Query 039166
Match_columns 188
No_of_seqs 160 out of 895
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 11:30:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039166.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039166hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1w8oa1 b.1.18.2 (A:403-505) S 94.7 0.24 1.7E-05 34.0 10.7 84 87-179 6-91 (103)
2 d1m1sa_ b.1.11.2 (A:) WR4 {Nem 70.2 11 0.00079 25.3 7.7 46 104-152 21-66 (109)
3 d1vqoe1 d.141.1.1 (E:1-79) Rib 59.7 10 0.00075 23.9 5.5 31 119-149 3-33 (79)
4 d1grwa_ b.1.11.2 (A:) Major sp 54.8 20 0.0014 24.4 6.8 49 101-152 25-73 (124)
5 d2cqla1 d.141.1.1 (A:1-87) Rib 45.7 16 0.0012 23.3 4.7 30 120-149 9-38 (87)
6 d1r7aa1 b.71.1.1 (A:435-504) S 44.7 16 0.0011 22.6 4.2 40 135-178 15-58 (70)
7 d1rl6a1 d.141.1.1 (A:7-81) Rib 43.6 20 0.0014 22.3 4.8 28 121-148 2-29 (75)
8 d1wica_ b.1.11.2 (A:) MSP doma 41.7 36 0.0026 23.8 6.6 45 105-152 41-85 (152)
9 d1m1sa_ b.1.11.2 (A:) WR4 {Nem 39.6 16 0.0011 24.4 4.0 22 129-152 4-25 (109)
10 d1rowa_ b.1.11.2 (A:) SSP-19 { 35.0 56 0.0041 21.5 8.7 47 103-152 17-63 (107)
11 d1tyeb1 b.1.15.1 (B:58-106,B:3 34.5 10 0.00076 26.6 2.4 25 128-152 23-48 (135)
12 d2j01h1 d.141.1.1 (H:12-82) Ri 33.7 8.7 0.00064 23.8 1.7 24 124-147 1-24 (71)
13 d1vcaa2 b.1.1.4 (A:1-90) Vascu 33.2 46 0.0034 20.0 5.5 26 127-152 1-26 (90)
14 d1r6va_ c.41.1.1 (A:) Fervidol 29.7 1.8 0.00013 38.2 -3.2 23 25-47 423-445 (671)
15 d1exha_ b.2.2.1 (A:) Exo-1,4-b 26.9 35 0.0025 22.7 4.1 29 101-129 21-50 (110)
16 d1rowa_ b.1.11.2 (A:) SSP-19 { 26.4 24 0.0017 23.5 3.1 20 129-148 1-20 (107)
17 d1epfa1 b.1.1.4 (A:1-97) Neura 24.2 28 0.002 21.4 3.0 25 127-152 1-25 (97)
18 d2cj3a1 b.6.1.1 (A:1-105) Plas 22.8 30 0.0022 21.8 3.0 32 115-148 1-32 (105)
19 d2fcba1 b.1.1.4 (A:6-90) Fc ga 22.3 33 0.0024 20.7 3.0 29 123-152 1-29 (85)
20 d3bwuc1 b.1.11.1 (C:1-121) Per 20.8 1.1E+02 0.0079 20.1 6.0 25 127-152 46-70 (121)
No 1
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]}
Probab=94.71 E-value=0.24 Score=33.98 Aligned_cols=84 Identities=13% Similarity=0.014 Sum_probs=55.5
Q ss_pred cCccceEEeecCccEEEEEEEEeecCCCc-eEEEEEECCCCeEEEEEcCEEEEeeCCeEEEEEEEEE-eccCCCCCCCCC
Q 039166 87 LNYPSFSLTLGSGAQTYTRTVTNVGQPNS-LYKSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFK-RTSYGGNRQDMP 164 (188)
Q Consensus 87 LNyPSi~v~~~~~~~tv~RTVTNVg~~~~-tY~a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~Vt~~-~~~~~~~~~~~~ 164 (188)
|.-|++++.- ....+++=+|+|-|.... .-++.+..|+|-.++. ....+.+ ||+++++++++ .... ..+.
