTK 222
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
TL + S D F D I ++L DP KR+T ++LQ
Sbjct: 223 QETLANV-------SAVNYEFEDEY---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 250 EYFK 253
+ K
Sbjct: 273 PWIK 276
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGL-AKSLYAYKGESSAEVGTHYYKAPELLLGL 158
+ I RDLK NIL LDG +K+A FG+ AK+ + +GT Y+ APE+++
Sbjct: 126 DNKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 159 LE----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
Y D+W +G EM +P N + L +I KS P+ + S
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI-AKSEPPTLAQPS---RW 240
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
++ F D + K L + D R T ++ LQ +
Sbjct: 241 SSNFK-------DFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 101/262 (38%), Gaps = 38/262 (14%)
Query: 6 NTMEGVPSSMI-REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
++ GV I REV+ L E+ HPNII L + + + E + K+S
Sbjct: 45 SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES 104
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKT 121
+ F L L R DLKP NI++ ++
Sbjct: 105 LTEDEATQFLKQILDGVHYL--------------HSKRIAHFDLKPENIMLLDKNVPNPR 150
Query: 122 VKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEM 177
+K+ FG+A + A E GT + APE++ LGL D+W +G I +
Sbjct: 151 IKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYIL 204
Query: 178 VSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDP 237
+SG F G TL I + D F D I ++L DP
Sbjct: 205 LSGASPFLGETKQETLTNISAVNY----------DFDEEYFSNTSELAKDFIRRLLVKDP 254
Query: 238 DKRITAAEALQQEYFKDVPGRS 259
+R+T A++L+ + K + R+
Sbjct: 255 KRRMTIAQSLEHSWIKAIRRRN 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 99/255 (38%), Gaps = 33/255 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
E + ++ RE+ L HPNI+R V +L V EY + G
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY--------------ASGGE 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVD-LDGKTVKVAGF 127
+ + F+ F + RDLK N L+D +K+A F
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADF 161
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG- 186
G +K+ + SA VGT Y APE+LL D+W G M+ G F
Sbjct: 162 GYSKASVLHSQPKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
Query: 187 ---ANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
N T+ RI+ + ++ D++ + P LIS++ DP KRI+
Sbjct: 221 EEPKNFRKTIHRILN-------VQYAIPDYV-----HISPECRHLISRIFVADPAKRISI 268
Query: 244 AEALQQEYF-KDVPG 257
E E+F K++P
Sbjct: 269 PEIRNHEWFLKNLPA 283
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P S + E + +L H +++L V S+ +Y V EY + LL + KD G + K
Sbjct: 48 PESFLEEAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYM--NKGSLLDFLKDG-EGRALK 103
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
N LV+ YI RDL+ NILV +G K+A FGLA+
Sbjct: 104 LPN---------LVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-NGLICKIADFGLAR 153
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+V+ G+ +PG
Sbjct: 154 LI--EDNEXTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGM 210
Query: 188 NSLITLGRIVGKSRK--PSFCKLSLRDHLTNGF 218
N+ L ++ R P C +SL + + + +
Sbjct: 211 NNREVLEQVERGYRMPCPQDCPISLHELMIHCW 243
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP NIL+D G V+++ GLA K + A VGTH Y APE+L + Y +
Sbjct: 314 VYRDLKPANILLDEHGH-VRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDS 370
Query: 164 AVDIWPVGCIFGEMVSGKPLF 184
+ D + +GC+ +++ G F
Sbjct: 371 SADWFSLGCMLFKLLRGHSPF 391
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 30/173 (17%)
Query: 105 RRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKGESS--------AEVGTHYYKAPEL 154
RDLKP NIL + + VK+ F L + G+ S G+ Y APE+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGI-KLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 155 LLGLLE----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSF--CKL 208
+ E Y D+W +G I ++SG P F G G G R + C+
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG-----RCGSDCGWDRGEACPACQN 247
Query: 209 SLRDHLTNG---FPGLEPAGI-----DLISKMLGMDPDKRITAAEALQQEYFK 253
L + + G FP + A I DLISK+L D +R++AA+ LQ + +
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP NIL+D G V+++ GLA K + A VGTH Y APE+L + Y +
Sbjct: 313 VYRDLKPANILLDEHGH-VRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDS 369
Query: 164 AVDIWPVGCIFGEMVSGKPLF 184
+ D + +GC+ +++ G F
Sbjct: 370 SADWFSLGCMLFKLLRGHSPF 390
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 35/246 (14%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYS 69
G+ + EV +L HP+I+ L Y+Y V E N + +Y K+ + +S
Sbjct: 53 GMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN--GEMNRYLKNRVKPFS 110
Query: 70 TKNFNSY--SLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ + T L + + RDL N+L+ + +K+A F
Sbjct: 111 ENEARHFMHQIITGMLYLHSHGI-------------LHRDLTLSNLLLTRN-MNIKIADF 156
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
GLA L + GT Y +PE+ + D+W +GC+F ++ G+P F
Sbjct: 157 GLATQLKMPHEKHYTLCGTPNYISPEIATRS-AHGLESDVWSLGCMFYTLLIGRPPFDTD 215
Query: 188 NSLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEA 246
TL ++V PSF + + DLI ++L +P R++ +
Sbjct: 216 TVKNTLNKVVLADYEMPSFLSIEAK---------------DLIHQLLRRNPADRLSLSSV 260
Query: 247 LQQEYF 252
L +
Sbjct: 261 LDHPFM 266
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 144 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 199
Query: 162 STAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG 220
S DIW +G EM G+ P+ G+ S+ L D++ N P
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI---------------FELLDYIVNEPPP 244
Query: 221 LEPAGI------DLISKMLGMDPDKRITAAEALQQEYFK 253
P+G+ D ++K L +P +R + + + K
Sbjct: 245 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP NIL+D G V+++ GLA K + A VGTH Y APE+L + Y +
Sbjct: 314 VYRDLKPANILLDEHGH-VRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDS 370
Query: 164 AVDIWPVGCIFGEMVSGKPLF 184
+ D + +GC+ +++ G F
Sbjct: 371 SADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLKP NIL+D G V+++ GLA K + A VGTH Y APE+L + Y +
Sbjct: 314 VYRDLKPANILLDEHGH-VRISDLGLACDFS--KKKPHASVGTHGYMAPEVLQKGVAYDS 370
Query: 164 AVDIWPVGCIFGEMVSGKPLF 184
+ D + +GC+ +++ G F
Sbjct: 371 SADWFSLGCMLFKLLRGHSPF 391
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP NIL+D +G +K+ FG AK + + GT Y APE++ Y+
Sbjct: 128 IYRDLKPENILLDKNGH-IKITDFGFAKYV---PDVTYXLCGTPDYIAPEVV-STKPYNK 182
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKS-RKPSFCKLSLRDHLT 215
++D W G + EM++G F +N++ T +I+ R P F ++D L+
Sbjct: 183 SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE 160
+ I RDLK NIL LDG +K+A FG++ + +GT Y+ APE+++
Sbjct: 154 NKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 161 ----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
Y D+W +G EM +P N + L +I KS P+ + S ++
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI-AKSEPPTLAQPS---RWSS 268
Query: 217 GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
F D + K L + D R T ++ LQ +
Sbjct: 269 NFK-------DFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 58/197 (29%)
Query: 107 DLKPVNILV------------------DLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY 148
DLKP NIL + +++VA FG A + + + V T +
Sbjct: 157 DLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRH 213
Query: 149 YKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF---PGANSLITLGRIVG------- 198
Y+ PE++L L ++ D+W +GCI E G LF L+ + +I+G
Sbjct: 214 YRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 272
Query: 199 -KSRKPSF---------------------CKLSLRDHLTNGFPGLEPAGI-DLISKMLGM 235
++RK + CK L+ ++ LE + DL+ +ML
Sbjct: 273 HRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQD--SLEHVQLFDLMRRMLEF 329
Query: 236 DPDKRITAAEALQQEYF 252
DP +RIT AEAL +F
Sbjct: 330 DPAQRITLAEALLHPFF 346
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLA-KSLYAYKGESSAEVGTHYYKAPELLLGLL- 159
Y+ RD+KP NIL+D++G +++A FG K + +SS VGT Y +PE+L +
Sbjct: 195 HYVHRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 160 ---EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSF 205
Y D W +G EM+ G+ F + + T G+I+ + F
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 302
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
Query: 104 IRRDLKPVNILV--DLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ RDLKP N+L + D +K+ FG A+ T +Y APELL Y
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGY 186
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
+ D+W +G I M+SG+ F + +T V +K S + +
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE---GEAWKNV 243
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
DLI +L +DP+KR+ + E+ +D
Sbjct: 244 SQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 16/155 (10%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE 160
+ I RDLK NIL LDG +K+A FG++ + +GT Y+ APE+++
Sbjct: 154 NKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 161 ----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
Y D+W +G EM +P N + L +I KS P+ + S ++
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI-AKSEPPTLAQPS---RWSS 268
Query: 217 GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
F D + K L + D R T ++ LQ +
Sbjct: 269 NFK-------DFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 58/197 (29%)
Query: 107 DLKPVNILV------------------DLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY 148
DLKP NIL + +++VA FG A + + + V T +
Sbjct: 148 DLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRH 204
Query: 149 YKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF---PGANSLITLGRIVG------- 198
Y+ PE++L L ++ D+W +GCI E G LF L+ + +I+G
Sbjct: 205 YRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 263
Query: 199 -KSRKPSF---------------------CKLSLRDHLTNGFPGLEPAGI-DLISKMLGM 235
++RK + CK L+ ++ LE + DL+ +ML
Sbjct: 264 HRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQD--SLEHVQLFDLMRRMLEF 320
Query: 236 DPDKRITAAEALQQEYF 252
DP +RIT AEAL +F
Sbjct: 321 DPAQRITLAEALLHPFF 337
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 58/197 (29%)
Query: 107 DLKPVNILV------------------DLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY 148
DLKP NIL + +++VA FG A + + + V T +
Sbjct: 180 DLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRH 236
Query: 149 YKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF---PGANSLITLGRIVG------- 198
Y+ PE++L L ++ D+W +GCI E G LF L+ + +I+G
Sbjct: 237 YRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMI 295
Query: 199 -KSRKPSF---------------------CKLSLRDHLTNGFPGLEPAGI-DLISKMLGM 235
++RK + CK L+ ++ LE + DL+ +ML
Sbjct: 296 HRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQD--SLEHVQLFDLMRRMLEF 352
Query: 236 DPDKRITAAEALQQEYF 252
DP +RIT AEAL +F
Sbjct: 353 DPAQRITLAEALLHPFF 369
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 92/249 (36%), Gaps = 32/249 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
NT+ + E+ L L H +I +L V ++ V EY + +D +
Sbjct: 46 NTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRL 105
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVA 125
+ T+ F Y RDLKP N+L D + +K+
Sbjct: 106 SEEETRVV--------------FRQIVSAVAYVHSQGYAHRDLKPENLLFD-EYHKLKLI 150
Query: 126 GFGLAKSLYAYKG-ESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
FGL K G+ Y APEL+ G + D+W +G + ++ G F
Sbjct: 151 DFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
Query: 185 PGANSLITLGRIV-GKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
N + +I+ GK P + L P+ I L+ +ML +DP KRI+
Sbjct: 211 DDDNVMALYKKIMRGKYDVPKW---------------LSPSSILLLQQMLQVDPKKRISM 255
Query: 244 AEALQQEYF 252
L +
Sbjct: 256 KNLLNHPWI 264
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 121
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 122 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 170
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ VG+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 171 LDDEETSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE 160
+ I RDLK NIL LDG +K+A FG++ +GT Y+ APE+++
Sbjct: 154 NKIIHRDLKAGNILFTLDGD-IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 161 ----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
Y D+W +G EM +P N + L +I KS P+ + S ++
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI-AKSEPPTLAQPS---RWSS 268
Query: 217 GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEY 251
F D + K L + D R T ++ LQ +
Sbjct: 269 NFK-------DFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 98/255 (38%), Gaps = 33/255 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
E + +++ RE+ L HPNI+R V +L V EY + G
Sbjct: 56 EKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY--------------ASGGE 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVD-LDGKTVKVAGF 127
+ + F+ F + RDLK N L+D +K+ F
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDF 161
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG- 186
G +KS + S VGT Y APE+LL D+W G M+ G F
Sbjct: 162 GYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
Query: 187 ---ANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
N T+ RI+ + ++ D++ + P LIS++ DP KRI+
Sbjct: 221 EEPKNFRKTIHRILN-------VQYAIPDYV-----HISPECRHLISRIFVADPAKRISI 268
Query: 244 AEALQQEYF-KDVPG 257
E E+F K++P
Sbjct: 269 PEIRNHEWFLKNLPA 283
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAK----SLYAYKGES----------SAEVGTHYY 149
I RDLKP+NI +D + + VK+ FGLAK SL K +S ++ +GT Y
Sbjct: 138 IHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 150 KAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
A E+L G Y+ +D++ +G IF EM+
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 15/89 (16%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAK----SLYAYKGES----------SAEVGTHYY 149
I RDLKP+NI +D + + VK+ FGLAK SL K +S ++ +GT Y
Sbjct: 138 IHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 150 KAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
A E+L G Y+ +D++ +G IF EM+
Sbjct: 197 VATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG-ESSAEVGTHYYKAPELLL---- 156
Y+ RD+KP N+L+D++G +++A FG + +SS VGT Y +PE+L
Sbjct: 195 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSF 205
G+ +Y D W +G EM+ G+ F + + T G+I+ + F
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 302
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG-ESSAEVGTHYYKAPELLL---- 156
Y+ RD+KP N+L+D++G +++A FG + +SS VGT Y +PE+L
Sbjct: 211 HYVHRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSF 205
G+ +Y D W +G EM+ G+ F + + T G+I+ + F
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 318
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 97/255 (38%), Gaps = 33/255 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
E + ++ RE+ L HPNI+R V +L V EY + G
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY--------------ASGGE 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVD-LDGKTVKVAGF 127
+ + F+ F + RDLK N L+D +K+ F
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAF 161
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG- 186
G +KS + S VGT Y APE+LL D+W G M+ G F
Sbjct: 162 GYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
Query: 187 ---ANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
N T+ RI+ + ++ D++ + P LIS++ DP KRI+
Sbjct: 221 EEPKNFRKTIHRILN-------VQYAIPDYV-----HISPECRHLISRIFVADPAKRISI 268
Query: 244 AEALQQEYF-KDVPG 257
E E+F K++P
Sbjct: 269 PEIRNHEWFLKNLPA 283
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 74/172 (43%), Gaps = 28/172 (16%)
Query: 105 RRDLKPVNILVDLDGKT--VKVAGFGLAKSLYAYKG-------ESSAEVGTHYYKAPELL 155
RDLKP NIL + K VK+ F L + E + G+ Y APE++
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 156 LGLLE----YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKP--SFCKLS 209
+ Y D+W +G + M+SG P F G G G R C+
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG-----HCGADCGWDRGEVCRVCQNK 248
Query: 210 LRDHLTNG---FPGLEPAGI-----DLISKMLGMDPDKRITAAEALQQEYFK 253
L + + G FP + A I DLISK+L D +R++AA+ LQ + +
Sbjct: 249 LFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 100/262 (38%), Gaps = 38/262 (14%)
Query: 6 NTMEGVPSSMI-REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
++ GV I REV+ L E+ HPNII L + + + E + K+S
Sbjct: 66 SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES 125
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKT 121
+ F L L R DLKP NI++ ++
Sbjct: 126 LTEDEATQFLKQILDGVHYL--------------HSKRIAHFDLKPENIMLLDKNVPNPR 171
Query: 122 VKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEM 177
+K+ FG+A + A E GT + APE++ LGL D+W +G I +
Sbjct: 172 IKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYIL 225
Query: 178 VSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDP 237
+SG F G TL I + D F D I ++L DP
Sbjct: 226 LSGASPFLGETKQETLTNISAVN----------YDFDEEYFSNTSELAKDFIRRLLVKDP 275
Query: 238 DKRITAAEALQQEYFKDVPGRS 259
+R+ A++L+ + K + R+
Sbjct: 276 KRRMXIAQSLEHSWIKAIRRRN 297
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP NIL+D +G +K+ FGL+K ++ ++ + GT Y APE ++ +S
Sbjct: 152 IYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-VVNRQGHSH 209
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
+ D W G + EM++G F G + T+ I+
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL 243
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 105
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 106 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 154
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ VG+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 155 LDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+E +M+L+HP +++ V S+ +Y V EY N LL Y + G
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC--LLNYLRSHGKGLEPSQ--- 105
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E ++I RDL N LVD D VKV+ FG+ + Y
Sbjct: 106 --------LLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD-LCVKVSDFGMTR--YV 154
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ + VGT + + APE+ +YS+ D+W G + E+ S
Sbjct: 155 LDDQYVSSVGTKFPVKWSAPEVF-HYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 67 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 121
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 122 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 170
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ VG+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 171 LDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 106
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 107 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 155
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ VG+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 156 LDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 112
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 113 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 161
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ VG+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 162 LDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 101
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 102 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 150
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ VG+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 151 LDDEYTSSVGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 102/248 (41%), Gaps = 36/248 (14%)
Query: 11 VPSSMIR-EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYS 69
V ++R E+ L+ L+HPNII+L + + V E + + GY
Sbjct: 90 VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF----DRIVEKGYY 145
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG--KTVKVAGF 127
++ + ++ V + RDLKP N+L +K+A F
Sbjct: 146 SERDAADAVKQILEAVAYLHENGI----------VHRDLKPENLLYATPAPDAPLKIADF 195
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG-KPLFPG 186
GL+K + ++ GT Y APE+L G Y VD+W VG I ++ G +P +
Sbjct: 196 GLSK-IVEHQVLMKTVCGTPGYCAPEILRGC-AYGPEVDMWSVGIITYILLCGFEPFYDE 253
Query: 187 ANSLITLGRIVGKSR---KPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
RI+ P + ++SL DL+ K++ +DP KR+T
Sbjct: 254 RGDQFMFRRILNCEYYFISPWWDEVSLN-------------AKDLVRKLIVLDPKKRLTT 300
Query: 244 AEALQQEY 251
+ALQ +
Sbjct: 301 FQALQHPW 308
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 106 RDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTA- 164
RD+KP NIL+D +G+ VK++ FG +S Y + GT+ + PE Y+ A
Sbjct: 176 RDVKPSNILMDKNGR-VKLSDFG--ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAK 232
Query: 165 VDIWPVG-CIFGEMVSGKPLFPGANSL-ITLGRIVGKSRKPSFCKLSLRDHL-------- 214
VDIW +G C++ + P SL I+L + R + R+H
Sbjct: 233 VDIWSLGICLYVMFYNVVPF-----SLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287
Query: 215 ---TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+N F L ID + L +P +RIT+ +AL+ E+ D
Sbjct: 288 STCSNNF--LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP NIL+D +G +K+ FGL+K ++ ++ + GT Y APE ++ ++
Sbjct: 148 IYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQ 205
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
+ D W G + EM++G F G + T+ I+
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 97/255 (38%), Gaps = 33/255 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
E + ++ RE+ L HPNI+R V +L V EY + G
Sbjct: 55 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY--------------ASGGE 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVD-LDGKTVKVAGF 127
+ + F+ F + RDLK N L+D +K+ F
Sbjct: 101 LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDF 160
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG- 186
G +KS + S VGT Y APE+LL D+W G M+ G F
Sbjct: 161 GYSKSSVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 219
Query: 187 ---ANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
N T+ RI+ + ++ D++ + P LIS++ DP KRI+
Sbjct: 220 EEPKNFRKTIHRILN-------VQYAIPDYV-----HISPECRHLISRIFVADPAKRISI 267
Query: 244 AEALQQEYF-KDVPG 257
E E+F K++P
Sbjct: 268 PEIRNHEWFLKNLPA 282
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 19/143 (13%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLE-Y 161
I RD+K NIL+D +G V + FGL+K A + E + + GT Y AP+++ G +
Sbjct: 181 IYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH 239
Query: 162 STAVDIWPVGCIFGEMVSGKPLFP---GANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
AVD W +G + E+++G F NS + R + KS P ++S
Sbjct: 240 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS--------- 290
Query: 219 PGLEPAGIDLISKMLGMDPDKRI 241
DLI ++L DP KR+
Sbjct: 291 ----ALAKDLIQRLLMKDPKKRL 309
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 30/165 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES-SAEVGTHYYKAPELLLGLLE 160
R + RDLKP NIL+D D ++++ GLA ++ +G++ VGT Y APE++
Sbjct: 306 RIVYRDLKPENILLD-DHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNE-R 361
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG 220
Y+ + D W +GC+ EM++G+ F I + + L P
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---------------ERLVKEVPE 406
Query: 221 -----LEPAGIDLISKMLGMDPDKRI-----TAAEALQQEYFKDV 255
P L S++L DP +R+ +A E + FK +
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP NIL+D +G +K+ FGL+K ++ ++ + GT Y APE ++ ++
Sbjct: 148 IYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQ 205
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
+ D W G + EM++G F G + T+ I+
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 30/165 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES-SAEVGTHYYKAPELLLGLLE 160
R + RDLKP NIL+D D ++++ GLA ++ +G++ VGT Y APE++
Sbjct: 306 RIVYRDLKPENILLD-DHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNE-R 361
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG 220
Y+ + D W +GC+ EM++G+ F I + + L P
Sbjct: 362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV---------------ERLVKEVPE 406
Query: 221 -----LEPAGIDLISKMLGMDPDKRI-----TAAEALQQEYFKDV 255
P L S++L DP +R+ +A E + FK +
Sbjct: 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLKP NIL+D +G +K+ FGL+K ++ ++ + GT Y APE ++ ++
Sbjct: 149 IYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-VVNRRGHTQ 206
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
+ D W G + EM++G F G + T+ I+
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 240
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 97/255 (38%), Gaps = 33/255 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
E + ++ RE+ L HPNI+R V +L V EY + G
Sbjct: 56 EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEY--------------ASGGE 101
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVD-LDGKTVKVAGF 127
+ + F+ F + RDLK N L+D +K+ F
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAF 161
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG- 186
G +KS + + VGT Y APE+LL D+W G M+ G F
Sbjct: 162 GYSKSSVLH-SQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDP 220
Query: 187 ---ANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
N T+ RI+ + ++ D++ + P LIS++ DP KRI+
Sbjct: 221 EEPKNFRKTIHRILN-------VQYAIPDYV-----HISPECRHLISRIFVADPAKRISI 268
Query: 244 AEALQQEYF-KDVPG 257
E E+F K++P
Sbjct: 269 PEIRNHEWFLKNLPA 283
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 95/252 (37%), Gaps = 46/252 (18%)
