BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039166
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2
SV=1
Length = 775
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 112/196 (57%), Gaps = 11/196 (5%)
Query: 1 MMTTTDIVNLEGKPIIDERLLPADIFAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCGLN 60
+MTT D+ + +GK I D PA +FAIGAGHVNP +A +PGLV++IQP DYI YLC L
Sbjct: 581 LMTTADLYDRQGKAIKDGNK-PAGVFAIGAGHVNPQKAINPGLVYNIQPVDYITYLCTLG 639
Query: 61 YTDREIAILVQRKVKCSEISSIKEA-QLNYPSFSLTLGSGAQT--YTRTVTNVGQPNSLY 117
+T +I + + V C+ I LNYPS ++ G T TR VTNVG PNS+Y
Sbjct: 640 FTRSDILAITHKNVSCNGILRKNPGFSLNYPSIAVIFKRGKTTEMITRRVTNVGSPNSIY 699
Query: 118 KSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTF--KRTSYGGNRQDMPFAQGYIKWSSD 175
+ P+G++V V P L F +Q S+ V F K+ + GG + FAQG + W +
Sbjct: 700 SVNVKAPEGIKVIVNPKRLVFKHVDQTLSYRVWFVLKKKNRGG--KVASFAQGQLTWVNS 757
Query: 176 QH---SVRIPLVVIFE 188
+ VR P+ V +
Sbjct: 758 HNLMQRVRSPISVTLK 773
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1
Length = 757
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 5/189 (2%)
Query: 1 MMTTTDIVNLEGKPIID-ERLLPADIFAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCGL 59
+MTT +GKP++D P+ F GAGHV+P+ A +PGL++D+ +DY+ +LC L
Sbjct: 571 LMTTAYKTYKDGKPLLDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCAL 630
Query: 60 NYTDREIAILVQRKVKCSEISSIKEAQLNYPSFSLTL-GSGAQTYTRTVTNVGQPNSLYK 118
NYT +I + +R C S A LNYPSF++ + G GA YTRTVT+VG +
Sbjct: 631 NYTSPQIRSVSRRNYTCDPSKSYSVADLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSV 690
Query: 119 SLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFKRTSYGGNRQDMPFAQGYIKWSSDQHS 178
+ GV++ V P+ L F EAN+K S+ VTF S ++ + G I+WS +H
Sbjct: 691 KVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDS---SKPSGSNSFGSIEWSDGKHV 747
Query: 179 VRIPLVVIF 187
V P+ + +
Sbjct: 748 VGSPVAISW 756
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1
Length = 749
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 94/168 (55%), Gaps = 14/168 (8%)
Query: 26 FAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCGLNYTDREIAILV-QRKVKCSEI-SSIK 83
FA G G +NP RA PGLV+D+ Y+ +LCG Y +A LV R V CS I +
Sbjct: 582 FAYGGGQINPRRAASPGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLG 641
Query: 84 EAQLNYPSFSLTLGSGAQT----YTRTVTNVGQPNSLYKSLIFVPQGVEVEVTPSTLQFN 139
LNYP+ LTL S + + R VTNVG P+S+Y + + P+GVE+ V P +L F+
Sbjct: 642 HDSLNYPTIQLTLRSAKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFS 701
Query: 140 EANQKASFAVTFKRTSYGGNRQDMP--FAQGYIKWSSDQHSVRIPLVV 185
+A+QK SF V K +Q P G + W S +HSVR P+V+
Sbjct: 702 KASQKRSFKVVVK------AKQMTPGKIVSGLLVWKSPRHSVRSPIVI 743
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1
Length = 731
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 16 IDERLLPADIFAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCGLNYTDREIAILVQRKVK 75
++ R P FA G+GHVNP +A PGLV+D DY+ +LCG Y + + +
Sbjct: 561 MNARFNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSA 620
Query: 76 CSEISSIKEAQLNYPSFSLTLGSGAQT----YTRTVTNVGQPNSLYKSLIFVPQGVEVEV 131
C+ ++ + LNYPSF L++ S +QT + RT+T+V S Y+++I PQG+ + V
Sbjct: 621 CTSGNTGRVWDLNYPSFGLSV-SPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISV 679
Query: 132 TPSTLQFNEANQKASFAVTFKRTSYGGNRQDMPFAQGYIKWSSDQHSVRIPLVV 185
P+ L FN + SF +T + + G + WS H VR P+ +