T Consensus 6 ~t~p~~~v~p-G~~~~~~vtVtN~g~~~~~~~~~~~~~P~GW~v~~--~~~~L~p-G~s~~~~~~Vt~p~~a----~~G~ 77 (103)
T d1w8oa1 6 FTIPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMP-GRQAKGQVTITVPAGT----TPGR 77 (103)
T ss_dssp EECCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCT-TCEEEEEEEEECCTTC----CCEE
T ss_pred ccCcceeeCC-CCeEEEEEEEEeCCCCceeeeeEEEcCCCCccccC--cceeeCC-CCcEEEEEEEECCCCC----CCce
Confidence 4456665532 346789999999997654 3567788999998754 4455665 99999999999 4332 2445
Q ss_pred eEEEEEEEEcCCceE
Q 039166 165 FAQGYIKWSSDQHSV 179 (188)
Q Consensus 165 ~~fG~l~Wsd~~h~V 179 (188)
|.. .++.+++.+..
T Consensus 78 Y~i-~~~a~~~~~~~ 91 (103)
T d1w8oa1 78 YRV-GATLRTSAGNA 91 (103)
T ss_dssp EEE-EEEEEETTEEE
T ss_pred EEE-EEEEEeCCcce
Confidence 544 34555444433
No 2
>d1m1sa_ b.1.11.2 (A:) WR4 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=70.18 E-value=11 Score=25.29 Aligned_cols=46 Identities=13% Similarity=0.085 Sum_probs=38.1
Q ss_pred EEEEEeecCCCceEEEEEECCCCeEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 104 TRTVTNVGQPNSLYKSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 104 ~RTVTNVg~~~~tY~a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
+=+++|.+...-.|++....|.-+. |.|..=...+ |++...+|+..
T Consensus 21 ~~~l~N~s~~~vafKiktt~~~~y~--V~P~~G~I~P-~~~~~i~I~~~ 66 (109)
T d1m1sa_ 21 THNITSESDSRLAFKVKSSNNEHYR--VRPVYGFVDA-KGKSKLDINRL 66 (109)
T ss_dssp EEEEEECSSSEEEEEEEESCTTTEE--EECSEEEECT-TCEEEEEEEEC
T ss_pred EEEEECCCCCcEEEEEEcCCCCeEE--EeCCeeEECC-CCeEEEEEEeC
Confidence 3489999988889999998887766 5788888877 99988888876
No 3
>d1vqoe1 d.141.1.1 (E:1-79) Ribosomal protein L6 {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=59.71 E-value=10 Score=23.85 Aligned_cols=31 Identities=13% Similarity=0.194 Sum_probs=25.2
Q ss_pred EEEECCCCeEEEEEcCEEEEeeCCeEEEEEE
Q 039166 119 SLIFVPQGVEVEVTPSTLQFNEANQKASFAV 149 (188)
Q Consensus 119 a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~V 149 (188)
..+.-|+||+|++.-..|+++....+++..+
T Consensus 3 ~~I~IP~~V~v~i~~~~i~vkGp~G~L~~~~ 33 (79)
T d1vqoe1 3 VELEIPEDVDAEQDHLDITVEGDNGSVTRRL 33 (79)
T ss_dssp EEEECCSSCEEEEETTEEEEEETTEEEEEEC
T ss_pred ceeECCCCcEEEEeCCEEEEEcCCeEEEEEc
Confidence 4678899999999999999987766665543
No 4
>d1grwa_ b.1.11.2 (A:) Major sperm protein, MSP {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=54.83 E-value=20 Score=24.41 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=39.4
Q ss_pred EEEEEEEEeecCCCceEEEEEECCCCeEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 101 QTYTRTVTNVGQPNSLYKSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 101 ~tv~RTVTNVg~~~~tY~a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
.+-.=+++|.++..-.|++....|.-+. |.|..=.+.+ ||+..++|++.