Query: 17 REVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
REV L E + HPN+IR + Y E A L +Y K+F
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA---ATLQEY-------VEQKDFAH 115
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK----VAGFGLAK 131
L LL + + RDLKP NIL+ + K ++ FGL K
Sbjct: 116 LGLEPITLLQQ----TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
Query: 132 SLYAYK---GESSAEVGTHYYKAPELLLGLLEY--STAVDIWPVGCIFGEMVS------G 180
L + S GT + APE+L + + VDI+ GC+F ++S G
Sbjct: 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231
Query: 181 KPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKR 240
K L AN I LG P + +LI KM+ MDP KR
Sbjct: 232 KSLQRQAN--ILLGACSLDCLHPE--------------KHEDVIARELIEKMIAMDPQKR 275
Query: 241 ITAAEALQQEYF 252
+A L+ +F
Sbjct: 276 PSAKHVLKHPFF 287
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 104/270 (38%), Gaps = 67/270 (24%)
Query: 18 EVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS-MNGYSTKNFNS 75
E+ L E + HPN+IR + +LY E +L L++ S N K +N
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK------------TVK 123
SL + I RDLKP NILV + +
Sbjct: 136 ISLLRQI---------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 186
Query: 124 VAGFGLAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYST------AVDIWPVGCI 173
++ FGL K L + ++ + GT ++APELL E ST ++DI+ +GC+
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL----EESTKRRLTRSIDIFSMGCV 242
Query: 174 FGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE----------- 222
F ++S K + P K S ++ G L+
Sbjct: 243 FYYILS-------------------KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLI 283
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
DLIS+M+ DP KR TA + L+ F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 104/270 (38%), Gaps = 67/270 (24%)
Query: 18 EVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS-MNGYSTKNFNS 75
E+ L E + HPN+IR + +LY E +L L++ S N K +N
Sbjct: 76 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 135
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK------------TVK 123
SL + I RDLKP NILV + +
Sbjct: 136 ISLLRQI---------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 186
Query: 124 VAGFGLAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYST------AVDIWPVGCI 173
++ FGL K L + ++ + GT ++APELL E ST ++DI+ +GC+
Sbjct: 187 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELL----EESTKRRLTRSIDIFSMGCV 242
Query: 174 FGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE----------- 222
F ++S K + P K S ++ G L+
Sbjct: 243 FYYILS-------------------KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLI 283
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
DLIS+M+ DP KR TA + L+ F
Sbjct: 284 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RD+K N+L+ G VK+A FG+A L + + + VGT ++ APE ++ Y
Sbjct: 140 KKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIQQSAY 197
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
+ DIW +G E+ G+P + + L ++ K+ P +L T F
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHPMRVL-FLIPKNNPP-----TLVGDFTKSFK-- 249
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEY 251
+ I L DP R TA E L+ ++
Sbjct: 250 -----EFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 46 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 105
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 106 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 150
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 151 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 207
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 208 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 258
Query: 248 QQEYF 252
+ ++
Sbjct: 259 KDRWY 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF-NS 75
RE LNHP I+ +Y E L Y++ + ++G + ++ ++
Sbjct: 61 REAQNAAALNHPAIV--------AVYDTGEAETPAGPLPYIVM---EYVDGVTLRDIVHT 109
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
T +E I RD+KP NIL+ VKV FG+A+++ A
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA-TNAVKVVDFGIARAI-A 167
Query: 136 YKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG 186
G S +A +GT Y +PE G D++ +GC+ E+++G+P F G
Sbjct: 168 DSGNSVXQTAAVIGTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 97/256 (37%), Gaps = 38/256 (14%)
Query: 6 NTMEGVPSSMI-REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
++ GV I REV+ L E+ HPNII L + + + E + K+S
Sbjct: 52 SSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES 111
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV---DLDGKT 121
+ F L L R DLKP NI++ ++
Sbjct: 112 LTEDEATQFLKQILDGVHYL--------------HSKRIAHFDLKPENIMLLDKNVPNPR 157
Query: 122 VKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEM 177
+K+ FG+A + A E GT + APE++ LGL D+W +G I +
Sbjct: 158 IKLIDFGIAHKIEA-GNEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYIL 211
Query: 178 VSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDP 237
+SG F G TL I + D F D I ++L DP
Sbjct: 212 LSGASPFLGETKQETLTNISAVN----------YDFDEEYFSNTSELAKDFIRRLLVKDP 261
Query: 238 DKRITAAEALQQEYFK 253
+R+ A++L+ + K
Sbjct: 262 KRRMXIAQSLEHSWIK 277
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+L+D +G K+A FG+ K ++ GT Y APE+L +L Y
Sbjct: 146 IYRDLKLDNVLLDHEGH-CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML-YGP 203
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANS 189
AVD W +G + EM+ G F N
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P ++ +E+ LNH N+++ +G Y EY + P M +
Sbjct: 48 PENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 RF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA- 151
Query: 132 SLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQ 209
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+ K ++ N + ++ A + L+ K+L +P RIT + +
Sbjct: 210 PSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 249 QEYF 252
++
Sbjct: 261 DRWY 264
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 30/159 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLE 160
+ + RD+KP NILV+ G+ +K+ FG++ L E + E VGT Y +PE L G
Sbjct: 128 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLI---DEMANEFVGTRSYMSPERLQG-TH 182
Query: 161 YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPG 220
YS DIW +G EM VG+ +P L D++ N P
Sbjct: 183 YSVQSDIWSMGLSLVEMA------------------VGRYPRPPMAIFELLDYIVNEPPP 224
Query: 221 LEPAGI------DLISKMLGMDPDKRITAAEALQQEYFK 253
P+ + D ++K L +P +R + + + K
Sbjct: 225 KLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P ++ +E+ LNH N+++ +G Y EY + P M +
Sbjct: 49 PENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 108
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 109 RF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA- 152
Query: 132 SLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQ 210
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+ K ++ N + ++ A + L+ K+L +P RIT + +
Sbjct: 211 PSDSCQEYSDWKEKKTYL---------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261
Query: 249 QEYF 252
++
Sbjct: 262 DRWY 265
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 48 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 107
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 152
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 153 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 209
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 210 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 260
Query: 248 QQEYF 252
+ ++
Sbjct: 261 KDRWY 265
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P ++ +E+ LNH N+++ +G Y EY + P M +
Sbjct: 48 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 RF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA- 151
Query: 132 SLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQ 209
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+ K ++ N + ++ A + L+ K+L +P RIT + +
Sbjct: 210 PSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 249 QEYF 252
++
Sbjct: 261 DRWY 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 30/245 (12%)
Query: 11 VPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYST 70
P ++ +E+ LNH N+++ +G Y EY + P M
Sbjct: 47 CPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDA 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 107 QRF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA 151
Query: 131 KSLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 -TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWD 208
Query: 188 NSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEAL 247
+ K ++ N + ++ A + L+ K+L +P RIT +
Sbjct: 209 QPSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIK 259
Query: 248 QQEYF 252
+ ++
Sbjct: 260 KDRWY 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYS 162
I RDLK N+++D +G +K+A FG+ K + G ++ E GT Y APE++ Y
Sbjct: 142 IYRDLKLDNVMLDSEGH-IKIADFGMCKE-HMMDGVTTREFCGTPDYIAPEII-AYQPYG 198
Query: 163 TAVDIWPVGCIFGEMVSGKPLFPGANS 189
+VD W G + EM++G+P F G +
Sbjct: 199 KSVDWWAYGVLLYEMLAGQPPFDGEDE 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P ++ +E+ LNH N+++ +G Y EY + P M +
Sbjct: 48 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 RF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA- 151
Query: 132 SLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQ 209
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+ K ++ N + ++ A + L+ K+L +P RIT + +
Sbjct: 210 PSDSCQEYSDWKEKKTY---------LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 249 QEYF 252
++
Sbjct: 261 DRWY 264
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 103/272 (37%), Gaps = 67/272 (24%)
Query: 18 EVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS-MNGYSTKNFNS 75
E+ L E + HPN+IR + +LY E +L L++ S N K +N
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK------------TVK 123
SL + I RDLKP NILV + +
Sbjct: 118 ISLLRQI---------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168
Query: 124 VAGFGLAKSLYAYKGESSAEV------GTHYYKAPELLLGLLEYST------AVDIWPVG 171
++ FGL K L + G+SS GT ++APELL T ++DI+ +G
Sbjct: 169 ISDFGLCKKLDS--GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 172 CIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE--------- 222
C+F ++S K + P K S ++ G L+
Sbjct: 227 CVFYYILS-------------------KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRS 267
Query: 223 --PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
DLIS+M+ DP KR TA + L+ F
Sbjct: 268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P ++ +E+ LNH N+++ +G Y EY + P M +
Sbjct: 48 PENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 RF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA- 151
Query: 132 SLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQ 209
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+ K ++ N + ++ A + L+ K+L +P RIT + +
Sbjct: 210 PSDSCQEYSDWKEKKTYL---------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 249 QEYF 252
++
Sbjct: 261 DRWY 264
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF-NS 75
RE LNHP I+ +Y E L Y++ + ++G + ++ ++
Sbjct: 61 REAQNAAALNHPAIV--------AVYATGEAETPAGPLPYIVM---EYVDGVTLRDIVHT 109
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
T +E I RD+KP NI++ VKV FG+A+++ A
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAI-A 167
Query: 136 YKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG 186
G S +A +GT Y +PE G D++ +GC+ E+++G+P F G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYL-----YPVFEYQVNDLAYLLKYPKDSMNG 67
+I+EV L +L HPN I+ +G YL + V EY + + LL+ K +
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQY-----RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE 153
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+L L I RD+K NIL+ G VK+ F
Sbjct: 154 VEIAAVTHGALQGLAYL--------------HSHNMIHRDVKAGNILLSEPG-LVKLGDF 198
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE--YSTAVDIWPVGCIFGEMVSGKPLFP 185
G A + ++ VGT Y+ APE++L + E Y VD+W +G E+ KP
Sbjct: 199 GSASIM----APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 254
Query: 186 GANSLITLGRIV 197
N++ L I
Sbjct: 255 NMNAMSALYHIA 266
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 95/244 (38%), Gaps = 30/244 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P ++ +E+ LNH N+++ +G Y EY + P M +
Sbjct: 48 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
F F G RD+KP N+L+D + +K++ FGLA
Sbjct: 108 RF--------------FHQLMAGVVYLHGIGITHRDIKPENLLLD-ERDNLKISDFGLA- 151
Query: 132 SLYAYKGES---SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+++ Y + GT Y APELL ++ VD+W G + M++G+ P
Sbjct: 152 TVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQ 209
Query: 189 SLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQ 248
+ K ++ N + ++ A + L+ K+L +P RIT + +
Sbjct: 210 PSDSXQEYSDWKEKKTYL---------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 249 QEYF 252
++
Sbjct: 261 DRWY 264
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 31/192 (16%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYL-----YPVFEYQVNDLAYLLKYPKDSMNG 67
+I+EV L +L HPN I+ +G YL + V EY + + LL+ K +
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQY-----RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQE 114
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+L L I RD+K NIL+ G VK+ F
Sbjct: 115 VEIAAVTHGALQGLAYL--------------HSHNMIHRDVKAGNILLSEPG-LVKLGDF 159
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE--YSTAVDIWPVGCIFGEMVSGKPLFP 185
G A + ++ VGT Y+ APE++L + E Y VD+W +G E+ KP
Sbjct: 160 GSASIM----APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215
Query: 186 GANSLITLGRIV 197
N++ L I
Sbjct: 216 NMNAMSALYHIA 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF-NS 75
RE LNHP I+ +Y E L Y++ + ++G + ++ ++
Sbjct: 61 REAQNAAALNHPAIV--------AVYDTGEAETPAGPLPYIVM---EYVDGVTLRDIVHT 109
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
T +E I RD+KP NI++ VKV FG+A+++ A
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAI-A 167
Query: 136 YKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG 186
G S +A +GT Y +PE G D++ +GC+ E+++G+P F G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 81/194 (41%), Gaps = 26/194 (13%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY- 76
E+ + +LNHPN++ V L P NDL L +M + Y
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAP------NDLPLL------AMEYCEGGDLRKYL 109
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRY------IRRDLKPVNILVDLDGKTV--KVAGFG 128
+ F ++E RY I RDLKP NI++ + + K+ G
Sbjct: 110 NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169
Query: 129 LAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG-KPLFPG 186
AK L +GE E VGT Y APE LL +Y+ VD W G + E ++G +P P
Sbjct: 170 YAKEL--DQGELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
Query: 187 ANSLITLGRIVGKS 200
+ G++ KS
Sbjct: 227 WQPVQWHGKVREKS 240
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 102/270 (37%), Gaps = 63/270 (23%)
Query: 18 EVSCLMELN-HPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS-MNGYSTKNFNS 75
E+ L E + HPN+IR + +LY E +L L++ S N K +N
Sbjct: 58 EIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP 117
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGK------------TVK 123
SL + I RDLKP NILV + +
Sbjct: 118 ISLLRQI---------ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168
Query: 124 VAGFGLAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYST------AVDIWPVGCI 173
++ FGL K L + ++ + GT ++APELL T ++DI+ +GC+
Sbjct: 169 ISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 174 FGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE----------- 222
F ++S K + P K S ++ G L+
Sbjct: 229 FYYILS-------------------KGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLI 269
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYF 252
DLIS+M+ DP KR TA + L+ F
Sbjct: 270 AEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
I E +M L+H +++L V ++ ++ + EY N LL Y ++ + + T+
Sbjct: 52 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN--GCLLNYLREMRHRFQTQQ--- 106
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
L+E +++ RDL N LV+ D VKV+ FGL++ Y
Sbjct: 107 --------LLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-DQGVVKVSDFGLSR--YV 155
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
E ++ G+ + + PE+L+ ++S+ DIW G + E+ S
Sbjct: 156 LDDEYTSSRGSKFPVRWSPPEVLM-YSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 81/194 (41%), Gaps = 26/194 (13%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY- 76
E+ + +LNHPN++ V L P NDL L +M + Y
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAP------NDLPLL------AMEYCEGGDLRKYL 110
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRY------IRRDLKPVNILVDLDGKTV--KVAGFG 128
+ F ++E RY I RDLKP NI++ + + K+ G
Sbjct: 111 NQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 170
Query: 129 LAKSLYAYKGESSAE-VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSG-KPLFPG 186
AK L +GE E VGT Y APE LL +Y+ VD W G + E ++G +P P
Sbjct: 171 YAKEL--DQGELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
Query: 187 ANSLITLGRIVGKS 200
+ G++ KS
Sbjct: 228 WQPVQWHGKVREKS 241
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF-NS 75
RE LNHP I+ +Y E L Y++ + ++G + ++ ++
Sbjct: 61 REAQNAAALNHPAIV--------AVYDTGEAETPAGPLPYIVM---EYVDGVTLRDIVHT 109
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
T +E I RD+KP NI++ VKV FG+A+++ A
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA-TNAVKVMDFGIARAI-A 167
Query: 136 YKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG 186
G S +A +GT Y +PE G D++ +GC+ E+++G+P F G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 13/154 (8%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL---LGL 158
+ I RD+KP NIL+D G +K+ FG++ L ++ + G Y APE +
Sbjct: 146 KIIHRDIKPSNILLDRSG-NIKLCDFGISGQLVDSIAKTR-DAGCRPYMAPERIDPSASR 203
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGF 218
Y D+W +G E+ +G+ +P NS+ V K P R+
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEERE------ 257
Query: 219 PGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
P+ I+ ++ L D KR E L+ +
Sbjct: 258 --FSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF-NS 75
RE LNHP I+ +Y E L Y++ + ++G + ++ ++
Sbjct: 61 REAQNAAALNHPAIV--------AVYDTGEAETPAGPLPYIVM---EYVDGVTLRDIVHT 109
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
T +E I RD+KP NI++ VKV FG+A+++ A
Sbjct: 110 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAI-A 167
Query: 136 YKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG 186
G S +A +GT Y +PE G D++ +GC+ E+++G+P F G
Sbjct: 168 DSGNSVTQTAAVIGTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKS--LYAYKGESSAEVGTHYYKAPELLLGL 158
+I RD+K NIL+D + T K++ FGLA++ +A S VGT Y APE L G
Sbjct: 143 NHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG- 200
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKP 182
E + DI+ G + E+++G P
Sbjct: 201 -EITPKSDIYSFGVVLLEIITGLP 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 69/221 (31%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE------SSAE-------------- 143
+ RD+KP N L + K + FGLA+ + K E S A+
Sbjct: 139 VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLS 198
Query: 144 --------VGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLG 194
GT ++APE+L +TA+D+W G IF ++SG+ P + ++ L L
Sbjct: 199 RRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALA 258
Query: 195 RIV---------------GKS------------RK---------PSFCKLS--LRDHLTN 216
+I+ GKS RK S KL+ ++ H TN
Sbjct: 259 QIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATN 318
Query: 217 --GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
G+ + DL+ K+L ++P RITA EAL +FKD+
Sbjct: 319 LEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK N+++D DG +K+ FGL K GT Y APE+L +Y
Sbjct: 274 VYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN-DYGR 331
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLE 222
AVD W +G + EM+ G+ F + +L L + + FP L
Sbjct: 332 AVDWWGLGVVMYEMMCGRLPFYNQDH-------------EKLFELILMEEIR--FPRTLG 376
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L+S +L DP +R+ A E +Q +F
Sbjct: 377 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK N+++D DG +K+ FGL K GT Y APE+L +Y
Sbjct: 271 VYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN-DYGR 328
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLE 222
AVD W +G + EM+ G+ F + +L L + + FP L
Sbjct: 329 AVDWWGLGVVMYEMMCGRLPFYNQDH-------------EKLFELILMEEIR--FPRTLG 373
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L+S +L DP +R+ A E +Q +F
Sbjct: 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGL-AKSLYAYKGESSAEVGTHYYKAPELLLGL-- 158
R I RDLK N+L+ L+G +++A FG+ AK+L + S +GT Y+ APE+++
Sbjct: 137 RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETM 194
Query: 159 --LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
Y DIW +G EM +P N + L +I KS P+ LT
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKSDPPTL--------LTP 245
Query: 217 GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+E D + L +P+ R +AA+ L+ + +
Sbjct: 246 SKWSVE--FRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 19/175 (10%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF-NS 75
RE LNHP I+ +Y E L Y++ + ++G + ++ ++
Sbjct: 78 REAQNAAALNHPAIV--------AVYDTGEAETPAGPLPYIVM---EYVDGVTLRDIVHT 126
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
T +E I RD+KP NI++ VKV FG+A+++ A
Sbjct: 127 EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT-NAVKVMDFGIARAI-A 184
Query: 136 YKGES----SAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPG 186
G S +A +GT Y +PE G D++ +GC+ E+++G+P F G
Sbjct: 185 DSGNSVTQTAAVIGTAQYLSPEQARGD-SVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 107 DLKPVNILVDLD-GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL----LGLLEY 161
D+KP NI+ + +VK+ FGLA L + T + APE++ +G
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNPDEI-VKVTTATAEFAAPEIVDREPVGFY-- 230
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
D+W +G + ++SG F G + L TL + C + + F +
Sbjct: 231 ---TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-------KRCDWEFDE---DAFSSV 277
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
P D I +L +P KR+T +AL+ + K
Sbjct: 278 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 180
Query: 162 STAVDIWPVGCIFGEMVSGK-PL-FPGANSL-ITLGRIV--------------------- 197
S DIW +G EM G+ P+ P A L + G V
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGI------DLISKMLGMDPDKRITAAEALQQEY 251
G +P L D++ N P P+G+ D ++K L +P +R + + +
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300
Query: 252 FK 253
K
Sbjct: 301 IK 302
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK N+++D DG +K+ FGL K GT Y APE+L +Y
Sbjct: 131 VYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN-DYGR 188
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLE 222
AVD W +G + EM+ G+ F + +L L + + FP L
Sbjct: 189 AVDWWGLGVVMYEMMCGRLPFYNQDH-------------EKLFELILMEEIR--FPRTLG 233
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L+S +L DP +R+ A E +Q +F
Sbjct: 234 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 180
Query: 162 STAVDIWPVGCIFGEMVSGK-PL-FPGANSL-ITLGRIV--------------------- 197
S DIW +G EM G+ P+ P A L + G V
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGI------DLISKMLGMDPDKRITAAEALQQEY 251
G +P L D++ N P P+G+ D ++K L +P +R + + +
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300
Query: 252 FK 253
K
Sbjct: 301 IK 302
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK N+++D DG +K+ FGL K GT Y APE+L +Y
Sbjct: 133 VYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN-DYGR 190
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLE 222
AVD W +G + EM+ G+ F + +L L + + FP L
Sbjct: 191 AVDWWGLGVVMYEMMCGRLPFYNQDH-------------EKLFELILMEEIR--FPRTLG 235
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L+S +L DP +R+ A E +Q +F
Sbjct: 236 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 68/155 (43%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RDLK N+++D DG +K+ FGL K GT Y APE+L +Y
Sbjct: 132 VYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN-DYGR 189
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLE 222
AVD W +G + EM+ G+ F + +L L + + FP L
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDH-------------EKLFELILMEEIR--FPRTLG 234
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L+S +L DP +R+ A E +Q +F
Sbjct: 235 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGL-AKSLYAYKGESSAEVGTHYYKAPELLLGL-- 158
R I RDLK N+L+ L+G +++A FG+ AK+L + S +GT Y+ APE+++
Sbjct: 129 RIIHRDLKAGNVLMTLEGD-IRLADFGVSAKNLKTLQKRDSF-IGTPYWMAPEVVMCETM 186
Query: 159 --LEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTN 216
Y DIW +G EM +P N + L +I KS P+ LT
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-AKSDPPTL--------LTP 237
Query: 217 GFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
+E D + L +P+ R +AA+ L+ + +
Sbjct: 238 SKWSVE--FRDFLKIALDKNPETRPSAAQLLEHPFVSSI 274
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 180
Query: 162 STAVDIWPVGCIFGEMVSGK-PL-FPGANSL-ITLGRIV--------------------- 197
