BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039168
(536 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 162/286 (56%), Gaps = 5/286 (1%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLK-EFKNEVNLIAKLQHK 272
A+++FS++N LG+GGFG VYKG LADG +AVKRL QG + +F+ EV +I+ H+
Sbjct: 36 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHR 95
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ-LDWKRRLSIINGIARGILYL 331
NL+R +Y YM N S+ L + S LDW +R I G ARG+ YL
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 155
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H+ KIIHRD+KA+N+LLD++ + DFG A++ + GT G++APEY
Sbjct: 156 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV-XXAVRGTIGHIAPEY 214
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRK--NNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
G S K+DVF +GV+LLE+I+G++ + ++ LL + L E L+D
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 274
Query: 450 PVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMT 495
L+ + +E+ + I + LLC Q P +RP MS VV ML D +
Sbjct: 275 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 162/286 (56%), Gaps = 5/286 (1%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLK-EFKNEVNLIAKLQHK 272
A+++F ++N LG+GGFG VYKG LADG +AVKRL QG + +F+ EV +I+ H+
Sbjct: 28 ASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHR 87
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ-LDWKRRLSIINGIARGILYL 331
NL+R +Y YM N S+ L + S LDW +R I G ARG+ YL
Sbjct: 88 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 147
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H+ KIIHRD+KA+N+LLD++ + DFG A++ ++ + G G++APEY
Sbjct: 148 HDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVRGXIGHIAPEY 206
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRK--NNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
G S K+DVF +GV+LLE+I+G++ + ++ LL + L E L+D
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266
Query: 450 PVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMT 495
L+ + +E+ + I + LLC Q P +RP MS VV ML D +
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 159/293 (54%), Gaps = 9/293 (3%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKE 258
ES PL L EATN+F + +G G FG VYKG L DG +A+KR + S QG++E
Sbjct: 25 ESYRVPLVDLE---EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 259 FKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRR 317
F+ E+ ++ +H +LV IY+YM N +L HL+ + ++ + W++R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN- 376
L I G ARG+ YLH + IIHRD+K+ N+LLD++ PKI+DFG ++ G +Q +
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHL 197
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTW 436
++ GT GY+ PEY + G + KSDV+SFGV+L E++ R L +
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 437 KLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ G +++DP L P+ L KF + C+ DRP+M V+ L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 158/293 (53%), Gaps = 9/293 (3%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKE 258
ES PL L EATN+F + +G G FG VYKG L DG +A+KR + S QG++E
Sbjct: 25 ESYRVPLVDLE---EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 259 FKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRR 317
F+ E+ ++ +H +LV IY+YM N +L HL+ + ++ + W++R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN- 376
L I G ARG+ YLH + IIHRD+K+ N+LLD++ PKI+DFG ++ G Q +
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHL 197
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTW 436
++ GT GY+ PEY + G + KSDV+SFGV+L E++ R L +
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 437 KLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ G +++DP L P+ L KF + C+ DRP+M V+ L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 15/212 (7%)
Query: 215 TNHFSDE------NKLGQGGFGPVYKGTLADGKAIAVKRLSR----TSGQGLKEFKNEVN 264
TN+F + NK+G+GGFG VYKG + + +AVK+L+ T+ + ++F E+
Sbjct: 24 TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIK 82
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
++AK QH+NLV +Y YMPN SL L + L W R I G
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 142
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
A GI +LHE+ IHRD+K++N+LLD+ KISDFG AR + I GT
Sbjct: 143 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTT 199
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
YMAPE A+ G + KSD++SFGV+LLEII+G
Sbjct: 200 AYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 15/212 (7%)
Query: 215 TNHFSDE------NKLGQGGFGPVYKGTLADGKAIAVKRLSR----TSGQGLKEFKNEVN 264
TN+F + NK+G+GGFG VYKG + + +AVK+L+ T+ + ++F E+
Sbjct: 24 TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIK 82
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
++AK QH+NLV +Y YMPN SL L + L W R I G
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 142
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
A GI +LHE+ IHRD+K++N+LLD+ KISDFG AR I GT
Sbjct: 143 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTT 199
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
YMAPE A+ G + KSD++SFGV+LLEII+G
Sbjct: 200 AYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 15/212 (7%)
Query: 215 TNHFSDE------NKLGQGGFGPVYKGTLADGKAIAVKRLSR----TSGQGLKEFKNEVN 264
TN+F + NK+G+GGFG VYKG + + +AVK+L+ T+ + ++F E+
Sbjct: 18 TNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIK 76
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
++AK QH+NLV +Y YMPN SL L + L W R I G
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGA 136
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
A GI +LHE+ IHRD+K++N+LLD+ KISDFG AR I GT
Sbjct: 137 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTT 193
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
YMAPE A+ G + KSD++SFGV+LLEII+G
Sbjct: 194 AYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 116/212 (54%), Gaps = 15/212 (7%)
Query: 215 TNHFSDE------NKLGQGGFGPVYKGTLADGKAIAVKRLSR----TSGQGLKEFKNEVN 264
TN+F + NK G+GGFG VYKG + + +AVK+L+ T+ + ++F E+
Sbjct: 15 TNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIK 73
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
+ AK QH+NLV +Y Y PN SL L + L W R I G
Sbjct: 74 VXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGA 133
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
A GI +LHE+ IHRD+K++N+LLD+ KISDFG AR + I GT
Sbjct: 134 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT 190
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y APE A+ G + KSD++SFGV+LLEII+G
Sbjct: 191 AYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 136/285 (47%), Gaps = 31/285 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 84 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 197
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 243
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQP 499
EL + + LC ++ P DRPT + +L A++ PQP
Sbjct: 244 ELYQLMR---LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 285
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 136/285 (47%), Gaps = 31/285 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 78 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 191
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQP 499
EL + + LC ++ P DRPT + +L A++ PQP
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 136/285 (47%), Gaps = 31/285 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 86 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 199
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 245
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQP 499
EL + + LC ++ P DRPT + +L A++ PQP
Sbjct: 246 ELYQLMR---LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 287
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 136/285 (47%), Gaps = 31/285 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 87 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 200
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 246
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQP 499
EL + + LC ++ P DRPT + +L A++ PQP
Sbjct: 247 ELYQLMR---LCWKERPEDRPTFDYLRSVLEDFFTATEGQFQPQP 288
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 136/285 (47%), Gaps = 31/285 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 88 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAINYGTFTIKS 201
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 247
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQP 499
EL + + LC ++ P DRPT + +L A++ PQP
Sbjct: 248 ELYQLMR---LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 289
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 80 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 193
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EL + + LC ++ P DRPT + +L
Sbjct: 240 ELYQLMR---LCWKERPEDRPTFDYLRSVL 266
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 79 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 192
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 238
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EL + + LC ++ P DRPT + +L
Sbjct: 239 ELYQLMR---LCWKERPEDRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 78 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG-AKFPIKWTAPEAINYGTFTIKS 191
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPT 481
EL + + LC ++ P DRPT
Sbjct: 238 ELYQLMR---LCWKERPEDRPT 256
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 83 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAINYGTFTIKS 196
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 242
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EL + + LC ++ P DRPT + +L
Sbjct: 243 ELYQLMR---LCWKERPEDRPTFDYLRSVL 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 78 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAINYGTFTIKS 191
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EL + + LC ++ P DRPT + +L
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 84 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAINYGTFTIKS 197
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 243
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EL + + LC ++ P DRPT + +L
Sbjct: 244 ELYQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 73 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAINYGTFTIKS 186
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 232
Query: 460 ELLKFIHIGLLCVQQDPADRPT 481
EL + + LC ++ P DRPT
Sbjct: 233 ELYQLMR---LCWKERPEDRPT 251
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 26/262 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 74 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
R+L+A+N+L+ D ++ KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG-AKFPIKWTAPEAINYGTFTIKS 187
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 233
Query: 460 ELLKFIHIGLLCVQQDPADRPT 481
EL + + LC ++ P DRPT
Sbjct: 234 ELYQLMR---LCWKERPEDRPT 252
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G G V+ G +AVK L + S F E NL+ +LQH+ LVR
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N SL V ++L + L + IA G+ ++ E + IH
Sbjct: 78 TQEPIYI-ITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+N+L+ D ++ KI+DFG AR+ + A + APE G F+IKS
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG-AKFPIKWTAPEAINYGTFTIKS 191
Query: 402 DVFSFGVLLLEIIS-GR-KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
DV+SFG+LL EI++ GR G E Q L ++ P +C P+
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------ERGYRMVRP---DNC-PE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQP 499
