Query 039163
Match_columns 551
No_of_seqs 365 out of 2319
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 11:26:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039163.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039163hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 1.3E-91 4.5E-96 756.2 50.2 495 40-543 3-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 2.1E-88 7.3E-93 729.7 47.9 485 43-541 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2.7E-83 9.2E-88 695.9 44.7 490 39-544 6-499 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 6.9E-77 2.4E-81 639.0 42.2 457 43-542 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 2.9E-74 9.8E-79 621.3 40.8 453 54-540 7-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 4.7E-70 1.6E-74 592.8 41.7 454 45-540 24-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 5.2E-69 1.8E-73 584.8 45.6 460 42-541 19-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 1.2E-68 4.1E-73 582.2 43.6 451 56-541 33-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 6.5E-69 2.2E-73 582.1 41.3 465 40-548 5-486 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 8.2E-66 2.8E-70 553.0 36.9 435 55-540 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 9.2E-41 3.2E-45 364.8 31.7 219 40-272 30-259 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 6.5E-35 2.2E-39 317.1 32.4 197 79-280 53-260 (524)
13 3pm9_A Putative oxidoreductase 100.0 1.5E-33 5E-38 302.4 30.3 204 79-284 43-253 (476)
14 4feh_A Oxidoreductase DPRE1; a 100.0 6.1E-32 2.1E-36 289.9 34.3 178 79-261 35-217 (481)
15 4bby_A Alkyldihydroxyacetoneph 100.0 7.1E-33 2.4E-37 308.8 22.8 202 80-282 198-408 (658)
16 2vfr_A Xylitol oxidase, aldito 100.0 2.9E-30 9.8E-35 274.1 32.7 173 79-262 12-187 (422)
17 2uuu_A Alkyldihydroxyacetoneph 100.0 2.9E-31 9.8E-36 290.8 21.4 199 84-283 134-339 (584)
18 1wvf_A 4-cresol dehydrogenase 100.0 8.5E-30 2.9E-34 277.2 23.6 198 85-286 54-268 (520)
19 2i0k_A Oxidoreductase; MIX alp 100.0 2E-29 7E-34 275.8 18.0 198 56-263 9-226 (561)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 3.8E-28 1.3E-32 266.1 24.6 201 84-286 67-300 (560)
21 3js8_A Cholesterol oxidase; ch 100.0 1.3E-28 4.6E-33 264.1 17.6 178 79-261 21-220 (540)
22 1f0x_A DLDH, D-lactate dehydro 100.0 1.9E-28 6.6E-33 266.7 13.7 195 84-283 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 1.7E-25 5.7E-30 227.3 14.2 163 84-260 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.3E-24 4.3E-29 223.0 14.9 165 84-260 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 2.4E-24 8.1E-29 220.2 13.3 160 84-258 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 5.8E-23 2E-27 210.1 18.1 164 85-260 12-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 7.9E-22 2.7E-26 194.9 11.0 151 87-259 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.8E-19 9.7E-24 171.7 11.3 118 145-268 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.1 6.2E-06 2.1E-10 82.2 9.3 155 87-258 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.4 0.00021 7.3E-09 71.0 7.4 154 87-257 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.0 0.00074 2.5E-08 71.5 6.4 152 90-257 179-345 (462)
32 1t3q_C Quinoline 2-oxidoreduct 95.9 0.016 5.3E-07 57.5 7.6 150 87-256 4-174 (288)
33 3nvz_B Xanthine dehydrogenase/ 95.8 0.02 6.9E-07 57.2 8.3 157 87-257 9-190 (305)
34 3hrd_C Nicotinate dehydrogenas 91.5 0.19 6.5E-06 49.8 5.3 75 88-167 3-82 (296)
35 1wvf_A 4-cresol dehydrogenase 86.1 0.75 2.6E-05 49.2 5.6 33 507-539 481-514 (520)
36 1rm6_B 4-hydroxybenzoyl-COA re 85.8 0.7 2.4E-05 46.2 4.9 74 87-168 5-84 (324)
37 4bby_A Alkyldihydroxyacetoneph 80.0 3.1 0.00011 45.8 7.6 29 506-534 625-654 (658)
38 3unc_A Xanthine dehydrogenase/ 68.2 3.9 0.00013 48.6 4.8 78 87-170 232-313 (1332)
39 1e8g_A Vanillyl-alcohol oxidas 62.2 7.4 0.00025 41.8 5.2 26 514-539 523-548 (560)
40 1f0x_A DLDH, D-lactate dehydro 56.9 5.8 0.0002 42.8 3.2 30 513-543 536-565 (571)
41 2uuu_A Alkyldihydroxyacetoneph 50.5 21 0.00073 38.4 6.4 25 510-534 555-580 (584)
42 2i0k_A Oxidoreductase; MIX alp 50.2 6.8 0.00023 42.2 2.4 22 514-535 533-554 (561)
43 3js8_A Cholesterol oxidase; ch 37.1 15 0.00052 39.1 2.6 23 513-535 511-533 (540)
44 1xty_A PTH, peptidyl-tRNA hydr 34.4 63 0.0021 26.9 5.5 42 79-122 48-90 (120)
45 1wn2_A Peptidyl-tRNA hydrolase 34.3 61 0.0021 27.0 5.4 42 79-122 49-91 (121)
46 3zyv_A AOH1; oxidoreductase, m 33.3 37 0.0013 40.4 5.3 76 90-171 242-321 (1335)
47 1rzw_A Protein AF2095(GR4); be 33.1 50 0.0017 27.7 4.6 42 79-122 42-84 (123)
48 1rlk_A Hypothetical protein TA 32.0 68 0.0023 26.5 5.3 42 79-122 45-87 (117)
49 2zv3_A PTH, peptidyl-tRNA hydr 31.5 63 0.0022 26.6 5.0 42 79-122 43-85 (115)
50 3p04_A Uncharacterized BCR; SE 28.7 41 0.0014 26.4 3.1 34 89-144 7-40 (87)
51 1q7s_A BIT1, protein CGI-147; 25.6 1.1E+02 0.0037 25.3 5.4 41 79-121 45-86 (117)
52 2lnd_A De novo designed protei 22.6 89 0.0031 23.9 3.8 34 89-122 29-62 (112)
53 2kxh_B Peptide of FAR upstream 20.0 62 0.0021 19.9 2.0 20 511-530 9-28 (31)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=1.3e-91 Score=756.18 Aligned_cols=495 Identities=55% Similarity=0.998 Sum_probs=430.7
Q ss_pred chhhHHHhhhc--CCC-CCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEE
Q 039163 40 NENLFLDCLRS--DNS-SISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRV 116 (551)
Q Consensus 40 ~~~~~~~cl~~--~~~-~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~ 116 (551)
+.++|++||.. ..+ ++++.|++|+|+.|++++.+|.+|.||+......|.+||+|+|++||+++|++|+++++||++
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 56789999943 334 889999999999999998889999999998889999999999999999999999999999999
Q ss_pred EcCCCCCCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCC
Q 039163 117 RSGGHDFEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGG 196 (551)
Q Consensus 117 ~ggGh~~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg 196 (551)
||||||+.+.+.....++++|||++||+|++|+++++|+||+|+++++|+++|.++|+++++++|.|++|||||+++|||
T Consensus 83 rggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg 162 (518)
T 3vte_A 83 RSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGG 162 (518)
T ss_dssp ESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCC
T ss_pred ECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCC
Confidence 99999998877433235999999999999999999999999999999999999999878999999999999999999999
Q ss_pred CCCcccccCchhhheeeEEEEecCcceeeccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecch-hhH
Q 039163 197 YGIMLRKFGLAADNIVDAHLIDAHGRLLDRKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLE-QNA 275 (551)
Q Consensus 197 ~g~~~~~~G~~~D~v~~~~vV~a~G~iv~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~-~~~ 275 (551)
+|+++++||+.+|+|+++|||++||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..|.+.+..+ +++
T Consensus 163 ~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 242 (518)
T 3vte_A 163 YGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGL 242 (518)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHH
T ss_pred CccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHH
Confidence 9999999999999999999999999999754568999999999855899999999999999999888888887654 567
Q ss_pred HHHHHHHHHHHhhhcccceEEEEEEec---------CCceEEEEEEEeeCCccCchhhhhhhcccCCCCcCcccccChHH
Q 039163 276 TKIVHKWQYVANNLHEDLVIEVGLIKM---------NSSMLAAFSSLFLGGVDRLLPLMQESFPELGLRKDDCTEMSWIE 346 (551)
Q Consensus 276 ~~~~~~~~~~~~~~p~~l~~~~~~~~~---------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~ 346 (551)
.+++.+||++.+++|+++++.+.+... ...+.+.+.++|+|+.+++.+.|.+.|++++....++.+++|++
T Consensus 243 ~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~ 322 (518)
T 3vte_A 243 VKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWID 322 (518)
T ss_dssp HHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHH
T ss_pred HHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhh
Confidence 899999999999999999998887641 12356788899999999999988888888887777889999999
Q ss_pred HHHhhccCCCC-Cc---hhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHHHhhcCCceEEEEEEecC
Q 039163 347 SVHNLAGFDKG-QS---LDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYG 422 (551)
Q Consensus 347 ~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~~~i~~~~~G 422 (551)
.+.++..++.+ .+ ++.++++.. ....+||.||.|+.+++++++++.+++.+.+.+...+.++++++|
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~G 393 (518)
T 3vte_A 323 TTIFYSGVVNFNTANFKKEILLDRSA---------GKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYG 393 (518)
T ss_dssp HHHHTSSSCCC-----CGGGGGCTTC---------SCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECC
T ss_pred hhhhhhcCCccCCccchhhhhccCCc---------CcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecC
Confidence 99888765543 33 445555432 234567889999998999999999999887744335789999999
Q ss_pred CcCCCCCCCCCCCCCCCCceEEEEEEeecCCCccchHHHHHHHHHHHhhcccccCCCCCcccccCCCCcC-CCCCCCCch
Q 039163 423 GKMSEISESETPFPHRAGNLYKIFYGVSWGGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIG-INNPGYTSI 501 (551)
Q Consensus 423 Gav~~v~~~~taf~~Rd~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~dl~-~~~~~~~~~ 501 (551)
|+|+++++++|||+||++++|.+++.+.|.++++++++++|++++++.|.||.+..++++|+||+|.|++ .+..+++++
T Consensus 394 Ga~~~v~~~~TAf~hR~~~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~ 473 (518)
T 3vte_A 394 GIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNY 473 (518)
T ss_dssp GGGGTSCTTSSSCCCCTTCCEEEEEEEEECCTTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCH
T ss_pred ccccCCCCCCCcccccCcceEEEEEEEecCCcchhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccch
Confidence 9999999999999999955899999999988888899999999999999999765567899999999887 433355666
Q ss_pred hhhhhhhhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCCCCC
Q 039163 502 EQASIWGNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPPHTS 543 (551)
Q Consensus 502 ~~~~~~g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~ 543 (551)
+..+.|+++|||+||+||++||+||||+|+|+++|||+|.+.
T Consensus 474 ~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 474 TQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred hhhhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 667789999999999999999999999999999999999755
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=2.1e-88 Score=729.68 Aligned_cols=485 Identities=44% Similarity=0.801 Sum_probs=422.3
Q ss_pred hHHHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 039163 43 LFLDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHD 122 (551)
Q Consensus 43 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~ 122 (551)
+|++||.....+.++.|++|+|+.|++++.++.+|.||+....+.|.+||+|+|++||+++|++|+++++|+++||||||
T Consensus 1 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~ 80 (495)
T 3fw9_A 1 DLLSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHS 80 (495)
T ss_dssp CHHHHHHHTTCCCEEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCC
T ss_pred ChhHHHhhcCCCCCCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcC
Confidence 48999976543337899999999999998788999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCccc
Q 039163 123 FEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLR 202 (551)
Q Consensus 123 ~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~ 202 (551)
+.|.+...++++++|||++||+|++|+++++|+||+|+++++|+++|.++++++++++|.|++|||||+++|||+|++++
T Consensus 81 ~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~G~~~~ 160 (495)
T 3fw9_A 81 YEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSR 160 (495)
T ss_dssp TTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCCCTTHH
T ss_pred CCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCCccccc
Confidence 99887765445899999999999999999999999999999999999999777899999999999999999999999999
Q ss_pred ccCchhhheeeEEEEecCcceeeccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecch-hhHHHHHHH
Q 039163 203 KFGLAADNIVDAHLIDAHGRLLDRKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLE-QNATKIVHK 281 (551)
Q Consensus 203 ~~G~~~D~v~~~~vV~a~G~iv~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 281 (551)
+||+.+|+|++++||++||++++++.+++|||||+|||++|+|||||+++||++|.|+.+..+.+.++.+ +++.+++..
T Consensus 161 ~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~ 240 (495)
T 3fw9_A 161 KYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHK 240 (495)
T ss_dssp HHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHH
T ss_pred CCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHH
Confidence 9999999999999999999999855568999999999655899999999999999999888888887654 667899999
Q ss_pred HHHHHhhhcccceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhcccCCCCcCcccccChHHHHHhhccCCCCCchh
Q 039163 282 WQYVANNLHEDLVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFPELGLRKDDCTEMSWIESVHNLAGFDKGQSLD 361 (551)
Q Consensus 282 ~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (551)
|++++.++|+++++.+......+...+.+.++|+|+.+++.+.|.+.|+++++...++.+++|++.+.++.+.+. ++
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~ 317 (495)
T 3fw9_A 241 WQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLET---VS 317 (495)
T ss_dssp HHHHHHHSCTTEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSC---GG
T ss_pred HHHHHhcCChhHeEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccc---hh
Confidence 999999999999988775433345667888999999999888888878888877778899999998887764432 23
Q ss_pred hhhhcccccCCcccccC-CCCCccccccCcCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCcCCCCCCCCCCCCCCCC
Q 039163 362 LLLDRNARSNGLVVKST-TKSPFKAKADYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESETPFPHRAG 440 (551)
Q Consensus 362 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~~~i~~~~~GGav~~v~~~~taf~~Rd~ 440 (551)
.++++.. . ++.+||.||.|+++++++++++.+++.+.+.+. +.++++++||+++++++++|||+||++
T Consensus 318 ~l~~~~~---------~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~--~~~~~~~~GGa~~~v~~~~TAf~hR~~ 386 (495)
T 3fw9_A 318 QLNNRFL---------KFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN--GFIALNGFGGQMSKISSDFTPFPHRSG 386 (495)
T ss_dssp GGGCTTS---------CSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT--EEEEEEECCGGGGTSCTTTSSCCCCTT
T ss_pred hhcCCCC---------CccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC--cEEEecccCCccccCCCCCCCccccCc
Confidence 3444322 1 346788999999999999999999999887654 679999999999999999999999986
Q ss_pred ceEEEEEEeecCCC--ccchHHHHHHHHHHHhhcccccCCCCCcccccCCCCcCCCCC-----CCCchhhhhhhhhhhhh
Q 039163 441 NLYKIFYGVSWGGD--GISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGINNP-----GYTSIEQASIWGNKYFK 513 (551)
Q Consensus 441 ~~~~i~~~~~W~~~--~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~dl~~~~~-----~~~~~~~~~~~g~~yyg 513 (551)
.+|.+++.+.|.++ ++++++++|++++++.+.||....++++|+||+|.|++.++. ++++++..+.|+++|||
T Consensus 387 ~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg 466 (495)
T 3fw9_A 387 TRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFL 466 (495)
T ss_dssp CCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHG
T ss_pred cceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhH
Confidence 68999999999864 677889999999999999997655678999999998863221 12445556789999999
Q ss_pred ccHHHHHHhHhhcCCCCCCCCCCCCCCC
Q 039163 514 NNFKRLVHVKTMADPHNFFRNEQSIPPH 541 (551)
Q Consensus 514 ~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 541 (551)
+||+||++||++|||+|+|+++|||+|.