S DIW +G EM G+ P+ P A L + G V
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGI------DLISKMLGMDPDKRITAAEALQQEY 251
G +P L D++ N P P+G+ D ++K L +P +R + + +
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300
Query: 252 FK 253
K
Sbjct: 301 IK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 180
Query: 162 STAVDIWPVGCIFGEMVSGK-PL-FPGANSL-ITLGRIV--------------------- 197
S DIW +G EM G+ P+ P A L + G V
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY 240
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGI------DLISKMLGMDPDKRITAAEALQQEY 251
G +P L D++ N P P+G+ D ++K L +P +R + + +
Sbjct: 241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 300
Query: 252 FK 253
K
Sbjct: 301 IK 302
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKS--LYAYKGESSAEVGTHYYKAPELLLGL 158
+I RD+K NIL+D + T K++ FGLA++ +A S VGT Y APE L G
Sbjct: 152 NHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG- 209
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKP 182
E + DI+ G + E+++G P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE------VGTHYYKAPELLLG 157
I RD+K NIL+ DG +V++A FG++ + A G+ + VGT + APE++
Sbjct: 143 IHRDVKAGNILLGEDG-SVQIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 200
Query: 158 LLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNG 217
+ Y DIW G E+ +G + + P L L L N
Sbjct: 201 VRGYDFKADIWSFGITAIELATGAAPY---------------HKYPPMKVLMLT--LQND 243
Query: 218 FPGLEPAGID-------------LISKMLGMDPDKRITAAEALQQEYFKDVPGR 258
P LE D +IS L DP+KR TAAE L+ ++F+ +
Sbjct: 244 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNK 297
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+L+D +G +K+ +G+ K +S GT Y APE+L G +Y
Sbjct: 175 IYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE-DYGF 232
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS 204
+VD W +G + EM++G+ F IVG S P
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFD----------IVGSSDNPD 263
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 152 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 207
Query: 162 STAVDIWPVGCIFGEMVSGK-PL-FPGANSL-ITLGRIV--------------------- 197
S DIW +G EM G+ P+ P A L + G V
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267
Query: 198 GKSRKPSFCKLSLRDHLTNGFPGLEPAGI------DLISKMLGMDPDKRITAAEALQQEY 251
G +P L D++ N P P+G+ D ++K L +P +R + + +
Sbjct: 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327
Query: 252 FK 253
K
Sbjct: 328 IK 329
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 38/169 (22%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE------VGTHYYKAPELLLG 157
I RD+K NIL+ DG +V++A FG++ + A G+ + VGT + APE++
Sbjct: 138 IHRDVKAGNILLGEDG-SVQIADFGVS-AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQ 195
Query: 158 LLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNG 217
+ Y DIW G E+ +G + + P L L L N
Sbjct: 196 VRGYDFKADIWSFGITAIELATGAAPY---------------HKYPPMKVLMLT--LQND 238
Query: 218 FPGLEPAGID-------------LISKMLGMDPDKRITAAEALQQEYFK 253
P LE D +IS L DP+KR TAAE L+ ++F+
Sbjct: 239 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 111 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 156
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 157 RLI--EDAEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+L+D +G +K+ +G+ K +S GT Y APE+L G +Y
Sbjct: 143 IYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYGF 200
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS 204
+VD W +G + EM++G+ F IVG S P
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFD----------IVGSSDNPD 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+L+D +G +K+ +G+ K +S GT Y APE+L G +Y
Sbjct: 128 IYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYGF 185
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS 204
+VD W +G + EM++G+ F IVG S P
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFD----------IVGSSDNPD 216
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 127 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN-DYGR 184
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
AVD W +G + EM+ G+ P + + + ++ + R P L
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------------TLS 229
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 53 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 111
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 112 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 157
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 158 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 214
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 111 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 156
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 157 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 130 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN-DYGR 187
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
AVD W +G + EM+ G+ P + + + ++ + R P L
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------------TLS 232
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 233 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 54 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 112
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 113 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 158
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 159 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+L+D +G +K+ +G+ K +S GT Y APE+L G +Y
Sbjct: 132 IYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE-DYGF 189
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPS 204
+VD W +G + EM++G+ F IVG S P
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFD----------IVGSSDNPD 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 127 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN-DYGR 184
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP-GLE 222
AVD W +G + EM+ G+ F + +L L + + FP L
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDH-------------ERLFELILMEEIR--FPRTLS 229
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 111 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 156
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 157 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 61 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 119
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 120 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 165
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 166 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 118
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 119 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 164
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 165 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 116
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 117 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 162
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 163 RLI--EDNEXTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RD+K N+L+ G+ VK+A FG+A L + + + VGT ++ APE ++ Y
Sbjct: 144 KKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAY 201
Query: 162 STAVDIWPVGCIFGEMVSGKP 182
+ DIW +G E+ G+P
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 127 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN-DYGR 184
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
AVD W +G + EM+ G+ P + + + ++ + R P L
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------------TLS 229
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 127 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN-DYGR 184
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
AVD W +G + EM+ G+ P + + + ++ + R P L
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------------TLS 229
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSK--GSLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEXTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 127 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN-DYGR 184
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
AVD W +G + EM+ G+ P + + + ++ + R P L
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------------TLS 229
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 104 IRRDLKPVNI--LVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ RDLKP N+ L + + + FGL+K G S GT Y APE +L Y
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSK--MEQNGIMSTACGTPGYVAPE-VLAQKPY 184
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
S AVD W +G I ++ G P F +I K + + + +
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI----------KEGYYEFESPFWDDI 234
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEY 251
+ D I +L DP++R T +AL +
Sbjct: 235 SESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 23/155 (14%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
+ RD+K N+++D DG +K+ FGL K + GT Y APE+L +Y
Sbjct: 132 VYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN-DYGR 189
Query: 164 AVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
AVD W +G + EM+ G+ P + + + ++ + R P L
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---------------TLS 234
Query: 223 PAGIDLISKMLGMDPDKRI-----TAAEALQQEYF 252
P L++ +L DP +R+ A E ++ +F
Sbjct: 235 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 15/150 (10%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
R I RD+K N+L+ G VK+A FG+A L + + + VGT ++ APE ++ Y
Sbjct: 136 RKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAY 193
Query: 162 STAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGL 221
DIW +G E+ G+P + + L I P +L + F
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI------PKNSPPTLEGQHSKPFK-- 245
Query: 222 EPAGIDLISKMLGMDPDKRITAAEALQQEY 251
+ + L DP R TA E L+ ++
Sbjct: 246 -----EFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RD+K N+L+ G+ VK+A FG+A L + + + VGT ++ APE ++ Y
Sbjct: 124 KKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAY 181
Query: 162 STAVDIWPVGCIFGEMVSGKP 182
+ DIW +G E+ G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 65/167 (38%), Gaps = 18/167 (10%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPNIIRL V ++G V EY N D
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ---------- 147
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL N+LVD KV+ FGL++ L
Sbjct: 148 ---FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLED 203
Query: 136 YKGESSAEVGTH---YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + APE + +S+A D+W G + E+++
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 47 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 105
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 106 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 151
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 152 RLI--EDNEYTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 57 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 115
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 116 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 161
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 162 RLI--EDNEYTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RD+K N+L+ G+ VK+A FG+A L + + + VGT ++ APE ++ Y
Sbjct: 139 KKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAY 196
Query: 162 STAVDIWPVGCIFGEMVSGKP 182
+ DIW +G E+ G+P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 58 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 116
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 117 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 162
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 163 RLI--EDNEYTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 26/254 (10%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 196
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 197 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 253
Query: 185 PG--ANSLITLGRIVGKSRKPSFCK----LSLRDHLTNGFPGLEPAGIDLISKMLGMDPD 238
PG L L + + KPS C + +RD + P P L+ +
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL------ 306
Query: 239 KRITAAEALQQEYF 252
RI A + QEY
Sbjct: 307 DRIVALTS-NQEYL 319
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y +PE L G Y
Sbjct: 187 KIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THY 242
Query: 162 STAVDIWPVGCIFGEMVSGK-PLFP 185
S DIW +G EM G+ P+ P
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RD+K N+L+ G+ VK+A FG+A L + + + VGT ++ APE ++ Y
Sbjct: 124 KKIHRDIKAANVLLSEHGE-VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAY 181
Query: 162 STAVDIWPVGCIFGEMVSGKP 182
+ DIW +G E+ G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 52 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 110
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 111 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 156
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 157 RLI--EDNEYTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 120
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI RDL+ NILV D + K+A FGLA
Sbjct: 121 LLDMAAQIAEGMAFIEE-------------RNYIHRDLRAANILVS-DTLSCKIADFGLA 166
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 167 RLI--EDNEYTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSK--GSLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSK--GCLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSY 137
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 196
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 197 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 253
Query: 185 PG--ANSLITLGRIVGKSRKPSFC 206
PG L L + + KPS C
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNC 277
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKS--LYAYKGESSAEVGTHYYKAPELLLGL 158
+I RD+K NIL+D + T K++ FGLA++ +A VGT Y APE L G
Sbjct: 152 NHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG- 209
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKP 182
E + DI+ G + E+++G P
Sbjct: 210 -EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 19/234 (8%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 181
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 182 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 238
Query: 185 PG--ANSLITLGRIVGKSRKPSFCK----LSLRDHLTNGFPGLEPAGIDLISKM 232
PG L L + + KPS C + +RD + P P L+ +
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 291
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 19/234 (8%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 185
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 186 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 242
Query: 185 PG--ANSLITLGRIVGKSRKPSFCK----LSLRDHLTNGFPGLEPAGIDLISKM 232
PG L L + + KPS C + +RD + P P L+ +
Sbjct: 243 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 295
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 101 TRYIRRDLKPVNILVDLDGKTVKVAGFGLAKS--LYAYKGESSAEVGTHYYKAPELLLGL 158
+I RD+K NIL+D + T K++ FGLA++ +A VGT Y APE L G
Sbjct: 146 NHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG- 203
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKP 182
E + DI+ G + E+++G P
Sbjct: 204 -EITPKSDIYSFGVVLLEIITGLP 226
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 19/234 (8%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 189
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 190 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 246
Query: 185 PG--ANSLITLGRIVGKSRKPSFCK----LSLRDHLTNGFPGLEPAGIDLISKM 232
PG L L + + KPS C + +RD + P P L+ +
Sbjct: 247 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL 299
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 196
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 197 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 253
Query: 185 PG--ANSLITLGRIVGKSRKPSFC 206
PG L L + + KPS C
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNC 277
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ + RD+KP NILV+ G+ +K+ FG++ L S VGT Y APE L G Y
Sbjct: 135 QIMHRDVKPSNILVNSRGE-IKLCDFGVSGQLIDSMANSF--VGTRSYMAPERLQG-THY 190
Query: 162 STAVDIWPVGCIFGEMVSGK-PLFP 185
S DIW +G E+ G+ P+ P
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 65/167 (38%), Gaps = 18/167 (10%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPNIIRL V ++G V EY N D
Sbjct: 98 LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ---------- 147
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL N+LVD KV+ FGL++ L
Sbjct: 148 ---FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD-SNLVCKVSDFGLSRVLED 203
Query: 136 YKGESSAEVGTH---YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + APE + +S+A D+W G + E+++
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPE-AIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSK--GSLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 104 IRRDLKPVNILV---DLDGKTVKVAGFGLAKSLYAYKGES-SAEVGTHYYKAPELLLGLL 159
+ RDLKP N+L D + K + ++ FGL+K KG+ S GT Y APE+L
Sbjct: 142 VHRDLKPENLLYYSQDEESK-IMISDFGLSK--MEGKGDVMSTACGTPGYVAPEVL-AQK 197
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
YS AVD W +G I ++ G P F N +I+ K + + + +
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQIL----KAEY------EFDSPYWD 247
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
+ + D I ++ DP+KR T +A + +
Sbjct: 248 DISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 188
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 189 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 245
Query: 185 PG--ANSLITLGRIVGKSRKPSFC 206
PG L L + + KPS C
Sbjct: 246 PGVPVEELFKLLKEGHRMDKPSNC 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 102/251 (40%), Gaps = 25/251 (9%)
Query: 13 SSMIREVSCL-MELNHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + M H NII L+ +Q LY + EY + N YL +
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 178
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 237
Query: 130 AKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
A+ ++ YK ++ + + APE L + Y+ D+W G + E+ + G P +
Sbjct: 238 ARDIHHIDYYKKTTNGRLPVKWM-APEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-Y 294
Query: 185 PG--ANSLITLGRIVGKSRKPSFCK----LSLRDHLTNGFPGLEPAGIDLISKMLGMDPD 238
PG L L + + KPS C + +RD + P P L+ +
Sbjct: 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD-CWHAVPSQRPTFKQLVEDL------ 347
Query: 239 KRITAAEALQQ 249
RI A + Q+
Sbjct: 348 DRIVALTSNQE 358
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GCLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 48 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGEMGKY--- 101
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 102 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 153
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 154 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 210
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 211 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 255
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 256 LQAFLEDYF 264
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 21/210 (10%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY-QVNDLAYLLKYPKDSMNGY---- 68
++ E + L ++NHP++I+L SQ L + EY + L L+ + GY
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 69 -----STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
S+ + T L+ + + RDL NILV +G+ +K
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMK 190
Query: 124 VAGFGLAKSLY---AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
++ FGL++ +Y +Y S + + L + Y+T D+W G + E+V+
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI--YTTQSDVWSFGVLLWEIVTL 248
Query: 180 -GKPLFPG--ANSLITLGRIVGKSRKPSFC 206
G P +PG L L + + +P C
Sbjct: 249 GGNP-YPGIPPERLFNLLKTGHRMERPDNC 277
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 15/89 (16%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAK----SLYAYKGES----------SAEVGTHYY 149
I R+LKP NI +D + + VK+ FGLAK SL K +S ++ +GT Y
Sbjct: 138 IHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXY 196
Query: 150 KAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
A E+L G Y+ +D + +G IF E +
Sbjct: 197 VATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 14/171 (8%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
+ I E+ L +NHPNI++L + L V EY Y + + + + Y+ +
Sbjct: 48 AFIVELRQLSRVNHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHA 105
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
S+ L + I RDLKP N+L+ G +K+ FG A +
Sbjct: 106 MSWCL--------QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 157
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
+ + G+ + APE+ G YS D++ G I E+++ + F
Sbjct: 158 QTHMTNNK---GSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 14/171 (8%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNF 73
+ I E+ L +NHPNI++L + L V EY Y + + + + Y+ +
Sbjct: 47 AFIVELRQLSRVNHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHA 104
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
S+ L + I RDLKP N+L+ G +K+ FG A +
Sbjct: 105 MSWCL--------QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
+ + G+ + APE+ G YS D++ G I E+++ + F
Sbjct: 157 QTHMTNNK---GSAAWMAPEVFEG-SNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV-NDLAYLLKYPKDSMNGYSTKNFNS 75
RE + + E ++PNI++L+ V + G + +FEY DL L+ SM+ ++ + +
Sbjct: 99 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLR----SMSPHTVCSLSH 154
Query: 76 YSLFTT----------FLLVEEFXXXXXXXXXXF---GTRYIRRDLKPVNILVDLDGKTV 122
L T E+ +++ RDL N LV + V
Sbjct: 155 SDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG-ENMVV 213
Query: 123 KVAGFGLAKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+A FGL++++Y+ YK + + + + + Y+T D+W G + E+ S
Sbjct: 214 KIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEIFS 271
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+++D +G +K+A FG+ K + GT Y APE++ Y
Sbjct: 143 IYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGK 200
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANS 189
+VD W G + EM++G+ F G +
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFEGEDE 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 46 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGEMGKY--- 99
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 100 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 151
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 152 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 208
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 209 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 253
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 254 LQAFLEDYF 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RDLKP NI + +D K VK+ FGL SL G+ + GT Y +PE + +Y
Sbjct: 156 KLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSL-KNDGKRTRSKGTLRYMSPE-QISSQDY 212
Query: 162 STAVDIWPVGCIFGEMV 178
VD++ +G I E++
Sbjct: 213 GKEVDLYALGLILAELL 229
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK N+++D +G +K+A FG+ K + GT Y APE++ Y
Sbjct: 464 IYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGK 521
Query: 164 AVDIWPVGCIFGEMVSGKPLFPGANS 189
+VD W G + EM++G+ F G +
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 90/254 (35%), Gaps = 33/254 (12%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYS 69
+ ++ RE+ L HPNI+R V +L + EY Y +
Sbjct: 58 AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDE 117
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVD-LDGKTVKVAGFG 128
+ F F + RDLK N L+D +K+ FG
Sbjct: 118 ARFF--------------FQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163
Query: 129 LAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+KS + S VGT Y APE+LL D+W G M+ G F
Sbjct: 164 YSKSSVLHSQPKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222
Query: 189 S----LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA 244
T+ RI+ K S+ D + + P LIS++ DP RI+
Sbjct: 223 EPRDYRKTIQRILS-------VKYSIPDDIR-----ISPECCHLISRIFVADPATRISIP 270
Query: 245 EALQQEYF-KDVPG 257
E +F K++P
Sbjct: 271 EIKTHSWFLKNLPA 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYST 70
P + + E + + +L H ++RL V +Q +Y + EY N L LK P +
Sbjct: 48 PDAFLAEANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINK 106
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA 130
+ + +EE YI R+L+ NILV D + K+A FGLA
Sbjct: 107 LLDMAAQIAEGMAFIEE-------------RNYIHRNLRAANILVS-DTLSCKIADFGLA 152
Query: 131 KSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
+ + E +A G + + APE + ++ D+W G + E+V+ G+ +PG
Sbjct: 153 RLI--EDNEYTAREGAKFPIKWTAPE-AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + ++ H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 99/249 (39%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 57 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGEMGKY--- 110
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL NILV + KVA FGLA+
Sbjct: 111 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVG-ENLVCKVADFGLAR 162