EL + + LC ++ P DRPT + +L A++ PQP
Sbjct: 238 ELYQLMR---LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQP 279
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYIVI-EYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 35/275 (12%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ G + +AVK L + ++ F E NL+ LQH LVR
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM SL + + ++ + + IA G+ Y+ R IH
Sbjct: 78 TREEPIYIITEYMAKGSL-LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+NVL+ + + KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGCFTIKS 192
Query: 402 DVFSFGVLLLEIIS-------GRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQ 454
DV+SFG+LL EI++ GR N T L+ +G+ + + +
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADV------MTALS-------QGYRMPRV-----E 234
Query: 455 SCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+C PDEL + +C ++ +RPT + +L
Sbjct: 235 NC-PDELYDIMK---MCWKEKAEERPTFDYLQSVL 265
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYIVI-EYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 71 VSEEPIYI-VTEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 125
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 184
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 185 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 229
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C ++DP +RPT + L D T TEP + G
Sbjct: 230 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPG 272
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTS--GQGLKEFKNEVNLIAKLQHKNLVRXX 278
+ K+G G FG V++ G +AVK L + + EF EV ++ +L+H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ EY+ SL L + QLD +RRLS+ +A+G+ YLH +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
I+HRDLK+ N+L+D K+ DFG +R+ + AGT +MAPE +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 399 IKSDVFSFGVLLLEIIS 415
KSDV+SFGV+L E+ +
Sbjct: 218 EKSDVYSFGVILWELAT 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 141/293 (48%), Gaps = 38/293 (12%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQG-------LKEFKNEVNL 265
A N E ++G+GGFG V+KG L D +A+K L +G +EF+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
++ L H N+V+ + E++P L L D ++ W +L ++ IA
Sbjct: 77 MSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLD--DDMNP---KISDFGTARIFGGNQNQANTNII 380
GI Y+ ++ I+HRDL++ N+ L D+ P K++DFGT++ Q+ + + +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGL 186
Query: 381 AGTYGYMAPEY--AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKL 438
G + +MAPE A ++ K+D +SF ++L I++G F E+ + + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMI 242
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
EG + P + + C P + ++ LC DP RP S +V L+
Sbjct: 243 REEG-----LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 73 VSEEPIYI-VTEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 127
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 186
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 187 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 231
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C ++DP +RPT + L D T TEP + G
Sbjct: 232 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPG 274
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYI-VTEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYI-VCEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 28/288 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V+ GT +A+K L + + F E ++ KL+H LV+
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDAT-RSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL L D R+++L + + +A G+ Y+ R+ I
Sbjct: 74 SEEPIYI-VTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIE---RMNYI 127
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+++N+L+ + + KI+DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALYGRFTIK 186
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+++ K Y + + +L E ++ + C D
Sbjct: 187 SDVWSFGILLTELVT--KGRVPYPGMNNREVL-------------EQVERGYRMPCPQDC 231
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ + + C ++DP +RPT + L D T TEP + G
Sbjct: 232 PISLHELMIHCWKKDPEERPTFEYLQSFL-EDYFTA---TEPQYQPGE 275
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTS--GQGLKEFKNEVNLIAKLQHKNLVRXX 278
+ K+G G FG V++ G +AVK L + + EF EV ++ +L+H N+V
Sbjct: 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ EY+ SL L + QLD +RRLS+ +A+G+ YLH +
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
I+HR+LK+ N+L+D K+ DFG +R+ + + AGT +MAPE +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS--AAGTPEWMAPEVLRDEPSN 217
Query: 399 IKSDVFSFGVLLLEIIS 415
KSDV+SFGV+L E+ +
Sbjct: 218 EKSDVYSFGVILWELAT 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 72 VSEEPIXI-VTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 126
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG-AKFPIKWTAPEAALYGRFTIK 185
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 186 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 230
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C +++P +RPT + L D T TEP + G
Sbjct: 231 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFT---STEPQYQPG 273
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ K++H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYI-VTEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYI-VTEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 75 VSEEPIYI-VTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 129
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 188
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 189 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 233
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C +++P +RPT + L D T TEP + G
Sbjct: 234 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFT---STEPQYQPG 276
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM +K + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYI-VTEYM-SKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 26/288 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM +K + L + + + IA G+ Y+ R+ +
Sbjct: 82 VSEEPIYI-VMEYM-SKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 195
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 196 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 240
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGR 508
+ C ++DP +RPT + L D T TEP + G
Sbjct: 241 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFT---STEPQYQPGE 284
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 248 VSEEPIYI-VTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 361
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 362 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 406
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C +++P +RPT + L D T TEP + G
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFT---STEPQYQPG 449
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
KLG G FG V+ G + +AVK L + ++ F E NL+ LQH LVR
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I E+M SL + + ++ + + IA G+ Y+ R IH
Sbjct: 77 TKEEPIYIITEFMAKGSL-LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL+A+NVL+ + + KI+DFG AR+ N+ A + APE G F+IKS
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGCFTIKS 191
Query: 402 DVFSFGVLLLEIIS 415
+V+SFG+LL EI++
Sbjct: 192 NVWSFGILLYEIVT 205
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 38/293 (12%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQG-------LKEFKNEVNL 265
A N E ++G+GGFG V+KG L D +A+K L +G +EF+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
++ L H N+V+ + E++P L L D ++ W +L ++ IA
Sbjct: 77 MSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLD--DDMNP---KISDFGTARIFGGNQNQANTNII 380
GI Y+ ++ I+HRDL++ N+ L D+ P K++DFG ++ Q+ + + +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGL 186
Query: 381 AGTYGYMAPEY--AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKL 438
G + +MAPE A ++ K+D +SF ++L I++G F E+ + + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMI 242
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
EG + P + + C P + ++ LC DP RP S +V L+
Sbjct: 243 REEG-----LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM NK + L + + + IA G+ Y+ R+ +
Sbjct: 79 VSEEPIYI-VTEYM-NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 192
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 193 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 237
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C +++P +RPT + L D T TEP + G
Sbjct: 238 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFT---STEPQYQPG 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 76
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + K+ + I ARG+ YLH S IIH
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---IIH 131
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D KI DFG A + ++G+ +MAPE +S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 192 FQSDVYAFGIVLYELMTGQ 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 26/287 (9%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM NK + L + + + IA G+ Y+ R+ +
Sbjct: 79 VSEEPIYI-VTEYM-NKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYV 133
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQG-AKFPIKWTAPEAALYGRFTIK 192
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 193 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 237
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVG 507
+ C +++P +RPT + L D T TEP + G
Sbjct: 238 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFT---STEPQYQPG 280
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 23/279 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 190 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 249 VSEEPIYI-VTEYMSKGSL-LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 303
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG R+ N+ A + APE A+ G F+IK
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 362
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 363 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 407
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQP 499
+ C ++DP +RPT + L D T +P
Sbjct: 408 PESLHDLMCQCWRKDPEERPTFEYLQAFL-EDYFTSTEP 445
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 248 VSEEPIYI-VTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 361
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 362 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 406
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQP 499
+ C +++P +RPT + L D T +P
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFTSTEP 444
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 331 VSEEPIYI-VTEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 385
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 444
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 445 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 489
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQP 499
+ C +++P +RPT + L D T +P
Sbjct: 490 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFTSTEP 527
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 23/279 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLGQG FG V+ GT +A+K L + + F E ++ KL+H+ LV+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EYM SL + L + + + IA G+ Y+ R+ +
Sbjct: 248 VSEEPIYI-VGEYMSKGSL-LDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ +++ K++DFG AR+ N+ A + APE A+ G F+IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG-AKFPIKWTAPEAALYGRFTIK 361