T Consensus 467 ~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 467 SNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred hHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2.7e-83 Score=695.94 Aligned_cols=490 Identities=47% Similarity=0.890 Sum_probs=412.6
Q ss_pred CchhhHHHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEc
Q 039163 39 HNENLFLDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRS 118 (551)
Q Consensus 39 ~~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~g 118 (551)
+..++|++||..... ...|++|+++.|.+.+.+|.+|.||+....++|.+||+|+|++||+++|++|+++++||++||
T Consensus 6 ~~~~~f~~~L~~~~~--~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~ 83 (500)
T 3tsh_A 6 AAKEDFLGCLVKEIP--PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRS 83 (500)
T ss_dssp ---CHHHHHHHHHSC--GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEES
T ss_pred ccHHHHHHHHHhhCC--CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEc
Confidence 355789999976543 567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccc--CCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCC
Q 039163 119 GGHDFEGLSYVS--HVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGG 196 (551)
Q Consensus 119 gGh~~~g~~~~~--~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg 196 (551)
|||++.|.+... .+++++|||++||+|++|+++++++||+|++|+||+++|.++|+++.+++|.|++|||||+++|||
T Consensus 84 gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg 163 (500)
T 3tsh_A 84 GGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGG 163 (500)
T ss_dssp SCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCC
T ss_pred CCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCcccccc
Confidence 999998876532 235999999999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCcccccCchhhheeeEEEEecCcceeeccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecchhhHH
Q 039163 197 YGIMLRKFGLAADNIVDAHLIDAHGRLLDRKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNAT 276 (551)
Q Consensus 197 ~g~~~~~~G~~~D~v~~~~vV~a~G~iv~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~ 276 (551)
+|+++++||+++|||+++|||++||+|++.+++++|||||+|||++|+|||||+++||++|.|+.+..+.+.+...+.+.
T Consensus 164 ~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~ 243 (500)
T 3tsh_A 164 FGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAV 243 (500)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHH
T ss_pred CCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHH
Confidence 99999999999999999999999999998666789999999988878999999999999999998877777777666778
Q ss_pred HHHHHHHHHHhhhcccceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhcccCCCCcCcccccChHHHHHhhccCCC
Q 039163 277 KIVHKWQYVANNLHEDLVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFPELGLRKDDCTEMSWIESVHNLAGFDK 356 (551)
Q Consensus 277 ~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 356 (551)
+++.+|+.+.+++|+++.+.+.... +...+.++|+|+.+++.+.+.+.+++++.....+.+++|.+.+.+......
T Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 319 (500)
T 3tsh_A 244 DIINKWQVVAPQLPADLMIRIIAQG----PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHR 319 (500)
T ss_dssp HHHHHHHHHGGGSCTTEEEEEEESS----SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCS
T ss_pred HHHHHHHHhhhccChhhEEEEEecC----CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhccc
Confidence 8999999999999999877665432 355677899999888888777777888777777788899887765443222
Q ss_pred CCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCcCCCCCCCCCCCC
Q 039163 357 GQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDKFYEEEGETAFIVLVPYGGKMSEISESETPFP 436 (551)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~~~i~~~~~GGav~~v~~~~taf~ 436 (551)
....+.+.++.. ....+.+.++.++.++++++.++.+++.+...+. ...+.++++||++.++++++|+|+
T Consensus 320 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gga~~~~~~~ata~~ 389 (500)
T 3tsh_A 320 DALEDDLLNRQN---------SFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG-AGIMIFDPYGATISATPESATPFP 389 (500)
T ss_dssp SCHHHHHHCCCC---------CCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT-CCEEEEEECCHHHHHSCTTSSSCC
T ss_pred cccccccccccc---------cccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC-ceEEEEcccCccccCCCCccCcCc
Confidence 222223333221 2234455677778888898888888877665554 345678899999999999999999
Q ss_pred CCCCceEEEEEEeecCCCccchHHHHHHHHHHHhhcccccCCCCCcccccCCCCcCCCCC--CCCchhhhhhhhhhhhhc
Q 039163 437 HRAGNLYKIFYGVSWGGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGINNP--GYTSIEQASIWGNKYFKN 514 (551)
Q Consensus 437 ~Rd~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~dl~~~~~--~~~~~~~~~~~g~~yyg~ 514 (551)
||++.+|.+++...|.+++++++.++|++++++.+.++....++++|+||+|.+++.+.. ....+.....|++.|||+
T Consensus 390 ~R~~~l~~i~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 390 HRKGVLFNIQYVNYWFAPGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp CCTTCCEEEEEEEEECSTTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred ccCCcEEEEEEEEecCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 999777899999999999999999999999999999997666678999999998864321 011234456899999999
Q ss_pred cHHHHHHhHhhcCCCCCCCCCCCCCCCCCC
Q 039163 515 NFKRLVHVKTMADPHNFFRNEQSIPPHTSR 544 (551)
Q Consensus 515 n~~RL~~IK~kyDP~nvF~~~qsI~~~~~~ 544 (551)
||+||++||+||||+|+|+++|||||..+|
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~~ 499 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLIKK 499 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCCC-
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCCCC
Confidence 999999999999999999999999998766
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=6.9e-77 Score=638.99 Aligned_cols=457 Identities=25% Similarity=0.451 Sum_probs=376.4
Q ss_pred hHHHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 039163 43 LFLDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHD 122 (551)
Q Consensus 43 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~ 122 (551)
++.+||... ...|++|+|+.|+.++. +|+......|.+||+|+|++||+++|++|+++++|+.+||||||
T Consensus 2 ~l~~cl~~~----~~~v~~p~~~~y~~~~~------~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~ 71 (473)
T 3rja_A 2 AIEACLSAA----GVPIDIPGTADYERDVE------PFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHS 71 (473)
T ss_dssp HHHHHHHHT----TCCBCCTTSHHHHHHTC------CSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCC
T ss_pred hHHHHHHhC----CCcEECCCCCchHHHHH------HhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 578999876 34689999999998753 35555567999999999999999999999999999999999999
Q ss_pred CCCCccccCCCEEEEEeeCCcceE-EcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcc
Q 039163 123 FEGLSYVSHVPFVVIDLINLCKIS-VDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIML 201 (551)
Q Consensus 123 ~~g~~~~~~~~gvvidl~~l~~i~-id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~ 201 (551)
+.+.+....+++++|||++||+|. +|+++++|+||+|++|++|+++|.++| ++.++.|.|+++||||+++|||+|+.+
T Consensus 72 ~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~G~~~ 150 (473)
T 3rja_A 72 YASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGFGFSS 150 (473)
T ss_dssp TTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCCCTTH
T ss_pred CCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCCCccc
Confidence 986554333358999999999997 999999999999999999999999997 478899999999999999999999999
Q ss_pred cccCchhhheeeEEEEecCcceee-ccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecch--hhHHHH
Q 039163 202 RKFGLAADNIVDAHLIDAHGRLLD-RKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLE--QNATKI 278 (551)
Q Consensus 202 ~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~ 278 (551)
++||+.+|+|+++|||++||++++ +..+++|||||+|||+ |+|||||+++||++|.|+.+..+.+.+++. +++.++
T Consensus 151 ~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~ 229 (473)
T 3rja_A 151 HMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKG 229 (473)
T ss_dssp HHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHH
T ss_pred ccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHH
Confidence 999999999999999999999997 5667899999999997 899999999999999998887888777764 347789
Q ss_pred HHHHHHHHh-hhcccceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhcccCC-CCcCccc-ccChHHHHHhhccCC
Q 039163 279 VHKWQYVAN-NLHEDLVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFPELG-LRKDDCT-EMSWIESVHNLAGFD 355 (551)
Q Consensus 279 ~~~~~~~~~-~~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~~ 355 (551)
+++|+++.. ++|+++++.+.+. ... .+.+.++|+|+.+++.++|++++...+ +...++. +++|++.+.++....
T Consensus 230 ~~~~~~~~~~~~p~~l~~~~~~~-~~~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 306 (473)
T 3rja_A 230 IEAVEDYARWVAPREVNFRIGDY-GAG--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFD 306 (473)
T ss_dssp HHHHHHHHHHTCCTTEEEEEEES-SSS--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSSS
T ss_pred HHHHHHHhhhCCChhHEEEEEEc-CCC--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcCC
Confidence 999999988 8999999888775 211 266778999999998888887543333 3456778 899999876654211
Q ss_pred CCCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHHHhhc-CC---ceEEEEEEecCC---cCCCC
Q 039163 356 KGQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDKFYEE-EG---ETAFIVLVPYGG---KMSEI 428 (551)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~-~~---~~~~i~~~~~GG---av~~v 428 (551)
+.+ ... . .....++.||.+.. ++++++++.+++.+.+. +. ..+.++++++|| +++++
T Consensus 307 ---~~~----~~~------~--~~~~~~~~ks~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v 370 (473)
T 3rja_A 307 ---HVD----FIT------P--QPVENFYAKSLTLK-SIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKV 370 (473)
T ss_dssp ---CCC----CSS------C--CCCBEEEEEEEEES-CCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGS
T ss_pred ---Ccc----ccc------C--CCCCcceEeccccC-CCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCC
Confidence 111 100 0 00234667888765 69999999999988653 21 345688999998 67889
Q ss_pred CCCCCCCCCCCCceEEEEEEeecCC-CccchHHHHHHHHHHHhhcccccCCCCCcccccCCCCcCCCCCCCCchhhhhhh
Q 039163 429 SESETPFPHRAGNLYKIFYGVSWGG-DGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGINNPGYTSIEQASIW 507 (551)
Q Consensus 429 ~~~~taf~~Rd~~~~~i~~~~~W~~-~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~dl~~~~~~~~~~~~~~~~ 507 (551)
++++|||+||+ ..|.+++...|.+ ++.+++..+|+++.++.+.+.....+.++|+||+|.+++ .+.|
T Consensus 371 ~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~-----------~~~~ 438 (473)
T 3rja_A 371 TNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD-----------RDYA 438 (473)
T ss_dssp CTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC-----------HHHH
T ss_pred CCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc-----------chhH
Confidence 99999999999 6899999999964 555666778888877777554332345799999998865 2479
Q ss_pred hhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCCCC
Q 039163 508 GNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPPHT 542 (551)
Q Consensus 508 g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~ 542 (551)
++.|||+||+||++||+||||+|+|+++|||+|++
T Consensus 439 ~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 439 TKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 99999999999999999999999999999999863
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=2.9e-74 Score=621.28 Aligned_cols=453 Identities=23% Similarity=0.379 Sum_probs=358.7
Q ss_pred CCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCC
Q 039163 54 SISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVP 133 (551)
Q Consensus 54 ~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~ 133 (551)
.+.+.|++|+|+.|++++. .+|.|| ...|.+||+|+|++||+++|++|+++++||++||||||+.+.+...+ +
T Consensus 7 s~~~~~~~p~~~~y~~~~~--~~n~~~----~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~-~ 79 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSH--SDNHRF----VVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR-R 79 (501)
T ss_dssp --CCEEEETTSTTHHHHTC--CSCTTS----CCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC-C
T ss_pred cCCCceECCCCcchHHHHH--HHhhcc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC-C
Confidence 3578899999999999864 445555 56999999999999999999999999999999999999988776432 4
Q ss_pred EEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheee
Q 039163 134 FVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVD 213 (551)
Q Consensus 134 gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~ 213 (551)
+++|||++||+|++|+++++|+||+|++|++|+++|.+.. |+.+++|.|++|||||+++|||+|+++++||+++|+|++
T Consensus 80 gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~-Gl~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~ 158 (501)
T 3pop_A 80 DLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRW-NAALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHA 158 (501)
T ss_dssp SEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHH-SBCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEE
T ss_pred EEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhc-CeEeCCCCCCCceEeeccccCCCcccccccccHHHhEEE
Confidence 8999999999999999999999999999999999997531 478899999999999999999999999999999999999
Q ss_pred EEEEe--cCcc--eeec----cCCCchhhhhhhcccCCCceEEEEEEEEE----------EecC-ceEEEEEEeecch--
Q 039163 214 AHLID--AHGR--LLDR----KSMGEDLFWAIRGGGGASFGVVVAWKLRL----------VTVP-STVTRFTITRTLE-- 272 (551)
Q Consensus 214 ~~vV~--a~G~--iv~~----~~~~~dLf~a~rG~g~g~fGiVt~~~~~~----------~p~~-~~~~~~~~~~~~~-- 272 (551)
+|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+.+
T Consensus 159 ~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~~~ 238 (501)
T 3pop_A 159 VEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWAMI 238 (501)
T ss_dssp EEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGGGC
T ss_pred EEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchhhc
Confidence 99999 8999 4542 35689999999998668999999999998 6654 4566777777643
Q ss_pred --hhHHHHHHHHHHHHh--hhccc----ceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhccc------CCCCcCc
Q 039163 273 --QNATKIVHKWQYVAN--NLHED----LVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFPE------LGLRKDD 338 (551)
Q Consensus 273 --~~~~~~~~~~~~~~~--~~p~~----l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~------l~~~~~~ 338 (551)
+...+++..|+++.. ..|++ +...+.+.... .-.+.+..+|.|+.+++.+++++++.. +.+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p~~~- 316 (501)
T 3pop_A 239 DETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVS-SGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVGIPR- 316 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECGG-GCEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCCEEE-
T ss_pred CHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCCC-CCeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCccce-
Confidence 234577888888765 34544 33333333211 113455677899888877777664432 233333
Q ss_pred ccccChHHHHHhhccCCCCCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHHHhhc-CCceEEEE
Q 039163 339 CTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDKFYEE-EGETAFIV 417 (551)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~-~~~~~~i~ 417 (551)
+.+++|.+...+.. .+.+.+ ....+++.||.|+.+++++++++.+++.+.+. +.+.+.++
T Consensus 317 ~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~ 377 (501)
T 3pop_A 317 GGVMSWLTGTRYMS-QADCGD------------------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVM 377 (501)
T ss_dssp EEEEEHHHHHHHTC-BCSCGG------------------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEE
T ss_pred eEEeCHHHHHhhhc-CCCCCc------------------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 78899998765432 111000 01124677899998889999999999988763 33457889
Q ss_pred EEecCCcCCCCCCCCCCCCCCCCceEEEEEEeecCCCccchHHHHHHHHHHHhhcccc------cCCCCCcccccCCCCc
Q 039163 418 LVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWGGDGISQRHIDWIRSLYSYMTPYV------SKNPREAYVNYRDLDI 491 (551)
Q Consensus 418 ~~~~GGav~~v~~~~taf~~Rd~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~------~~~~~~~Y~Nyad~dl 491 (551)
++++||+++++++++|||+||+ ..|++++...|.+++.++++.+|++++++.+.++. +..+.++|+||+|.|+
T Consensus 378 ~~~~GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl 456 (501)
T 3pop_A 378 FNSYGGEINRRGPSDAAVPQRD-SVVKSSWFSAWQDAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADL 456 (501)
T ss_dssp EEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGG
T ss_pred EEecCcccccCCCCCCCccCcC-ccEEEEEEEEeCCcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccc
Confidence 9999999999999999999999 68999999999988888899999999999997653 1235689999999987
Q ss_pred CCCCCCCCchhhhhhhhhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCC
Q 039163 492 GINNPGYTSIEQASIWGNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPP 540 (551)
Q Consensus 492 ~~~~~~~~~~~~~~~~g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 540 (551)
+.+. .+++ ...|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 457 ~~~~-~~~~---~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 457 LDPA-RNRS---GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp GCTT-TCCS---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cccc-cccc---cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 6211 1111 2249999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=4.7e-70 Score=592.78 Aligned_cols=454 Identities=27% Similarity=0.453 Sum_probs=350.1
Q ss_pred HHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC
Q 039163 45 LDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFE 124 (551)
Q Consensus 45 ~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~ 124 (551)
..||... ...|++|+|+.|+.++ ...+|.||. ..|.+||+|+|++||+++|++|+++++||.+||||||+.