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 163 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 220 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 264
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 265 LQAFLEDYF 273
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 152 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 208
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 153 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 209
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 153 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 209
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 262
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 172 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 228
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 281
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 12/203 (5%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYS 69
S +I E+ + + H NII L+ +Q LY + EY + N YL +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 70 TKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ N ++ LV + I RDL N+LV D +K+A FGL
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN-VMKIADFGL 196
Query: 130 AKSLYAYKGESSAEVGTHYYK--APELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLFP 185
A+ ++ G K APE L + Y+ D+W G + E+ + G P +P
Sbjct: 197 ARDIHHIDXXKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSP-YP 254
Query: 186 G--ANSLITLGRIVGKSRKPSFC 206
G L L + + KPS C
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNC 277
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY-----AYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ +Y + ++ A++ + L
Sbjct: 152 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES--L 208
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 261
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 148 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 204
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 257
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 150 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 206
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 259
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 40/249 (16%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K M Y
Sbjct: 224 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGEMGKY--- 277
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGL +
Sbjct: 278 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLGR 329
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 330 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 386
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAA- 244
+ L ++ R P C SL DL+ + DP++R T
Sbjct: 387 VNREVLDQVERGYRMPCPPECPESLH---------------DLMCQCWRKDPEERPTFEY 431
Query: 245 -EALQQEYF 252
+A ++YF
Sbjct: 432 LQAFLEDYF 440
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 28/201 (13%)
Query: 2 MGIHNTMEGVPSSMIREVSCLMELNHPNIIRLMRV----ASQGI----YLYPVFEYQVND 53
M + N+ + + E +C+ + +HPN+IRL+ V +SQGI + P +Y D
Sbjct: 70 MKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKY--GD 127
Query: 54 LAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVN 112
L L Y + + + T L +F R ++ RDL N
Sbjct: 128 LHTYLLYSR-------LETGPKHIPLQTLL---KFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 113 ILVDLDGKTVKVAGFGLAKSLYA---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWP 169
++ D TV VA FGL+K +Y+ Y+ A++ + L + Y++ D+W
Sbjct: 178 CMLR-DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRV--YTSKSDVWA 234
Query: 170 VGCIFGEMVS-GKPLFPGANS 189
G E+ + G +PG +
Sbjct: 235 FGVTMWEIATRGMTPYPGVQN 255
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 53 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR 110
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 111 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 155
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 156 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 212 TYGMSPYPGID 222
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNII L V ++ + V EY N S++ + KN
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMEN----------GSLDTFLKKNDGQ-- 120
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L +
Sbjct: 121 -FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVL---E 175
Query: 138 GESSAEVGTH------YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ A T + APE + ++++A D+W G + E+VS
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPE-AIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 171 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 227
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 280
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 151 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 207
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 260
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+++ RDL N ++D + TVKVA FGLA+ + Y+ ++ A++ + L
Sbjct: 145 KFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES--L 201
Query: 157 GLLEYSTAVDIWPVGCIFGE-MVSGKPLFPGANSL-ITLGRIVGKS-RKPSFC 206
+++T D+W G + E M G P +P N+ IT+ + G+ +P +C
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYC 254
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 49 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR 106
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 107 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 151
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
KVA FGL++ + +A G + + APE L ++S D+W G + E+ +
Sbjct: 152 KVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 180 -GKPLFPGAN 188
G +PG +
Sbjct: 209 YGMSPYPGID 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEY 161
+ I RDLKP NI + +D K VK+ FGL SL G+ GT Y +PE + +Y
Sbjct: 142 KLINRDLKPSNIFL-VDTKQVKIGDFGLVTSL-KNDGKRXRSKGTLRYMSPE-QISSQDY 198
Query: 162 STAVDIWPVGCIFGEMV 178
VD++ +G I E++
Sbjct: 199 GKEVDLYALGLILAELL 215
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 43/193 (22%)
Query: 104 IRRDLKPVNILVDLDGK-----TVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGL 158
I D+KP N+L+++ +K+A G A Y + + T Y++PE+LLG
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLF-PGANSLIT-----LGRIV-------------GK 199
+ DIW C+ E+++G LF P T + +I+ GK
Sbjct: 211 -PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
Query: 200 SRKPSF---------CKLS---LRDHLTN--GFPGLEPAGI-DLISKMLGMDPDKRITAA 244
+ F KL L D LT F E I D +S ML +DP KR A
Sbjct: 270 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
Query: 245 EALQQEYFKDVPG 257
+ + KD G
Sbjct: 330 GLVNHPWLKDTLG 342
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 43/193 (22%)
Query: 104 IRRDLKPVNILVDLDGK-----TVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGL 158
I D+KP N+L+++ +K+A G A Y + + T Y++PE+LLG
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQTREYRSPEVLLGA 210
Query: 159 LEYSTAVDIWPVGCIFGEMVSGKPLF-PGANSLIT-----LGRIV-------------GK 199
+ DIW C+ E+++G LF P T + +I+ GK
Sbjct: 211 -PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
Query: 200 SRKPSF---------CKLS---LRDHLTN--GFPGLEPAGI-DLISKMLGMDPDKRITAA 244
+ F KL L D LT F E I D +S ML +DP KR A
Sbjct: 270 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
Query: 245 EALQQEYFKDVPG 257
+ + KD G
Sbjct: 330 GLVNHPWLKDTLG 342
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGL- 158
R I RD+KP NIL+D G V + F +A ++ + + + GT Y APE+
Sbjct: 133 NQRIIHRDMKPDNILLDEHGH-VHITDFNIA-AMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 159 -LEYSTAVDIWPVGCIFGEMVSGK 181
YS AVD W +G E++ G+
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DL-AYLLKYPKDSM---NGYSTK 71
RE L L H +I++ V G L VFEY + DL +L + D+M +G +
Sbjct: 66 REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
L + + ++ RDL N LV + VK+ FG+++
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGAN-LLVKIGDFGMSR 181
Query: 132 SLYAYKGESSAEVGTH-----YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLF 184
+Y+ VG H + PE ++ +++T D+W G I E+ + +P F
Sbjct: 182 DVYS---TDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWF 237
Query: 185 PGANS----LITLGRIVGKSRKPSFCKLSLRD 212
+N+ IT GR++ +P C + D
Sbjct: 238 QLSNTEVIECITQGRVL---ERPRVCPKEVYD 266
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 28/102 (27%)
Query: 107 DLKPVNILVD--------------LDGKTV----------KVAGFGLAKSLYAYKGESSA 142
DLKP NIL+D DGK + K+ FG A Y G +
Sbjct: 162 DLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG---S 218
Query: 143 EVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
+ T Y+APE++L L + + D+W GC+ E+ +G LF
Sbjct: 219 IINTRQYRAPEVILNL-GWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 36/176 (20%)
Query: 111 VNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPV 170
VN L + + +KV L + + +K + ++ T Y++ E+L+G Y+T DIW
Sbjct: 206 VNPLEPKNAEKLKVKIADLGNACWVHK-HFTEDIQTRQYRSLEVLIGS-GYNTPADIWST 263
Query: 171 GCIFGEMVSGKPLF-PGANSLIT------------LGR------IVGKSRKPSFCKLSLR 211
C+ E+ +G LF P + T LG+ + GK K F K
Sbjct: 264 ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 323
Query: 212 DHLTNGFP-GL-------------EPAGI-DLISKMLGMDPDKRITAAEALQQEYF 252
H+T P GL E AG D + ML + P+KR TAAE L+ +
Sbjct: 324 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 379
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 36/176 (20%)
Query: 111 VNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPV 170
VN L + + +KV L + + +K + ++ T Y++ E+L+G Y+T DIW
Sbjct: 222 VNPLEPKNAEKLKVKIADLGNACWVHK-HFTEDIQTRQYRSLEVLIGS-GYNTPADIWST 279
Query: 171 GCIFGEMVSGKPLF-PGANSLIT------------LGR------IVGKSRKPSFCKLSLR 211
C+ E+ +G LF P + T LG+ + GK K F K
Sbjct: 280 ACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339
Query: 212 DHLTNGFP-GL-------------EPAGI-DLISKMLGMDPDKRITAAEALQQEYF 252
H+T P GL E AG D + ML + P+KR TAAE L+ +
Sbjct: 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 53 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 111 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 155
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 156 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 212 TYGMSPYPGID 222
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 53 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 111 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 155
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 156 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 212 TYGMSPYPGID 222
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 52 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 109
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 110 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 154
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 155 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 210
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 211 TYGMSPYPGID 221
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 48 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 105
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 106 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 150
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 151 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 207 TYGMSPYPGID 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 61 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 118
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 119 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 163
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 164 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 219
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 220 TYGMSPYPGID 230
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 53 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 111 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 155
Query: 123 KVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
KVA FGL++ + +A G + + APE L ++S D+W G + E+ +
Sbjct: 156 KVADFGLSRLMTG--DTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIAT 212
Query: 180 -GKPLFPGAN 188
G +PG +
Sbjct: 213 YGMSPYPGID 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 25/212 (11%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY-QVNDLAYLLKYPKDSMNGY---- 68
++ E + L ++NHP++I+L SQ L + EY + L L+ + GY
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 69 -----STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
S+ + T L+ + + RDL NILV +G+ +K
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMK 190
Query: 124 VAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE-----YSTAVDIWPVGCIFGEMV 178
++ FGL++ +Y E + V + P + + Y+T D+W G + E+V
Sbjct: 191 ISDFGLSRDVY----EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 179 S--GKPLFPG--ANSLITLGRIVGKSRKPSFC 206
+ G P +PG L L + + +P C
Sbjct: 247 TLGGNP-YPGIPPERLFNLLKTGHRMERPDNC 277
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 50 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 107
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 108 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 152
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 153 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 209 TYGMSPYPGID 219
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 28/190 (14%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPKD 63
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 51 DTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
+N +L+ +I RDL N LV + VK
Sbjct: 109 EVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLVK 153
Query: 124 VAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
VA FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 154 VADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIAT 209
Query: 180 -GKPLFPGAN 188
G +PG +
Sbjct: 210 YGMSPYPGID 219
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 48 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 105
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 106 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 150
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 151 KVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 207 TYGMSPYPGID 217
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGLA+ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLARVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPK-DSMNGYSTKNFN 74
EV C + +HPNII L+ YLY EY N L +L K ++ ++ N
Sbjct: 77 EVLCKLG-HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 135
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
+ +L + LL F + +I RDL NILV + K+A FGL++
Sbjct: 136 ASTLSSQQLL--HFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSRGQ 192
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
Y ++ + + L + Y+T D+W G + E+VS
Sbjct: 193 EVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 10/167 (5%)
Query: 18 EVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPK-DSMNGYSTKNF 73
E+ L +L +HPNII L+ YLY EY N L +L K ++ ++ N
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 124
Query: 74 NSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGLAKS 132
+ +L + LL F + +I RDL NILV + K+A FGL++
Sbjct: 125 TASTLSSQQLL--HFAADVARGMDYLSQKQFIHRDLAARNILVG-ENYVAKIADFGLSRG 181
Query: 133 LYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
Y ++ + + L + Y+T D+W G + E+VS
Sbjct: 182 QEVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVS 226
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 95/252 (37%), Gaps = 49/252 (19%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSY 76
REVS L ++ HPNII L V + + E + K+S++ +F
Sbjct: 64 REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 77 SLFTTFLLVEEFXXXXXXXXXXFGTRYIRR-DLKPVNILVDLDGKT----VKVAGFGLAK 131
L L T+ I DLKP NI++ LD +K+ FGLA
Sbjct: 124 ILDGVNYL---------------HTKKIAHFDLKPENIML-LDKNIPIPHIKLIDFGLAH 167
Query: 132 SLYAYKGESSAEV----GTHYYKAPELL----LGLLEYSTAVDIWPVGCIFGEMVSGKPL 183
+ E E GT + APE++ LGL D+W +G I ++SG
Sbjct: 168 EI-----EDGVEFKNIFGTPEFVAPEIVNYEPLGL-----EADMWSIGVITYILLSGASP 217
Query: 184 FPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITA 243
F G TL I S D F D I K+L + KR+T
Sbjct: 218 FLGDTKQETLANITAVSY----------DFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Query: 244 AEALQQEYFKDV 255
EAL+ + V
Sbjct: 268 QEALRHPWITPV 279
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 49 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 106
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 107 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 151
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 152 KVADFGLSRLM---TGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 208 TYGMSPYPGID 218
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 48 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMT--YGNLLDYLREC 103
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 104 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 152
Query: 125 AGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
A FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 153 ADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 180 GKPLFPGAN 188
G +PG +
Sbjct: 209 GMSPYPGID 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 46 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMT--YGNLLDYLREC 101
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 102 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 150
Query: 125 AGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-G 180
A FGL++ + +A G + + APE L ++S D+W G + E+ + G
Sbjct: 151 ADFGLSRLMTG--DTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 181 KPLFPGAN 188
+PG +
Sbjct: 208 MSPYPGID 215
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 28/190 (14%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPKD 63
+TME ++E + + E+ HPN+++L+ V + Y V EY N L YL + ++
Sbjct: 68 DTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE 125
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
+ T +L+ +I RDL N LV + VK
Sbjct: 126 EV--------------TAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHVVK 170
Query: 124 VAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
VA FGL++ + G++ +A G + + APE L +S D+W G + E+ +
Sbjct: 171 VADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNTFSIKSDVWAFGVLLWEIAT 226
Query: 180 -GKPLFPGAN 188
G +PG +
Sbjct: 227 YGMSPYPGID 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 28/191 (14%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPK 62
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 50 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 107
Query: 63 DSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTV 122
+N +L+ +I RDL N LV + V
Sbjct: 108 QEVNA--------------VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-ENHLV 152
Query: 123 KVAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
KVA FGL++ + G++ +A G + + APE L ++S D+W G + E+
Sbjct: 153 KVADFGLSRLM---TGDTYTAPAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 179 S-GKPLFPGAN 188
+ G +PG +
Sbjct: 209 TYGMSPYPGID 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 39/164 (23%)
Query: 105 RRDLKPVNILVDLDGK--TVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYS 162
RD+KP N+L K +K+ FG AK + T YY APE+L G +Y
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQTPCYTPYYVAPEVL-GPEKYD 188
Query: 163 TAVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDH 213
+ D+W +G I ++ G P F PG I LG+
Sbjct: 189 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY----------------- 231
Query: 214 LTNGFPGLEPAGI-----DLISKMLGMDPDKRITAAEALQQEYF 252
GFP E + + LI +L DP +R+T + + +
Sbjct: 232 ---GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 48 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMT--YGNLLDYLREC 103
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 104 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 152
Query: 125 AGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
A FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 153 ADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 180 GKPLFPGAN 188
G +PG +
Sbjct: 209 GMSPYPGID 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 30 IIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFX 89
IIRL Y+Y V E DL LK K S++ + K++ L + +
Sbjct: 74 IIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGI 132
Query: 90 XXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--SSAEVGTH 147
+ DLKP N L+ +DG +K+ FG+A + ++VGT
Sbjct: 133 --------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTV 176
Query: 148 YYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRI 196
Y PE + + + S D+W +GCI M GK P N + L I
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 236
Query: 197 VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ + + F + +D L+ D++ L DP +RI+ E L Y +
Sbjct: 237 IDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY + LL + K Y
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYM--NKGSLLDFLKGETGKY--- 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 108 -------LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 159
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 160 LI--EDNEWTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGF 218
+ L ++ R P C SL D + +
Sbjct: 217 VNREVLDQVERGYRMPCPPECPESLHDLMCQCW 249
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 129
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 130 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 177
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ +Y + +S + L L+ ++T D+W G + E M G P
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 238 YPDVNTFDITVYLLQGRRLLQPEYC 262
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 39/164 (23%)
Query: 105 RRDLKPVNILVDLDGK--TVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYS 162
RD+KP N+L K +K+ FG AK + T YY APE+L G +Y
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQTPCYTPYYVAPEVL-GPEKYD 207
Query: 163 TAVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDH 213
+ D+W +G I ++ G P F PG I LG+
Sbjct: 208 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY----------------- 250
Query: 214 LTNGFPGLEPAGI-----DLISKMLGMDPDKRITAAEALQQEYF 252
GFP E + + LI +L DP +R+T + + +
Sbjct: 251 ---GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 46 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--YGNLLDYLREC 101
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 102 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 150
Query: 125 AGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-G 180
A FGL++ + +A G + + APE L ++S D+W G + E+ + G
Sbjct: 151 ADFGLSRLMTG--DTXTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 181 KPLFPGAN 188
+PG +
Sbjct: 208 MSPYPGID 215
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 130
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 131 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 178
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ +Y + +S + L L+ ++T D+W G + E M G P
Sbjct: 179 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 239 YPDVNTFDITVYLLQGRRLLQPEYC 263
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 71 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 127
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 128 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 175
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ +Y + +S + L L+ ++T D+W G + E M G P
Sbjct: 176 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 236 YPDVNTFDITVYLLQGRRLLQPEYC 260
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 30 IIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFX 89
IIRL Y+Y V E DL LK K S++ + K++ L + +
Sbjct: 70 IIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGI 128
Query: 90 XXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--SSAEVGTH 147
+ DLKP N L+ +DG +K+ FG+A + ++VGT
Sbjct: 129 --------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTV 172
Query: 148 YYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRI 196
Y PE + + + S D+W +GCI M GK P N + L I
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 232
Query: 197 VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ + + F + +D L+ D++ L DP +RI+ E L Y +
Sbjct: 233 IDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 25/212 (11%)
Query: 14 SMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY-QVNDLAYLLKYPKDSMNGY---- 68
++ E + L ++NHP++I+L SQ L + EY + L L+ + GY
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 69 -----STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
S+ + T L+ + RDL NILV +G+ +K
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMK 190
Query: 124 VAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE-----YSTAVDIWPVGCIFGEMV 178
++ FGL++ +Y E + V + P + + Y+T D+W G + E+V
Sbjct: 191 ISDFGLSRDVY----EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 179 S--GKPLFPG--ANSLITLGRIVGKSRKPSFC 206
+ G P +PG L L + + +P C
Sbjct: 247 TLGGNP-YPGIPPERLFNLLKTGHRMERPDNC 277
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 31/212 (14%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEY-QVNDLAYLLKYPKDSMNG 67