Sbjct: 680 NPNVLSFNGLGDRKSFTLTVRGSIKGF------VVSASLVWSDGVHYVRSPITI 727
>sp|Q5SRN2|CF010_HUMAN Uncharacterized protein C6orf10 OS=Homo sapiens GN=C6orf10 PE=2
SV=3
Length = 563
Score = 34.3 bits (77), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 83 KEAQLNYPSFSLTLGSGAQTYTRTVTNV--GQPNSLYKSLIFVPQGVEVEVTPSTL 136
+E QL S+ G GAQ ++V++V GQ + + KS VP+G E +VT S L
Sbjct: 304 QETQLKISEMSIPQGQGAQ-IKKSVSDVPRGQESQVKKSESGVPKGQEAQVTKSGL 358
>sp|Q8U260|SYFB_PYRFU Phenylalanine--tRNA ligase beta subunit OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pheT
PE=3 SV=1
Length = 556
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 51 DYIPYLCGLNYTDREIAILVQRKVKCSEISSIKEAQLNYPSF 92
+YI L GL ++ EI L++R + EI S +A++ YP+F
Sbjct: 288 EYIRKLSGLELSNEEIKELLERMMYEVEILSENKAKVKYPAF 329
>sp|Q73D01|MURQ_BACC1 N-acetylmuramic acid 6-phosphate etherase OS=Bacillus cereus
(strain ATCC 10987) GN=murQ PE=3 SV=1
Length = 294
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 52/193 (26%)
Query: 18 ERLLPADIFAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCG-LNYTDREIAILVQRKVKC 76
E L D+ +IG N+ V I PY+ G L Y +R A
Sbjct: 116 EELADEDLKSIGL--------NEKDTVIGIAASGRTPYVIGGLKYANRVGA-------ST 160
Query: 77 SEISSIKEAQLN-YPSFSLTLGSGAQTYT-----------RTVTNVGQPNSL------YK 118
+ IS K A+++ Y ++ +G+GA+ T + V N+ S+ YK
Sbjct: 161 ASISCNKNAEISKYAKINVEVGTGAEILTGSTRLKAGTAQKLVLNMISTASMIGVGKVYK 220
Query: 119 SLIFVPQ------------------GVEVEVTPSTLQFNEANQKASFAVTFKRTSYGGNR 160
+L+ Q GV EV + E N KA+ + + YG
Sbjct: 221 NLMVDVQSTNEKLVERSKRIIVEATGVSYEVAAEYYEKAERNVKAAIVMVLLQCEYGEAL 280
Query: 161 QDMPFAQGYIKWS 173
Q + A+G++K +
Sbjct: 281 QKLKEAKGFVKKA 293
>sp|Q6HMZ5|MURQ_BACHK N-acetylmuramic acid 6-phosphate etherase OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=murQ PE=3 SV=1
Length = 294
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 87 LNYPSFSLTLGSGAQTYTRTVTNVGQPNSLY----KSLIFVPQGVEVEVTPSTLQFNEAN 142
LN S + +G G + Y + +V N K +I GV EV + E N
Sbjct: 204 LNMISTASMIGVG-KVYKNLMVDVQSTNEKLVERSKRIIVEATGVSYEVAAEHYEKAERN 262
Query: 143 QKASFAVTFKRTSYGGNRQDMPFAQGYIKWS 173
KA+ + + YG + + A+G++K +
Sbjct: 263 VKAAIVMVLLQCEYGEALEKLKVAKGFVKKA 293
>sp|Q63FJ0|MURQ_BACCZ N-acetylmuramic acid 6-phosphate etherase OS=Bacillus cereus
(strain ZK / E33L) GN=murQ PE=3 SV=1
Length = 294
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 87 LNYPSFSLTLGSGAQTYTRTVTNVGQPNSLY----KSLIFVPQGVEVEVTPSTLQFNEAN 142
LN S + +G G + Y + +V N K +I GV EV + E N
Sbjct: 204 LNMISTASMIGVG-KVYKNLMVDVQSTNEKLVERSKRIIVEATGVSYEVAAEHYEKAERN 262
Query: 143 QKASFAVTFKRTSYGGNRQDMPFAQGYIKWS 173
KA+ + + YG + + A+G++K +
Sbjct: 263 VKAAIVMVLLQCEYGEALEKLKVAKGFVKKA 293
>sp|O23787|THI4_CITSI Thiamine thiazole synthase, chloroplastic OS=Citrus sinensis
GN=THI1 PE=2 SV=1
Length = 356
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 8 VNLEGKPIIDERLLPADIFAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCGLNYTDREIA 67
+N + + +D ++ A + GH P A + I + +P + L+ E A
Sbjct: 216 MNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDA 275
Query: 68 ILVQRK-------VKCSEISSIKEAQLNYPSFSLTLGSGAQTYTRTVTNVGQPNSL 116
I+ + V E++ I A P+F + SG + + ++GQPN+L
Sbjct: 276 IVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNAL 331
>sp|B7II82|MURQ_BACC2 N-acetylmuramic acid 6-phosphate etherase OS=Bacillus cereus
(strain G9842) GN=murQ PE=3 SV=1
Length = 294