T Consensus 24 ~~~l~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~ 94 (523)
T 2wdx_A 24 ERCLPPA----GPVKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFE 94 (523)
T ss_dssp --CCCCC----CCEEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSS
T ss_pred hhhcccC----CCeEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCC
Confidence 4888664 4688999999999986 235677774 489999999999999999999999999999999999998
Q ss_pred CCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHH-hcCCcccCCCCCCcccccccccCCCCCCcccc
Q 039163 125 GLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAE-KSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRK 203 (551)
Q Consensus 125 g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~ 203 (551)
+.+...+ ++++|||++||+|++|+++++|+||+|++|.+|+++|.+ +| +.+++|.|++|||||+++|||+|+++++
T Consensus 95 g~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~ 171 (523)
T 2wdx_A 95 DFVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYGPLSRQ 171 (523)
T ss_dssp SSSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCCTTHHH
T ss_pred CCccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCCccccc
Confidence 8765432 489999999999999999999999999999999999985 75 6888999999999999999999999999
Q ss_pred cCchhhheeeEEEEecC--cceee---ccC-CCch--hhhhhhcccCCCceEEEEEEEEE-----------EecCc-eEE
Q 039163 204 FGLAADNIVDAHLIDAH--GRLLD---RKS-MGED--LFWAIRGGGGASFGVVVAWKLRL-----------VTVPS-TVT 263 (551)
Q Consensus 204 ~G~~~D~v~~~~vV~a~--G~iv~---~~~-~~~d--Lf~a~rG~g~g~fGiVt~~~~~~-----------~p~~~-~~~ 263 (551)
||+++|+|+++|||++| |+++. +.. +++| ||||+|||++|+|||||+++||+ +|.|+ .+.
T Consensus 172 ~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~ 251 (523)
T 2wdx_A 172 FGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLL 251 (523)
T ss_dssp HCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEE
T ss_pred ccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEE
Confidence 99999999999999955 99742 222 4455 99999987668999999999999 99876 466
Q ss_pred EEEEeecch----hhHHHHHHHHHHHHhh--hccc----ceEEEEEEec-CC--ceEEEEEEEeeCCccCchhhhhhhcc
Q 039163 264 RFTITRTLE----QNATKIVHKWQYVANN--LHED----LVIEVGLIKM-NS--SMLAAFSSLFLGGVDRLLPLMQESFP 330 (551)
Q Consensus 264 ~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~-~~--~~~~~~~~~~~G~~~~~~~~l~~~~~ 330 (551)
.+.+.|+.+ +...+++++|+++... .|++ +...+.+... .+ .+.+.+..+|.|+.++..+.+++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 331 (523)
T 2wdx_A 252 TSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIE 331 (523)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHHH
T ss_pred EEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 777777643 2345778888887654 4655 3333333221 12 23456677889988777666665332
Q ss_pred c----CC-CCcCcccccChHHHHHhhccCCCCCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHH
Q 039163 331 E----LG-LRKDDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDK 405 (551)
Q Consensus 331 ~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~ 405 (551)
. ++ +...++.+++|.+....+ .. ...+++.++.++.+.++.+.++.+++.
T Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~~~~-------------~~------------~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (523)
T 2wdx_A 332 AVIDGVPPAEVPEPIEQRWLASTPGR-------------GG------------RGPASKTKAGYLRKRLTDRQIQAVYEN 386 (523)
T ss_dssp HHHTTCTTCBCCCCEEEETTSSCCCC-------------CS------------SCCEEEEEEEEESSCCCHHHHHHHHHH
T ss_pred HHHhhcCCCccccceeccHHHHHHhh-------------cC------------CCCceeeecccccCCCCHHHHHHHHHH
Confidence 1 22 223344455554421100 00 011345567777667888999999998
Q ss_pred Hhhc-CCceEEEEEEecCCcCCCCCCCCCCCCCCCCceEEEEEEeecCCCccchHHHHHHHHHHHhhc------ccccCC
Q 039163 406 FYEE-EGETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWGGDGISQRHIDWIRSLYSYMT------PYVSKN 478 (551)
Q Consensus 406 ~~~~-~~~~~~i~~~~~GGav~~v~~~~taf~~Rd~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~------~~~~~~ 478 (551)
+... +...+.+.++++||++++++.++|+|+||+ ..|++++...|.++++++.+.+|++++++.+. |+....
T Consensus 387 ~~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~ 465 (523)
T 2wdx_A 387 MTHMDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWANPGNEAKHLTWVRKLYADVYAETGGVPVPNDV 465 (523)
T ss_dssp HTCCTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESSGGGHHHHHHHHHHHHHHHTGGGTTSCCSCSS
T ss_pred HHhcCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCCCccHHHHHHHHHHHHHHHHhhhcCCCccCCC
Confidence 8653 224577889999999999999999999999 68999999999988888899999999999987 321111
Q ss_pred CCCcccccCCCCcCCCCCCCCchhhhhhhhhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCC
Q 039163 479 PREAYVNYRDLDIGINNPGYTSIEQASIWGNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPP 540 (551)
Q Consensus 479 ~~~~Y~Nyad~dl~~~~~~~~~~~~~~~~g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~ 540 (551)
..++|+||+|.+++.+. .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|
T Consensus 466 ~~g~Y~Ny~d~~~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 466 SDGAYINYPDSDLADPG-LNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp BCCCCTTSCCGGGGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred CCcceecCCcccccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 35799999999875210 11111 148999999999999999999999999999999986
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=5.2e-69 Score=584.79 Aligned_cols=460 Identities=25% Similarity=0.424 Sum_probs=349.0
Q ss_pred hhHHHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCC
Q 039163 42 NLFLDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGH 121 (551)
Q Consensus 42 ~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh 121 (551)
-+...|+... ...|++|+|+.|++++ ...+|.||. ..|.+||+|+|++||+++|++|+++++||.||||||
T Consensus 19 ~~~~~~~~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh 89 (521)
T 2ipi_A 19 FDGGACGART----ALVKVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGH 89 (521)
T ss_dssp --------------CCCEEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred ccccccccCC----CCeEECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 3455777654 4578999999999986 235577774 489999999999999999999999999999999999
Q ss_pred CCCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHH-HhcCCcccCCCCCCcccccccccCCCCCCc
Q 039163 122 DFEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIA-EKSKNLGFPGGVCPTVGVGGHFSGGGYGIM 200 (551)
Q Consensus 122 ~~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~ 200 (551)
++.+.+...+ ++++|||++||+|++|+++++|+||+|++|.+|+++|. ++| +.+++|.|++|||||+++|||+|++
T Consensus 90 ~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~ 166 (521)
T 2ipi_A 90 CFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGYGPL 166 (521)
T ss_dssp CTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCCCTT
T ss_pred CCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCCCcc
Confidence 9988654322 48999999999999999999999999999999999997 664 7888999999999999999999999
Q ss_pred ccccCchhhheeeEEEEecC--ccee--e-ccC-CCc--hhhhhhhcccCCCceEEEEEEEEE-----------EecCc-
Q 039163 201 LRKFGLAADNIVDAHLIDAH--GRLL--D-RKS-MGE--DLFWAIRGGGGASFGVVVAWKLRL-----------VTVPS- 260 (551)
Q Consensus 201 ~~~~G~~~D~v~~~~vV~a~--G~iv--~-~~~-~~~--dLf~a~rG~g~g~fGiVt~~~~~~-----------~p~~~- 260 (551)
+++||+++|+|+++|||++| |+++ + +.. +++ |||||+|||++|+|||||+++||+ +|.|+
T Consensus 167 s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~~ 246 (521)
T 2ipi_A 167 SRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAPT 246 (521)
T ss_dssp HHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCCS
T ss_pred ccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCCc
Confidence 99999999999999999977 9874 2 221 444 599999997668999999999999 98875
Q ss_pred eEEEEEEeecch----hhHHHHHHHHHHHHhh--hccc----ceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhcc
Q 039163 261 TVTRFTITRTLE----QNATKIVHKWQYVANN--LHED----LVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFP 330 (551)
Q Consensus 261 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~ 330 (551)
.+..+.+.|+.+ +...+++++|+++... .|++ +...+.+..... ..+.+..+|.|+.++..+++++.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~l~~~~~ 325 (521)
T 2ipi_A 247 STLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSRAA-GQILLDIQIDGGLDGAEALLNDFVA 325 (521)
T ss_dssp CEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECTTS-CEEEEEEEEETTSTTHHHHHHHHHH
T ss_pred eEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccCCC-CceEEEEEeccCHHHHHHHHHHHHH
Confidence 455666666542 2335778888887654 4554 344333332111 1344556788988776666655322
Q ss_pred ---c-CC-CCcCcccccChHHHHHhhccCCCCCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHH
Q 039163 331 ---E-LG-LRKDDCTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDK 405 (551)
Q Consensus 331 ---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~ 405 (551)
+ ++ +...++..++|.+........+ ....+++.++.++.++++.+.++.+++.
T Consensus 326 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~s~~~~~~~~~~~i~~~~~~ 383 (521)
T 2ipi_A 326 AVNEGTGVEPAVQRSTEPWLRATLANKFDT----------------------GGFDRTKSKGAYLRKPWTAAQAATLYRH 383 (521)
T ss_dssp HHTTTCSSCCEEEEEEECHHHHHTCCCCCC----------------------TTCCEEEEEEEEESSCCCHHHHHHHHHH
T ss_pred HHHhhcCCCccceeeecCHHHHHHhhcCCC----------------------CCCccceeeccccccCCCHHHHHHHHHH
Confidence 1 22 2334556778887543221100 0001344567777767899999999998
Q ss_pred HhhcCCceEEEEEEecCCcCCCCCCCCCCCCCCCCceEEEEEEeecCCCccchHHHHHHHHHHHhhccccc------CCC
Q 039163 406 FYEEEGETAFIVLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWGGDGISQRHIDWIRSLYSYMTPYVS------KNP 479 (551)
Q Consensus 406 ~~~~~~~~~~i~~~~~GGav~~v~~~~taf~~Rd~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~~------~~~ 479 (551)
+.+.+...+.+.++++||++++++.++|+|+||+ ..+.+++...|.++++++...+|++++++.+..... ...
T Consensus 384 ~~~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~ 462 (521)
T 2ipi_A 384 LSADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMDPAHDDANLAWIREIYREIFATTGGVPVPDDRT 462 (521)
T ss_dssp HHSCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESCGGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSB
T ss_pred HHhCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCCCCchHHHHHHHHHHHHHHHhhhcCCCcccCCC
Confidence 8775555678899999999999999999999999 689999999999888888899999999999873211 113
Q ss_pred CCcccccCCCCcCCCCCCCCchhhhhhhhhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCCC
Q 039163 480 REAYVNYRDLDIGINNPGYTSIEQASIWGNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPPH 541 (551)
Q Consensus 480 ~~~Y~Nyad~dl~~~~~~~~~~~~~~~~g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 541 (551)
.++|+||+|.+++... .+++ ...|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 463 ~g~Y~Ny~d~~~~~~~-~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 463 EGTFINYPDVDLVDER-WNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CCCCTTSCCGGGGCTT-TSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred CceEeCCCCccccccc-cccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 5799999999875210 0111 11499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.2e-68 Score=582.16 Aligned_cols=451 Identities=27% Similarity=0.451 Sum_probs=347.7
Q ss_pred ceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEE
Q 039163 56 SQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFV 135 (551)
Q Consensus 56 ~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gv 135 (551)
...|++|+|+.|+.++. .+|.|| ...|.+||+|+|++||+++|++|+++++||++|||||++.+.+.... +++
T Consensus 33 ~~~v~~p~~~~Y~~~~~--~~n~~~----~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~gv 105 (530)
T 2y3s_A 33 HIDSVAPGDIRYEDLRR--GENLRF----VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VRV 105 (530)
T ss_dssp -CCEECTTSTTHHHHTC--CSCTTC----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CCE
T ss_pred CceEECCCCccHHHHHh--Hhhhhc----cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-CeE
Confidence 45689999999999865 446666 45899999999999999999999999999999999999988665332 489
Q ss_pred EEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHH-hcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeE
Q 039163 136 VIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAE-KSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDA 214 (551)
Q Consensus 136 vidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~-~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~ 214 (551)
+|||++||+|++|+++++|+||+|++|.+|+++|.+ +| +++++|.|++|||||+++|||+|+++++||+++|+|+++
T Consensus 106 vIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 106 VMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 999999999999999999999999999999999985 65 688899999999999999999999999999999999999
Q ss_pred EEEe--cCccee--e-ccC-CCc--hhhhhhhcccCCCceEEEEEEEEE------------EecCc-eEEEEEEeecch-
Q 039163 215 HLID--AHGRLL--D-RKS-MGE--DLFWAIRGGGGASFGVVVAWKLRL------------VTVPS-TVTRFTITRTLE- 272 (551)
Q Consensus 215 ~vV~--a~G~iv--~-~~~-~~~--dLf~a~rG~g~g~fGiVt~~~~~~------------~p~~~-~~~~~~~~~~~~- 272 (551)
|||+ ++|+++ + +.. +++ |||||+||||+|+|||||+++||+ +|.|+ .+..+.+.|+.+
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 9999 559974 2 322 445 599999998668999999999999 88875 466666666542
Q ss_pred ---hhHHHHHHHHHHHHhh--hccc----ceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhcc---c-CC-CCcCc
Q 039163 273 ---QNATKIVHKWQYVANN--LHED----LVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFP---E-LG-LRKDD 338 (551)
Q Consensus 273 ---~~~~~~~~~~~~~~~~--~p~~----l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~---~-l~-~~~~~ 338 (551)
+...++++.|+++... .|++ +...+.+... ....+.+..+|.|+.++..+++++++. + ++ +....