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
SDV+SFG+LL E+ + K Y + +L + ++ + C P+
Sbjct: 362 SDVWSFGILLTELTT--KGRVPYPGMVNREVL-------------DQVERGYRMPCPPEC 406
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQP 499
+ C +++P +RPT + L D T +P
Sbjct: 407 PESLHDLMCQCWRKEPEERPTFEYLQAFL-EDYFTSTEP 444
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 32/286 (11%)
Query: 224 LGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
LG+G FG K T + G+ + +K L R + + F EV ++ L+H N+++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
I EY+ +L + + Q W +R+S IA G+ YLH + IIHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHR 132
Query: 343 DLKASNVLLDDDMNPKISDFGTARIFGGNQNQ------------ANTNIIAGTYGYMAPE 390
DL + N L+ ++ N ++DFG AR+ + Q + G +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
G + K DVFSFG++L EII GR N ++ T + L G
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII-GRVN-----ADPDYLPRTMDFGLNVRG-------- 238
Query: 451 VLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTI 496
L + C P+ F I + C DP RP+ + L + M +
Sbjct: 239 FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + K+ + I ARG+ YLH S IIH
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 342 RDLKASNVLLDDDMNPKISDFGTA----RIFGGNQNQANTNIIAGTYGYMAPEYAM---G 394
RDLK++N+ L +D KI DFG A R G +Q + ++G+ +MAPE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDS 199
Query: 395 GIFSIKSDVFSFGVLLLEIISGR 417
+S +SDV++FG++L E+++G+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 17/203 (8%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + K+ + I ARG+ YLH S IIH
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---IIH 143
Query: 342 RDLKASNVLLDDDMNPKISDFGTA----RIFGGNQNQANTNIIAGTYGYMAPEYAM---G 394
RDLK++N+ L +D KI DFG A R G +Q + ++G+ +MAPE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDS 199
Query: 395 GIFSIKSDVFSFGVLLLEIISGR 417
+S +SDV++FG++L E+++G+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQG-------LKEFKNEVNL 265
A N E ++G+GGFG V+KG L D +A+K L +G +EF+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
++ L H N+V+ + E++P L L D ++ W +L ++ IA
Sbjct: 77 MSNLNHPNIVK--LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIK--WSVKLRLMLDIA 132
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLD--DDMNP---KISDFGTARIFGGNQNQANTNII 380
GI Y+ ++ I+HRDL++ N+ L D+ P K++DF ++ Q+ + + +
Sbjct: 133 LGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGL 186
Query: 381 AGTYGYMAPEY--AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKL 438
G + +MAPE A ++ K+D +SF ++L I++G F E+ + + +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMI 242
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
EG + P + + C P + ++ LC DP RP S +V L+
Sbjct: 243 REEG-----LRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 129
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 190 FQSDVYAFGIVLYELMTGQ 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 132
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 99
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 154
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 215 FQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 100
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFS 398
RDLK++N+ L +D+ KI DFG A + ++G+ +MAPE +S
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 399 IKSDVFSFGVLLLEIISGR 417
+SDV++FG++L E+++G+
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 27/212 (12%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVR 276
E +G GGFG VY+ G +AVK Q ++ + E L A L+H N++
Sbjct: 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR---SVQLDWKRRLSIINGIARGILYLHE 333
+ E+ L+ + R + ++W + IARG+ YLH+
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLN-RVLSGKRIPPDILVNWAVQ------IARGMNYLHD 123
Query: 334 DSRLKIIHRDLKASNVLL-----DDDMNPKI---SDFGTARIFGGNQNQANTNIIAGTYG 385
++ + IIHRDLK+SN+L+ + D++ KI +DFG AR ++ AG Y
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYA 179
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
+MAPE +FS SDV+S+GVLL E+++G
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTA----RIFGGNQNQANTNIIAGTYGYMAPEYAM---G 394
RDLK++N+ L +D+ KI DFG A R G +Q + ++G+ +MAPE
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 183
Query: 395 GIFSIKSDVFSFGVLLLEIISGR 417
+S +SDV++FG++L E+++G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 92
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 147
Query: 342 RDLKASNVLLDDDMNPKISDFGTA----RIFGGNQNQANTNIIAGTYGYMAPEYAM---G 394
RDLK++N+ L +D+ KI DFG A R G +Q + ++G+ +MAPE
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 203
Query: 395 GIFSIKSDVFSFGVLLLEIISGR 417
+S +SDV++FG++L E+++G+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG VYKG A+ + ++ + Q L+ FKNEV ++ K +H N++
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 100
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ ++ SL HL + + + + I A+G+ YLH S IIH
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMDYLHAKS---IIH 155
Query: 342 RDLKASNVLLDDDMNPKISDFGTA----RIFGGNQNQANTNIIAGTYGYMAPEYAM---G 394
RDLK++N+ L +D+ KI DFG A R G +Q + ++G+ +MAPE
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----LSGSILWMAPEVIRMQDK 211
Query: 395 GIFSIKSDVFSFGVLLLEIISGR 417
+S +SDV++FG++L E+++G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 222 NKLGQGGFGPVYKGTL------ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNL 274
+LG+ FG VYKG L +A+A+K L + G +EF++E L A+LQH N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSL-----------DVHLFDATRSVQ--LDWKRRLSII 321
V I+ Y + L DV D R+V+ L+ + ++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 322 NGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNII 380
IA G+ YL S ++H+DL NVL+ D +N KISD G R ++ + + N +
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE M G FSI SD++S+GV+L E+ S
Sbjct: 209 LPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLG G FG V+ T +AVK + + ++ F E N++ LQH LV+
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I E+M SL + + + + + IA G+ ++ + + I
Sbjct: 79 VTKEPIYI-ITEFMAKGSL-LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 133
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ + KI+DFG AR+ N+ A + APE G F+IK
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGSFTIK 192
Query: 401 SDVFSFGVLLLEIIS 415
SDV+SFG+LL+EI++
Sbjct: 193 SDVWSFGILLMEIVT 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 25/215 (11%)
Query: 222 NKLGQGGFGPVYKGTL------ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNL 274
+LG+ FG VYKG L +A+A+K L + G +EF++E L A+LQH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSL-----------DVHLFDATRSVQ--LDWKRRLSII 321
V I+ Y + L DV D R+V+ L+ + ++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 322 NGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNII 380
IA G+ YL S ++H+DL NVL+ D +N KISD G R ++ + + N +
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE M G FSI SD++S+GV+L E+ S
Sbjct: 192 LPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 22/265 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ EYMP +L +L + R ++ L + I+ + YL + +
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNRE-EVTAVVLLYMATQISSAMEYLEKKN---F 151
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNTFSI 210
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ + L +G+ +E + C P
Sbjct: 211 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYDLLEKGYRME-----QPEGCPP- 258
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSS 484
K + C + PADRP+ +
Sbjct: 259 ---KVYELMRACWKWSPADRPSFAE 280
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 139/304 (45%), Gaps = 35/304 (11%)
Query: 224 LGQGGFGPVYKGTL--ADGKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRX 277
+G G FG VYKG L + GK +A+K L + + +F E ++ + H N++R
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I EYM N +LD L + + + + + ++ GIA G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT--YGYMAPEYAMGG 395
+HRDL A N+L++ ++ K+SDFG +R+ + +A G + APE
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 396 IFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQS 455
F+ SDV+SFG+++ E+++ + + S H ++ I+ +
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNH---------------EVMKAINDGFRLP 270
Query: 456 CAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML-----ASDSMTIPQPTEPAFSVGRVV 510
D + + C QQ+ A RP + +V +L A DS+ +P S+ R+
Sbjct: 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSI-RLP 329
Query: 511 ANSG 514
+ SG
Sbjct: 330 STSG 333
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 7/195 (3%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLG G FG V+ T +AVK + + ++ F E N++ LQH LV+
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I E+M SL + + + + + IA G+ ++ + + I
Sbjct: 252 VTKEPIYI-ITEFMAKGSL-LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 306
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ + KI+DFG AR+ N+ A + APE G F+IK
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG-AKFPIKWTAPEAINFGSFTIK 365
Query: 401 SDVFSFGVLLLEIIS 415
SDV+SFG+LL+EI++
Sbjct: 366 SDVWSFGILLMEIVT 380
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 110/213 (51%), Gaps = 14/213 (6%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-NEVNLIAKL 269
+ +++ F KLG G + VYKG G +A+K + S +G E++L+ +L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPN---KSLDVHLFDAT-RSVQLDWKRRLSIINGIA 325
+H+N+VR ++E+M N K +D T R ++L+ + +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--QLL 118
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
+G+ + HE+ KI+HRDLK N+L++ K+ DFG AR FG N ++ ++ T
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLW 173
Query: 386 YMAPEYAMGG-IFSIKSDVFSFGVLLLEIISGR 417
Y AP+ MG +S D++S G +L E+I+G+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 121/283 (42%), Gaps = 25/283 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E +G+G FG V K K +A+K++ S + K F E+ ++++ H N+V+
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY SL L A +S ++G+ YLH +I
Sbjct: 70 CLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 341 HRDLKASNVLL-DDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
HRDLK N+LL KI DFGTA Q N G+ +MAPE G +S
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN--KGSAAWMAPEVFEGSNYSE 182
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
K DVFS+G++L E+I+ RK F E G W + P++K P
Sbjct: 183 KCDVFSWGIILWEVITRRKP----FDEIGGPAFRIMWAV-----HNGTRPPLIKNLPKPI 233
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEP 502
E L C +DP+ RP+M +V ++ P EP
Sbjct: 234 ESLM-----TRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 121/283 (42%), Gaps = 25/283 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E +G+G FG V K K +A+K++ S + K F E+ ++++ H N+V+
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY SL L A +S ++G+ YLH +I
Sbjct: 71 CLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 341 HRDLKASNVLL-DDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
HRDLK N+LL KI DFGTA Q N G+ +MAPE G +S
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN--KGSAAWMAPEVFEGSNYSE 183
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
K DVFS+G++L E+I+ RK F E G W + P++K P
Sbjct: 184 KCDVFSWGIILWEVITRRKP----FDEIGGPAFRIMWAV-----HNGTRPPLIKNLPKPI 234
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEP 502
E L C +DP+ RP+M +V ++ P EP
Sbjct: 235 ESLM-----TRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L + ++D + L + I +G+
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGME 131