T Consensus 25 ~~~~l~l~N~s~~~vafKvktt~p~~y~--v~P~~G~i~p-~~~~~i~V~~~ 73 (124)
T d1grwa_ 25 HTYHIKVINSSARRIGYGIKTTNMKRLG--VDPPCGVLDP-KEAVLLAVSCD 73 (124)
T ss_dssp EEEEEEEEECSSSCEEEEEEESCTTTEE--EESSEEEECT-TCEEEEEEEEC
T ss_pred EEEEEEEECCCCCeEEEEEEeCCCceEE--EECCCCEECC-CCEEEEEEEEe
Confidence 3444578999988889999999997665 5788777776 99999888886
No 5
>d2cqla1 d.141.1.1 (A:1-87) Ribosomal protein L6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.68 E-value=16 Score=23.25 Aligned_cols=30 Identities=10% Similarity=0.187 Sum_probs=24.4
Q ss_pred EEECCCCeEEEEEcCEEEEeeCCeEEEEEE
Q 039166 120 LIFVPQGVEVEVTPSTLQFNEANQKASFAV 149 (188)
Q Consensus 120 ~v~~p~gv~V~V~P~~l~f~~~ge~~sf~V 149 (188)
.+.-|+||+|++.-..++++....+++..+
T Consensus 9 ~I~IP~gV~v~i~~~~i~vkGpkG~L~~~~ 38 (87)
T d2cqla1 9 TVDIPENVDITLKGRTVIVKGPRGTLRRDF 38 (87)
T ss_dssp EECCCSSCEEEEETTEEEEEETTEEEEEEC
T ss_pred cEECCCCCEEEEeCCEEEEEcCCcEEEEEe
Confidence 366899999999999999997766666544
No 6
>d1r7aa1 b.71.1.1 (A:435-504) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]}
Probab=44.73 E-value=16 Score=22.57 Aligned_cols=40 Identities=18% Similarity=0.360 Sum_probs=25.8
Q ss_pred EEEEeeCCeEEEEEEEEE--eccCCCCCCCCCeEEEEEEEEcC--Cce
Q 039166 135 TLQFNEANQKASFAVTFK--RTSYGGNRQDMPFAQGYIKWSSD--QHS 178 (188)
Q Consensus 135 ~l~f~~~ge~~sf~Vt~~--~~~~~~~~~~~~~~fG~l~Wsd~--~h~ 178 (188)
+++|+=.|+.-+-++||+ ++.. ..+...-.+|.|+|+ .|+
T Consensus 15 SI~F~W~g~~s~AtLTFeP~~GlG----v~Nt~~VA~L~W~D~aG~H~ 58 (70)
T d1r7aa1 15 SISFTWRGETSQATLTFEPKRGLG----VDNTTPVAMLEWEDSAGDHR 58 (70)
T ss_dssp EEEEEEECSSCEEEEEECGGGSCS----TTCCSCCEEEEEEETTEEEE
T ss_pred EEEEEEecccceEEEEEcCCcccc----ccCCceeeEEEEeccCCCcc
Confidence 455665677777788888 3331 234556789999985 454
No 7
>d1rl6a1 d.141.1.1 (A:7-81) Ribosomal protein L6 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=43.59 E-value=20 Score=22.27 Aligned_cols=28 Identities=25% Similarity=0.363 Sum_probs=21.2
Q ss_pred EECCCCeEEEEEcCEEEEeeCCeEEEEE
Q 039166 121 IFVPQGVEVEVTPSTLQFNEANQKASFA 148 (188)
Q Consensus 121 v~~p~gv~V~V~P~~l~f~~~ge~~sf~ 148 (188)
+.-|+|++|++.=..++++....++++.