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~ 342 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-QSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSD 342 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-GGSEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEE
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-CCCcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccce
Confidence 2345778888887654 4554 3333333321 112344556788988777666655322 1 23 23345
Q ss_pred ccccChHHHHHhhccCCCCCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHHHhhcC--CceEEE
Q 039163 339 CTEMSWIESVHNLAGFDKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDKFYEEE--GETAFI 416 (551)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~~~~--~~~~~i 416 (551)
+..++|.+........+ .. ....+++.++.++.++++++.++.+++.+.+.+ ...+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~----------~~----------~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 402 (530)
T 2y3s_A 343 TRRLPWLHSTRWPGIAG----------DG----------DMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVV 402 (530)
T ss_dssp EEEEEHHHHTTCHHHHC----------CC----------CCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEE
T ss_pred eeeccHHHHHHhhcCCC----------CC----------cccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEE
Confidence 56778887543221000 00 001235567778776789899999999887632 234678
Q ss_pred EEEecCCcCCCCCCCCCCCCCCCCceEEEEEEeecCCCccchHHHHHHHHHHHhhcccc------cCCCCCcccccCCCC
Q 039163 417 VLVPYGGKMSEISESETPFPHRAGNLYKIFYGVSWGGDGISQRHIDWIRSLYSYMTPYV------SKNPREAYVNYRDLD 490 (551)
Q Consensus 417 ~~~~~GGav~~v~~~~taf~~Rd~~~~~i~~~~~W~~~~~~~~~~~w~~~~~~~l~~~~------~~~~~~~Y~Nyad~d 490 (551)
.++++||++++++.++|+|+||+ ..|++++...|.++++++...+|++++++.+.+.. .....++|+||+|.+
T Consensus 403 ~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~ 481 (530)
T 2y3s_A 403 ALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVD 481 (530)
T ss_dssp EEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECCTTCHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGG
T ss_pred EEEecCCccccCCCCcCcccccc-cceeEEEEEecCCCcchHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCcc
Confidence 89999999999999999999999 68999999999988888899999999999887321 111357999999998
Q ss_pred cCCCCCCCCchhhhhhhhhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCCC
Q 039163 491 IGINNPGYTSIEQASIWGNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPPH 541 (551)
Q Consensus 491 l~~~~~~~~~~~~~~~~g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~ 541 (551)
++.+. .+++. ..|++.|||+||+||++||+||||+|+|+++|+|+|+
T Consensus 482 ~~~~~-~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 482 LADEE-WNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp GGCTT-TCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ccccc-cccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 75211 11111 2499999999999999999999999999999999986
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=6.5e-69 Score=582.10 Aligned_cols=465 Identities=22% Similarity=0.399 Sum_probs=362.6
Q ss_pred chhhHHHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcC
Q 039163 40 NENLFLDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSG 119 (551)
Q Consensus 40 ~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~gg 119 (551)
..+.|..||... ...++.|+++.|.... .+|+......|.+||+|+|++||+++|++|+++++|+.+|||
T Consensus 5 ~~~~l~~~l~~~----~~~~~~~~~~~y~~~~------~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 74 (503)
T 1zr6_A 5 EFNSINACLAAA----DVEFHEEDSEGWDMDG------TAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGG 74 (503)
T ss_dssp TTCHHHHHHHHT----TCEECCTTSHHHHHHT------SCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHhhCcC----CceecCCCccchHHHh------hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 346788888764 2367899999999763 246655567999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCC
Q 039163 120 GHDFEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGI 199 (551)
Q Consensus 120 Gh~~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~ 199 (551)
|||+.+.+....+++++|||++||+|++| ++++|+||+|++|.+|+++|.+++ ++.++.|.|++|||||+++|||+|+
T Consensus 75 Gh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~gGg~g~ 152 (503)
T 1zr6_A 75 GHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLGGGYGF 152 (503)
T ss_dssp CCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHHCCCST
T ss_pred CcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcCCCCCc
Confidence 99998765532224899999999999999 888999999999999999998775 5888999999999999999999999
Q ss_pred cccccCchhhheeeEEEEecCcceee-ccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecc-hhhHHH
Q 039163 200 MLRKFGLAADNIVDAHLIDAHGRLLD-RKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTL-EQNATK 277 (551)
Q Consensus 200 ~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~-~~~~~~ 277 (551)
++++||+++|+|+++|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|+.+..+.+.+.+ .+.+.+
T Consensus 153 ~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~ 231 (503)
T 1zr6_A 153 ATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVA 231 (503)
T ss_dssp THHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHH
T ss_pred ccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHH
Confidence 99999999999999999999999997 6667899999999998 69999999999999999876666666654 344668
Q ss_pred HHHHHHHHHhh-hcccceEEEEEEecCCceEEEEEEEeeCCccCchhhhhhhcccCCC--CcCcccccChHHHHHhhccC
Q 039163 278 IVHKWQYVANN-LHEDLVIEVGLIKMNSSMLAAFSSLFLGGVDRLLPLMQESFPELGL--RKDDCTEMSWIESVHNLAGF 354 (551)
Q Consensus 278 ~~~~~~~~~~~-~p~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~ 354 (551)
++++|+++... +|+++++.+.+.. ..+.+.++|+|+.+++.+++++++..++. ...++..++|.+.+..+...
T Consensus 232 ~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (503)
T 1zr6_A 232 GLKALQDWAQNTMPRELSMRLEINA----NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYG 307 (503)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEET----TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCTT
T ss_pred HHHHHHHHHhhcCChhHEEEEEEeC----CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcCC
Confidence 88999998876 8898887776653 25566788999988877777765433333 13345667888654332210
Q ss_pred CCCCchhhhhhcccccCCcccccCCCCCccccccCcCCCCCHHHHHHHHHHHh-hcCC---ceEEEEEEecCC---cCCC
Q 039163 355 DKGQSLDLLLDRNARSNGLVVKSTTKSPFKAKADYVKQPIPENAFEGIYDKFY-EEEG---ETAFIVLVPYGG---KMSE 427 (551)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~l~~~~~-~~~~---~~~~i~~~~~GG---av~~ 427 (551)
. . ++... . ...+..++.++.++++ ++++.++.+++.+. +.+. ..+.+.++++|| ++.+
T Consensus 308 ~---~----~~~~~------p-~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~ 372 (503)
T 1zr6_A 308 A---D----LNITY------N-YDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAA 372 (503)
T ss_dssp C---C----SSCSS------C-CCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGG
T ss_pred C---c----ccccC------C-CCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcC
Confidence 0 0 00000 0 0122346667788776 88999999999887 5321 235688999999 8999
Q ss_pred CCCCCCCCCCCCCceEEEEEEeec-----CCCccchHHHHHHHHHHHhhcccccCCCCCcccccCCCCcCCCCCCCCchh
Q 039163 428 ISESETPFPHRAGNLYKIFYGVSW-----GGDGISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGINNPGYTSIE 502 (551)
Q Consensus 428 v~~~~taf~~Rd~~~~~i~~~~~W-----~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~dl~~~~~~~~~~~ 502 (551)
+++++++|+||+ ..|++++...| .+++.++...+|++++.+.+.........++|+||+|.+++
T Consensus 373 ~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~---------- 441 (503)
T 1zr6_A 373 VSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT---------- 441 (503)
T ss_dssp SCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC----------
T ss_pred CCcccCCccccc-ceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc----------
Confidence 999999999998 68888876666 34444556678888777766654321123799999998765
Q ss_pred hhhhhhhhhhhccHHHHHHhHhhcCCCCCCCCCCCCCCCCCCCCCC
Q 039163 503 QASIWGNKYFKNNFKRLVHVKTMADPHNFFRNEQSIPPHTSRRNKN 548 (551)
Q Consensus 503 ~~~~~g~~yyg~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~~~~~~ 548 (551)
...|++.|||+||+||++||+||||+|+|+++|+|+|..-.+.++
T Consensus 442 -~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~w~~~~~ 486 (503)
T 1zr6_A 442 -KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAYLEQKL 486 (503)
T ss_dssp -HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCCC-----
T ss_pred -cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchhhhhhhc
Confidence 236999999999999999999999999999999999875544443
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=8.2e-66 Score=553.02 Aligned_cols=435 Identities=24% Similarity=0.315 Sum_probs=340.5
Q ss_pred CceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCE
Q 039163 55 ISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPF 134 (551)
Q Consensus 55 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~g 134 (551)
+++.|++|+++.|+..+. +|+......|.+||+|+|++||+++|++|+++++|+.+||||||+.+.+... ++
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~g 83 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GG 83 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SS
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--Ce
Confidence 367899999999998643 4776667799999999999999999999999999999999999998876544 48
Q ss_pred EEEEeeCCcceEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeE
Q 039163 135 VVIDLINLCKISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDA 214 (551)
Q Consensus 135 vvidl~~l~~i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~ 214 (551)
++|||++||+|++|+++.+|+||||++|.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+.+|+|+++
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~ 161 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILGA 161 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEEE
Confidence 999999999999999999999999999999999999875 788899999999999999999999999999999999999
Q ss_pred EEEecCcceee-ccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecchhhHH--HHHHHHHHHHhhhcc
Q 039163 215 HLIDAHGRLLD-RKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNAT--KIVHKWQYVANNLHE 291 (551)
Q Consensus 215 ~vV~a~G~iv~-~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~ 291 (551)
|||++||++++ +..+|+|||||+|||+ |+|||||+++||++|.|..+....+.|+..+ +. ++++.|+++....|+
T Consensus 162 ~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 239 (459)
T 2bvf_A 162 TLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPSV-SELAGLLTSLLDALNEMAD 239 (459)
T ss_dssp EEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCCH-HHHHHHHHHHHHHHHHTTT
T ss_pred EEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechHH-hhHHHHHHHHHHHHHhCcH
Confidence 99999999997 5667899999999988 8999999999999999766666666676532 34 788889988877787
Q ss_pred cceEEEEEEec-CCceEEEEEEEeeCCccCchhhhhhhcccCC-CCcCcccccChHHHHHhhccCCCCCchhhhhhcccc
Q 039163 292 DLVIEVGLIKM-NSSMLAAFSSLFLGGVDRLLPLMQESFPELG-LRKDDCTEMSWIESVHNLAGFDKGQSLDLLLDRNAR 369 (551)
Q Consensus 292 ~l~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (551)
.+...+.+... .+...+.+...|.|+.+++.+.+++. .+++ +....+..++|.+...... ..+....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~- 308 (459)
T 2bvf_A 240 HIYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNA---------EVGSFED- 308 (459)
T ss_dssp TCCCEEEEEECTTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHH---------HHSCCCC-
T ss_pred hhccccccCcccCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhccc---------ccccCCC-
Confidence 77433322211 23345566678889877666666653 3443 3344567778877433210 0000000
Q ss_pred cCCcccccCCCCCccc-cccCcCCCCCHHHHHHHHHHHhhcC-Cc-eEEEEEEecCCcCCCCCCCCCCCCCCCCceEEEE
Q 039163 370 SNGLVVKSTTKSPFKA-KADYVKQPIPENAFEGIYDKFYEEE-GE-TAFIVLVPYGGKMSEISESETPFPHRAGNLYKIF 446 (551)
Q Consensus 370 ~~~~~~~~~~~~~~~~-~s~~~~~~l~~~~i~~l~~~~~~~~-~~-~~~i~~~~~GGav~~v~~~~taf~~Rd~~~~~i~ 446 (551)
. ...+.. ++.++++.++.+.++.+++.+.+.+ .. .+.+++. ||++.+ .+.|+|+||+ ..| ++
T Consensus 309 --------~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--gg~~~~--~~~ta~~~R~-~~~-~~ 373 (459)
T 2bvf_A 309 --------G-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIE--GMPFGN--PKRTPARHRD-AMG-VL 373 (459)
T ss_dssp --------S-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEE--CCCCCC--TTCCSSCCCS-SCE-EE
T ss_pred --------C-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEe--CCccCC--CCCCCcccCC-cce-EE
Confidence 1 111222 5666653456677777776665544 33 3334444 888776 6789999999 477 88
Q ss_pred EEeecCCCc-cchHHHHHHHHHHHhhcccccCCCCCcccccCCCCcCCCCCCCCchhhhhhhhhhhhhcc-HHHHHHhHh
Q 039163 447 YGVSWGGDG-ISQRHIDWIRSLYSYMTPYVSKNPREAYVNYRDLDIGINNPGYTSIEQASIWGNKYFKNN-FKRLVHVKT 524 (551)
Q Consensus 447 ~~~~W~~~~-~~~~~~~w~~~~~~~l~~~~~~~~~~~Y~Nyad~dl~~~~~~~~~~~~~~~~g~~yyg~n-~~RL~~IK~ 524 (551)
+...|.++. +++.+.+|++++++.+.++......++|+||+|.+. ..|.+.|||+| |+||++||+
T Consensus 374 ~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~-------------~~~~~~~yG~~n~~rL~~iK~ 440 (459)
T 2bvf_A 374 ALAEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT-------------AEMVAEVYKPEVYSRLAAVKR 440 (459)
T ss_dssp EEEEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC-------------HHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEEeCCCccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc-------------hHHHHHHhCcchHHHHHHHHH
Confidence 889998876 677889999999999999842112478999999762 26889999987 999999999
Q ss_pred hcCCCCCCCCCCCCCC
Q 039163 525 MADPHNFFRNEQSIPP 540 (551)
Q Consensus 525 kyDP~nvF~~~qsI~~ 540 (551)
||||+|+|+++|+|+|
T Consensus 441 kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 441 EYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHCTTCCCCSSSCCCC
T ss_pred HhCcccccCCCCCCCC
Confidence 9999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=9.2e-41 Score=364.76 Aligned_cols=219 Identities=18% Similarity=0.260 Sum_probs=174.6
Q ss_pred chhhHHHhhhcCCCCCceeEecCCCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHh--c-CCcEEE
Q 039163 40 NENLFLDCLRSDNSSISQVIYTKYSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKK--Q-GLQIRV 116 (551)
Q Consensus 40 ~~~~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~--~-~~~~~~ 116 (551)
...++..||.... +.+.|.+ +...+... ...|+......|.+|++|+|++||+++|++|++ + ++|+.+
T Consensus 30 ~~~~~~~~l~~~~--~~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~ 100 (534)
T 1w1o_A 30 RGRPWPASLAALA--LDGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAF 100 (534)
T ss_dssp ----------CTT--TTTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEE
T ss_pred chHHHHHHHHhcC--CCceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 3456778886522 2455554 22233332 223666566789999999999999999999998 6 999999
Q ss_pred EcCCCCCCCCccccCCCEEEEEeeCCcce------EEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCC-CCCCccccc
Q 039163 117 RSGGHDFEGLSYVSHVPFVVIDLINLCKI------SVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPG-GVCPTVGVG 189 (551)
Q Consensus 117 ~ggGh~~~g~~~~~~~~gvvidl~~l~~i------~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvg 189 (551)
||||||+.|.+...+ +++|||++||+| ++|+++.+|+||||++|.+|++++.++| +..+. +.+..++||
T Consensus 101 ~G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G--l~~~~~~~~~~~tvG 176 (534)
T 1w1o_A 101 RGRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYLTVG 176 (534)
T ss_dssp ESSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCSBHH
T ss_pred ECCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC--CcccCCCCCCCEEec
Confidence 999999998877654 899999999984 8898889999999999999999999886 44443 445678999
Q ss_pred ccccCCCCCCcccccCchhhheeeEEEEecCcceee-ccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEe
Q 039163 190 GHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD-RKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTIT 268 (551)
Q Consensus 190 G~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~ 268 (551)
|.+.++|.|..+++||.++|+|+++|||++||++++ +..+|+||||++|||+ |+|||||+++||++|.|+....+.+.