E RE L L H +I+R V ++G L VFEY + DL L+
Sbjct: 84 ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ + L+ G ++ RDL N LV G VK+ F
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDF 202
Query: 128 GLAKSLYAYKGESSAEVGTHYYKA------------PELLLGLLEYSTAVDIWPVGCIFG 175
G+++ +Y+ T YY+ PE +L +++T D+W G +
Sbjct: 203 GMSRDIYS----------TDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLW 251
Query: 176 EMVS--GKPLFPGANS----LITLGRIVGKSR 201
E+ + +P + +N+ IT GR + + R
Sbjct: 252 EIFTYGKQPWYQLSNTEAIDCITQGRELERPR 283
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 73 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 129
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 130 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 177
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ +Y + +S + L L+ ++T D+W G + E M G P
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 238 YPDVNTFDITVYLLQGRRLLQPEYC 262
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 203
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 204 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 245
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 246 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 29/164 (17%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSA------------EVGTHYYKA 151
+ RDLKP NI +D VKV FGL ++ + E + +VGT Y +
Sbjct: 186 MHRDLKPSNIFFTMDD-VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 152 PELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLR 211
PE + G YS VDI+ +G I E++ ++ + RI+ R F L
Sbjct: 245 PEQIHG-NNYSHKVDIFSLGLILFELLY------SFSTQMERVRIITDVRNLKFPLL--- 294
Query: 212 DHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
F P ++ ML P +R A + ++ F+++
Sbjct: 295 ------FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 78 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 134
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 135 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 182
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ +Y + +S + L L+ ++T D+W G + E M G P
Sbjct: 183 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 242
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 243 YPDVNTFDITVYLLQGRRLLQPEYC 267
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 30 IIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFX 89
IIRL Y+Y V E DL LK K S++ + K++ L + +
Sbjct: 90 IIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 90 XXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--SSAEVGTH 147
+ DLKP N L+ +DG +K+ FG+A + ++VGT
Sbjct: 149 --------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTV 192
Query: 148 YYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRI 196
Y PE + + + S D+W +GCI M GK P N + L I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 197 VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ + + F + +D L+ D++ L DP +RI+ E L Y +
Sbjct: 253 IDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 132 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 188
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 189 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 236
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ +Y + +S + L L+ ++T D+W G + E M G P
Sbjct: 237 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 297 YPDVNTFDITVYLLQGRRLLQPEYC 321
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 46 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--YGNLLDYLREC 101
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 102 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 150
Query: 125 AGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
A FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 151 ADFGLSRLM---TGDTFTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 206
Query: 180 GKPLFPGAN 188
G +PG +
Sbjct: 207 GMSPYPGID 215
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVL---E 198
Query: 138 GESSAEVGTH------YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ A T + +PE + ++++A D+W G + E++S
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 23/213 (10%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY + LL + K Y
Sbjct: 54 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYM--NKGSLLDFLKGETGKY--- 107
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 108 -------LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 159
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 160 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGF 218
+ L ++ R P C SL D + +
Sbjct: 217 VNREVLDQVERGYRMPCPPECPESLHDLMCQCW 249
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 130
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L
Sbjct: 131 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 189
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 190 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 202
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 203 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 244
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 245 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 30 IIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFX 89
IIRL Y+Y V E DL LK K S++ + K++ L + +
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGI 176
Query: 90 XXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--SSAEVGTH 147
+ DLKP N L+ +DG +K+ FG+A + ++VGT
Sbjct: 177 --------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTV 220
Query: 148 YYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRI 196
Y PE + + + S D+W +GCI M GK P N + L I
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 197 VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ + + F + +D L+ D++ L DP +RI+ E L Y +
Sbjct: 281 IDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 197
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 198 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 239
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 240 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 140
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L +
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVL---E 196
Query: 138 GESSAEVGTH------YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ A T + +PE + ++++A D+W G + E++S
Sbjct: 197 DDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 31/212 (14%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNG 67
E RE L L H +I+R V ++G L VFEY + DL L+
Sbjct: 55 ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 114
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ + L+ G ++ RDL N LV G VK+ F
Sbjct: 115 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDF 173
Query: 128 GLAKSLYAYKGESSAEVGTHYYKA------------PELLLGLLEYSTAVDIWPVGCIFG 175
G+++ +Y+ T YY+ PE +L +++T D+W G +
Sbjct: 174 GMSRDIYS----------TDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLW 222
Query: 176 EMVS--GKPLFPGANS----LITLGRIVGKSR 201
E+ + +P + +N+ IT GR + + R
Sbjct: 223 EIFTYGKQPWYQLSNTEAIDCITQGRELERPR 254
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 49 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 98
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 99 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 153
Query: 123 KVAGFGLAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
K+ FGL K L +K + E +Y APE L ++S A D+W G + E+
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYELF 211
Query: 179 S 179
+
Sbjct: 212 T 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 113
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L +
Sbjct: 114 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVL---E 169
Query: 138 GESSAEVGTH------YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ A T + +PE + ++++A D+W G + E++S
Sbjct: 170 DDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 53 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--YGNLLDYLREC 108
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 109 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 157
Query: 125 AGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
A FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 158 ADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 213
Query: 180 GKPLFPGAN 188
G +PG +
Sbjct: 214 GMSPYPGID 222
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 48 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--YGNLLDYLREC 103
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 104 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 152
Query: 125 AGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
A FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 153 ADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 180 GKPLFPGAN 188
G +PG +
Sbjct: 209 GMSPYPGID 217
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 30 IIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFX 89
IIRL Y+Y V E DL LK K S++ + K++ L + +
Sbjct: 90 IIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 90 XXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--SSAEVGTH 147
+ DLKP N L+ +DG +K+ FG+A + ++VGT
Sbjct: 149 --------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTV 192
Query: 148 YYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRI 196
Y PE + + + S D+W +GCI M GK P N + L I
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 197 VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ + + F + +D L+ D++ L DP +RI+ E L Y +
Sbjct: 253 IDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 23/207 (11%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K Y
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGETGKY--- 276
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 277 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 328
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 329 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRD 212
+ L ++ R P C SL D
Sbjct: 386 VNREVLDQVERGYRMPCPPECPESLHD 412
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 196
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 238
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 239 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 204
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 205 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 246
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 247 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 23/213 (10%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K Y
Sbjct: 50 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGETGKY--- 103
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 104 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 155
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 156 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 212
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRDHLTNGF 218
+ L ++ R P C SL D + +
Sbjct: 213 VNREVLDQVERGYRMPCPPECPESLHDLMCQCW 245
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 23/207 (11%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K Y
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGETGKY--- 276
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 277 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 328
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 329 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRD 212
+ L ++ R P C SL D
Sbjct: 386 VNREVLDQVERGYRMPCPPECPESLHD 412
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 31/212 (14%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNG 67
E RE L L H +I+R V ++G L VFEY + DL L+
Sbjct: 61 ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 120
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ + L+ G ++ RDL N LV G VK+ F
Sbjct: 121 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-QGLVVKIGDF 179
Query: 128 GLAKSLYAYKGESSAEVGTHYYKA------------PELLLGLLEYSTAVDIWPVGCIFG 175
G+++ +Y+ T YY+ PE +L +++T D+W G +
Sbjct: 180 GMSRDIYS----------TDYYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLW 228
Query: 176 EMVS--GKPLFPGANS----LITLGRIVGKSR 201
E+ + +P + +N+ IT GR + + R
Sbjct: 229 EIFTYGKQPWYQLSNTEAIDCITQGRELERPR 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDS 64
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 48 EDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--YGNLLDYLREC 103
Query: 65 MNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKV 124
N S + + +I RDL N LV + VKV
Sbjct: 104 -------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVG-ENHLVKV 152
Query: 125 AGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS- 179
A FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 153 ADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATY 208
Query: 180 GKPLFPGAN 188
G +PG +
Sbjct: 209 GMSPYPGID 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 198
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 240
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 241 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 93/237 (39%), Gaps = 42/237 (17%)
Query: 30 IIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFX 89
IIRL Y+Y V E DL LK K S++ + K++ L + +
Sbjct: 71 IIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGI 129
Query: 90 XXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--SSAEVGTH 147
+ DLKP N L+ +DG +K+ FG+A + ++VGT
Sbjct: 130 --------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTV 173
Query: 148 YYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANSLITLGRI 196
Y PE + + + S D+W +GCI M GK P N + L I
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 197 VGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFK 253
+ + + F + +D L+ D++ L DP +RI+ E L Y +
Sbjct: 234 IDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 242
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 243 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 284
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 285 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL + L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLGRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPNII L V ++ + + EY N S++ + KN
Sbjct: 57 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMEN----------GSLDAFLRKNDGR 106
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL NILV+ KV+ FG+++ L
Sbjct: 107 ---FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVN-SNLVCKVSDFGMSRVLED 162
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + APE + ++++A D+W G + E++S
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 248
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 249 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 290
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 291 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPNII L V ++ + + EY N S++ + KN
Sbjct: 63 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMEN----------GSLDAFLRKNDGR 112
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL NILV+ KV+ FG+++ L
Sbjct: 113 ---FTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVN-SNLVCKVSDFGMSRVLED 168
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + APE + ++++A D+W G + E++S
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 52 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 101
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y +++ + + ++ GT RYI RDL NILV+ + + V
Sbjct: 102 SLRDY----LQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 156
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 198
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 199 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 240
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 241 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 23/207 (11%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K Y
Sbjct: 306 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSK--GSLLDFLKGETGKY--- 359
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 360 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 411
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 412 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRD 212
+ L ++ R P C SL D
Sbjct: 469 VNREVLDQVERGYRMPCPPECPESLHD 495
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 28/158 (17%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 212
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+ + P + ++S +
Sbjct: 213 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVSEEVKM 270
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYF 252
LI +L +P +R+T E + +
Sbjct: 271 -------------LIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 54 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 103
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 104 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 158
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 159 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQ---GIYLYPVFEYQVNDLAYLLKYPKDSM 65
+ + + E S + +L H N+++L+ V + G+Y+ + + + + YL + +
Sbjct: 55 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 114
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVA 125
G F S + +E G ++ RDL N+LV D KV+
Sbjct: 115 GGDCLLKF-SLDVCEAMEYLE-------------GNNFVHRDLAARNVLVSED-NVAKVS 159
Query: 126 GFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLF 184
FGL K + + V + APE L ++ST D+W G + E+ S G+ +
Sbjct: 160 DFGLTKEASSTQDTGKLPVK---WTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPY 215
Query: 185 P 185
P
Sbjct: 216 P 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 50 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 99
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI R+L NILV+ + + V
Sbjct: 100 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRNLATRNILVENENR-V 154
Query: 123 KVAGFGLAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
K+ FGL K L YK + E +Y APE L ++S A D+W G + E+
Sbjct: 155 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTE-SKFSVASDVWSFGVVLYELF 212
Query: 179 S 179
+
Sbjct: 213 T 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 47 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 96
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 97 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 151
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 152 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLL 159
Y+ RDL+ NILV + KVA FGLA+ + E +A G + + APE L
Sbjct: 125 YVHRDLRAANILVG-ENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAAL-YG 180
Query: 160 EYSTAVDIWPVGCIFGEMVS-GKPLFPGANSLITLGRIVGKSRKPS--FCKLSLRDHLTN 216
++ D+W G + E+ + G+ +PG + L ++ R P C SL D +
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 240
Query: 217 GF 218
+
Sbjct: 241 CW 242
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 52 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 101
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 102 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 156
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 38/169 (22%)
Query: 118 DGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEM 177
D VK+A G A ++ + E ++ T Y++ E+L+G YST DIW C+ E+
Sbjct: 223 DKIRVKIADLGNACWVHKHFTE---DIQTRQYRSIEVLIGA-GYSTPADIWSTACMAFEL 278
Query: 178 VSGKPLFPG-------------ANSLITLGRI------VGKSRKPSFCKLSLRDHLTN-- 216
+G LF A+ + LG I GK + F + H+T
Sbjct: 279 ATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLK 338
Query: 217 ------------GFPGLEPAGI-DLISKMLGMDPDKRITAAEALQQEYF 252
G+P + A D + ML M P+KR +A E L+ +
Sbjct: 339 PWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWL 387
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 42/244 (17%)
Query: 23 MELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTF 82
++ + IIRL Y+Y V E DL LK K S++ + K++ L
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVH 169
Query: 83 LLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--S 140
+ + + DLKP N L+ +DG +K+ FG+A +
Sbjct: 170 TIHQHGI--------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVK 213
Query: 141 SAEVGTHYYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS 189
++VGT Y PE + + + S D+W +GCI M GK P N
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
+ L I+ + + F + +D L+ D++ L DP +RI+ E L
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAH 321
Query: 250 EYFK 253
Y +
Sbjct: 322 PYVQ 325
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 23/207 (11%)
Query: 12 PSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTK 71
P + ++E + +L H +++L V S+ +Y V EY LL + K Y
Sbjct: 223 PEAFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVGEYMSK--GSLLDFLKGETGKY--- 276
Query: 72 NFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAK 131
LV+ Y+ RDL+ NILV + KVA FGLA+
Sbjct: 277 -------LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-ENLVCKVADFGLAR 328
Query: 132 SLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGA 187
+ E +A G + + APE L ++ D+W G + E+ + G+ +PG
Sbjct: 329 LI--EDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385
Query: 188 NSLITLGRIVGKSRKPS--FCKLSLRD 212
+ L ++ R P C SL D
Sbjct: 386 VNREVLDQVERGYRMPCPPECPESLHD 412
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 49 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 98
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 99 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 153
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPK-DSMNGYSTKNFN 74
EV C + +HPNII L+ YLY EY N L +L K ++ ++ N
Sbjct: 74 EVLCKLG-HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 132
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
+ +L + LL F + +I R+L NILV + K+A FGL++
Sbjct: 133 ASTLSSQQLL--HFAADVARGMDYLSQKQFIHRNLAARNILVG-ENYVAKIADFGLSRGQ 189
Query: 134 YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
Y ++ + + L + Y+T D+W G + E+VS
Sbjct: 190 EVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVS 233
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 80 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 129
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 130 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 184
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 185 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 53 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 102
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 103 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 157
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 158 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 67 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 116
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 117 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 171
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 230
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPKD 63
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 253 DTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 310
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
+N +L+ +I R+L N LV + VK
Sbjct: 311 EVNA--------------VVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG-ENHLVK 355
Query: 124 VAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
VA FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 356 VADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIAT 411
Query: 180 -GKPLFPG 186
G +PG
Sbjct: 412 YGMSPYPG 419
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 49 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 98
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 99 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 153
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 154 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 212
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG-ESSAEVGTHYYKAPELLLGLLEY 161
Y+ RD+KP NIL+D G +++A FG L A S VGT Y +PE+L +
Sbjct: 183 YVHRDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 162 STA------VDIWPVGCIFGEMVSGKPLFPGANSLITLGRIV 197
D W +G EM G+ F ++ T G+IV
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 56 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 105
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 106 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 160
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 161 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 48 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 97
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 98 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 152
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 153 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 55 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 104
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 105 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 159