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 74
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 132
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 133 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 189
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 101
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 159
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 160 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 216
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 69
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 127
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 128 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 184
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 75
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 133
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 134 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 190
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 68
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 126
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 127 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 183
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 128
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 76
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 134
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 135 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 191
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 131
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYNKFSI 196
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 197 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 244
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 245 KVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 77
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 135
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 136 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 192
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 128
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 185
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 146
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 88
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 146
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 147 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 203
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG AR+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 196
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 197 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 244
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 245 KVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYNKFSI 192
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 193 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 240
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 241 KVYELMRA---CWQWNPSDRPSFAEI 263
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 196
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 197 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 244
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 245 KVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 191
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 192 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 240 KVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 191
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 192 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 240 KVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 136
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 195
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 196 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 243
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 244 KVYELMRA---CWQWNPSDRPSFAEI 266
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
++G G FG VYKG A+ + ++ + + + F+NEV ++ K +H N++
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYM 101
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
+ ++ SL HL Q+ + + I A+G+ YLH + IIHR
Sbjct: 102 TKDNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---IIHR 156
Query: 343 DLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM---GGIFSI 399
D+K++N+ L + + KI DFG A + G+ +MAPE FS
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 400 KSDVFSFGVLLLEIISG 416
+SDV+S+G++L E+++G
Sbjct: 217 QSDVYSYGIVLYELMTG 233
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 196
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 197 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 244
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 245 KVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 193
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 194 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 241
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 242 KVYELMRA---CWQWNPSDRPSFAEI 264
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 73
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I E++P SL +L ++D + L + I +G+
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGME 131
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 132 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 193
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 194 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 241
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 242 KVYELMRA---CWQWNPSDRPSFAEI 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGKA---IAVKRLSR-TSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V +G L A GK +A+K L + + +EF +E +++ + +H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLD--VHLFDATRSV-QLDWKRRLSIINGIARGILYLH 332
R + E+M N +LD + L D +V QL + ++ GIA G+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLA 133
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN-TNIIAGTYG--YMAP 389
E + +HRDL A N+L++ ++ K+SDFG +R N + T+ + G + AP
Sbjct: 134 E---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
E F+ SD +S+G+++ E++S F E W + + I+
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMS--------FGERP------YWDM-SNQDVINAIE 235
Query: 450 PVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ PD + L C Q+D RP VV L
Sbjct: 236 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 145
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 204
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 205 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 252
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 253 KVYELMRA---CWQWNPSDRPSFAEI 275
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 223 KLGQGGFGPVYKGTL------ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVR 276
+LG+G FG V+ D +AVK L S ++F+ E L+ LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 277 XXXXXXXXXXXXXIYEYMPNKSL---------DVHLFDATRSVQ---LDWKRRLSIINGI 324
++EYM + L D L V L + L++ + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGT 383
A G++YL + L +HRDL N L+ + KI DFG +R I+ + + +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+M PE + F+ +SDV+SFGV+L EI F + + L+ T + C
Sbjct: 225 R-WMPPESILYRKFTTESDVWSFGVVLWEI--------FTYGKQPWYQLSNTEAIDCITQ 275
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIP 497
EL P ++C P+ I C Q++P R ++ V L + + P
Sbjct: 276 GRELERP---RACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 34/280 (12%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGKA---IAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V +G L A GK +A+K L + + +EF +E +++ + +H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLD--VHLFDATRSV-QLDWKRRLSIINGIARGILYLH 332
R + E+M N +LD + L D +V QL + ++ GIA G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-----VGMLRGIASGMRYLA 135
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ-ANTNIIAGTYG--YMAP 389
E + +HRDL A N+L++ ++ K+SDFG +R N + T+ + G + AP
Sbjct: 136 E---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
E F+ SD +S+G+++ E++S F E W + + I+
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMS--------FGERP------YWDM-SNQDVINAIE 237
Query: 450 PVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ PD + L C Q+D RP VV L
Sbjct: 238 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGK---AIAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G G V G L G+ +A+K L + + + ++F +E +++ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
R + EYM N SLD L T Q + + ++ G+ G+ YL S
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMAPEYAMG 394
L +HRDL A NVL+D ++ K+SDFG +R+ + + A T + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF 228
Query: 395 GIFSIKSDVFSFGVLLLEIIS 415
FS SDV+SFGV++ E+++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 223 KLGQGGFGPVYKGTL------ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVR 276
+LG+G FG V+ D +AVK L S ++F+ E L+ LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 277 XXXXXXXXXXXXXIYEYMPNKSL---------DVHLFDATRSVQ---LDWKRRLSIINGI 324
++EYM + L D L V L + L++ + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGT 383
A G++YL + L +HRDL N L+ + KI DFG +R I+ + + +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+M PE + F+ +SDV+SFGV+L EI F + + L+ T + C
Sbjct: 196 R-WMPPESILYRKFTTESDVWSFGVVLWEI--------FTYGKQPWYQLSNTEAIDCITQ 246
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIP 497
EL P ++C P+ I C Q++P R ++ V L + + P
Sbjct: 247 GRELERP---RACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 293
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 137
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 196
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 197 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 244
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 245 KVYELMRA---CWQWNPSDRPSFAEI 267
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 223 KLGQGGFGPVYKGTL------ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVR 276
+LG+G FG V+ D +AVK L S ++F+ E L+ LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 277 XXXXXXXXXXXXXIYEYMPNKSL---------DVHLFDATRSVQ---LDWKRRLSIINGI 324
++EYM + L D L V L + L++ + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGT 383
A G++YL + L +HRDL N L+ + KI DFG +R I+ + + +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+M PE + F+ +SDV+SFGV+L EI F + + L+ T + C
Sbjct: 202 R-WMPPESILYRKFTTESDVWSFGVVLWEI--------FTYGKQPWYQLSNTEAIDCITQ 252
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIP 497
EL P ++C P+ I C Q++P R ++ V L + + P
Sbjct: 253 GRELERP---RACPPE----VYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 299
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 191
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 192 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 240 KVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 191
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 192 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 240 KVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 40 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 97
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 155
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 207
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 260
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 261 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 302
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 191