T Consensus 177 G~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~ 255 (534)
T 1w1o_A 177 GTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFV 255 (534)
T ss_dssp HHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEE
T ss_pred eeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEE
Confidence 999999999999999999999999999999999997 5567899999999998 89999999999999999876666666
Q ss_pred ecch
Q 039163 269 RTLE 272 (551)
Q Consensus 269 ~~~~ 272 (551)
|...
T Consensus 256 ~~~~ 259 (534)
T 1w1o_A 256 YTDF 259 (534)
T ss_dssp ESCH
T ss_pred eCCH
Confidence 7543
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=6.5e-35 Score=317.08 Aligned_cols=197 Identities=20% Similarity=0.334 Sum_probs=166.8
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHh-cCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcceEEcC-----CC-
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKK-QGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKISVDA-----KQ- 151 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~-~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i~id~-----~~- 151 (551)
.|+......|.+||+|+|++||+++|++|++ +++|+.+||||||+.|.+...+ +|+|||++||+|+||+ ++
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 3665556789999999999999999999996 9999999999999988776544 8999999999987776 55
Q ss_pred -CEEEEcCCCCHHHHHHHHH-HhcCCcccCC-CCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceee-cc
Q 039163 152 -KTAWVQSGATLGQLYYRIA-EKSKNLGFPG-GVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD-RK 227 (551)
Q Consensus 152 -~~v~v~~G~~~~~l~~~l~-~~g~~l~~~~-g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~ 227 (551)
.+|+||||++|.++++++. ++| +..+. +.++.++|||.+.++|.|..+.+||.++|+|++++||++||++++ ..
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~G--l~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~~ 208 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYG--LAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCSE 208 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHS--EECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEES
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcC--CCCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEECC
Confidence 7999999999999876655 876 44222 445678999999999999999999999999999999999999997 44
Q ss_pred CCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecchhhHHHHHH
Q 039163 228 SMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNATKIVH 280 (551)
Q Consensus 228 ~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 280 (551)
.+|+||||++||+. |+|||||+++||++|.|+....+.+.|...+++.+.+.
T Consensus 209 ~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~ 260 (524)
T 2exr_A 209 IENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAE 260 (524)
T ss_dssp SSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHH
T ss_pred CCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHH
Confidence 56899999999998 89999999999999999877666677765444444343
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.5e-33 Score=302.35 Aligned_cols=204 Identities=22% Similarity=0.285 Sum_probs=176.2
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcce-EEcCCCCEEEEc
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKI-SVDAKQKTAWVQ 157 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i-~id~~~~~v~v~ 157 (551)
.|+......|.+||+|+|++||+++|++|+++++|+.+||||||+.|.+.... ++|+|||++||+| ++|+++.+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 47655567999999999999999999999999999999999999998776643 5899999999998 899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceee------ccCCCc
Q 039163 158 SGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD------RKSMGE 231 (551)
Q Consensus 158 ~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~------~~~~~~ 231 (551)
||++|.+|++++.++|+.+.+.++.+..++|||.+.+++.|..+.+||..+|+|+++|||++||++++ ....++
T Consensus 122 aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~g~ 201 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGY 201 (476)
T ss_dssp TTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCSSC
T ss_pred CCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCCCc
Confidence 99999999999999875333344777788999999999999999999999999999999999999985 133568
Q ss_pred hhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecchhhHHHHHHHHHH
Q 039163 232 DLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNATKIVHKWQY 284 (551)
Q Consensus 232 dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (551)
||+|+++|++ |+|||||+++||++|.|+......+.|+..+++.+++..++.
T Consensus 202 dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 202 DLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 9999999997 899999999999999998766666777655555565655554
No 14
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=6.1e-32 Score=289.91 Aligned_cols=178 Identities=20% Similarity=0.288 Sum_probs=158.6
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhc--CCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcce-EEcCCCCEEE
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQ--GLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKI-SVDAKQKTAW 155 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~--~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i-~id~~~~~v~ 155 (551)
.|.. ....|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+... +|++|||++||+| ++|+++++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4754 477999999999999999999999999 79999999999997665533 3899999999998 9999999999
Q ss_pred EcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceee-ccC-CCchh
Q 039163 156 VQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD-RKS-MGEDL 233 (551)
Q Consensus 156 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~-~~~dL 233 (551)
||||+++.+|+++|.++|+.+...+|. +.++|||.+.+|++|..++.||..+|+|+++|||++||++++ +.. +|+||
T Consensus 112 v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~dL 190 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAEL 190 (481)
T ss_dssp EETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTHHH
T ss_pred EcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCChHH
Confidence 999999999999999987533333455 468899999999999999999999999999999999999997 555 78999
Q ss_pred hhhhhcccCCCceEEEEEEEEEEecCce
Q 039163 234 FWAIRGGGGASFGVVVAWKLRLVTVPST 261 (551)
Q Consensus 234 f~a~rG~g~g~fGiVt~~~~~~~p~~~~ 261 (551)
|||+|||+ |+|||||+++||++|.|+.
T Consensus 191 f~a~rgs~-G~~GIIt~~tl~l~p~~~~ 217 (481)
T 4feh_A 191 FWATVGGN-GLTGIIMRATIEMTPTSTA 217 (481)
T ss_dssp HHHHTTCT-TTTCEEEEEEEECEECSCS
T ss_pred HHHhhccC-CCceEEEEEEEEEEeCCcc
Confidence 99999997 8999999999999998864
No 15
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=7.1e-33 Score=308.81 Aligned_cols=202 Identities=19% Similarity=0.214 Sum_probs=175.7
Q ss_pred cCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCcccc---CCCEEEEEeeCCcce-EEcCCCCEEE
Q 039163 80 FSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVS---HVPFVVIDLINLCKI-SVDAKQKTAW 155 (551)
Q Consensus 80 ~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~---~~~gvvidl~~l~~i-~id~~~~~v~ 155 (551)
|+...+..|.+||+|+|+|||+++|++|+++++||.+||||||+.|..... ..++|+|||++||+| +||+++++++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 555667799999999999999999999999999999999999987654432 135899999999998 8999999999
Q ss_pred EcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceee-----ccCCC
Q 039163 156 VQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD-----RKSMG 230 (551)
Q Consensus 156 v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~-----~~~~~ 230 (551)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|+.+.+||.+.|+|+++|||++||+|++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999986555556888889999999999999999999999999999999999999985 23457
Q ss_pred chhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEeecchhhHHHHHHHH
Q 039163 231 EDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNATKIVHKW 282 (551)
Q Consensus 231 ~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (551)
+||+|.++|+. |+|||||+++||++|.|+......+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 89999999998 8999999999999999998777777777545455544433
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.98 E-value=2.9e-30 Score=274.15 Aligned_cols=173 Identities=20% Similarity=0.276 Sum_probs=153.9
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcce-EEcCCCCEEEEc
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKI-SVDAKQKTAWVQ 157 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i-~id~~~~~v~v~ 157 (551)
.|+......|.+|++|+|++||+++|++| +|+.++|||||+.+.+.. ..++++|||++||+| ++|+++++|+||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 48777778999999999999999999998 899999999999877662 224899999999997 899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCcccCC-CCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceee-ccCCCchhhh
Q 039163 158 SGATLGQLYYRIAEKSKNLGFPG-GVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD-RKSMGEDLFW 235 (551)
Q Consensus 158 ~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~-~~~~~~dLf~ 235 (551)
||+++.+|.++|.++|+ .++. +.++.++|||.+++|++|.. .+||..+|+|++++||++||++++ ...+|+ ||
T Consensus 87 aG~~l~~l~~~l~~~Gl--~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~--f~ 161 (422)
T 2vfr_A 87 GGVRYAELARVVHARGL--ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER--FG 161 (422)
T ss_dssp TTCBHHHHHHHHHHTTE--ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--GG
T ss_pred CCCCHHHHHHHHHHcCC--cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--cc
Confidence 99999999999999875 4553 77888999999999999976 699999999999999999999997 444454 99
Q ss_pred hhhcccCCCceEEEEEEEEEEecCceE
Q 039163 236 AIRGGGGASFGVVVAWKLRLVTVPSTV 262 (551)
Q Consensus 236 a~rG~g~g~fGiVt~~~~~~~p~~~~~ 262 (551)
+++|+. |++||||+++||++|.|+..
T Consensus 162 ~~~g~~-G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 162 GAVTSL-GALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp GTSSCT-TTTCEEEEEEEECEECCEEE
T ss_pred eEEecC-CCCEEEEEEEEEEEecCceE
Confidence 999997 89999999999999998754
No 17
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=2.9e-31 Score=290.85 Aligned_cols=199 Identities=20% Similarity=0.260 Sum_probs=167.0
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccC--CCEEEEEeeCCcce-EEcCCCCEEEEcCCC
Q 039163 84 NTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSH--VPFVVIDLINLCKI-SVDAKQKTAWVQSGA 160 (551)
Q Consensus 84 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--~~gvvidl~~l~~i-~id~~~~~v~v~~G~ 160 (551)
....|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+.... +++|+|||++||+| ++|+++.+|+||||+
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv 213 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGI 213 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCC
Confidence 345899999999999999999999999999999999999987665431 35899999999999 899999999999999
Q ss_pred CHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceee----ccCCCchhhhh
Q 039163 161 TLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLD----RKSMGEDLFWA 236 (551)
Q Consensus 161 ~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~----~~~~~~dLf~a 236 (551)
+|.+|+++|.++|+.+...+++...++|||.+++++.|+.+.+||.++|+|+++|||++||++++ +...++||+|+
T Consensus 214 ~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~ 293 (584)
T 2uuu_A 214 MGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHI 293 (584)
T ss_dssp BHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHH
T ss_pred cHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhh
Confidence 99999999999874332222334557899999999999999999999999999999999999886 34468999999
Q ss_pred hhcccCCCceEEEEEEEEEEecCceEEEEEEeecchhhHHHHHHHHH
Q 039163 237 IRGGGGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNATKIVHKWQ 283 (551)
Q Consensus 237 ~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (551)
++|++ |+|||||+++||++|.|+....+.+.|+..+++.+++..+.
T Consensus 294 ~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~ 339 (584)
T 2uuu_A 294 ILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIR 339 (584)
T ss_dssp HTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHH
T ss_pred hccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHH
Confidence 99998 89999999999999999877677777765444444444443
No 18
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=8.5e-30 Score=277.25 Aligned_cols=198 Identities=23% Similarity=0.313 Sum_probs=165.1
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC-CCccccCCCEEEEEeeCCcce-EEcCCCCEEEEcCCCCH
Q 039163 85 TPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFE-GLSYVSHVPFVVIDLINLCKI-SVDAKQKTAWVQSGATL 162 (551)
Q Consensus 85 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~gvvidl~~l~~i-~id~~~~~v~v~~G~~~ 162 (551)
...|.+||+|+|++||+++|++|+++++|+.++|+|||+. |.+.....++|+|||++||+| ++|+++++++||||++|
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~ 133 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTF 133 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCH
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCH
Confidence 4589999999999999999999999999999999999986 654431124899999999999 99999999999999999
Q ss_pred HHHHHHHHHhcCCcccCCC---CCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceeec---cCCCchhhhh
Q 039163 163 GQLYYRIAEKSKNLGFPGG---VCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLDR---KSMGEDLFWA 236 (551)
Q Consensus 163 ~~l~~~l~~~g~~l~~~~g---~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~~---~~~~~dLf~a 236 (551)
.+|+++|.++|+ .++++ ....+||||.++++|.|.. +||...|+|+++|||++||++++. ..+++|+|++
T Consensus 134 ~~l~~~l~~~Gl--~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 134 GQMYDYIQENNL--PVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp HHHHHHHHHTTC--SEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred HHHHHHHHHcCC--cccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 999999999875 44433 2336889999999988886 999999999999999999999973 2357898777
Q ss_pred hhcccC---------CCceEEEEEEEEEEecCceEEEEEEeecchhhHHHHHHHHHHHH
Q 039163 237 IRGGGG---------ASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNATKIVHKWQYVA 286 (551)
Q Consensus 237 ~rG~g~---------g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (551)
.|||.| ++|||||+++||++|.|+....+.+.|+..+++.++++.++.+.
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 777642 59999999999999999876667777875555556566666554
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=2e-29 Score=275.83 Aligned_cols=198 Identities=11% Similarity=0.095 Sum_probs=164.1
Q ss_pred ceeEecC-CCCChhhhhhccccccCcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccC---
Q 039163 56 SQVIYTK-YSPSYSSVLSSSTQNLRFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSH--- 131 (551)
Q Consensus 56 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~--- 131 (551)
.+.+++| +++.|..... .|+......|.+|++|+|++||+++|++|+++++|+.++|+|||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~~------~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAYQ------NWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEEE------CTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHHh------hhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 4567788 9999997632 48777778999999999999999999999999999999999999865443221
Q ss_pred CCEEEEEe-eCCcceEEcC--CCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCc--------
Q 039163 132 VPFVVIDL-INLCKISVDA--KQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIM-------- 200 (551)
Q Consensus 132 ~~gvvidl-~~l~~i~id~--~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~-------- 200 (551)
.++++||| ++||+|++|+ ++++|+||||+++.+|+++|.++|+.+...++. +.++|||.+.+|++|..