T Consensus 2 I~IP~gV~v~i~~~~i~vkGpkG~L~~~ 29 (75)
T d1rl6a1 2 IEIPAGVTVTVNGNTVTVKGPKGELTRT 29 (75)
T ss_dssp EECCTTCEEEEETTEEEEEETTEEEEEE
T ss_pred cCCCCCcEEEEECCEEEEEeCCEEEEEe
Confidence 4568899999998898888766555554
No 8
>d1wica_ b.1.11.2 (A:) MSP domain containing protein 2, Mospd2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.71 E-value=36 Score=23.78 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=37.9
Q ss_pred EEEEeecCCCceEEEEEECCCCeEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 105 RTVTNVGQPNSLYKSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 105 RTVTNVg~~~~tY~a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
=+++|.....-.|++....|.-+.| .|..=.+.+ |++..+.|++.
T Consensus 41 l~l~N~s~~~vaFKiktt~p~~y~V--~P~~G~i~p-~~~~~I~v~~~ 85 (152)
T d1wica_ 41 IVLTNVTKNIVAFKVRTTAPEKYRV--KPSNSSCDP-GASIDIIVSPH 85 (152)
T ss_dssp EEEEBCSSSCEEEEEEESCTTTEEE--ESSEEEECT-TCEEEEEEEEC
T ss_pred EEEECCCCCeEEEEEEcCCCccEEE--ECCceEECC-CCEEEEEEEEC
Confidence 4789999888899999999988774 699888877 99888888776
No 9
>d1m1sa_ b.1.11.2 (A:) WR4 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=39.56 E-value=16 Score=24.41 Aligned_cols=22 Identities=14% Similarity=0.326 Sum_probs=16.4
Q ss_pred EEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 129 VEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 129 V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
++|.|..|.|...+.+.. +++.
T Consensus 4 L~i~P~~l~F~~~~g~~~--~~l~ 25 (109)
T d1m1sa_ 4 INVDPPTGNYPATGGNST--HNIT 25 (109)
T ss_dssp EEEESSEEEECTTCEEEE--EEEE
T ss_pred EEEeCCEEEeecCCCcEE--EEEE
Confidence 689999999987766543 4554
No 10
>d1rowa_ b.1.11.2 (A:) SSP-19 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=35.02 E-value=56 Score=21.46 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=38.7
Q ss_pred EEEEEEeecCCCceEEEEEECCCCeEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 103 YTRTVTNVGQPNSLYKSLIFVPQGVEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 103 v~RTVTNVg~~~~tY~a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
.+=+++|.++..-.|++....|.-+. |.|..=...+ |++..+.|+..
T Consensus 17 ~~~~l~N~s~~~vafKvKtt~~~~y~--V~P~~G~i~P-~~~~~I~I~~~ 63 (107)
T d1rowa_ 17 STHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFVDP-SGSKDVVITRT 63 (107)
T ss_dssp EEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEECT-TEEEEEEEEEC
T ss_pred EEEEEEcCCCCeEEEEEEcCCCCeEE--EECCEEEECC-CCEEEEEEEeC
Confidence 35679999988889999999987765 5788888877 99888888765
No 11
>d1tyeb1 b.1.15.1 (B:58-106,B:355-440) Hybrid domain of integrin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.45 E-value=10 Score=26.58 Aligned_cols=25 Identities=12% Similarity=0.476 Sum_probs=18.6
Q ss_pred EEEEEcCEEEEe-eCCeEEEEEEEEE
Q 039166 128 EVEVTPSTLQFN-EANQKASFAVTFK 152 (188)
Q Consensus 128 ~V~V~P~~l~f~-~~ge~~sf~Vt~~ 152 (188)
.|.|+|..+.++ +.||.++|.|+|+
T Consensus 23 ~vQi~PQ~i~L~LRpG~~~~f~l~~r 48 (135)
T d1tyeb1 23 VTQVSPQRIALRLRPDDSKNFSIQVR 48 (135)
T ss_dssp CCCBSCSEEEEEECTTCEEEEEEEEE
T ss_pred eEEEeceEEEEEeCCCCcEEEEEEEE
Confidence 567777766654 3489999999887
No 12
>d2j01h1 d.141.1.1 (H:12-82) Ribosomal protein L6 {Thermus thermophilus [TaxId: 274]}
Probab=33.72 E-value=8.7 Score=23.76 Aligned_cols=24 Identities=29% Similarity=0.583 Sum_probs=18.7
Q ss_pred CCCeEEEEEcCEEEEeeCCeEEEE
Q 039166 124 PQGVEVEVTPSTLQFNEANQKASF 147 (188)
Q Consensus 124 p~gv~V~V~P~~l~f~~~ge~~sf 147 (188)
|+||+|++....++++....++++
T Consensus 1 P~gV~v~i~~~~v~vkGpkG~l~~ 24 (71)
T d2j01h1 1 PKGVSVEVAPGRVKVKGPKGELEV 24 (71)
T ss_dssp CTTCEEEECSSCEEEECSSCCEEC
T ss_pred CCceEEEEECCEEEEECCCEEEEE
Confidence 789999999999999865444444
No 13
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.24 E-value=46 Score=19.97 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=19.7
Q ss_pred eEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 127 VEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 127 v~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
++|++.|..-.....|+...|.-.+.