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 192 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 240 KVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 191
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 192 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 239
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 240 KVYELMRA---CWQWNPSDRPSFAEI 262
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGK---AIAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G G V G L G+ +A+K L + + + ++F +E +++ + H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
R + EYM N SLD L T Q + + ++ G+ G+ YL S
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMAPEYAMG 394
L +HRDL A NVL+D ++ K+SDFG +R+ + + A T + APE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 395 GIFSIKSDVFSFGVLLLEIIS 415
FS SDV+SFGV++ E+++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 70
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 128
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 180
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 233
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 234 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 70
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 128
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHRDL N+L++++ KI DFG ++ ++ + + A
Sbjct: 129 YL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 113/215 (52%), Gaps = 22/215 (10%)
Query: 224 LGQGGFGPVYKGT-LADGKAI----AVKRLSRTSG-QGLKEFKNEVNLIAKLQHKNLVRX 277
LG G FG VYKG + +G+ + A+K L+ T+G + EF +E ++A + H +LVR
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ----LDWKRRLSIINGIARGILYLHE 333
+ + MP+ L ++ + ++ L+W + IA+G++YL E
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 334 DSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
+++HRDL A NVL+ + KI+DFG AR+ G++ + N + +MA E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 394 GGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSE 426
F+ +SDV+S+GV + E+++ G+ +G E
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 87
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 145
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 146 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 197
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 250
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 251 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 292
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + EYM N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG R+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 221 ENKLGQGGFGPVYKGT------LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
+ +LG+G FG V+ D +AVK L + K+F+ E L+ LQH+++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 275 VRXXXXXXXXXXXXXIYEYMP----NKSLDVHLFDATRSV---------QLDWKRRLSII 321
V+ ++EYM NK L H DA V +L + L I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 322 NGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNII 380
+ IA G++YL + +HRDL N L+ ++ KI DFG +R ++ + + + +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWC 440
+M PE M F+ +SDV+SFGV+L EI + K F S T +
Sbjct: 197 LPIR-WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------TEVIECIT 249
Query: 441 EGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIP 497
+G +E + P E+ + L C Q++P R + + +L + P
Sbjct: 250 QGRVLE------RPRVCPKEVYDVM---LGCWQREPQQRLNIKEIYKILHALGKATP 297
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A + APE FSI
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG-AKFPIKWTAPESLAYNKFSI 192
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 193 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 240
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 241 KVYELMRA---CWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A + APE FSI
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAG-AKFPIKWTAPESLAYNKFSI 193
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 194 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 241
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 242 KVYELMRA---CWQWNPSDRPSFAEI 264
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 18/209 (8%)
Query: 224 LGQGGFGPVYKGT-LADGKAI----AVKRLSRTSG-QGLKEFKNEVNLIAKLQHKNLVRX 277
LG G FG VYKG + +G+ + A+K L+ T+G + EF +E ++A + H +LVR
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSV--QLDWKRRLSIINGIARGILYLHEDS 335
+ + MP+ L ++ + ++ QL L+ IA+G++YL E
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIAKGMMYLEER- 136
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
+++HRDL A NVL+ + KI+DFG AR+ G++ + N + +MA E
Sbjct: 137 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 396 IFSIKSDVFSFGVLLLEIIS--GRKNNGF 422
F+ +SDV+S+GV + E+++ G+ +G
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 55/321 (17%)
Query: 171 GALAPSSAPGRIGNHYSYDILRGGEQQAESQEFPLFPLGLALEATNHFSDENKLGQGGFG 230
GA+ P A GR G+ D+ L + FSD ++G G FG
Sbjct: 24 GAMDPMPAGGRAGSLKDPDVAE---------------LFFKDDPEKLFSDLREIGHGSFG 68
Query: 231 PVY-KGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQHKNLVRXXXXXXXXXX 286
VY + + + +A+K++S + Q +++++ EV + KL+H N ++
Sbjct: 69 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 128
Query: 287 XXXIYEYMPNKS---LDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRD 343
+ EY + L+VH + V++ ++ +G +G+ YLH + +IHRD
Sbjct: 129 AWLVMEYCLGSASDLLEVHK-KPLQEVEI-----AAVTHGALQGLAYLHSHN---MIHRD 179
Query: 344 LKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMG---GIFSIK 400
+KA N+LL + K+ DFG+A I A N GT +MAPE + G + K
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEGQYDGK 233
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
DV+S G+ +E+ + F+ + + L H + P L+ +
Sbjct: 234 VDVWSLGITCIELAERKPP---LFNMNAMSALY---------HIAQNESPALQSGHWSEY 281
Query: 461 LLKFIHIGLLCVQQDPADRPT 481
F+ C+Q+ P DRPT
Sbjct: 282 FRNFVDS---CLQKIPQDRPT 299
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 221 ENKLGQGGFGPVYKGTL------ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
+ +LG+G FG V+ D +AVK L S K+F E L+ LQH+++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 275 VRXXXXXXXXXXXXXIYEYMP----NKSLDVHLFDATR------SVQLDWKRRLSIINGI 324
V+ ++EYM NK L H DA +L + L I I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGT 383
A G++YL + +HRDL N L+ +++ KI DFG +R ++ + + + +
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFS 425
+M PE M F+ +SDV+S GV+L EI + K + S
Sbjct: 195 R-WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 217 HFSDENKLGQGGFGPVYK---GTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
H +LG+G FG V L D G+ +AVK+L ++ + L++F+ E+ ++ LQH
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQH 71
Query: 272 KNLVRXXXX--XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
N+V+ I EY+P SL +L ++D + L + I +G+
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGME 129
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMA 388
YL + IHR+L N+L++++ KI DFG ++ ++ + + A
Sbjct: 130 YL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
PE FS+ SDV+SFGV+L E+ +
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXXX 279
K+G+G +G VYK + G+ +A+KR+ +G+ E++L+ +L H N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
++E+M K L + D ++ D + ++ + + RG+ + H+ +I
Sbjct: 87 VIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RI 140
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG-IFS 398
+HRDLK N+L++ D K++DFG AR FG ++ T Y AP+ MG +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYS 198
Query: 399 IKSDVFSFGVLLLEIISGR 417
D++S G + E+I+G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 11/199 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXXX 279
K+G+G +G VYK + G+ +A+KR+ +G+ E++L+ +L H N+V
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
++E+M K L + D ++ D + ++ + + RG+ + H+ +I
Sbjct: 87 VIHSERCLTLVFEFM-EKDLK-KVLDENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RI 140
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG-IFS 398
+HRDLK N+L++ D K++DFG AR FG ++ T Y AP+ MG +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKKYS 198
Query: 399 IKSDVFSFGVLLLEIISGR 417
D++S G + E+I+G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 129/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G FG VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYNKFSI 189
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + + ++L + + +E + P+
Sbjct: 190 KSDVWAFGVLLWEIAT------YGMSPYPGIDPSQVYELLEKDYRME------RPEGCPE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 238 KVYELMRA---CWQWNPSDRPSFAEI 260
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
E KLG G FG V+ T +AVK + + ++ F E N++ LQH LV+
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I E+M SL + + + + + IA G+ ++ + + I
Sbjct: 246 VTKEPIYI-ITEFMAKGSL-LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 300
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRDL+A+N+L+ + KI+DFG AR+ A I + APE G F+IK
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV------GAKFPI-----KWTAPEAINFGSFTIK 349
Query: 401 SDVFSFGVLLLEIIS 415
SDV+SFG+LL+EI++
Sbjct: 350 SDVWSFGILLMEIVT 364
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 127/274 (46%), Gaps = 40/274 (14%)
Query: 218 FSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQHKN 273
FSD ++G G FG VY + + + +A+K++S + Q +++++ EV + KL+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKS---LDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
++ + EY + L+VH + V++ ++ +G +G+ Y
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEI-----AAVTHGALQGLAY 130
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH + +IHRD+KA N+LL + K+ DFG+A I A N GT +MAPE
Sbjct: 131 LHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPE 181
Query: 391 YAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
+ G + K DV+S G+ +E+ + F+ + + L H +
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFNMNAMSALY---------HIAQN 229
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPT 481
P L+ + F+ C+Q+ P DRPT
Sbjct: 230 ESPALQSGHWSEYFRNFVDS---CLQKIPQDRPT 260
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 378
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHR+L A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 437
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 438 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 485
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 486 KVYELMRA---CWQWNPSDRPSFAEI 508
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAG-AKFPIKWTAPESLAYNKFSI 189
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + + ++L + + +E + P+
Sbjct: 190 KSDVWAFGVLLWEIAT------YGMSPYPGIDPSQVYELLEKDYRME------RPEGCPE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 238 KVYELMRA---CWQWNPSDRPSFAEI 260
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R +++ L + I+ + YL + +
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEKKN---F 336
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHR+L A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG-AKFPIKWTAPESLAYNKFSI 395
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + L+ ++L + + +E + P+
Sbjct: 396 KSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEGCPE 443
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 444 KVYELMRA---CWQWNPSDRPSFAEI 466
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 132/269 (49%), Gaps = 28/269 (10%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 339
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT---YGYMAPEYAMGGI 396