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~~ 161 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTT 161 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCccc
Confidence 24899999 8999999998 788999999999999999999997544333343 55788898877766664
Q ss_pred --ccccCchhhheeeEEEEecCcc---eeeccCCCchhhhhhhcccCCCceEEEEEEEEEEecCceEE
Q 039163 201 --LRKFGLAADNIVDAHLIDAHGR---LLDRKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVT 263 (551)
Q Consensus 201 --~~~~G~~~D~v~~~~vV~a~G~---iv~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~ 263 (551)
+.+||..+|+|+++|||++||+ +++...+++||+|+++|.| + ||||+++||++|.++...
T Consensus 162 ~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~~ 226 (561)
T 2i0k_A 162 LPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQRC 226 (561)
T ss_dssp CTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT-S--SCEEEEEEECEECCEEEE
T ss_pred ccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC-C--EEEEEEEEEEEECCceEE
Confidence 6689999999999999999999 6653334789999999664 3 899999999999987443
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=3.8e-28 Score=266.13 Aligned_cols=201 Identities=17% Similarity=0.150 Sum_probs=163.8
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC-CCccccCCCEEEEEe-eCCcce-EEcCCCCEEEEcCCC
Q 039163 84 NTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFE-GLSYVSHVPFVVIDL-INLCKI-SVDAKQKTAWVQSGA 160 (551)
Q Consensus 84 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~-g~~~~~~~~gvvidl-~~l~~i-~id~~~~~v~v~~G~ 160 (551)
....|.+||+|+|++||+++|++|+++++|+.+||+|||+. |.......++|+||| ++||+| ++|+++++|+||||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv 146 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGV 146 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCC
Confidence 34589999999999999999999999999999999999986 544421114899999 999999 999999999999999
Q ss_pred CHHHHHHHHHHhcCC--cccCCCCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCcceeec-c--CCCc----
Q 039163 161 TLGQLYYRIAEKSKN--LGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLLDR-K--SMGE---- 231 (551)
Q Consensus 161 ~~~~l~~~l~~~g~~--l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~~-~--~~~~---- 231 (551)
++.+|+++|.++|+. +.+.++.....||||.++++|.|.. +||..+|+|+++|||++||++++. . ..++
T Consensus 147 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~ 224 (560)
T 1e8g_A 147 TYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPE 224 (560)
T ss_dssp BHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGG
T ss_pred CHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccc
Confidence 999999999999764 3333344446789999988888865 999999999999999999999972 2 1221
Q ss_pred -----------hhhhhhhcc----------cCCCceEEEEEEEEEEecCceEEEEEEeecchhhHHHHHHHHHHHH
Q 039163 232 -----------DLFWAIRGG----------GGASFGVVVAWKLRLVTVPSTVTRFTITRTLEQNATKIVHKWQYVA 286 (551)
Q Consensus 232 -----------dLf~a~rG~----------g~g~fGiVt~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (551)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 225 ~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 225 TMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 667777654 2379999999999999999877777788876556666666666654
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=1.3e-28 Score=264.09 Aligned_cols=178 Identities=16% Similarity=0.205 Sum_probs=148.8
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCcccc---CCCEEEEEee-CCcceEEcCC--CC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVS---HVPFVVIDLI-NLCKISVDAK--QK 152 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~---~~~gvvidl~-~l~~i~id~~--~~ 152 (551)
.|+......|.+|++|+|++||+++|++|+++++|++++|+|||+.+..... .+++|+|||+ +||+|++|++ .+
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 3888778899999999999999999999999999999999999985322211 1248999995 7999999975 57
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCCcccCC-CCCCcccccccccCCCCCCc----------ccccCchhhheeeEEEEecCc
Q 039163 153 TAWVQSGATLGQLYYRIAEKSKNLGFPG-GVCPTVGVGGHFSGGGYGIM----------LRKFGLAADNIVDAHLIDAHG 221 (551)
Q Consensus 153 ~v~v~~G~~~~~l~~~l~~~g~~l~~~~-g~~~~vgvgG~~~gGg~g~~----------~~~~G~~~D~v~~~~vV~a~G 221 (551)
+|+||||+++.+|+++|.++| +.++. +.++.++|||.+++|++|.. +++||..+|+|++++||++||
T Consensus 101 tVtV~AGv~l~~L~~~L~~~G--L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~adG 178 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAG--LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYDK 178 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTT--EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEET
T ss_pred EEEEccCCCHHHHHHHHHHcC--CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCCC
Confidence 999999999999999999986 45552 33466899999999988886 689999999999999999999
Q ss_pred c-----eeeccCCCchhhhhhhcccCCCceEEEEEEEEEEecCce
Q 039163 222 R-----LLDRKSMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPST 261 (551)
Q Consensus 222 ~-----iv~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~ 261 (551)
+ +++...+++||| ++|+|. |. ||||+++||++|.++.
T Consensus 179 ~~~~~~i~~~s~~~~DL~-a~r~G~-G~-gIVTevtlrl~P~~~l 220 (540)
T 3js8_A 179 ASGAYALRKFARNDPQIA-PLLAHV-GR-SLIVEATLQAAPNQRL 220 (540)
T ss_dssp TTTEEEEEEEETTSGGGH-HHHTCT-TS-SCEEEEEEEEEECCEE
T ss_pred CCceeeEEEeCCCChhHH-HHHhcC-CC-eEEEEEEEEEEECCce
Confidence 8 666333689985 555555 45 6999999999999863
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=1.9e-28 Score=266.73 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=163.0
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCC----CEEEEEeeCCcce-EEcCCCCEEEEcC
Q 039163 84 NTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHV----PFVVIDLINLCKI-SVDAKQKTAWVQS 158 (551)
Q Consensus 84 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~----~gvvidl~~l~~i-~id~~~~~v~v~~ 158 (551)
....|.+||+|+|++||+++|++|+++++|+.++|||||+.|.+...++ ++|+|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 3468999999999999999999999999999999999999887765431 3899999999999 7994 57999999
Q ss_pred CCCHHHHHHHHHHhcCCcccCC---CCCCcccccccccCCCCCCcccccCchhh----------------heeeEEEEec
Q 039163 159 GATLGQLYYRIAEKSKNLGFPG---GVCPTVGVGGHFSGGGYGIMLRKFGLAAD----------------NIVDAHLIDA 219 (551)
Q Consensus 159 G~~~~~l~~~l~~~g~~l~~~~---g~~~~vgvgG~~~gGg~g~~~~~~G~~~D----------------~v~~~~vV~a 219 (551)
|+++.+|.++|.++|+ .++. +.|..++|||.+.+++.|..+.+||...| +|++++||++
T Consensus 121 Gv~l~~L~~~l~~~Gl--~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGR--EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp TCBHHHHHHHHGGGTE--ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred CcCHHHHHHHHHhcCc--cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 9999999999999864 4433 34455689999999999999999999999 9999999999
Q ss_pred Ccceee-c-----------------cCCCc-----------------hhhhhh--hcccCCCceEEEEEEEEEEecCceE
Q 039163 220 HGRLLD-R-----------------KSMGE-----------------DLFWAI--RGGGGASFGVVVAWKLRLVTVPSTV 262 (551)
Q Consensus 220 ~G~iv~-~-----------------~~~~~-----------------dLf~a~--rG~g~g~fGiVt~~~~~~~p~~~~~ 262 (551)
||++++ . ...+. ||+|++ +|+. |+||| |++++|++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 999985 2 12223 988888 9987 89999 99999999999876
Q ss_pred EEEEEeecchhhHHHHHHHHH
Q 039163 263 TRFTITRTLEQNATKIVHKWQ 283 (551)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~ 283 (551)
..+.+.|+..+++.+++..+.
T Consensus 277 ~~~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 277 QVFYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHH
Confidence 667777765444555554444
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=1.7e-25 Score=227.31 Aligned_cols=163 Identities=20% Similarity=0.219 Sum_probs=135.2
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHH
Q 039163 84 NTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLG 163 (551)
Q Consensus 84 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~ 163 (551)
....|.++++|+|++||+++|++|+++++|+.++|+|||+.+.+...+ +++|||++|++|++| +.+++||||++|.
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~~--gvvI~l~~~~~I~~d--~~~v~v~aG~~~~ 126 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGIR--GVILHLDLLQTIERN--NTQIVAMSGAKLI 126 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCCC--eEEEECCCCCcEEEC--CCEEEEecCcCHH
Confidence 345899999999999999999999999999999999999875443333 899999999999886 4599999999999
Q ss_pred HHHHHHHHhcC-CcccCCCCCCccccccccc--CCCCCCcccccCchhhheeeEEEEecCcceeeccCCCchhhhhhhcc
Q 039163 164 QLYYRIAEKSK-NLGFPGGVCPTVGVGGHFS--GGGYGIMLRKFGLAADNIVDAHLIDAHGRLLDRKSMGEDLFWAIRGG 240 (551)
Q Consensus 164 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~--gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv~~~~~~~dLf~a~rG~ 240 (551)
+|++++.++|+ |+.+..|.+++|| |.+. .||+| |..+|+|++++||++||++++.. ++|++|++|++
T Consensus 127 ~l~~~l~~~Gl~Gle~~~giPgTVG--Gav~~NaGgyG------g~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~s 196 (322)
T 3tx1_A 127 DTAKFALNESLSGLEFACGIPGSIG--GALHMNAGAYG------GEISDVLEAATVLTQTGELKKLK--RSELKAAYRFS 196 (322)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSBHH--HHHHHTCEETT------EEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-C
T ss_pred HHHHHHHHcCCcccccCCCCcchhH--HHHHhCccCcc------cchHhhEEEEEEEcCCCCEEEec--hHHcCcchhhc
Confidence 99999999987 5678888887765 4444 34433 79999999999999999999743 26999999987
Q ss_pred cCC-CceEEEEEEEEEEecCc
Q 039163 241 GGA-SFGVVVAWKLRLVTVPS 260 (551)
Q Consensus 241 g~g-~fGiVt~~~~~~~p~~~ 260 (551)
..+ ++||||+++||++|.|+
T Consensus 197 ~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 197 TIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp TTTGGGCEEEEEEEECEECCH
T ss_pred ccCCCCEEEEEEEEEEEeCCH
Confidence 533 57999999999999874
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1.3e-24 Score=223.04 Aligned_cols=165 Identities=13% Similarity=0.054 Sum_probs=139.9
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcceEEcC--CCCEEEEcCCCC
Q 039163 84 NTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKISVDA--KQKTAWVQSGAT 161 (551)
Q Consensus 84 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i~id~--~~~~v~v~~G~~ 161 (551)
....|.++|+|+|++||+++|++|+++++|+.++|+|||..+.+. .+ |+||+++ |++|+++. ++.+++||||++
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~~--GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~ 102 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-YT--GMIVVNR-LNGIEHQQDDDYHRLHVAGGED 102 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-CC--eEEEEcC-CCceEEeccCCceEEEEeCCCc
Confidence 345789999999999999999999999999999999999876554 33 8999998 99998753 456899999999
Q ss_pred HHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCc-hhhheeeEEEEec-CcceeeccCCCchhhhhhhc
Q 039163 162 LGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGL-AADNIVDAHLIDA-HGRLLDRKSMGEDLFWAIRG 239 (551)
Q Consensus 162 ~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~-~~D~v~~~~vV~a-~G~iv~~~~~~~dLf~a~rG 239 (551)
|.+|.+++.++|+ .|.+..+|+.| +.||+.+++.+.||. ++|+|+++++|++ +|++++.. +.||+|+||+
T Consensus 103 ~~~l~~~a~~~Gl-----~GlE~l~gIPG-tVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~YR~ 174 (357)
T 3i99_A 103 WPSLVSWCVEQGI-----GGLENLALIPG-CAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGYRD 174 (357)
T ss_dssp HHHHHHHHHHTTC-----TTCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBTTB
T ss_pred HHHHHHHHHHcCC-----cCccccCCCCc-hhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccccc
Confidence 9999999999986 24444455555 346899999999997 8999999999999 99999743 3699999998
Q ss_pred ccC----CCceEEEEEEEEEEecCc
Q 039163 240 GGG----ASFGVVVAWKLRLVTVPS 260 (551)
Q Consensus 240 ~g~----g~fGiVt~~~~~~~p~~~ 260 (551)
+.. +++||||+++||++|.++
T Consensus 175 s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 175 SIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp CGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCCccCCCEEEEEEEEEEEeCCc
Confidence 753 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.91 E-value=2.4e-24 Score=220.15 Aligned_cols=160 Identities=21% Similarity=0.218 Sum_probs=133.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHH
Q 039163 84 NTPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLG 163 (551)
Q Consensus 84 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~ 163 (551)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.+ +++|||++||+|++| .++++||||++|.
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id--~~~v~v~aGv~~~ 120 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVS--DDAIIAGSGAAII 120 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEE--TTEEEEETTSBHH
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEc--CCEEEEeCCCcHH
Confidence 345799999999999999999999999999999999999876554333 899999999999987 3699999999999
Q ss_pred HHHHHHHHhcC-CcccCCCCCCcccccccccCCCCCCcccccC-chhhheeeEEEEecCcceeeccCCCchhhhhhhccc
Q 039163 164 QLYYRIAEKSK-NLGFPGGVCPTVGVGGHFSGGGYGIMLRKFG-LAADNIVDAHLIDAHGRLLDRKSMGEDLFWAIRGGG 241 (551)
Q Consensus 164 ~l~~~l~~~g~-~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G-~~~D~v~~~~vV~a~G~iv~~~~~~~dLf~a~rG~g 241 (551)
+|++++.++|+ ++++.++.+++ |||.+..++. .|| ..+|+|++++||++||++++... .|++|++|+..
T Consensus 121 ~l~~~l~~~Gl~gLe~~~~~Pgt--vGG~i~~nag-----gyG~~~~d~v~~v~vv~~~G~i~~~~~--~~~~~gyr~~~ 191 (326)
T 1hsk_A 121 DVSRVARDYALTGLEFACGIPGS--IGGAVYMNAG-----AYGGEVKDCIDYALCVNEQGSLIKLTT--KELELDYRNSI 191 (326)
T ss_dssp HHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCE-----ETTEEHHHHEEEEEEECTTSCEEEEET--TTTTCBTTBCH
T ss_pred HHHHHHHHCCCccccccCCCcch--hhHHHhcccc-----cCchhhhhhEEEEEEEeCCCCEEEECh--HHcCCCccccc
Confidence 99999999876 55566666553 5566654433 388 99999999999999999997433 38999999742
Q ss_pred ---CCCceEEEEEEEEEEec
Q 039163 242 ---GASFGVVVAWKLRLVTV 258 (551)
Q Consensus 242 ---~g~fGiVt~~~~~~~p~ 258 (551)
.| ||||+++||++|.