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 160 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ + T YY APE+L G +Y
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEP-CYTPYYVAPEVL-GPEKYDK 196
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D+W +G I ++ G P F PG + I +G+
Sbjct: 197 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY------------------ 238
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAEALQQEYF 252
FP E + + LI +L +P +R+T E + +
Sbjct: 239 --EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 28/188 (14%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLLKYPKD 63
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ N L YL + +
Sbjct: 295 DTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 352
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
+N +L+ +I R+L N LV + VK
Sbjct: 353 EVNA--------------VVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG-ENHLVK 397
Query: 124 VAGFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
VA FGL++ + G++ +A G + + APE L ++S D+W G + E+ +
Sbjct: 398 VADFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIAT 453
Query: 180 -GKPLFPG 186
G +PG
Sbjct: 454 YGMSPYPG 461
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQ---GIYLYPVFEYQVNDLAYLLKYPKDSM 65
+ + + E S + +L H N+++L+ V + G+Y+ + + + + YL + +
Sbjct: 40 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 99
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVA 125
G F S + +E G ++ RDL N+LV D KV+
Sbjct: 100 GGDCLLKF-SLDVCEAMEYLE-------------GNNFVHRDLAARNVLVSEDN-VAKVS 144
Query: 126 GFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLF 184
FGL K + + V + APE L ++ST D+W G + E+ S G+ +
Sbjct: 145 DFGLTKEASSTQDTGKLPVK---WTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPY 200
Query: 185 P 185
P
Sbjct: 201 P 201
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L +++Y P
Sbjct: 67 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEYLPYG 116
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 117 SLRDYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 171
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 172 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQ---GIYLYPVFEYQVNDLAYLLKYPKDSM 65
+ + + E S + +L H N+++L+ V + G+Y+ + + + + YL + +
Sbjct: 46 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 105
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVA 125
G F S + +E G ++ RDL N+LV D KV+
Sbjct: 106 GGDCLLKF-SLDVCEAMEYLE-------------GNNFVHRDLAARNVLVSED-NVAKVS 150
Query: 126 GFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLF 184
FGL K + + V + APE L +ST D+W G + E+ S G+ +
Sbjct: 151 DFGLTKEASSTQDTGKLPVK---WTAPEALRE-AAFSTKSDVWSFGILLWEIYSFGRVPY 206
Query: 185 P 185
P
Sbjct: 207 P 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 9 EGVPSSMIREVSCLMELNHPNIIRLMRVASQ---GIYLYPVFEYQVNDLAYLLKYPKDSM 65
+ + + E S + +L H N+++L+ V + G+Y+ + + + + YL + +
Sbjct: 227 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL 286
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVA 125
G F S + +E G ++ RDL N+LV D KV+
Sbjct: 287 GGDCLLKF-SLDVCEAMEYLE-------------GNNFVHRDLAARNVLVSEDN-VAKVS 331
Query: 126 GFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLF 184
FGL K + + V + APE L ++ST D+W G + E+ S G+ +
Sbjct: 332 DFGLTKEASSTQDTGKLPVK---WTAPEALRE-KKFSTKSDVWSFGILLWEIYSFGRVPY 387
Query: 185 P 185
P
Sbjct: 388 P 388
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 107 DLKPVNILVDLDGKT----VKVAGFGLAKSLYAYKGESSAEV----GTHYYKAPELL--- 155
DLKP NI++ LD +K+ FGLA + E E GT + APE++
Sbjct: 140 DLKPENIML-LDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 156 -LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
LGL D+W +G I ++SG F G TL I S D
Sbjct: 194 PLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY----------DFD 238
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVPGRS 259
F D I K+L + KR+T EAL+ + V +
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLL 84
N P +++L YLY V EY DL L+ N++ + F
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS------------NYDVPEKWARFYT 179
Query: 85 VEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG--ESSA 142
E F I RD+KP N+L+D G +K+A FG + +G
Sbjct: 180 AEVVLALDAIHSMGF----IHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDT 233
Query: 143 EVGTHYYKAPELLL---GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK 199
VGT Y +PE+L G Y D W VG EM+ G F + + T +I+
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Query: 200 SRKPSF 205
+F
Sbjct: 294 KNSLTF 299
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLL 84
N P +++L YLY V EY DL L+ N++ + F
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS------------NYDVPEKWARFYT 179
Query: 85 VEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG--ESSA 142
E F I RD+KP N+L+D G +K+A FG + +G
Sbjct: 180 AEVVLALDAIHSMGF----IHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDT 233
Query: 143 EVGTHYYKAPELLL---GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK 199
VGT Y +PE+L G Y D W VG EM+ G F + + T +I+
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 293
Query: 200 SRKPSF 205
+F
Sbjct: 294 KNSLTF 299
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V EY N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV ++ RDL NIL++ KV+ FGL++ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 107 DLKPVNILVDLDGKT----VKVAGFGLAKSLYAYKGESSAEV----GTHYYKAPELL--- 155
DLKP NI++ LD +K+ FGLA + E E GT + APE++
Sbjct: 140 DLKPENIML-LDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 156 -LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
LGL D+W +G I ++SG F G TL I S D
Sbjct: 194 PLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY----------DFD 238
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVPGRS 259
F D I K+L + KR+T EAL+ + V +
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 179 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 232
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 279
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 280 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 135 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 188
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 189 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 235
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 236 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 185
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 232
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 233 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 72/186 (38%), Gaps = 24/186 (12%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLL 84
N P +++L YLY V EY DL L+ N++ + F
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS------------NYDVPEKWARFYT 174
Query: 85 VEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG--ESSA 142
E F I RD+KP N+L+D G +K+A FG + +G
Sbjct: 175 AEVVLALDAIHSMGF----IHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDT 228
Query: 143 EVGTHYYKAPELLL---GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK 199
VGT Y +PE+L G Y D W VG EM+ G F + + T +I+
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288
Query: 200 SRKPSF 205
+F
Sbjct: 289 KNSLTF 294
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 105 RRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK--GESSAEVGTHYYKAPELLLGLLEYS 162
RD+K N+L+ + T +A FGLA A K G++ +VGT Y APE+L G + +
Sbjct: 154 HRDIKSKNVLLK-NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQ 212
Query: 163 T----AVDIWPVGCIFGEMVS 179
+D++ +G + E+ S
Sbjct: 213 RDAFLRIDMYAMGLVLWELAS 233
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 107 DLKPVNILVDLDGKT----VKVAGFGLAKSLYAYKGESSAEV----GTHYYKAPELL--- 155
DLKP NI++ LD +K+ FGLA + E E GT + APE++
Sbjct: 140 DLKPENIML-LDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 156 -LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
LGL D+W +G I ++SG F G TL I S D
Sbjct: 194 PLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY----------DFD 238
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVPGRS 259
F D I K+L + KR+T EAL+ + V +
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 137 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 190
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 237
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 238 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 107 DLKPVNILVDLDGKT----VKVAGFGLAKSLYAYKGESSAEV----GTHYYKAPELL--- 155
DLKP NI++ LD +K+ FGLA + E E GT + APE++
Sbjct: 140 DLKPENIML-LDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 156 -LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
LGL D+W +G I ++SG F G TL I S D
Sbjct: 194 PLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY----------DFD 238
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVPGRS 259
F D I K+L + KR+T EAL+ + V +
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 136 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 189
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 236
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 237 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 137 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 190
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 237
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 238 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 179 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 232
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 279
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 280 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 43/216 (19%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYP------VFEYQVNDLAYLLKYPKDSMN 66
+ +RE + LNHPN++ L+ GI L P + Y + LL++ +
Sbjct: 67 EAFLREGLLMRGLNHPNVLALI-----GIMLPPEGLPHVLLPYMCH--GDLLQFIRSPQR 119
Query: 67 GYSTKNFNSYSLFTTF---LLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVK 123
+ K+ S+ L L E+ +++ RDL N ++D + TVK
Sbjct: 120 NPTVKDLISFGLQVARGMEYLAEQ--------------KFVHRDLAARNCMLD-ESFTVK 164
Query: 124 VAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
VA FGLA+ + Y+ + A + + L ++T D+W G + E++
Sbjct: 165 VADFGLARDILDREYYSVQQHRHARLPVKWTALES--LQTYRFTTKSDVWSFGVLLWELL 222
Query: 179 S-GKPLFPGANSLITLGRIVGKSRK---PSFCKLSL 210
+ G P + + L + + R+ P +C SL
Sbjct: 223 TRGAPPYRHIDPF-DLTHFLAQGRRLPQPEYCPDSL 257
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 137 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 190
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 191 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 237
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 238 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 136 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 189
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 190 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 236
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 237 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 164 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 217
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 264
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 265 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 107 DLKPVNILVDLD-GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAV 165
D++P NI+ T+K+ FG A+ L YY APE+ + STA
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYY-APEVHQHDV-VSTAT 184
Query: 166 DIWPVGCIFGEMVSG-KPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPA 224
D+W +G + ++SG P N I + I+ + +F + F +
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQI-IENIMNA--EYTFDE--------EAFKEISIE 233
Query: 225 GIDLISKMLGMDPDKRITAAEALQQEYFKDVPGR 258
+D + ++L + R+TA+EALQ + K R
Sbjct: 234 AMDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 151 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 204
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 251
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 252 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLG---- 157
+ I RD+K N+L+ + VK+ FG++ L G + +GT Y+ APE++
Sbjct: 149 KVIHRDIKGQNVLL-TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 158 LLEYSTAVDIWPVGCIFGEMVSGKP 182
Y D+W +G EM G P
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 185
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSSECQ------------ 232
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 233 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 171 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 224
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 271
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 272 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 152 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 205
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSSECQ------------ 252
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 253 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL----LGLL 159
I RD+KP NIL+D G+ +K+ FG++ L K + + G Y APE +
Sbjct: 147 IHRDVKPSNILLDERGQ-IKLCDFGISGRLVDDKAKDRS-AGCAAYMAPERIDPPDPTKP 204
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGAN 188
+Y D+W +G E+ +G+ FP N
Sbjct: 205 DYDIRADVWSLGISLVELATGQ--FPYKN 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPN+I L V ++ + + E+ N S++ + +N
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN----------GSLDSFLRQNDGQ 131
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL NILV+ KV+ FGL++ L
Sbjct: 132 ---FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN-SNLVCKVSDFGLSRFLED 187
Query: 136 YKGE---SSAEVGT--HYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ +SA G + APE + ++++A D+W G + E++S
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPE-AIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 165 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 218
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSSECQ------------ 265
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 266 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 165 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 218
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSSECQ------------ 265
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 266 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 33/165 (20%)
Query: 107 DLKPVNILVDLDGKT----VKVAGFGLAKSLYAYKGESSAEV----GTHYYKAPELL--- 155
DLKP NI++ LD +K+ FGLA + E E GT + APE++
Sbjct: 140 DLKPENIML-LDKNIPIPHIKLIDFGLAHEI-----EDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 156 -LGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
LGL D+W +G I ++SG F G TL I S D
Sbjct: 194 PLGL-----EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY----------DFD 238
Query: 215 TNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDVPGRS 259
F D I K+L + KR+T EAL+ + V +
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ 283
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 164 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 217
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSSECQ------------ 264
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 265 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 164 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 217
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R S C+
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSSECQ------------ 264
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 265 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSM 65
+TME ++E + + E+ HPN+++L+ V ++ Y + E+ LL Y ++
Sbjct: 256 DTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT--YGNLLDYLREC- 310
Query: 66 NGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVA 125
N S + + +I R+L N LV + VKVA
Sbjct: 311 ------NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVG-ENHLVKVA 360
Query: 126 GFGLAKSLYAYKGES-SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-G 180
FGL++ + G++ +A G + + APE L ++S D+W G + E+ + G
Sbjct: 361 DFGLSRLM---TGDTYTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYG 416
Query: 181 KPLFPG 186
+PG
Sbjct: 417 MSPYPG 422
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 106 RDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK----GESS----AEVGTHYYKAPELLLG 157
RDL N+LV DG V ++ FGL+ L + GE +EVGT Y APE+L G
Sbjct: 144 RDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202
Query: 158 ---LLEYSTA---VDIWPVGCIFGEM-VSGKPLFPG 186
L + +A VD++ +G I+ E+ + LFPG
Sbjct: 203 AVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 106 RDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK--GESSAEVGTHYYKAPELLLGLLEYST 163
RD K N+L+ D V +A FGLA K G++ +VGT Y APE+L G + +
Sbjct: 147 RDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQR 205
Query: 164 ----AVDIWPVGCIFGEMVS 179
+D++ +G + E+VS
Sbjct: 206 DAFLRIDMYAMGLVLWELVS 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 11/167 (6%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKN 72
+ +REV+ + L HPNI+ M +Q L V EY Y L + +G +
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH----KSGAREQL 134
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKS 132
L + + + + RDLK N+LVD TVKV FGL++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNR-----NPPIVHRDLKSPNLLVD-KKYTVKVCDFGLSRL 188
Query: 133 LYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ S GT + APE+L + D++ G I E+ +
Sbjct: 189 KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 22/167 (13%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL--AYLLKYPKDSMNGYSTKNFNS 75
E S + + +HPN++ L V ++G + V E+ N A+L K+
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-------------- 139
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL NILV+ KV+ FGL++ +
Sbjct: 140 -GQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVN-SNLVCKVSDFGLSRVIED 197
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
G + APE + ++++A D+W G + E++S
Sbjct: 198 DPEAVYTTTGGKIPVRWTAPE-AIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 42/244 (17%)
Query: 23 MELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTF 82
++ + IIRL Y+Y V E DL LK K S++ + K++ L
Sbjct: 111 LQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVH 169
Query: 83 LLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGE--S 140
+ + + DLKP N L+ +DG +K+ FG+A +
Sbjct: 170 TIHQHGI--------------VHSDLKPANFLI-VDG-MLKLIDFGIANQMQPDTTSVVK 213
Query: 141 SAEVGTHYYKAPELLLGL----------LEYSTAVDIWPVGCIFGEMVSGK-PLFPGANS 189
++VG Y PE + + + S D+W +GCI M GK P N
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 190 LITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLISKMLGMDPDKRITAAEALQQ 249
+ L I+ + + F + +D L+ D++ L DP +RI+ E L
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKD--------LQ----DVLKCCLKRDPKQRISIPELLAH 321
Query: 250 EYFK 253
Y +
Sbjct: 322 PYVQ 325
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 5 HNTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKY-PKD 63
H+T E + RE+ L L H NI++ V + +L ++++ P
Sbjct: 52 HSTEEHL-RDFEREIEILKSLQHDNIVKYKGVC---------YSAGRRNLKLIMEFLPYG 101
Query: 64 SMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGT-RYIRRDLKPVNILVDLDGKTV 122
S+ Y K+ ++ GT RYI RDL NILV+ + + V
Sbjct: 102 SLREYLQKHKERIDHIKLL----QYTSQICKGMEYLGTKRYIHRDLATRNILVENENR-V 156
Query: 123 KVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
K+ FGL K L K E G ++ APE L ++S A D+W G + E+ +
Sbjct: 157 KIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFT 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE--VGTHYYKAPEL--LLGLL 159
I RDLK NI + D TVK+ FGLA + G E G+ + APE+ +
Sbjct: 142 IHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK-SRKPSFCKL 208
YS D++ G + E+++G+ + N+ + +VG+ S P K+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 250
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE--VGTHYYKAPEL--LLGLL 159
I RDLK NI + D TVK+ FGLA + G E G+ + APE+ +
Sbjct: 142 IHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK-SRKPSFCKL 208
YS D++ G + E+++G+ + N+ + +VG+ S P K+
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 250
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 10 GVPSSMIREVSCLMELNHPNIIRLMRVA--SQGIYLYPVFEYQVNDLAYLLKYPKDSMNG 67
G S + E + + +HPN++ L+ + S+G L + + DL + ++ +
Sbjct: 74 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR---NFIRNETHN 130
Query: 68 YSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGF 127
+ K+ + L +++ RDL N ++D + TVKVA F
Sbjct: 131 PTVKDLIGFGL-----------QVAKGMKFLASKKFVHRDLAARNCMLD-EKFTVKVADF 178
Query: 128 GLAKSLYAYKGESSAEVGTHYYKAPELLLGLLE---YSTAVDIWPVGCIFGE-MVSGKPL 183
GLA+ + + +S + L L+ ++T D+W G + E M G P
Sbjct: 179 GLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
Query: 184 FPGANSL-ITLGRIVGKS-RKPSFC 206
+P N+ IT+ + G+ +P +C
Sbjct: 239 YPDVNTFDITVYLLQGRRLLQPEYC 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V E N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 72/188 (38%), Gaps = 11/188 (5%)
Query: 27 HPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLL 84
H NII L+ +Q LY + EY + N YL M N T L
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 85 VEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV 144
V + I RDL N+LV + +K+A FGLA+ +
Sbjct: 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLV-TENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 145 GTHYYK--APELLLGLLEYSTAVDIWPVGCIFGEMVS--GKPLFPG--ANSLITLGRIVG 198
G K APE L + Y+ D+W G + E+ + G P +PG L L +
Sbjct: 219 GRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLLKEGH 276
Query: 199 KSRKPSFC 206
+ KP+ C
Sbjct: 277 RMDKPANC 284
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + HPNIIRL V + + + + E+ N +++ + N
Sbjct: 65 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMEN----------GALDSFLRLNDGQ 114
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL NILV+ KV+ FGL++ L
Sbjct: 115 ---FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVN-SNLVCKVSDFGLSRFLEE 170
Query: 136 YKGE--SSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ ++ +G + APE + ++++A D W G + E++S
Sbjct: 171 NSSDPTETSSLGGKIPIRWTAPE-AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 106 RDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK-GESSAEVGTHYYKAPELLLGLLEYSTA 164
RD+KP NILV D V FG+A + K + VGT YY APE +
Sbjct: 158 RDVKPENILVSADDFAYLV-DFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATYR 215
Query: 165 VDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPA 224
DI+ + C+ E ++G P + G + I +PS + PG+ A
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVR-----------PGIPVA 264
Query: 225 GIDLISKMLGMDPDKR 240
+I++ +P+ R
Sbjct: 265 FDAVIARGXAKNPEDR 280
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 185
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 232
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 233 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY-----AYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ +Y KG++ + + APE +
Sbjct: 219 KCIHRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK---WMAPESIF 274
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS--GKPLFPGAN 188
+ YST D+W G + E+ S G P +PG
Sbjct: 275 DKI-YSTKSDVWSYGVLLWEIFSLGGSP-YPGVQ 306
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 23/191 (12%)
Query: 13 SSMIREVSCLMEL-NHPNIIRLMRVASQGIYLYPVFEYQV--NDLAYLL----KYPKDSM 65
+++ E+ + +L +H NI+ L+ + +Y +FEY + L YL K+ +D +
Sbjct: 93 EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 66 NGYSTKNFNSYSLFT--TF--LLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKT 121
+ K TF LL + F + + RDL N+LV GK
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARNVLV-THGKV 210
Query: 122 VKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGE 176
VK+ FGLA+ + Y +G + V + APE L + Y+ D+W G + E
Sbjct: 211 VKICDFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGI-YTIKSDVWSYGILLWE 266
Query: 177 MVS-GKPLFPG 186
+ S G +PG
Sbjct: 267 IFSLGVNPYPG 277
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V E N S++ + K+ +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMEN----------GSLDSFLRKH---DA 113
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV Y+ RDL NIL++ KV+ FGL++ L +
Sbjct: 114 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVL---E 169
Query: 138 GESSAEVGTH------YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ A T + +PE + ++++A D+W G + E++S
Sbjct: 170 DDPEAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 32/247 (12%)
Query: 2 MGIHNTMEGVPSS--MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK 59
+ I EG S I E +M+L+HP +++L V + + VFE+ + L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM--EHGCLSD 91
Query: 60 YPKDSMNGYSTKNFNSYSLFTT--FLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDL 117
Y + ++ + L +EE I RDL N LV
Sbjct: 92 YLRTQRGLFAAETLLGMCLDVCEGMAYLEE-------------ASVIHRDLAARNCLVG- 137
Query: 118 DGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIF 174
+ + +KV+ FG+ + + + ++ GT + + +PE+ YS+ D+W G +
Sbjct: 138 ENQVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLM 194