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 87 LNYPSFSLTLGSGAQTYTRTVTNVGQPNSLY----KSLIFVPQGVEVEVTPSTLQFNEAN 142
LN S + +G G + Y + +V N K +I G EV + E N
Sbjct: 204 LNMISTASMIGVG-KVYKNLMVDVQSTNEKLVERSKRIIMEATGASYEVAAEYYEKAERN 262
Query: 143 QKASFAVTFKRTSYGGNRQDMPFAQGYIKWS 173
KA+ + + YG + + +A+G++K +
Sbjct: 263 VKAAIVMVLLQCEYGEALEKLKYAKGFVKKA 293
>sp|F6H7K5|THI42_VITVI Thiamine thiazole synthase 2, chloroplastic OS=Vitis vinifera
GN=THI1-2 PE=3 SV=1
Length = 355
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 8 VNLEGKPIIDERLLPADIFAIGAGHVNPSRANDPGLVFDIQPDDYIPYLCGLNYTDREIA 67
+N + + +D ++ A + GH P A + I D +P + L+ E A
Sbjct: 213 MNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDA 272
Query: 68 ILVQRK-------VKCSEISSIKEAQLNYPSFSLTLGSGAQTYTRTVTNVGQPNSL 116
I+ + V E++ I A P+F + SG + + +GQPN++
Sbjct: 273 IVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRALGQPNAI 328
>sp|Q81HH1|MURQ_BACCR N-acetylmuramic acid 6-phosphate etherase OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=murQ PE=3 SV=1
Length = 294
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 87 LNYPSFSLTLGSGAQTYTRTVTNVGQPNSLY----KSLIFVPQGVEVEVTPSTLQFNEAN 142
LN S + +G G + Y + +V N K +I G EV + E N
Sbjct: 204 LNMISTASMIGVG-KVYKNLMVDVQSTNEKLVERSKRIIVEATGASYEVAAEYYEKAERN 262
Query: 143 QKASFAVTFKRTSYGGNRQDMPFAQGYIKWS 173
KA+ + + YG + + +A+G++K +
Sbjct: 263 VKAAIVMVLLQCEYGEALEKLKYAKGFVKKA 293
>sp|P08953|TOLL_DROME Protein toll OS=Drosophila melanogaster GN=Tl PE=1 SV=1
Length = 1097
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 33 VNPSRANDPGLVFDIQPDDYIPYLCGLNYTDREIAILVQRKVKCSEISSIKEAQLNYPSF 92
+ P+ A +P IQP DY+ +C N TD + +K++ E+ ++ + P
Sbjct: 55 ICPANAENPTFRLTIQPKDYVQIMC--NLTDTTDYQQLPKKLRIGEVDRVQMRRCMLPGH 112
Query: 93 S 93
+
Sbjct: 113 T 113
>sp|Q7V9I2|GCST_PROMA Aminomethyltransferase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=gcvT PE=3 SV=1
Length = 373
Score = 30.4 bits (67), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 7 IVNLEGKPIID--ERLLPADIFAIGAGHVNPS--RANDPGLVFDIQPDDYIPYLCGLNYT 62
+ +++GK D + L+P+D+ IG G + ND G++ DD I Y G N
Sbjct: 55 VFSIQGKNPKDALQTLVPSDLHRIGPGEACYTVLLNNDGGII-----DDLIVYDLGTNDP 109
Query: 63 DREIAILVQRKVKC--SEISSIKEAQLNYPSFSL--TLGSGAQTYTRTVTNVGQ-PNSLY 117
+ E IL+ C ++I IKE L+ + + G G + + Q N L
Sbjct: 110 NNEECILIVINAGCTQADIDWIKE-HLSDKNLKVCNAKGDGVLLALQGPDSTNQLRNVLG 168
Query: 118 KSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFKRTSYGG 158
+SL +P+ E+ Q SF++ RT Y G
Sbjct: 169 ESLTNIPKFGHREI-----QVQLKTHPVSFSIFIARTGYTG 204
>sp|B7HER4|MURQ_BACC4 N-acetylmuramic acid 6-phosphate etherase OS=Bacillus cereus
(strain B4264) GN=murQ PE=3 SV=1
Length = 294
Score = 30.4 bits (67), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 87 LNYPSFSLTLGSGAQTYTRTVTNVGQPNSLY----KSLIFVPQGVEVEVTPSTLQFNEAN 142
LN S + +G G + Y + +V N K +I G EV + E N
Sbjct: 204 LNMISTASMIGVG-KVYKNLMVDVQSTNEKLVERSKRIIVEATGASYEVATEYYEKAERN 262
Query: 143 QKASFAVTFKRTSYGGNRQDMPFAQGYIKWS 173
KA+ + + YG + + +A+G++K +
Sbjct: 263 VKAAIVMVLLQCEYGEALEKLKYAKGFVKKA 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,054,121
Number of Sequences: 539616
Number of extensions: 2818301
Number of successful extensions: 5650
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5636
Number of HSP's gapped (non-prelim): 21
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)