T Consensus 192 l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 192 IQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp HHHTT--CEEEEEEEECEEC
T ss_pred cCCCC--EEEEEEEEEEEcC
Confidence 13 9999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.90 E-value=5.8e-23 Score=210.14 Aligned_cols=164 Identities=16% Similarity=0.081 Sum_probs=138.1
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcceE-EcCCC-CEEEEcCCCCH
Q 039163 85 TPKPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKIS-VDAKQ-KTAWVQSGATL 162 (551)
Q Consensus 85 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i~-id~~~-~~v~v~~G~~~ 162 (551)
...|.++++|+|++||+++|++|+++++|+.++|||||..+.+. .+ |+||+|+ |+++. ++.++ .+++||||++|
T Consensus 12 gg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~~--GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~ 87 (340)
T 1uxy_A 12 DHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-YR--GTVIINR-IKGIEIHDEPDAWYLHVGAGENW 87 (340)
T ss_dssp CCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-EE--EEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-CC--eEEEEcc-CCCcEEEecCCCeEEEEecCCCH
Confidence 34799999999999999999999999999999999999876543 33 8999996 99985 56565 68999999999
Q ss_pred HHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCc-hhhheeeEEEEec-CcceeeccCCCchhhhhhhcc
Q 039163 163 GQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGL-AADNIVDAHLIDA-HGRLLDRKSMGEDLFWAIRGG 240 (551)
Q Consensus 163 ~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~-~~D~v~~~~vV~a-~G~iv~~~~~~~dLf~a~rG~ 240 (551)
.+|.+++.++|+ .|.+..+||.| +.||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|++|++
T Consensus 88 ~~l~~~~~~~Gl-----~Gle~~~gIPG-tVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gYR~s 159 (340)
T 1uxy_A 88 HRLVKYTLQEGM-----PGLENLALIPG-CVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGYRDS 159 (340)
T ss_dssp HHHHHHHHHTTC-----CSCGGGTTCCS-BGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBTTBC
T ss_pred HHHHHHHHHCCC-----CccccccCCcc-chhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhccccCcC
Confidence 999999999875 34444555555 456999999999995 8999999999996 99999743 36999999987
Q ss_pred cC----CCceEEEEEEEEEEecCc
Q 039163 241 GG----ASFGVVVAWKLRLVTVPS 260 (551)
Q Consensus 241 g~----g~fGiVt~~~~~~~p~~~ 260 (551)
.. +++||||+++||+.|.+.
T Consensus 160 ~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 160 IFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp GGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccCCcCCCCEEEEEEEEEEEcCCC
Confidence 42 369999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.86 E-value=7.9e-22 Score=194.88 Aligned_cols=151 Identities=19% Similarity=0.161 Sum_probs=126.0
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcceEEcCCCCEEEEcCCCCHHHHH
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCKISVDAKQKTAWVQSGATLGQLY 166 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~i~id~~~~~v~v~~G~~~~~l~ 166 (551)
.|. +++|+|++||+++| ++|+.++|+|||+.+.+.+.+ +|++|+|++|++|++| . +||||++|.+|.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd--~---~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLK--G---WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTT--S---EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEc--C---EEECCCCHHHHH
Confidence 566 99999999999999 899999999999876554332 3899999999999875 2 999999999999
Q ss_pred HHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccC-chhhheeeEEEEecCcceeeccCCCchhhhhhhcccCCCc
Q 039163 167 YRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFG-LAADNIVDAHLIDAHGRLLDRKSMGEDLFWAIRGGGGASF 245 (551)
Q Consensus 167 ~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G-~~~D~v~~~~vV~a~G~iv~~~~~~~dLf~a~rG~g~g~f 245 (551)
+++.++|+ .|.+..+|++| +.||+..++++.|| .++|+|++++|| +||++++.. +.|++|+||++....-
T Consensus 89 ~~~~~~Gl-----~Gle~~~giPG-tvGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~--~~~l~~~YR~s~~~~~ 159 (268)
T 2gqt_A 89 QEAARAGL-----SGLEGLLGIPA-QVGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYC--PEELGFGYRKSHLPPG 159 (268)
T ss_dssp HHHHHTTE-----ESCGGGTTCCC-BHHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEEC--GGGSCCBTTBCCCSTT
T ss_pred HHHHHcCC-----cCCccccCccc-hhHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEc--hHHcccccCCCCcCCC
Confidence 99999874 25555666666 56789999999999 689999999999 999999743 2699999998762111
Q ss_pred eEEEEEEEEEEecC
Q 039163 246 GVVVAWKLRLVTVP 259 (551)
Q Consensus 246 GiVt~~~~~~~p~~ 259 (551)
||||+++||++|.+
T Consensus 160 gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 160 GIVTRVRLKLKERP 173 (268)
T ss_dssp CEEEEEEECCEECC
T ss_pred ceEEEEEEEEEeCC
Confidence 49999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.8e-19 Score=171.68 Aligned_cols=118 Identities=22% Similarity=0.231 Sum_probs=98.9
Q ss_pred eEEcCCCCEEEEcCCCCHHHHHHHHHHhcCCcccCCCCCCcccccccccCCCCCCcccccCchhhheeeEEEEecCccee
Q 039163 145 ISVDAKQKTAWVQSGATLGQLYYRIAEKSKNLGFPGGVCPTVGVGGHFSGGGYGIMLRKFGLAADNIVDAHLIDAHGRLL 224 (551)
Q Consensus 145 i~id~~~~~v~v~~G~~~~~l~~~l~~~g~~l~~~~g~~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~~~~vV~a~G~iv 224 (551)
+++|+++++|+||+|+++.+|+++|.++|+.+...+|+++. +|||++.+|++| ++||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47889999999999999999999998886432222355665 999999999988 899999 9999999999999998
Q ss_pred e-cc-----CCCchhhhhhhcccCCCceEEEEEEEEEEecCceEEEEEEe
Q 039163 225 D-RK-----SMGEDLFWAIRGGGGASFGVVVAWKLRLVTVPSTVTRFTIT 268 (551)
Q Consensus 225 ~-~~-----~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~~~~~~~~~~~ 268 (551)
+ .. ..++||||+++|++ |+|||||+++||++|.|+....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 6 22 24589999999987 89999999999999998765544443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.12 E-value=6.2e-06 Score=82.21 Aligned_cols=155 Identities=16% Similarity=0.112 Sum_probs=99.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-ccccCCCEEEEEeeC---CcceEEcCCCCEEEEcCCCCH
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGL-SYVSHVPFVVIDLIN---LCKISVDAKQKTAWVQSGATL 162 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~gvvidl~~---l~~i~id~~~~~v~v~~G~~~ 162 (551)
.|--++.|+|.+|+.++++.. +.+..+.|||++.... .......+++||+++ |+.|+.+ ++.+++|+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 455689999999999998753 4679999999995321 011011378999984 6777764 457999999999
Q ss_pred HHHHHH-HHHhcC-Cccc----CCCCC--CcccccccccCCCCCCcccccCchhhhee-------eEEEEecCcceeecc
Q 039163 163 GQLYYR-IAEKSK-NLGF----PGGVC--PTVGVGGHFSGGGYGIMLRKFGLAADNIV-------DAHLIDAHGRLLDRK 227 (551)
Q Consensus 163 ~~l~~~-l~~~g~-~l~~----~~g~~--~~vgvgG~~~gGg~g~~~~~~G~~~D~v~-------~~~vV~a~G~iv~~~ 227 (551)
.++.+. +.+++. ++.. ..|.. +..+|||.+..+.. ..|.+. .+++...+| ..+..
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i~ 148 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTVP 148 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEEE
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEEE
Confidence 999962 333333 2221 22221 12467788876532 344443 588888999 33322
Q ss_pred CCCchhhhhhhcccCCCceEEEEEEEEEEec
Q 039163 228 SMGEDLFWAIRGGGGASFGVVVAWKLRLVTV 258 (551)
Q Consensus 228 ~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p~ 258 (551)
-.|+|+.+|-..-..=.|||+++|.+.+.
T Consensus 149 --~~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 149 --ADGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp --STTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred --HHHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 25888888732211225999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.42 E-value=0.00021 Score=71.05 Aligned_cols=154 Identities=16% Similarity=0.076 Sum_probs=93.8
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC-ccccCCCEEEEEeeC---CcceEEcCCCCEEEEcCCCCH
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGL-SYVSHVPFVVIDLIN---LCKISVDAKQKTAWVQSGATL 162 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~-~~~~~~~gvvidl~~---l~~i~id~~~~~v~v~~G~~~ 162 (551)
.+--++.|+|.+|+.++++.. +-+..+.+|||+.... ........++||+++ |+.|+. +++.+++|+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCcH
Confidence 455689999999999988633 4468999999995321 111111368999986 566766 3458999999999
Q ss_pred HHHHH--HHHHhcCCccc--C-CCC---CCcccccccccCCCCCCcccccCchhhhee-------eEEEEecCcceeecc
Q 039163 163 GQLYY--RIAEKSKNLGF--P-GGV---CPTVGVGGHFSGGGYGIMLRKFGLAADNIV-------DAHLIDAHGRLLDRK 227 (551)
Q Consensus 163 ~~l~~--~l~~~g~~l~~--~-~g~---~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~-------~~~vV~a~G~iv~~~ 227 (551)
.++.+ .+.+.-..+.- . .+. -+..+|||.+..+. ...|.+. .+++..++|+ .+..
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v~ 148 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIVA 148 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEEE
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEEE
Confidence 99984 44432111211 0 111 11246788887662 1345443 5667778884 2211
Q ss_pred CCCchhhhhhhcccCCCceEEEEEEEEEEe
Q 039163 228 SMGEDLFWAIRGGGGASFGVVVAWKLRLVT 257 (551)
Q Consensus 228 ~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p 257 (551)
- .|+|..++-..-..=-|||++.|...+
T Consensus 149 ~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 149 A--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp H--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred H--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 1 477776652111122599999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.00 E-value=0.00074 Score=71.47 Aligned_cols=152 Identities=16% Similarity=0.092 Sum_probs=97.7
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCc-cccCCCEEEEEeeC---CcceEEcCCCCEEEEcCCCCHHHH
Q 039163 90 VIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLS-YVSHVPFVVIDLIN---LCKISVDAKQKTAWVQSGATLGQL 165 (551)
Q Consensus 90 ~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~gvvidl~~---l~~i~id~~~~~v~v~~G~~~~~l 165 (551)
.++.|+|.+|+.++++.. . +..+.+||++....- .......++||+++ |+.|+.+ ++.+++|+++++.++
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~l 252 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAAL 252 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHHH
Confidence 357899999999988752 2 578899999975320 00111368899988 6778775 447999999999999
Q ss_pred HHHHHHhcC-Cc----ccCCCCC--CcccccccccCCCCCCcccccCchhhhee----eEEEEecCcceeeccCCCchhh
Q 039163 166 YYRIAEKSK-NL----GFPGGVC--PTVGVGGHFSGGGYGIMLRKFGLAADNIV----DAHLIDAHGRLLDRKSMGEDLF 234 (551)
Q Consensus 166 ~~~l~~~g~-~l----~~~~g~~--~~vgvgG~~~gGg~g~~~~~~G~~~D~v~----~~~vV~a~G~iv~~~~~~~dLf 234 (551)
.+.+.+ .. .| ....+.. ...+|||.+..+.. .+-...-++ .+++..++|+ .+.. -.|+|
T Consensus 253 ~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp------~sD~~~~L~ALdA~v~l~~~~G~-R~vp--~~dF~ 322 (462)
T 2w3s_A 253 RAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSP------IGDGPPALIAMGASLTLRRGQER-RRMP--LEDFF 322 (462)
T ss_dssp HHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCT------TCSHHHHHHHTTCEEEEEBTTBC-CCCB--GGGGE
T ss_pred HHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCC------cchHHHHHHHcCCEEEEEeCCce-EEEE--HHHhh
Confidence 987432 22 11 1122221 22467788877653 355556666 7888888883 2222 25888
Q ss_pred hhhhcccCCCceEEEEEEEEEEe
Q 039163 235 WAIRGGGGASFGVVVAWKLRLVT 257 (551)
Q Consensus 235 ~a~rG~g~g~fGiVt~~~~~~~p 257 (551)
..+|-..-..=.|||++.|...+
T Consensus 323 ~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 323 LEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EETTEESCCTTCEEEEEEEESCC
T ss_pred cccccccCCCCcEEEEEEEecCC
Confidence 87763211112599999987654
No 32
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=95.86 E-value=0.016 Score=57.48 Aligned_cols=150 Identities=17% Similarity=0.098 Sum_probs=89.4
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCC---ccccCCCEEEEEeeC---CcceEEcCCCCEEEEcCCC
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGL---SYVSHVPFVVIDLIN---LCKISVDAKQKTAWVQSGA 160 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~---~~~~~~~gvvidl~~---l~~i~id~~~~~v~v~~G~ 160 (551)
.|--+++|+|.+|+.++++. +-...+.+||++.... .... ...+||+++ |+.|+. +++.+++|+++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~--~~~lIdl~~i~eL~~I~~--~~~~l~IGA~v 75 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVY--PSCLVDLRNVSELFEISQ--SAGILSVGAMV 75 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCC--CSEEEECTTCGGGGCEEE--ETTEEEEETTC
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCC--CCEEEECCCChhhcCeEE--cCCEEEEcCCC
Confidence 45568899999999998863 2347889999994211 1111 258899987 556665 35689999999
Q ss_pred CHHHHHH--HHHHhcCCcc--cCC-CC---CCcccccccccCCCCCCcccccCchhhhee-------eEEEEecCcceee
Q 039163 161 TLGQLYY--RIAEKSKNLG--FPG-GV---CPTVGVGGHFSGGGYGIMLRKFGLAADNIV-------DAHLIDAHGRLLD 225 (551)
Q Consensus 161 ~~~~l~~--~l~~~g~~l~--~~~-g~---~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~-------~~~vV~a~G~iv~ 225 (551)
++.++.+ .+.++-..+. ... |+ -+..++||.+..+- ...|... .+++..++|+-.-
T Consensus 76 t~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~v 146 (288)
T 1t3q_C 76 THFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSV 146 (288)
T ss_dssp BHHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred cHHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEE
Confidence 9999986 3433211111 001 11 12236788886441 1356554 6777777775221
Q ss_pred ccCCCchhhhhhhcccCCCceEEEEEEEEEE
Q 039163 226 RKSMGEDLFWAIRGGGGASFGVVVAWKLRLV 256 (551)
Q Consensus 226 ~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~ 256 (551)
. - .|+|...+--.-..=-|||++.|...