IHR+L A N L+ ++ K++DFG +R+ G+ A+ AG + APE
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH----AGAKFPIKWTAPESLAYNK 395
Query: 397 FSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSC 456
FSIKSDV++FGVLL EI + + S + L+ ++L + + +E +
Sbjct: 396 FSIKSDVWAFGVLLWEIAT------YGMSPYPGIDLSQVYELLEKDYRME------RPEG 443
Query: 457 APDELLKFIHIGLLCVQQDPADRPTMSSV 485
P+++ + + C Q +P+DRP+ + +
Sbjct: 444 CPEKVYELMRA---CWQWNPSDRPSFAEI 469
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 13/201 (6%)
Query: 222 NKLGQGGFGPVY--KGTLADGKAIAVKRL---SRTSGQGLKEFKNEVNLIAKLQHKNLVR 276
+KLG GG VY + T+ + K +A+K + R + LK F+ EV+ ++L H+N+V
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ EY+ +L ++ ++ + +D ++ N I GI + H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTA--INFTNQILDGIKHAHD--- 129
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
++I+HRD+K N+L+D + KI DFG A+ + TN + GT Y +PE A G
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 397 FSIKSDVFSFGVLLLEIISGR 417
+D++S G++L E++ G
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 44/284 (15%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGK---AIAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V G L GK +A+K L + + + ++F +E +++ + H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLF--DATRSV-QLDWKRRLSIINGIARGILYLH 332
I EYM N SLD L D +V QL + ++ GI G+ YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL- 126
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG------Y 386
S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G +
Sbjct: 127 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TRGGKIPIRW 179
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKLWCEGHAV 445
APE F+ SDV+S+G+++ E++S G + Y+ Q ++ K EG+
Sbjct: 180 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVI----KAIEEGYR- 231
Query: 446 ELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ P + A +L+ L C Q++ +DRP +V ML
Sbjct: 232 --LPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNML 267
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 44/284 (15%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGK---AIAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V G L GK +A+K L + + + ++F +E +++ + H N++
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLF--DATRSV-QLDWKRRLSIINGIARGILYLH 332
I EYM N SLD L D +V QL + ++ GI G+ YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL- 147
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG------Y 386
S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G +
Sbjct: 148 --SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TRGGKIPIRW 200
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKLWCEGHAV 445
APE F+ SDV+S+G+++ E++S G + Y+ Q ++ K EG+
Sbjct: 201 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVI----KAIEEGYR- 252
Query: 446 ELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ P + A +L+ L C Q++ +DRP +V ML
Sbjct: 253 --LPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNML 288
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 44/284 (15%)
Query: 221 ENKLGQGGFGPVYKGTL-ADGK---AIAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V G L GK +A+K L + + + ++F +E +++ + H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLF--DATRSV-QLDWKRRLSIINGIARGILYLH 332
I EYM N SLD L D +V QL + ++ GI G+ YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-----VGMLRGIGSGMKYL- 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG------Y 386
S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G +
Sbjct: 133 --SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT-----TRGGKIPIRW 185
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKLWCEGHAV 445
APE F+ SDV+S+G+++ E++S G + Y+ Q ++ K EG+
Sbjct: 186 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVI----KAIEEGYR- 237
Query: 446 ELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+ P + A +L+ L C Q++ +DRP +V ML
Sbjct: 238 --LPPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNML 273
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + E M N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 70
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + E M N SLD L Q + + ++ GIA
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 128
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 129 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 180
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 233
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 234 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 275
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 22/266 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXX 279
++KLG G +G VY+G +AVK L + + ++EF E ++ +++H NLV+
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I E+M +L +L + R ++ L + I+ + YL + +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ ++ K++DFG +R+ G+ A+ + APE FSI
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAG-AKFPIKWTAPESLAYNKFSI 189
Query: 400 KSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPD 459
KSDV++FGVLL EI + + S + + ++L + + +E + P+
Sbjct: 190 KSDVWAFGVLLWEIAT------YGMSPYPGIDPSQVYELLEKDYRME------RPEGCPE 237
Query: 460 ELLKFIHIGLLCVQQDPADRPTMSSV 485
++ + + C Q +P+DRP+ + +
Sbjct: 238 KVYELMRA---CWQWNPSDRPSFAEI 260
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG--TLADGKAIAVK----RLSRTSGQGLKEFKNEVNL 265
L+ATN S + +G G FG V G L K I+V ++ T Q ++F E ++
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASI 99
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ + H N++R + E M N SLD L Q + + ++ GIA
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIA 157
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G+ YL S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRG 209
Query: 386 ------YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKL 438
+ +PE F+ SDV+S+G++L E++S G + Y+ Q ++ K
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP---YWEMSNQDVI----KA 262
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
EG+ + P + A +L+ L C Q+D +RP +V +L
Sbjct: 263 VDEGYR---LPPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTS---GQGLKEFKNEVNLIAK 268
E F N LG+G F VY+ ++ G +A+K + + + ++ +NEV + +
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H +++ + E N ++ +L + + + R ++ I G+
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MHQIITGM 125
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
LYLH I+HRDL SN+LL +MN KI+DFG A + T + GT Y++
Sbjct: 126 LYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYIS 180
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
PE A ++SDV+S G + ++ GR
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 7/197 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG V+ G + +A+K + R ++F E ++ KL H LV+
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
++E+M + L +L T+ + L + + G+ YL E S +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+ ++ K+SDFG R +Q ++T + +PE +S KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKS 185
Query: 402 DVFSFGVLLLEIISGRK 418
DV+SFGVL+ E+ S K
Sbjct: 186 DVWSFGVLMWEVFSEGK 202
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 222 NKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
++G+G FG V+ G L AD +AVK T LK +F E ++ + H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E + + D F T +L K L ++ A G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ + KISDFG +R A+ + + APE G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 400 KSDVFSFGVLLLEIIS 415
+SDV+SFG+LL E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
+ F D LG+GGFG V+ + A GK A K+L++ + K ++ E ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILY 330
+ +V + M + H+++ + R + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH+ + II+RDLK NVLLDDD N +ISD G A Q + T AGT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D F+ GV L E+I+ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
+ F D LG+GGFG V+ + A GK A K+L++ + K ++ E ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILY 330
+ +V + M + H+++ + R + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH+ + II+RDLK NVLLDDD N +ISD G A Q + T AGT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D F+ GV L E+I+ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 222 NKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
++G+G FG V+ G L AD +AVK T LK +F E ++ + H N+VR
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E + + D F T +L K L ++ A G+ YL
Sbjct: 180 VCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDL A N L+ + KISDFG +R A+ + + APE G +S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 400 KSDVFSFGVLLLEIIS 415
+SDV+SFG+LL E S
Sbjct: 295 ESDVWSFGILLWETFS 310
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
+ F D LG+GGFG V+ + A GK A K+L++ + K ++ E ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILY 330
+ +V + M + H+++ + R + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH+ + II+RDLK NVLLDDD N +ISD G A Q + T AGT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D F+ GV L E+I+ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
+ F D LG+GGFG V+ + A GK A K+L++ + K ++ E ++AK+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILY 330
+ +V + M + H+++ + R + I G+ +
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH+ + II+RDLK NVLLDDD N +ISD G A Q + T AGT G+MAPE
Sbjct: 305 LHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D F+ GV L E+I+ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG V+ G + +A+K + R ++F E ++ KL H LV+
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
++E+M + L +L T+ + L + + G+ YL E +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+ ++ K+SDFG R +Q ++T + +PE +S KS
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKS 183
Query: 402 DVFSFGVLLLEIISGRK 418
DV+SFGVL+ E+ S K
Sbjct: 184 DVWSFGVLMWEVFSEGK 200
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG V+ G + +A+K + R ++F E ++ KL H LV+
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
++E+M + L +L T+ + L + + G+ YL E +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+ ++ K+SDFG R +Q ++T + +PE +S KS
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKS 185
Query: 402 DVFSFGVLLLEIISGRK 418
DV+SFGVL+ E+ S K
Sbjct: 186 DVWSFGVLMWEVFSEGK 202
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 132/309 (42%), Gaps = 47/309 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 123
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQA 375
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 376 NTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYT 435
+M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 238
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMT 495
EG L+D K PD LL+ + +C Q +P RP+ ++ +
Sbjct: 239 ----MEGG---LLD---KPDNCPDMLLELMR---MCWQYNPKMRPSFLEIIS-------S 278
Query: 496 IPQPTEPAF 504
I + EP F
Sbjct: 279 IKEEMEPGF 287
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 128/281 (45%), Gaps = 38/281 (13%)
Query: 221 ENKLGQGGFGPVYKGTLA-DGK-----AIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
E +G G FG V G L GK AI ++ T Q ++F E +++ + H N+
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPNI 85
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+ + EYM N SLD L Q + + ++ GI+ G+ YL
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYL--- 140
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG------YMA 388
S + +HRDL A N+L++ ++ K+SDFG +R+ + A T T G + A
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT-----TRGGKIPIRWTA 195