Query: 175 GEMVS-GK-PLFPGANSL----ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDL 228
E+ S GK P +NS I+ G + K R S + +H P PA L
Sbjct: 195 WEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 254
Query: 229 ISKMLGM 235
+ ++ +
Sbjct: 255 LRQLAAI 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAE--VGTHYYKAPEL--LLGLL 159
I RDLK NI + D TVK+ FGLA + G E G+ + APE+ +
Sbjct: 130 IHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGK-SRKPSFCKL 208
YS D++ G + E+++G+ + N+ + +VG+ S P K+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPNII L V ++ + + EY N S++ + KN
Sbjct: 78 LSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMEN----------GSLDAFLRKNDGR 127
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV + RDL NILV+ KV+ FG+++ L
Sbjct: 128 ---FTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVN-SNLVCKVSDFGMSRVLED 183
Query: 136 YKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + APE + ++++A D+W G + E++S
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPE-AIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 159 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 212
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 213 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 259
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 260 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLL 159
YI RDL+ NILV K+A FGLA+ + E +A G + + APE +
Sbjct: 132 YIHRDLRAANILVSA-SLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPE-AINFG 187
Query: 160 EYSTAVDIWPVGCIFGEMVS-GKPLFPGANS 189
++ D+W G + E+V+ G+ +PG ++
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 70/186 (37%), Gaps = 24/186 (12%)
Query: 26 NHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFNSYSLFTTFLL 84
N P +++L YLY V EY DL L+ N++ + F
Sbjct: 133 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS------------NYDVPEKWAKFYT 180
Query: 85 VEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG-ESSAE 143
E I RD+KP N+L+D G +K+A FG +
Sbjct: 181 AE----VVLALDAIHSMGLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTA 235
Query: 144 VGTHYYKAPELLL---GLLEYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKS 200
VGT Y +PE+L G Y D W VG EM+ G F + + T +I+
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM--D 293
Query: 201 RKPSFC 206
K S C
Sbjct: 294 HKNSLC 299
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELL-LGL 158
YI RDL+ N+LV + K+A FGLA+ + E +A G + + APE + G
Sbjct: 131 YIHRDLRAANVLVS-ESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 159 LEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSLITLGRIVGKSRKP 203
++ D+W G + E+V+ GK +PG + + + R P
Sbjct: 188 --FTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLL 159
YI RDL+ NILV K+A FGLA+ + E +A G + + APE +
Sbjct: 305 YIHRDLRAANILVSA-SLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPE-AINFG 360
Query: 160 EYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
++ D+W G + E+V+ G+ +PG
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + HPNIIRL V + + + + E+ N +++ + N
Sbjct: 63 LSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMEN----------GALDSFLRLNDGQ 112
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ RDL NILV+ KV+ FGL++ L
Sbjct: 113 ---FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVN-SNLVCKVSDFGLSRFLEE 168
Query: 136 YKGES--SAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ ++ +G + APE + ++++A D W G + E++S
Sbjct: 169 NSSDPTYTSSLGGKIPIRWTAPE-AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 78/200 (39%), Gaps = 25/200 (12%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+RE L +LNH NI++L + + + V + L ++ N Y
Sbjct: 54 QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-- 111
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL--VDLDGKTV-KVAGFGLAK 131
+ FL+V G + R++KP NI+ + DG++V K+ FG A+
Sbjct: 112 -----SEFLIVLRDVVGGMNHLRENGI--VHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
Query: 132 SLYAYKGESSAEVGTHYYKAPELLLGLL-------EYSTAVDIWPVGCIFGEMVSGKPLF 184
L + S GT Y P++ + +Y VD+W +G F +G F
Sbjct: 165 ELEDDEQFVSL-YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 185 -----PGANSLITLGRIVGK 199
P N + I GK
Sbjct: 224 RPFEGPRRNKEVMYKIITGK 243
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 2 MGIHNTMEGVPSS--MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK 59
+ I EG S I E +M+L+HP +++L V + + VFE+ + L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM--EHGCLSD 91
Query: 60 YPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
Y + + G F + +L L V E I RDL N LV +
Sbjct: 92 YLR-TQRGL----FAAETLLGMCLDVCEGMAYLEEACV------IHRDLAARNCLVG-EN 139
Query: 120 KTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGE 176
+ +KV+ FG+ + + + ++ GT + + +PE+ YS+ D+W G + E
Sbjct: 140 QVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWE 196
Query: 177 MVS-GK-PLFPGANSL----ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLIS 230
+ S GK P +NS I+ G + K R S + +H P PA L+
Sbjct: 197 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
Query: 231 KM 232
++
Sbjct: 257 QL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 2 MGIHNTMEGVPSS--MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK 59
+ I EG S I E +M+L+HP +++L V + + VFE+ + L
Sbjct: 32 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM--EHGCLSD 89
Query: 60 YPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
Y + + G F + +L L V E I RDL N LV +
Sbjct: 90 YLR-TQRGL----FAAETLLGMCLDVCEGMAYLEEACV------IHRDLAARNCLVG-EN 137
Query: 120 KTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGE 176
+ +KV+ FG+ + + + ++ GT + + +PE+ YS+ D+W G + E
Sbjct: 138 QVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWE 194
Query: 177 MVS-GK-PLFPGANSL----ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLIS 230
+ S GK P +NS I+ G + K R S + +H P PA L+
Sbjct: 195 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 254
Query: 231 KM 232
++
Sbjct: 255 QL 256
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 151 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 204
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 205 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 251
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 252 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 179 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 232
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 233 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 279
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 280 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 14 SMIREVSCLMEL-NHPNIIRLMRVASQ-GIYLYPVFEY-QVNDLAYLLKYPKDSMNGYST 70
+++ E+ L+ + +H N++ L+ ++ G L + E+ + +L+ L+ ++ Y
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y F T + + +R I RDL NIL+ + VK+ FGL
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGL 194
Query: 130 AKSLY-----AYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
A+ +Y KG++ + + APE + + Y+ D+W G + E+ S G
Sbjct: 195 ARDIYKDPDXVRKGDARLPLK---WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 184 FPGAN 188
+PG
Sbjct: 251 YPGVK 255
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 14 SMIREVSCLMEL-NHPNIIRLMRVASQ-GIYLYPVFEY-QVNDLAYLLKYPKDSMNGYST 70
+++ E+ L+ + +H N++ L+ ++ G L + E+ + +L+ L+ ++ Y
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y F T + + +R I RDL NIL+ + VK+ FGL
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGL 194
Query: 130 AKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
A+ + Y KG++ + + APE + + Y+ D+W G + E+ S G
Sbjct: 195 ARDIYKDPDYVRKGDARLPLK---WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASP 250
Query: 184 FPGAN 188
+PG
Sbjct: 251 YPGVK 255
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 14 SMIREVSCLMEL-NHPNIIRLMRVASQ-GIYLYPVFEY-QVNDLAYLLKYPKDSMNGYST 70
+++ E+ L+ + +H N++ L+ ++ G L + E+ + +L+ L+ ++ Y
Sbjct: 113 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 172
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y F T + + +R I RDL NIL+ + VK+ FGL
Sbjct: 173 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGL 231
Query: 130 AKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
A+ + Y KG++ + + APE + + Y+ D+W G + E+ S G
Sbjct: 232 ARDIYKDPDYVRKGDARLPLK---WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASP 287
Query: 184 FPGAN 188
+PG
Sbjct: 288 YPGVK 292
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 184 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 237
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 238 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 284
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 285 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 313
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 2 MGIHNTMEGVPSS--MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK 59
+ I EG S I E +M+L+HP +++L V + + VFE+ + L
Sbjct: 37 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM--EHGCLSD 94
Query: 60 YPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
Y + + G F + +L L V E I RDL N LV +
Sbjct: 95 YLR-TQRGL----FAAETLLGMCLDVCEGMAYLEEACV------IHRDLAARNCLVG-EN 142
Query: 120 KTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGE 176
+ +KV+ FG+ + + + ++ GT + + +PE+ YS+ D+W G + E
Sbjct: 143 QVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWE 199
Query: 177 MVS-GK-PLFPGANSL----ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLIS 230
+ S GK P +NS I+ G + K R S + +H P PA L+
Sbjct: 200 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 259
Query: 231 KM 232
++
Sbjct: 260 QL 261
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 13 SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKN 72
+ +REV+ + L HPNI+ M +Q L V EY Y L + +G +
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH----KSGAREQL 134
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKS 132
L + + + + R+LK N+LVD TVKV FGL++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNR-----NPPIVHRNLKSPNLLVD-KKYTVKVCDFGLSRL 188
Query: 133 LYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ S + GT + APE+L + D++ G I E+ +
Sbjct: 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 152 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 205
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 252
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 253 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 14 SMIREVSCLMEL-NHPNIIRLMRVASQ-GIYLYPVFEY-QVNDLAYLLKYPKDSMNGYST 70
+++ E+ L+ + +H N++ L+ ++ G L + E+ + +L+ L+ ++ Y
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE 137
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y F T + + +R I RDL NIL+ + VK+ FGL
Sbjct: 138 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGL 196
Query: 130 AKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
A+ + Y KG++ + + APE + + Y+ D+W G + E+ S G
Sbjct: 197 ARDIYKDPDYVRKGDARLPLK---WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASP 252
Query: 184 FPGAN 188
+PG
Sbjct: 253 YPGVK 257
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 165 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 218
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSXECQ------------ 265
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 266 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 25/200 (12%)
Query: 15 MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFN 74
+RE L +LNH NI++L + + + V + L ++ N Y
Sbjct: 54 QMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-- 111
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNIL--VDLDGKTV-KVAGFGLAK 131
+ FL+V G + R++KP NI+ + DG++V K+ FG A+
Sbjct: 112 -----SEFLIVLRDVVGGMNHLRENGI--VHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
Query: 132 SLYAYKGESSAEVGTHYYKAPELLLGLL-------EYSTAVDIWPVGCIFGEMVSGKPLF 184
L + + GT Y P++ + +Y VD+W +G F +G F
Sbjct: 165 ELEDDE-QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Query: 185 -----PGANSLITLGRIVGK 199
P N + I GK
Sbjct: 224 RPFEGPRRNKEVMYKIITGK 243
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 152 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 205
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 206 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFFRQRVSXECQ------------ 252
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 253 -------HLIRWCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y GT Y PE +
Sbjct: 165 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD------GTRVYSPPEWIRYHR 218
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 219 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSXECQ------------ 265
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 266 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 30/156 (19%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFG----LAKSLYAYKGESSAEVGTHYYKAPELLLGLL 159
+ RD+K NIL+DL+ +K+ FG L ++Y + GT Y PE +
Sbjct: 164 LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY------TDFDGTRVYSPPEWIRYHR 217
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFP 219
+ + +W +G + +MV G F +I G++ + R C+
Sbjct: 218 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG-GQVFFRQRVSXECQ------------ 264
Query: 220 GLEPAGIDLISKMLGMDPDKRITAAEALQQEYFKDV 255
LI L + P R T E + +DV
Sbjct: 265 -------HLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 101/251 (40%), Gaps = 39/251 (15%)
Query: 17 REVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK--YPKDSMNGYSTKNFN 74
RE NHPNI+RL+ Y + E A+LL + + ++ + +
Sbjct: 75 READMHRLFNHPNILRLVA--------YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKD 126
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
+ T ++ Y RDLKP NIL+ +G+ V + + ++
Sbjct: 127 KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186
Query: 135 AYKG--------ESSAEVGTHYYKAPEL--LLGLLEYSTAVDIWPVGCIFGEMVSGKPLF 184
+G + +A+ T Y+APEL + D+W +GC+ M+ G+
Sbjct: 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE--- 243
Query: 185 PGANSLITLGRIVGKSRKPSFCKLSLRDHLT-NGFPGLEPAGIDLISKMLGMDPDKR--- 240
G ++ +K L++++ L+ P A L++ M+ +DP +R
Sbjct: 244 -GPYDMVF--------QKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHI 294
Query: 241 ---ITAAEALQ 248
++ EALQ
Sbjct: 295 PLLLSQLEALQ 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 14 SMIREVSCLMEL-NHPNIIRLMRVASQ-GIYLYPVFEY-QVNDLAYLLKYPKDSMNGYST 70
+++ E+ L+ + +H N++ L+ ++ G L + E+ + +L+ L+ ++ Y
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y F T + + +R I RDL NIL+ + VK+ FGL
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGL 185
Query: 130 AKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
A+ + Y KG++ + + APE + + Y+ D+W G + E+ S G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLK---WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 184 FPGAN 188
+PG
Sbjct: 242 YPGVK 246
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 38/156 (24%)
Query: 106 RDLKPVNILVDLD--GKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
RD+KP N+L +K+ FG AK ++ ++ T YY APE+L G +Y
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYVAPEVL-GPEKYDK 242
Query: 164 AVDIWPVGCIFGEMVSGKPLF---------PGANSLITLGRIVGKSRKPSFCKLSLRDHL 214
+ D W +G I ++ G P F PG + I G+
Sbjct: 243 SCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQY------------------ 284
Query: 215 TNGFPGLEPAGID-----LISKMLGMDPDKRITAAE 245
FP E + + LI +L +P +R T E
Sbjct: 285 --EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITE 318
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 14 SMIREVSCLMEL-NHPNIIRLMRVASQ-GIYLYPVFEY-QVNDLAYLLKYPKDSMNGYST 70
+++ E+ L+ + +H N++ L+ ++ G L + E+ + +L+ L+ ++ Y
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 71 KNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTR-YIRRDLKPVNILVDLDGKTVKVAGFGL 129
+ Y F T + + +R I RDL NIL+ + VK+ FGL
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-EKNVVKICDFGL 185
Query: 130 AKSL-----YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
A+ + Y KG++ + + APE + + Y+ D+W G + E+ S G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLK---WMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASP 241
Query: 184 FPGAN 188
+PG
Sbjct: 242 YPGVK 246
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 2 MGIHNTMEGVPSS--MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK 59
+ I EG S I E +M+L+HP +++L V + + VFE+ + L
Sbjct: 54 VAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM--EHGCLSD 111
Query: 60 YPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
Y + + G F + +L L V E I RDL N LV +
Sbjct: 112 YLR-TQRGL----FAAETLLGMCLDVCEGMAYLEEACV------IHRDLAARNCLVG-EN 159
Query: 120 KTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGE 176
+ +KV+ FG+ + + + ++ GT + + +PE+ YS+ D+W G + E
Sbjct: 160 QVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWE 216
Query: 177 MVS-GK-PLFPGANSL----ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLIS 230
+ S GK P +NS I+ G + K R S + +H P PA L+
Sbjct: 217 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 276
Query: 231 KM 232
++
Sbjct: 277 QL 278
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL------YAYKGESSAEVGTHYYKAPELL 155
R + RDL NILV+ + VK+A FGLAK L Y + + + ++ APE L
Sbjct: 135 RCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL 190
Query: 156 LGLLEYSTAVDIWPVGCIFGEMVS--GKPLFPGANSLITLGRIVGKSRK-PSFCK 207
+ +S D+W G + E+ + K P A L R++G R P+ C+
Sbjct: 191 SDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL----RMMGCERDVPALCR 240
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELL-LGL 158
YI RDL+ N+LV + K+A FGLA+ + E +A G + + APE + G
Sbjct: 130 YIHRDLRAANVLVS-ESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 159 LEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSLITLGRIVGKSRKP 203
++ ++W G + E+V+ GK +PG + + + R P
Sbjct: 187 --FTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSA-EVGTH--YYKAPELLLGL 158
R + RDL NILV+ + VK+A FGLAK L K E G ++ APE L
Sbjct: 131 RCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 159 LEYSTAVDIWPVGCIFGEMVS--GKPLFPGANSLITLGRIVGKSRK-PSFCK 207
+ +S D+W G + E+ + K P A L R++G R P+ C+
Sbjct: 190 I-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL----RMMGCERDVPALCR 236
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNS 75
+ E S + + +HPN+I L V ++ + + E+ N S++ + +N
Sbjct: 56 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN----------GSLDSFLRQNDGQ 105
Query: 76 YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA 135
FT LV Y+ R L NILV+ KV+ FGL++ L
Sbjct: 106 ---FTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVN-SNLVCKVSDFGLSRFLED 161
Query: 136 YKGE---SSAEVGT--HYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ +SA G + APE + ++++A D+W G + E++S
Sbjct: 162 DTSDPTYTSALGGKIPIRWTAPE-AIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ + Y KG++ + + APE +
Sbjct: 164 KXIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIF 219
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGAN 188
+ Y+ D+W G + E+ S G +PG
Sbjct: 220 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVK 251
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 100 GTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL------YAYKGESSAEVGTHYYKAPE 153
YI RDL N+L+D D + VK+ FGLAK++ Y + + + V ++ APE
Sbjct: 152 AQHYIHRDLAARNVLLDND-RLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FWYAPE 207
Query: 154 LLLGLLEYSTAVDIWPVGCIFGEMVS 179
L ++ A D+W G E+++
Sbjct: 208 -CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 79 FTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKG 138
F F L++ I RD+K NI + +G TVK+ FGLA + G
Sbjct: 129 FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH-EGLTVKIGDFGLATVKSRWSG 187
Query: 139 ESSAE--VGTHYYKAPELLLGLLE--YSTAVDIWPVGCIFGEMVSGKPLFPGANSLITLG 194
E G+ + APE++ +S D++ G + E+++G+ + N+ +
Sbjct: 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII 247
Query: 195 RIVGKS-RKPSFCKL 208
+VG+ P KL
Sbjct: 248 FMVGRGYASPDLSKL 262
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ + Y KG++ + + APE +
Sbjct: 164 KXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIF 219
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGAN 188
+ Y+ D+W G + E+ S G +PG
Sbjct: 220 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVK 251
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELLLGLLEYST 163
I RDLK NI + +VK+ GLA A + A +GT + APE +Y
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFXAPEXYEE--KYDE 208
Query: 164 AVDIWPVG-CIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLE 222
+VD++ G C S P N+ R+ + SF K+++
Sbjct: 209 SVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAI------------ 256
Query: 223 PAGIDLISKMLGMDPDKRITAAEALQQEYFKD 254
P ++I + + D+R + + L +F++
Sbjct: 257 PEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ + Y KG++ + + APE +
Sbjct: 213 KCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIF 268
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGAN 188
+ Y+ D+W G + E+ S G +PG
Sbjct: 269 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVK 300
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ + Y KG++ + + APE +
Sbjct: 218 KCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIF 273
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGAN 188
+ Y+ D+W G + E+ S G +PG
Sbjct: 274 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVK 305
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ + Y KG++ + + APE +
Sbjct: 211 KCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIF 266
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGAN 188
+ Y+ D+W G + E+ S G +PG
Sbjct: 267 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVK 298
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL-----YAYKGESSAEVGTHYYKAPELLL 156
+ I RDL NIL+ + VK+ FGLA+ + Y KG++ + + APE +
Sbjct: 220 KCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDPDYVRKGDARLPLK---WMAPETIF 275
Query: 157 GLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGAN 188
+ Y+ D+W G + E+ S G +PG
Sbjct: 276 DRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVK 307
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL---LGLLE 160
I RD+KP N+L++ G+ VK+ FG++ L + + + G Y APE + L
Sbjct: 176 IHRDVKPSNVLINALGQ-VKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKG 233
Query: 161 YSTAVDIWPVGCIFGEMV 178
YS DIW +G E+
Sbjct: 234 YSVKSDIWSLGITMIELA 251
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E S + + +HPNIIRL V ++ + V E N S++ + K+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMEN----------GSLDSFLRKH---DA 142
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
FT LV + RDL NIL++ KV+ FGL++ L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + +PE + ++++A D+W G + E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPE-AIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL------YAYKGESSAEVGTHYYKAPELL 155
R + RDL NILV+ + VK+A FGLAK L Y + + + ++ APE L
Sbjct: 134 RCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL 189
Query: 156 LGLLEYSTAVDIWPVGCIFGEMVS--GKPLFPGANSLITLG 194
+ +S D+W G + E+ + K P A L +G
Sbjct: 190 SDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYSTKNFNS 75
E + ++HP+++RL+ G+ L P + Q+ LL+Y + + ++ +
Sbjct: 90 EALIMASMDHPHLVRLL-----GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 144
Query: 76 YSLFTT--FLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
+ + + +EE R + RDL N+LV VK+ FGLA+ L
Sbjct: 145 WCVQIAKGMMYLEE-------------RRLVHRDLAARNVLVK-SPNHVKITDFGLARLL 190
Query: 134 YAYKGESSAEVGTHYYKAPEL-LLGLLEYSTAVDIWPVGCIFGEMVS--GKP 182
+ E +A+ G K L + +++ D+W G E+++ GKP
Sbjct: 191 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL------YAYKGESSAEVGTHYYKAPELL 155
R + RDL NILV+ + VK+A FGLAK L Y + + + ++ APE L
Sbjct: 147 RCVHRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL 202
Query: 156 LGLLEYSTAVDIWPVGCIFGEMVS--GKPLFPGANSLITLG 194
+ +S D+W G + E+ + K P A L +G
Sbjct: 203 SDNI-FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEY--QVNDLAYLLKYPKDSMNGYSTKNFNS 75
E + ++HP+++RL+ G+ L P + Q+ LL+Y + + ++ +
Sbjct: 67 EALIMASMDHPHLVRLL-----GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN 121
Query: 76 YSLFTT--FLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSL 133
+ + + +EE R + RDL N+LV VK+ FGLA+ L
Sbjct: 122 WCVQIAKGMMYLEE-------------RRLVHRDLAARNVLVK-SPNHVKITDFGLARLL 167
Query: 134 YAYKGESSAEVGTHYYKAPEL-LLGLLEYSTAVDIWPVGCIFGEMVS--GKP 182
+ E +A+ G K L + +++ D+W G E+++ GKP
Sbjct: 168 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 18/165 (10%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYS 77
E + + +H NIIRL V S+ + + EY N KD
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE------------ 143
Query: 78 LFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYK 137
F+ LV Y+ RDL NILV+ KV+ FGL++ L
Sbjct: 144 -FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN-SNLVCKVSDFGLSRVLEDDP 201
Query: 138 GESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
+ G + APE + ++++A D+W G + E+++
Sbjct: 202 EATYTTSGGKIPIRWTAPE-AISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLL 159
YI RDL+ NILV K+A FGLA+ VG + + APE +
Sbjct: 299 YIHRDLRAANILVSA-SLVCKIADFGLAR------------VGAKFPIKWTAPE-AINFG 344