T Consensus 147 p-~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 147 S-A--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp E-H--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred E-H--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 1 1 36665543111011258999988643
No 33
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=95.83 E-value=0.02 Score=57.16 Aligned_cols=157 Identities=8% Similarity=0.032 Sum_probs=89.2
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCc-cccCCCEEEEEeeC---CcceEEcCCCCEEEEcCCCCH
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLS-YVSHVPFVVIDLIN---LCKISVDAKQKTAWVQSGATL 162 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~gvvidl~~---l~~i~id~~~~~v~v~~G~~~ 162 (551)
.+...++|+|.+|+.++++. +. ...+.+||++....- .......++||+++ |+.|+. +++.+++|+++++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEH--GPEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEE--CCCeEEEccCCcH
Confidence 45578999999999887753 22 368889999964211 00111268899996 556665 3568999999999
Q ss_pred HHHHHHHHHh-------c---C-Cc----ccCCCC--CCcccccccccCCCCCCcccccCchhhhee----eEEEEecCc
Q 039163 163 GQLYYRIAEK-------S---K-NL----GFPGGV--CPTVGVGGHFSGGGYGIMLRKFGLAADNIV----DAHLIDAHG 221 (551)
Q Consensus 163 ~~l~~~l~~~-------g---~-~l----~~~~g~--~~~vgvgG~~~gGg~g~~~~~~G~~~D~v~----~~~vV~a~G 221 (551)
.++.+.+.+. . . .+ ....+. -...+|||.+..+-. .+-..--++ .+++..++|
T Consensus 83 ~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p------~sD~~~~L~AldA~v~l~~~~G 156 (305)
T 3nvz_B 83 SSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP------ISDLNPVFMASGTKLTIVSRGT 156 (305)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT------TCSSHHHHHHHTCEEEEEETTE
T ss_pred HHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC------chHHHHHHHHcCCEEEEEcCCC
Confidence 9998876532 0 0 00 011111 123467788766532 121122222 466777778
Q ss_pred ceeeccCCCchhhhhhhcccCCCceEEEEEEEEEEe
Q 039163 222 RLLDRKSMGEDLFWAIRGGGGASFGVVVAWKLRLVT 257 (551)
Q Consensus 222 ~iv~~~~~~~dLf~a~rG~g~g~fGiVt~~~~~~~p 257 (551)
+-.-. - ..|+|-+++--.-..=-|||++.|...+
T Consensus 157 ~R~vp-~-~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 157 RRTVP-M-DHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp EEEEE-C-CGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred cEEEE-e-ehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 42211 1 1266665542110111499999886433
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.49 E-value=0.19 Score=49.80 Aligned_cols=75 Identities=20% Similarity=0.186 Sum_probs=52.4
Q ss_pred ceEEEecCCHHHHHHHHHHHHhcCC-cEEEEcCCCCCCCC-ccccCCCEEEEEeeCC---cceEEcCCCCEEEEcCCCCH
Q 039163 88 PQVIITPLDVSQVQAAIKCSKKQGL-QIRVRSGGHDFEGL-SYVSHVPFVVIDLINL---CKISVDAKQKTAWVQSGATL 162 (551)
Q Consensus 88 p~~vv~p~s~~dv~~~v~~a~~~~~-~~~~~ggGh~~~g~-~~~~~~~gvvidl~~l---~~i~id~~~~~v~v~~G~~~ 162 (551)
|--+++|+|.+|..++++ +++- ...+.+||++.... .........+||++++ +.|+. +++.+++|+++++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 446789999999887765 3332 47888999996321 1111112688999985 45555 4568999999999
Q ss_pred HHHHH
Q 039163 163 GQLYY 167 (551)
Q Consensus 163 ~~l~~ 167 (551)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 35
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=86.08 E-value=0.75 Score=49.23 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=24.7
Q ss_pred hhhhhhhcc-HHHHHHhHhhcCCCCCCCCCCCCC
Q 039163 507 WGNKYFKNN-FKRLVHVKTMADPHNFFRNEQSIP 539 (551)
Q Consensus 507 ~g~~yyg~n-~~RL~~IK~kyDP~nvF~~~qsI~ 539 (551)
|...+||++ ++-+++||+.+||+|+|+-..-+.
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~ 514 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGI 514 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCC
Confidence 446777765 455599999999999998655443
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=85.84 E-value=0.7 Score=46.24 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=53.2
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCC---CccccCCCEEEEEeeCC---cceEEcCCCCEEEEcCCC
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEG---LSYVSHVPFVVIDLINL---CKISVDAKQKTAWVQSGA 160 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g---~~~~~~~~gvvidl~~l---~~i~id~~~~~v~v~~G~ 160 (551)
.|--++.|+|.+|..++++ + -.-.+.+||+++.. ..... ...+||++++ +.|+.+. ++.++||+++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~--p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~v 76 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGH--PAALVDLTGIDGLATISTLA-DGSLRIGAGA 76 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCC--CSEEEECTTSTTTTCEEECT-TSCEEEETTC
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCC--CCEEEECCCChhhcceEECC-CCeEEEccCC
Confidence 4446889999999998876 2 25788999999632 11111 2688999876 6666643 3479999999
Q ss_pred CHHHHHHH
Q 039163 161 TLGQLYYR 168 (551)
Q Consensus 161 ~~~~l~~~ 168 (551)
++.++.+.
T Consensus 77 t~~~l~~~ 84 (324)
T 1rm6_B 77 TLEAIAEH 84 (324)
T ss_dssp BHHHHHHC
T ss_pred cHHHHHhC
Confidence 99999763
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=79.97 E-value=3.1 Score=45.76 Aligned_cols=29 Identities=34% Similarity=0.537 Sum_probs=23.2
Q ss_pred hhhhhhhh-ccHHHHHHhHhhcCCCCCCCC
Q 039163 506 IWGNKYFK-NNFKRLVHVKTMADPHNFFRN 534 (551)
Q Consensus 506 ~~g~~yyg-~n~~RL~~IK~kyDP~nvF~~ 534 (551)
.|-..+|| ..++.|++||+.|||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 34445555 479999999999999999974
No 38
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=68.24 E-value=3.9 Score=48.64 Aligned_cols=78 Identities=5% Similarity=0.002 Sum_probs=53.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCc-cccCCCEEEEEeeCC---cceEEcCCCCEEEEcCCCCH
Q 039163 87 KPQVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLS-YVSHVPFVVIDLINL---CKISVDAKQKTAWVQSGATL 162 (551)
Q Consensus 87 ~p~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~-~~~~~~gvvidl~~l---~~i~id~~~~~v~v~~G~~~ 162 (551)
.+.-.++|+|.+|+.++++. + -.-.+.+||++....- .......++||++++ +.|+.+ ++.++|||++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---H-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---C-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHhh---C-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 34568999999999887653 2 1347889999853111 111112578999874 556654 557999999999
Q ss_pred HHHHHHHH
Q 039163 163 GQLYYRIA 170 (551)
Q Consensus 163 ~~l~~~l~ 170 (551)
.++.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988664
No 39
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=62.18 E-value=7.4 Score=41.84 Aligned_cols=26 Identities=15% Similarity=0.109 Sum_probs=21.7
Q ss_pred ccHHHHHHhHhhcCCCCCCCCCCCCC
Q 039163 514 NNFKRLVHVKTMADPHNFFRNEQSIP 539 (551)
Q Consensus 514 ~n~~RL~~IK~kyDP~nvF~~~qsI~ 539 (551)
..++-+++||+.+||+|+|+-..-+.
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~~ 548 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSGV 548 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred HHHHHHHHHHHHcCccCCCCCCcccc
Confidence 46888999999999999998765543
No 40
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=56.87 E-value=5.8 Score=42.77 Aligned_cols=30 Identities=17% Similarity=0.085 Sum_probs=23.0
Q ss_pred hccHHHHHHhHhhcCCCCCCCCCCCCCCCCC
Q 039163 513 KNNFKRLVHVKTMADPHNFFRNEQSIPPHTS 543 (551)
Q Consensus 513 g~n~~RL~~IK~kyDP~nvF~~~qsI~~~~~ 543 (551)
++... |++||+.+||+|+|+-..-+.|..+
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~ 565 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTSKRK 565 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCCCSS
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCCccc
Confidence 34444 9999999999999988776665443
No 41
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=50.47 E-value=21 Score=38.43 Aligned_cols=25 Identities=16% Similarity=0.280 Sum_probs=18.9
Q ss_pred hhhh-ccHHHHHHhHhhcCCCCCCCC
Q 039163 510 KYFK-NNFKRLVHVKTMADPHNFFRN 534 (551)
Q Consensus 510 ~yyg-~n~~RL~~IK~kyDP~nvF~~ 534 (551)
..|| ..++=+++||+.+||+|+|+-
T Consensus 555 ~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 555 RYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp ----CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 3344 468999999999999999975
No 42
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=50.19 E-value=6.8 Score=42.16 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=20.6
Q ss_pred ccHHHHHHhHhhcCCCCCCCCC
Q 039163 514 NNFKRLVHVKTMADPHNFFRNE 535 (551)
Q Consensus 514 ~n~~RL~~IK~kyDP~nvF~~~ 535 (551)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999874
No 43
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=37.12 E-value=15 Score=39.12 Aligned_cols=23 Identities=17% Similarity=0.265 Sum_probs=21.1
Q ss_pred hccHHHHHHhHhhcCCCCCCCCC
Q 039163 513 KNNFKRLVHVKTMADPHNFFRNE 535 (551)
Q Consensus 513 g~n~~RL~~IK~kyDP~nvF~~~ 535 (551)
|+|++.-+++++++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 44
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=34.37 E-value=63 Score=26.88 Aligned_cols=42 Identities=12% Similarity=0.301 Sum_probs=35.2
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQI-RVRSGGHD 122 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 122 (551)
+|.. ...|..|+.+.+++++.++.+.|++.|++. .++-.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4743 348999999999999999999999999997 56677774
No 45
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=34.34 E-value=61 Score=27.01 Aligned_cols=42 Identities=14% Similarity=0.170 Sum_probs=34.9
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQI-RVRSGGHD 122 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 122 (551)
+|.. ...|..|+.+.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 49 ~W~~--~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWFR--EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 3643 348999999999999999999999999997 56677774
No 46
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=33.33 E-value=37 Score=40.45 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=48.7
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCC---CCccccCCCEEEEEeeCCcce-EEcCCCCEEEEcCCCCHHHH
Q 039163 90 VIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFE---GLSYVSHVPFVVIDLINLCKI-SVDAKQKTAWVQSGATLGQL 165 (551)
Q Consensus 90 ~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~---g~~~~~~~~gvvidl~~l~~i-~id~~~~~v~v~~G~~~~~l 165 (551)
..+.|.|.+|+.++...-- +. .+..|++... -.-... -.++|++.+...+ .|..++..++||+++++.++
T Consensus 242 ~w~~P~tl~el~~l~~~~p--~a--~lvaGnT~~gl~~~~~~~~--~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKHP--SA--PLVIGNTYLGLHMKFTDVS--YPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp EEEECSSHHHHHHHHHHCT--TS--CBCSSCTTHHHHHC--CCC--CSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred eEecCCCHHHHHHHHHHCC--CC--eEEEecccceeeEeecCCC--CCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 4689999999988754211 22 3456766631 111111 2588998764443 34445568999999999999
Q ss_pred HHHHHH
Q 039163 166 YYRIAE 171 (551)
Q Consensus 166 ~~~l~~ 171 (551)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 47
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=33.07 E-value=50 Score=27.68 Aligned_cols=42 Identities=12% Similarity=0.223 Sum_probs=34.8
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQI-RVRSGGHD 122 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 122 (551)
+|.. .-.+..|+.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 3743 237999999999999999999999999996 56677775
No 48
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=31.99 E-value=68 Score=26.53 Aligned_cols=42 Identities=10% Similarity=0.232 Sum_probs=34.8
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQI-RVRSGGHD 122 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 122 (551)
+|.. ...|..|+.+.+++++.++.+.|.+.|+|. .++-.|+.
T Consensus 45 ~W~~--~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWYD--EGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHHH--CCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 3642 458999999999999999999999999997 56667765
No 49
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=31.53 E-value=63 Score=26.64 Aligned_cols=42 Identities=14% Similarity=0.301 Sum_probs=33.0
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCCC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQI-RVRSGGHD 122 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh~ 122 (551)
+|.. ...|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 43 ~W~~--~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 43 EWLR--EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred HHHH--CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 3642 458999999999999999999999999986 55566654
No 50
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=28.67 E-value=41 Score=26.40 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=28.1
Q ss_pred eEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCCCCCCccccCCCEEEEEeeCCcc
Q 039163 89 QVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHDFEGLSYVSHVPFVVIDLINLCK 144 (551)
Q Consensus 89 ~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~~~g~~~~~~~~gvvidl~~l~~ 144 (551)
..++.|++-+|+++++...++.. .|+|+|++|+.
T Consensus 7 Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 7 IVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp CEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 48899999999999999887532 68899988764
No 51
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=25.62 E-value=1.1e+02 Score=25.27 Aligned_cols=41 Identities=20% Similarity=0.411 Sum_probs=33.7
Q ss_pred CcCCCCCCCceEEEecCCHHHHHHHHHHHHhcCCcE-EEEcCCC
Q 039163 79 RFSTPNTPKPQVIITPLDVSQVQAAIKCSKKQGLQI-RVRSGGH 121 (551)
Q Consensus 79 r~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~-~~~ggGh 121 (551)
+|.. ...|..++...+++++.++.+.|.+.|++. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3754 236999999999999999999999999985 5666666
No 52
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.55 E-value=89 Score=23.86 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=29.6
Q ss_pred eEEEecCCHHHHHHHHHHHHhcCCcEEEEcCCCC
Q 039163 89 QVIITPLDVSQVQAAIKCSKKQGLQIRVRSGGHD 122 (551)
Q Consensus 89 ~~vv~p~s~~dv~~~v~~a~~~~~~~~~~ggGh~ 122 (551)
.+|-...+.+|+..+|+..+.+|.|+.+.-.|.+
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 3567789999999999999999999999877765
No 53
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=20.01 E-value=62 Score=19.90 Aligned_cols=20 Identities=15% Similarity=0.265 Sum_probs=16.7
Q ss_pred hhhccHHHHHHhHhhcCCCC
Q 039163 511 YFKNNFKRLVHVKTMADPHN 530 (551)
Q Consensus 511 yyg~n~~RL~~IK~kyDP~n 530 (551)
-|.+-++|-+||..|.+++.
T Consensus 9 aFadA~~RaRQIaAKig~~~ 28 (31)
T 2kxh_B 9 AFKDALQRARQIAAKIGGDA 28 (31)
T ss_dssp HHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 35678999999999998865
Done!