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELI 448
PE F+ SDV+S+G+++ E++S + Y+ Q ++ K EG+ L
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERP--YWEMTNQDVI----KAVEEGY--RLP 247
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
P+ C P L + + L C Q++ RP +V ML
Sbjct: 248 SPM---DC-PAALYQLM---LDCWQKERNSRPKFDEIVNML 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG V+ G + +A+K + R ++F E ++ KL H LV+
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
++E+M + L +L T+ + L + + G+ YL E +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+ ++ K+SDFG R +Q ++T + +PE +S KS
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKS 188
Query: 402 DVFSFGVLLLEIISGRK 418
DV+SFGVL+ E+ S K
Sbjct: 189 DVWSFGVLMWEVFSEGK 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 216 NHFSDENKLGQGGFGPV---YKGTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
H ++LG+G FG V L D G +AVK+L + ++F+ E+ ++ L
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 271 HKNLV--RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+V R + EY+P+ L F +LD R L + I +G+
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCL--RDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYM 387
YL SR + +HRDL A N+L++ + + KI+DFG A++ +++ + +
Sbjct: 125 EYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIIS 415
APE IFS +SDV+SFGV+L E+ +
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+KL H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 278
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 279 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 311
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 117/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+KL H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 264
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 265 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG VYK + +A ++ T S + L+++ E++++A H N+V+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATR-----SVQLDWKRRLSIINGIARGILYLHEDSR 336
+ E+ ++D + + R +Q+ K+ L +N YLH++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN-------YLHDN-- 154
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
KIIHRDLKA N+L D + K++DFG + + + GT +MAPE M
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 397 -----FSIKSDVFSFGVLLLEI 413
+ K+DV+S G+ L+E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG VYK + +A ++ T S + L+++ E++++A H N+V+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATR-----SVQLDWKRRLSIINGIARGILYLHEDSR 336
+ E+ ++D + + R +Q+ K+ L +N YLH++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN-------YLHDN-- 154
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
KIIHRDLKA N+L D + K++DFG + + + GT +MAPE M
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 397 -----FSIKSDVFSFGVLLLEI 413
+ K+DV+S G+ L+E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 216 NHFSDENKLGQGGFGPV---YKGTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
H ++LG+G FG V L D G +AVK+L + ++F+ E+ ++ L
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 271 HKNLV--RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+V R + EY+P+ L F +LD R L + I +G+
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL--RDFLQRHRARLDASRLLLYSSQICKGM 128
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYM 387
YL SR + +HRDL A N+L++ + + KI+DFG A++ +++ + +
Sbjct: 129 EYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIIS 415
APE IFS +SDV+SFGV+L E+ +
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 50/300 (16%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLADG-------KAIAVKRLSRTSGQGLK-EFKNEVNLIA 267
N+ +G+G FG V++ A G +AVK L + ++ +F+ E L+A
Sbjct: 47 NNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPN-------KSLDVHLFDATRSVQLDWKRRLS- 319
+ + N+V+ ++EYM +S+ H + L + R+S
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 320 -------------IINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR 366
I +A G+ YL E K +HRDL N L+ ++M KI+DFG +R
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
Query: 367 -IFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFS 425
I+ + +A+ N A +M PE ++ +SDV+++GV+L EI S Y+
Sbjct: 223 NIYSADYYKADGN-DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP--YYG 279
Query: 426 EHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSV 485
+ ++ Y +G+ + +C + L+ ++ LC + PADRP+ S+
Sbjct: 280 MAHEEVIYYVR----DGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 216 NHFSDENKLGQGGFGPV---YKGTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
H ++LG+G FG V L D G +AVK+L + ++F+ E+ ++ L
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 271 HKNLV--RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+V R + EY+P+ L F +LD R L + I +G+
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL--RDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYM 387
YL SR + +HRDL A N+L++ + + KI+DFG A++ +++ + +
Sbjct: 128 EYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIIS 415
APE IFS +SDV+SFGV+L E+ +
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG VYK + +A ++ T S + L+++ E++++A H N+V+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATR-----SVQLDWKRRLSIINGIARGILYLHEDSR 336
+ E+ ++D + + R +Q+ K+ L +N YLH++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN-------YLHDN-- 154
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
KIIHRDLKA N+L D + K++DFG + + + GT +MAPE M
Sbjct: 155 -KIIHRDLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 397 -----FSIKSDVFSFGVLLLEI 413
+ K+DV+S G+ L+E+
Sbjct: 212 SKDRPYDYKADVWSLGITLIEM 233
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 263
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 264 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 296
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 47/309 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 132
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQA 375
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 376 NTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYT 435
+M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV 247
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMT 495
EG L+D K PD L + + +C Q +P RP+ ++ +
Sbjct: 248 ----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS-------S 287
Query: 496 IPQPTEPAF 504
I + EP F
Sbjct: 288 IKEEMEPGF 296
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 255
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 256 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 288
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 216 NHFSDENKLGQGGFGPV---YKGTLAD--GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
H ++LG+G FG V L D G +AVK+L + ++F+ E+ ++ L
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 271 HKNLV--RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+V R + EY+P+ L F +LD R L + I +G+
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL--RDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYM 387
YL SR + +HRDL A N+L++ + + KI+DFG A++ +++ + +
Sbjct: 141 EYL--GSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIIS 415
APE IFS +SDV+SFGV+L E+ +
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 263
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 264 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 296
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 278
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 279 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 311
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 221 ENKLGQGGFGPVYKGTLA-DGKA---IAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V G L GK +A+K L S + + ++F +E +++ + H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I E+M N SLD L Q + + ++ GIA G+ YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYLAD-- 153
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN-TNIIAGTYG--YMAPEYA 392
+ +HRDL A N+L++ ++ K+SDFG +R + + T+ + G + APE
Sbjct: 154 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 393 MGGIFSIKSDVFSFGVLLLEIIS 415
F+ SDV+S+G+++ E++S
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEV 263
PLG + +F K+G+G +G VYK G+ +A+K++ T +G+ E+
Sbjct: 1 PLG----SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIIN 322
+L+ +L H N+V+ ++E++ S+D+ F DA+ + S +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ + H +++HRDLK N+L++ + K++DFG AR FG ++
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 383 TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
T Y APE +G +S D++S G + E+++ R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG V+ G + +A+K + R ++F E ++ KL H LV+
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E+M + L +L T+ + L + + G+ YL E +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+ ++ K+SDFG R +Q ++T + +PE +S KS
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKS 186
Query: 402 DVFSFGVLLLEIISGRK 418
DV+SFGVL+ E+ S K
Sbjct: 187 DVWSFGVLMWEVFSEGK 203
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR NT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 264
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 265 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 297
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 280
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 281 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 313
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 270
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 271 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 303
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 278
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 279 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 311
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
++G G FG V+ G + +A+K + S +F E ++ KL H LV+
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
++E+M + L +L T+ + L + + G+ YL E +IH
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+ ++ K+SDFG R +Q ++T + +PE +S KS
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKS 205
Query: 402 DVFSFGVLLLEIISGRK 418
DV+SFGVL+ E+ S K
Sbjct: 206 DVWSFGVLMWEVFSEGK 222
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 221 ENKLGQGGFGPVYKGTLA-DGK---AIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V G L GK A+A+K L + + ++F E +++ + H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ E+M N +LD L Q + + ++ GIA G+ YL +
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQLVGMLRGIAAGMRYLAD-- 163
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT-YGYMAPEYAMG 394
+ +HRDL A N+L++ ++ K+SDFG +R+ + T + APE
Sbjct: 164 -MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 395 GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQ 454
F+ SDV+S+G+++ E++S + Y+ Q ++ K EG+ +
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQDVI----KAIEEGYRLP-------- 268
Query: 455 SCAPDELLKFIHIGLL-CVQQDPADRPTMSSVVVML 489
AP + +H +L C Q++ A+RP +V +L
Sbjct: 269 --APMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGK-AIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV 275
F+ +++G+G FG VYKG K +A+K + + +++ + E+ ++++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
R I EY+ S D + L+ +I+ I +G+ YLH +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSA----LDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
+ IHRD+KA+NVLL + + K++DFG A Q N GT +MAPE
Sbjct: 137 K---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 396 IFSIKSDVFSFGVLLLEIISGRKNN 420
+ K+D++S G+ +E+ G N
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPN 216