T Consensus 1 f~i~i~P~~~~~~~~G~~v~l~C~~~ 26 (90)
T d1vcaa2 1 FKIETTPESRYLAQIGDSVSLTCSTT 26 (90)
T ss_dssp CEEEEESSSEEEEETTSCEEEEEEEE
T ss_pred CEEEEECCCcEEEECCCEEEEEEecc
Confidence 46788887655555699999888887
No 14
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]}
Probab=29.65 E-value=1.8 Score=38.18 Aligned_cols=23 Identities=22% Similarity=-0.003 Sum_probs=17.7
Q ss_pred ccccCccccCCCCCCCCCeeecC
Q 039166 25 IFAIGAGHVNPSRANDPGLVFDI 47 (188)
Q Consensus 25 pFd~GAG~vnp~~A~dPGLVyD~ 47 (188)
...||.|.||+.+|+...|..+.
T Consensus 423 ~~~~G~G~vna~~Av~~~~~~~~ 445 (671)
T d1r6va_ 423 DHDTGYGLVKLDAALQGPLPTQG 445 (671)
T ss_dssp BTTTBTCBCCHHHHHHCCCCSSS
T ss_pred CCCcccChhCHHHHhhCcCCCCC
Confidence 36799999999999876554443
No 15
>d1exha_ b.2.2.1 (A:) Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD {Cellulomonas fimi [TaxId: 1708]}
Probab=26.93 E-value=35 Score=22.71 Aligned_cols=29 Identities=24% Similarity=0.223 Sum_probs=22.0
Q ss_pred EEEEEEEEeecCCC-ceEEEEEECCCCeEE
Q 039166 101 QTYTRTVTNVGQPN-SLYKSLIFVPQGVEV 129 (188)
Q Consensus 101 ~tv~RTVTNVg~~~-~tY~a~v~~p~gv~V 129 (188)
.+-.=+|||.++.. .-|++++.-|.|.+|
T Consensus 21 f~~~vtVtN~~~~~~~gW~v~~~~p~g~~i 50 (110)
T d1exha_ 21 FTANVTVKNTSSAPVDGWTLTFSFPSGQQV 50 (110)
T ss_dssp EEEEEEEEECSSSCEESEEEEEECSSCCEE
T ss_pred cEEEEEEEeCCCCcccCcEEEEECCCCCEE
Confidence 44556899998754 469999999887665
No 16
>d1rowa_ b.1.11.2 (A:) SSP-19 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=26.45 E-value=24 Score=23.50 Aligned_cols=20 Identities=10% Similarity=0.195 Sum_probs=15.0
Q ss_pred EEEEcCEEEEeeCCeEEEEE
Q 039166 129 VEVTPSTLQFNEANQKASFA 148 (188)
Q Consensus 129 V~V~P~~l~f~~~ge~~sf~ 148 (188)
+++.|..+.|...|.+..++
T Consensus 1 l~~dP~~~~f~~~~g~~~~~ 20 (107)
T d1rowa_ 1 LTADPPACTVPAAGVSSTHK 20 (107)
T ss_dssp CEEESSSEEEETTCEEEEEE
T ss_pred CeeCCCcceeeCCCCeEEEE
Confidence 46889999998877766443
No 17
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.20 E-value=28 Score=21.40 Aligned_cols=25 Identities=16% Similarity=0.325 Sum_probs=20.5
Q ss_pred eEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 127 VEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 127 v~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
+.|++.|+..+... |+...|+-.+.