Query: 160 EYSTAVDIWPVGCIFGEMVS-GKPLFPG 186
++ D+W G + E+V+ G+ +PG
Sbjct: 345 SFTIKSDVWSFGILLMEIVTYGRIPYPG 372
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY--AYKGESSAEVGTHYYKAPELLLGLL 159
+++ RDL N +V D TVK+ FG+ + +Y AY + + + APE L +
Sbjct: 150 KFVHRDLAARNCMVAHDF-TVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGV 208
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
++T+ D+W G + E+ S
Sbjct: 209 -FTTSSDMWSFGVVLWEITS 227
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 12/168 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 120
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 176
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
Y+ + + L G+ ++T D+W G + E+ +
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIAT 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 67 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 124
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 180
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 239 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 133
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 189
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 248 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 2 MGIHNTMEGVPSS--MIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLK 59
+ I EG S I E +M+L+HP +++L V + + V E+ + L
Sbjct: 35 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM--EHGCLSD 92
Query: 60 YPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDG 119
Y + + G F + +L L V E I RDL N LV +
Sbjct: 93 YLR-TQRGL----FAAETLLGMCLDVCEGMAYLEEACV------IHRDLAARNCLVG-EN 140
Query: 120 KTVKVAGFGLAKSLYAYKGESSAEVGTHY---YKAPELLLGLLEYSTAVDIWPVGCIFGE 176
+ +KV+ FG+ + + + ++ GT + + +PE+ YS+ D+W G + E
Sbjct: 141 QVIKVSDFGMTR--FVLDDQYTSSTGTKFPVKWASPEVF-SFSRYSSKSDVWSFGVLMWE 197
Query: 177 MVS-GK-PLFPGANSL----ITLGRIVGKSRKPSFCKLSLRDHLTNGFPGLEPAGIDLIS 230
+ S GK P +NS I+ G + K R S + +H P PA L+
Sbjct: 198 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 231 KM 232
++
Sbjct: 258 QL 259
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 126
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 182
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + +M
Sbjct: 76 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV--LA 133
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 189
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 190 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 248 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 69 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 126
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 182
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 27/188 (14%)
Query: 1 MMGIHNTMEGVP----SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFE-YQVNDLA 55
++ + + E +P + ++E L + +HPNI+RL+ V +Q +Y V E Q D
Sbjct: 141 LVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 200
Query: 56 YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV 115
L+ + L++ I RDL N LV
Sbjct: 201 TFLR--------------TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 116 DLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHY----YKAPELLLGLLEYSTAVDIWPVG 171
+ +K++ FG+++ G +A G + APE L YS+ D+W G
Sbjct: 247 T-EKNVLKISDFGMSRE--EADGVXAASGGLRQVPVKWTAPE-ALNYGRYSSESDVWSFG 302
Query: 172 CIFGEMVS 179
+ E S
Sbjct: 303 ILLWETFS 310
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 127
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 183
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 93/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + +M
Sbjct: 66 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV--LA 123
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 179
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 238 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL---LGLLE 160
I RD+KP N+L++ G+ VK+ FG++ L + + G Y APE + L
Sbjct: 132 IHRDVKPSNVLINALGQ-VKMCDFGISGYLVDDVAK-DIDAGCKPYMAPERINPELNQKG 189
Query: 161 YSTAVDIWPVGCIFGEM 177
YS DIW +G E+
Sbjct: 190 YSVKSDIWSLGITMIEL 206
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 155
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +Y
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIY 211
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 212 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 269
Query: 191 ITLGRIV--GKSRKPSFCKLSLRDHLTNGF---PGLEPAGIDLISKM 232
L ++ G KP C L + + + P + P+ +++IS +
Sbjct: 270 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 18/227 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 63 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 120
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N V D TVK+ FG+ + +Y
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDF-TVKIGDFGMTRDIY 176
Query: 135 A---YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSL 190
Y+ + + L G+ ++T D+W G + E+ + + + G ++
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 191 ITLGRIV--GKSRKPSFCK---LSLRDHLTNGFPGLEPAGIDLISKM 232
L ++ G KP C L L P + P+ +++IS +
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 171 RLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 230 -YTHQSDVWSYGVTVWELMT 248
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 147 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 206 -YTHQSDVWSYGVTVWELMT 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 143 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 202 -YTHQSDVWSYGVTVWELMT 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 162 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 221 -YTHQSDVWSYGVTVWELMT 239
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 137 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 196 -YTHQSDVWSYGVTVWELMT 214
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 27/188 (14%)
Query: 1 MMGIHNTMEGVP----SSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFE-YQVNDLA 55
++ + + E +P + ++E L + +HPNI+RL+ V +Q +Y V E Q D
Sbjct: 141 LVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 200
Query: 56 YLLKYPKDSMNGYSTKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILV 115
L+ + L++ I RDL N LV
Sbjct: 201 TFLR--------------TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV 246
Query: 116 DLDGKTVKVAGFGLAKS----LYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVG 171
+ +K++ FG+++ +YA G +V + APE L YS+ D+W G
Sbjct: 247 T-EKNVLKISDFGMSREEADGVYAASG-GLRQVPVK-WTAPE-ALNYGRYSSESDVWSFG 302
Query: 172 CIFGEMVS 179
+ E S
Sbjct: 303 ILLWETFS 310
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 140 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 199 -YTHQSDVWSYGVTVWELMT 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 144 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 203 -YTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 144 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 203 -YTHQSDVWSYGVTVWELMT 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 138 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 197 -YTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 141 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 200 -YTHQSDVWSYGVTVWELMT 218
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 137 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 196 -YTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 139 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 198 -YTHQSDVWSYGVTVWELMT 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 139 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 198 -YTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 140 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 199 -YTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 140 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 199 -YTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 144 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 203 -YTHQSDVWSYGVTVWELMT 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 137 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 196 -YTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 137 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 196 -YTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 138 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 197 -YTHQSDVWSYGVTVWELMT 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 140 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 199 -YTHQSDVWSYGVTVWELMT 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 134 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 193 -YTHQSDVWSYGVTVWELMT 211
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 131 RLVHRDLAARNVLVK-TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 190 -YTHQSDVWSYGVTVWELMT 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FGLAK L A + E AE G K A E +L +
Sbjct: 137 RLVHRDLAARNVLVKTP-QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 196 -YTHQSDVWSYGVTVWELMT 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYKAPELL---LGLLE 160
I RD+KP N+L++ G+ VK FG++ L + + G Y APE + L
Sbjct: 159 IHRDVKPSNVLINALGQ-VKXCDFGISGYLVDDVAK-DIDAGCKPYXAPERINPELNQKG 216
Query: 161 YSTAVDIWPVGCIFGEM 177
YS DIW +G E+
Sbjct: 217 YSVKSDIWSLGITXIEL 233
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES--SAEVGTHYYKAPELLLGLL 159
+ I RD+K NIL+D + + V V FGLAK L YK A GT + APE L
Sbjct: 162 KIIHRDVKAANILLDEEFEAV-VGDFGLAK-LMDYKDXHVXXAVRGTIGHIAPE-YLSTG 218
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLF 184
+ S D++ G + E+++G+ F
Sbjct: 219 KSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 27/194 (13%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 62 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMKM-VTELA-----PLGSLLDR 110
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 111 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 166
Query: 129 LAKSLYAYKGESSAEVGTHY-----YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKP 182
L ++L + + + H + APE L +S A D W G EM + G+
Sbjct: 167 LMRAL--PQNDDHXVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
Query: 183 LFPGANSLITLGRI 196
+ G N L +I
Sbjct: 224 PWIGLNGSQILHKI 237
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 27/194 (13%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMKM-VTELA-----PLGSLLDR 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 101 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 156
Query: 129 LAKSLYAYKGESSAEVGTHY-----YKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKP 182
L ++L + + + H + APE L +S A D W G EM + G+
Sbjct: 157 LMRAL--PQNDDHXVMQEHRKVPFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 183 LFPGANSLITLGRI 196
+ G N L +I
Sbjct: 214 PWIGLNGSQILHKI 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA--YKGESSAEVGTHYYKAPELLLGLL 159
+++ RDL N +V D TVK+ FG+ + +Y Y + + + APE L +
Sbjct: 150 KFVHRDLAARNCMVAHDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV 208
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
++T+ D+W G + E+ S
Sbjct: 209 -FTTSSDMWSFGVVLWEITS 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA--YKGESSAEVGTHYYKAPELLLGLL 159
+++ RDL N +V D TVK+ FG+ + +Y Y + + + APE L +
Sbjct: 149 KFVHRDLAARNCMVAHDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV 207
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
++T+ D+W G + E+ S
Sbjct: 208 -FTTSSDMWSFGVVLWEITS 226
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 78/195 (40%), Gaps = 29/195 (14%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMK-MVTELA-----PLGSLLDR 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 101 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 156
Query: 129 LAKSL------YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GK 181
L ++L Y + + APE L +S A D W G EM + G+
Sbjct: 157 LMRALPQNDDHYVMQEHRKVPFA---WCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 182 PLFPGANSLITLGRI 196
+ G N L +I
Sbjct: 213 EPWIGLNGSQILHKI 227
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 41/197 (20%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSA-------EVGTHYYKAPELL 155
Y+ R +K +IL+ +DGK V ++G S+ ++ V + +PE+L
Sbjct: 133 YVHRSVKASHILISVDGK-VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 191
Query: 156 LGLLE-YSTAVDIWPVGCIFGEMVSGKPLF---PGANSLI-----TLGRIVGKSRKP--- 203
L+ Y DI+ VG E+ +G F P L+ T+ ++ S P
Sbjct: 192 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 251
Query: 204 -------SFCKLSLRDHLTNGFP--------------GLEPAGIDLISKMLGMDPDKRIT 242
S L D LT P P + + L +PD R +
Sbjct: 252 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 311
Query: 243 AAEALQQEYFKDVPGRS 259
A+ L +FK + R+
Sbjct: 312 ASTLLNHSFFKQIKRRA 328
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 25/193 (12%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 62 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMKM-VTELA-----PLGSLLDR 110
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 111 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 166
Query: 129 LAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
L ++L Y + +V + APE L +S A D W G EM + G+
Sbjct: 167 LMRALPQNDDHYVMQEHRKV-PFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
Query: 184 FPGANSLITLGRI 196
+ G N L +I
Sbjct: 225 WIGLNGSQILHKI 237
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 78/195 (40%), Gaps = 29/195 (14%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMKM-VTELA-----PLGSLLDR 104
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 105 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 160
Query: 129 LAKSL------YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GK 181
L ++L Y + + APE L +S A D W G EM + G+
Sbjct: 161 LMRALPQNDDHYVMQEHRKVPFA---WCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 182 PLFPGANSLITLGRI 196
+ G N L +I
Sbjct: 217 EPWIGLNGSQILHKI 231
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 41/197 (20%)
Query: 103 YIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSA-------EVGTHYYKAPELL 155
Y+ R +K +IL+ +DGK V ++G S+ ++ V + +PE+L
Sbjct: 149 YVHRSVKASHILISVDGK-VYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVL 207
Query: 156 LGLLE-YSTAVDIWPVGCIFGEMVSGKPLF---PGANSLI-----TLGRIVGKSRKP--- 203
L+ Y DI+ VG E+ +G F P L+ T+ ++ S P
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267
Query: 204 -------SFCKLSLRDHLTNGFP--------------GLEPAGIDLISKMLGMDPDKRIT 242
S L D LT P P + + L +PD R +
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327
Query: 243 AAEALQQEYFKDVPGRS 259
A+ L +FK + R+
Sbjct: 328 ASTLLNHSFFKQIKRRA 344
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 78/195 (40%), Gaps = 29/195 (14%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMK-MVTELA-----PLGSLLDR 100
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 101 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 156
Query: 129 LAKSL------YAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GK 181
L ++L Y + + APE L +S A D W G EM + G+
Sbjct: 157 LMRALPQNDDHYVMQEHRKVPFA---WCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 182 PLFPGANSLITLGRI 196
+ G N L +I
Sbjct: 213 EPWIGLNGSQILHKI 227
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 25/193 (12%)
Query: 12 PSSM---IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDLAYLLKYPKDSMNGY 68
P +M IREV+ + L+H N+IRL G+ L P + V +LA P S+
Sbjct: 56 PEAMDDFIREVNAMHSLDHRNLIRLY-----GVVLTPPMKM-VTELA-----PLGSLLDR 104
Query: 69 STKNFNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFG 128
K+ + L T L R+I RDL N+L+ VK+ FG
Sbjct: 105 LRKHQGHFLLGT---LSRYAVQVAEGMGYLESKRFIHRDLAARNLLL-ATRDLVKIGDFG 160
Query: 129 LAKSLYA----YKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPL 183
L ++L Y + +V + APE L +S A D W G EM + G+
Sbjct: 161 LMRALPQNDDHYVMQEHRKV-PFAWCAPE-SLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
Query: 184 FPGANSLITLGRI 196
+ G N L +I
Sbjct: 219 WIGLNGSQILHKI 231
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Query: 104 IRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-GTHYYKAPELLLGLLEYS 162
+ RD+K NIL+DL K+ FG L+ E + GT Y PE + ++
Sbjct: 161 VHRDIKDENILIDLRRGCAKLIDFGSGALLH---DEPYTDFDGTRVYSPPEWISRHQYHA 217
Query: 163 TAVDIWPVGCIFGEMVSGKPLFPGANSLITLGRIVGKSRKPSFCKLSLR 211
+W +G + +MV G F ++ P C L R
Sbjct: 218 LPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRR 266
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 16/226 (7%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 61 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 118
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIX 174
Query: 135 AYKGESSAEVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS-GKPLFPGANSLI 191
G + +PE L + ++T D+W G + E+ + + + G ++
Sbjct: 175 ETDXXRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 233
Query: 192 TLGRIV--GKSRKPSFCK---LSLRDHLTNGFPGLEPAGIDLISKM 232
L ++ G KP C L L P + P+ +++IS +
Sbjct: 234 VLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-----GTHYYKAPELLL 156
R + D+K N+L+ DG + FG A L S GT + APE++L
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSG 180
G VD+W C+ M++G
Sbjct: 265 G-RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FG AK L A + E AE G K A E +L +
Sbjct: 139 RLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 198 -YTHQSDVWSYGVTVWELMT 216
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FG AK L A + E AE G K A E +L +
Sbjct: 137 RLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 196 -YTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FG AK L A + E AE G K A E +L +
Sbjct: 139 RLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 198 -YTHQSDVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FG AK L A + E AE G K A E +L +
Sbjct: 141 RLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 200 -YTHQSDVWSYGVTVWELMT 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 65/167 (38%), Gaps = 10/167 (5%)
Query: 16 IREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVN-DLAYLLKYPKDSMNGYSTKNFN 74
+ E S + E N +++RL+ V SQG + E DL L+ + M
Sbjct: 70 LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV--LA 127
Query: 75 SYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLY 134
SL + E +++ RDL N +V D TVK+ FG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF-TVKIGDFGMTRDIX 183
Query: 135 AYKGESSAEVGTH--YYKAPELLLGLLEYSTAVDIWPVGCIFGEMVS 179
G + +PE L + ++T D+W G + E+ +
Sbjct: 184 ETDXXRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FG AK L A + E AE G K A E +L +
Sbjct: 139 RLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 198 -YTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEVGTHYYK--APELLLGLL 159
R + RDL N+LV + VK+ FG AK L A + E AE G K A E +L +
Sbjct: 144 RLVHRDLAARNVLVKTP-QHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
Y+ D+W G E+++
Sbjct: 203 -YTHQSDVWSYGVTVWELMT 221
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGES--SAEVGTHYYKAPELLLGLL 159
+ I RD+K NIL+D + + V V FGLAK L YK A G + APE L
Sbjct: 154 KIIHRDVKAANILLDEEFEAV-VGDFGLAK-LMDYKDXHVXXAVRGXIGHIAPE-YLSTG 210
Query: 160 EYSTAVDIWPVGCIFGEMVSGKPLF 184
+ S D++ G + E+++G+ F
Sbjct: 211 KSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA--YKGESSAEVGTHYYKAPELLLGLL 159
+++ R+L N +V D TVK+ FG+ + +Y Y + + + APE L +
Sbjct: 150 KFVHRNLAARNCMVAHDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV 208
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
++T+ D+W G + E+ S
Sbjct: 209 -FTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYA--YKGESSAEVGTHYYKAPELLLGLL 159
+++ R+L N +V D TVK+ FG+ + +Y Y + + + APE L +
Sbjct: 151 KFVHRNLAARNCMVAHDF-TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV 209
Query: 160 EYSTAVDIWPVGCIFGEMVS 179
++T+ D+W G + E+ S
Sbjct: 210 -FTTSSDMWSFGVVLWEITS 228
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-----GTHYYKAPELLL 156
R + D+K N+L+ DG + FG A L S GT + APE+++
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSG 180
G VDIW C+ M++G
Sbjct: 244 G-KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-----GTHYYKAPELLL 156
R + D+K N+L+ DG + FG A L S GT + APE+++
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSG 180
G VDIW C+ M++G
Sbjct: 230 G-KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAYKGESSAEV-----GTHYYKAPELLL 156
R + D+K N+L+ DG + FG A L S GT + APE+++
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSG 180
G VDIW C+ M++G
Sbjct: 246 G-KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 102 RYIRRDLKPVNILVDLDGKTVKVAGFGLAKSLYAY---KGESSAEV--GTHYYKAPELLL 156
R + D+K N+L+ DG + FG A L K + + GT + APE++L
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 157 GLLEYSTAVDIWPVGCIFGEMVSG 180
G VD+W C+ M++G
Sbjct: 246 G-RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 37/172 (21%)
Query: 18 EVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL---AYLLKYPK--DSMNGYSTKN 72
E++ L + H NII+++ + + V E + L A++ ++P+ + + Y +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 73 FNSYSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDLDGKTVKVAGFGLA-- 130
S +L +++ I RD+K NI++ D T+K+ FG A
Sbjct: 139 LVSA---VGYLRLKDI---------------IHRDIKDENIVIAEDF-TIKLIDFGSAAY 179
Query: 131 ----KSLYAYKGESSAEVGTHYYKAPELLLGLLEYSTAVDIWPVGCIFGEMV 178
K Y + GT Y APE+L+G +++W +G +V
Sbjct: 180 LERGKLFYTF-------CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2HA8|A Chain A, Methyltransferase Domain Of Human Tar (Hiv-1) Rna Binding
Protein 1
pdb|2HA8|B Chain B, Methyltransferase Domain Of Human Tar (Hiv-1) Rna Binding
Protein 1
Length = 184
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 6 NTMEGVPSSMIREVSCLMELNHPNIIRLMRVASQGIYLYPVFEYQVNDL 54
N EG+P+++I+++ +E+ IIR + V G L ++EY L
Sbjct: 130 NEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALL--IWEYTRQQL 176
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
pdb|1LL7|B Chain B, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 42 YLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTT 81
+ YP E Q ND LLK +++++ YS K+ N T
Sbjct: 135 WQYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLT 174
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution
pdb|1LL4|A Chain A, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|B Chain B, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|C Chain C, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|D Chain D, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
Length = 392
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 42 YLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTT 81
+ YP E Q ND LLK +++++ YS K+ N T
Sbjct: 135 WEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLT 174
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|B Chain B, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|C Chain C, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|D Chain D, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 42 YLYPVFEYQVNDLAYLLKYPKDSMNGYSTKNFNSYSLFTT 81
+ YP E Q ND LLK +++++ YS K+ N T
Sbjct: 135 WEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLT 174
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 72 NFNS--YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDL--DGKTVKVAGF 127
NF S +SL T LL ++ +I RD+KP N L+ L G V + F
Sbjct: 94 NFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 150
Query: 128 GLAK 131
GLAK
Sbjct: 151 GLAK 154
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 72 NFNS--YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDL--DGKTVKVAGF 127
NF S +SL T LL ++ +I RD+KP N L+ L G V + F
Sbjct: 96 NFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152
Query: 128 GLAK 131
GLAK
Sbjct: 153 GLAK 156
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 72 NFNS--YSLFTTFLLVEEFXXXXXXXXXXFGTRYIRRDLKPVNILVDL--DGKTVKVAGF 127
NF S +SL T LL ++ +I RD+KP N L+ L G V + F
Sbjct: 96 NFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152
Query: 128 GLAK 131
GLAK
Sbjct: 153 GLAK 156
>pdb|3D00|A Chain A, Crystal Structure Of A Tungsten Formylmethanofuran
Dehydrogenase Subunit E (Fmde)-Like Protein (Syn_00638)
From Syntrophus Aciditrophicus At 1.90 A Resolution
Length = 191
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 130 AKSLYAYKGESSAEVGT--HYYKAPELLLGLLEYSTAVDIWPVGCIFGEMVSGKPLFPGA 187
A+++ +Y E E T H Y AP +L+G AV P G ++ + + P A
Sbjct: 4 ARNILSYSYEEYVEKITAFHGYPAPGVLIGGFXVDLAVKNLPEGILYDAICETRTCLPDA 63
Query: 188 NSLIT 192
L+T
Sbjct: 64 VQLLT 68
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,676,711
Number of Sequences: 62578
Number of extensions: 316132
Number of successful extensions: 3167
Number of sequences better than 100.0: 970
Number of HSP's better than 100.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 1129
Number of HSP's gapped (non-prelim): 1239
length of query: 259
length of database: 14,973,337
effective HSP length: 97
effective length of query: 162
effective length of database: 8,903,271
effective search space: 1442329902
effective search space used: 1442329902
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)