T Consensus 1 l~V~i~P~~~~v~~-G~~~~l~C~v~ 25 (97)
T d1epfa1 1 LQVDIVPSQGEISV-GESKFFLCQVA 25 (97)
T ss_dssp CCEEEESSSEEEET-TCCEEEEEEEC
T ss_pred CEEEEECCCEEEcc-CCcEEEEEEEE
Confidence 46888999988865 99999888776
No 18
>d2cj3a1 b.6.1.1 (A:1-105) Plastocyanin {Anabaena variabilis [TaxId: 1172]}
Probab=22.80 E-value=30 Score=21.85 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=20.5
Q ss_pred ceEEEEEECCCCeEEEEEcCEEEEeeCCeEEEEE
Q 039166 115 SLYKSLIFVPQGVEVEVTPSTLQFNEANQKASFA 148 (188)
Q Consensus 115 ~tY~a~v~~p~gv~V~V~P~~l~f~~~ge~~sf~ 148 (188)
+||++.+..-.| ...-.|+.|+.+. |++..|.
T Consensus 1 eT~tV~v~~~~g-~~~F~P~~i~v~~-GdtV~f~ 32 (105)
T d2cj3a1 1 ETYTVKLGSDKG-LLVFEPAKLTIKP-GDTVEFL 32 (105)
T ss_dssp CEEEEEESCTTC-CSSEESSEEEECT-TCEEEEE
T ss_pred CcEEEEEEeCCC-ceEEeCCEEEECC-CCEEEEE
Confidence 367777653333 2345799999876 9976663
No 19
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32) {Human (Homo sapiens), IIb [TaxId: 9606]}
Probab=22.33 E-value=33 Score=20.67 Aligned_cols=29 Identities=7% Similarity=0.194 Sum_probs=21.5
Q ss_pred CCCCeEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 123 VPQGVEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 123 ~p~gv~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
+|+-..|++.|....... ||+..|+-.+.
T Consensus 1 aPpkp~i~~~P~~~~v~~-G~~v~L~C~~~ 29 (85)
T d2fcba1 1 APPKAVLKLEPQWINVLQ-EDSVTLTCRGT 29 (85)
T ss_dssp CCCBCEEEEESCCSEEET-TCEEEEEEECS
T ss_pred CCCCCEEEECCCCeEEcC-CCeEEEEEEEe
Confidence 466677899998777766 99877766554
No 20
>d3bwuc1 b.1.11.1 (C:1-121) Periplasmic chaperone FimC {Escherichia coli [TaxId: 562]}
Probab=20.84 E-value=1.1e+02 Score=20.06 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=20.7
Q ss_pred eEEEEEcCEEEEeeCCeEEEEEEEEE
Q 039166 127 VEVEVTPSTLQFNEANQKASFAVTFK 152 (188)
Q Consensus 127 v~V~V~P~~l~f~~~ge~~sf~Vt~~ 152 (188)
...-|+|..+.+.+ |+++.+.|...
T Consensus 46 ~~fivtPPl~rl~p-~~~q~vRI~~~ 70 (121)
T d3bwuc1 46 GRFIVTPPLFAMKG-KKENTLRILDA 70 (121)
T ss_dssp SSEEEESSEEEEES-SEEEEEEEEEC
T ss_pred CCeeECCCcEEeCC-CCeeEEEEEec
Confidence 34678999999988 99999888764
Done!