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 120/281 (42%), Gaps = 40/281 (14%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYM 387
E+ IHRD+ A N LL KI DFG AR G + ++ +M
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP--VKWM 253
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAV 445
PE M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSG 302
Query: 446 ELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 303 GRMDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 337
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 34/216 (15%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNL--IAKLQHKNLVR----- 276
+G+G +G VYKG+L D + +AVK S + Q F NE N+ + ++H N+ R
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGD 76
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED-- 334
+ EY PN SL +L T DW + + + RG+ YLH +
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQ-----NQANTNII-AGTY 384
+ I HRDL + NVL+ +D ISDFG + GN+ + N I GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTI 192
Query: 385 GYMAPEYAMGGI------FSIKS-DVFSFGVLLLEI 413
YMAPE G + ++K D+++ G++ EI
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 125
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 183 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 239
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 240 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 279
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 280 SIKEEMEPGF 289
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 120/281 (42%), Gaps = 40/281 (14%)
Query: 224 LGQGGFGPVYKGTLADGK------AIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYM 387
E+ IHRD+ A N LL KI DFG AR G + ++ +M
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP--VKWM 230
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAV 445
PE M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSG 279
Query: 446 ELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 280 GRMDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 314
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 74 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 129
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 130 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 187 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 243
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 244 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 283
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 284 SIKEEMEPGF 293
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 131
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 189 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 245
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 246 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 285
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 286 SIKEEMEPGF 295
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG AR +M P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 290
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 291 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 323
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 207 PLGLALEAT-NHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRLSRTSGQGL---KEFKN 261
PLG + T F LG+G FG VY K I A+K L +T + + +
Sbjct: 2 PLGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 262 EVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSII 321
EV + + L+H N++R I EY P ++ L +R D +R + I
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYI 118
Query: 322 NGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIA 381
+A + Y H ++IHRD+K N+LL + KI+DFG + + + + +
Sbjct: 119 TELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLC 171
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+ PE G + K D++S GVL E + G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEV 263
PLG + +F K+G+G +G VYK G+ +A+K++ T +G+ E+
Sbjct: 1 PLG----SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIIN 322
+L+ +L H N+V+ ++E++ S+D+ F DA+ + S +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ + H +++HRDLK N+L++ + K++DFG AR FG ++
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 383 TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
T Y APE +G +S D++S G + E+++ R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 125
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N + +D KI DFG R I+ + +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 183 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 239
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD LL+ + +C Q +P RP+ ++
Sbjct: 240 V----MEGG---LLD---KPDNCPDMLLELMR---MCWQYNPKMRPSFLEIIS------- 279
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 280 SIKEEMEPGF 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 131
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 189 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 245
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 246 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 285
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 286 SIKEEMEPGF 295
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 160
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 217
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 218 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 274
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 275 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 314
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 315 SIKEEMEPGF 324
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 125/291 (42%), Gaps = 51/291 (17%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATRS--VQLDWKRR 317
HKN++ I EY +L +L F+ + + QL K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT 377
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 378 NIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYT 435
+MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------L 261
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 262 FKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 138
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 196 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 252
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 253 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 292
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 293 SIKEEMEPGF 302
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWK----------- 315
+ ++VR I E M L +L RS++ + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL----RSLRPEMENNPVLAPPSLS 132
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQ 374
+ + + IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTY 434
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 190 KGGKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRF 246
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSM 494
EG L+D K PD L + + +C Q +P RP+ ++
Sbjct: 247 V----MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS------- 286
Query: 495 TIPQPTEPAF 504
+I + EP F
Sbjct: 287 SIKEEMEPGF 296
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIA 267
++L+ F+ K+G+G FG V+KG K +A+K + + +++ + E+ +++
Sbjct: 1 MSLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARG 327
+ + + I EY+ S D LD + +I+ I +G
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKG 116
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+ YLH + + IHRD+KA+NVLL + K++DFG A Q + NT GT +M
Sbjct: 117 LDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWM 171
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
APE + K+D++S G+ +E+ G
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ S+D+ F DA+ + S + + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 13/211 (6%)
Query: 212 LEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAK 268
L + +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARG 327
L H N+V+ ++E++ S+D+ F DA+ + S + + +G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+ + H +++HRDLK N+L++ + K++DFG AR FG ++ T Y
Sbjct: 118 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 388 APEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
APE +G +S D++S G + E+++ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 15/215 (6%)
Query: 207 PLGLALEAT-NHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRLSRTSGQ--GLK-EFKN 261
PLG + T F LG+G FG VY K I A+K L +T + G++ + +
Sbjct: 2 PLGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 262 EVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSII 321
EV + + L+H N++R I EY P ++ L +R D +R + I
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYI 118
Query: 322 NGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIA 381
+A + Y H ++IHRD+K N+LL + KI+DFG + + + +
Sbjct: 119 TELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLC 171
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+ PE G + K D++S GVL E + G
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 17/264 (6%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNE 262
PLG A F LG+G FG VY K I A+K L ++ G++ + + E
Sbjct: 2 PLGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 263 VNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIIN 322
V + + L+H N++R I EY P L + + + D +R + I
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYIT 118
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+A + Y H ++IHRD+K N+LL KI+DFG + + + + + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCG 171
Query: 383 TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLW 439
T Y+ PE G + K D++S GVL E + G+ + N + + + + +T+ +
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 231
Query: 440 CEGHAVELIDPVLKQSCAPDELLK 463
A +LI +LK + + +L+
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLR 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YL+ K +HRDL A N ++ D KI DFG R +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELI 448
PE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQP 254
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 255 D-----NC-PERVTDLMR---MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YL+ K +HRDL A N ++ D KI DFG R +MA
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELI 448
PE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQP 251
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 252 D-----NC-PERVTDLMR---MCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 215 TNHFSDEN-----KLGQGGFGPVYKGTLADGKA----IAVKRL--SRTSGQGLK-EFKNE 262
T HF+ ++ LG+G FG VY LA K +A+K L S+ +G++ + + E
Sbjct: 17 TRHFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 263 VNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIIN 322
+ + A L H N++R I EY P L L +S D +R +I+
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIME 130
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+A ++Y H K+IHRD+K N+LL KI+DFG + + + G
Sbjct: 131 ELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG----WSVHAPSLRRKTMCG 183
Query: 383 TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQT 430
T Y+ PE G + + K D++ GVL E++ G N F + H +T
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG--NPPFESASHNET 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YL+ K +HRDL A N ++ D KI DFG R +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELI 448
PE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQP 254
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 255 D-----NC-PERVTDLMR---MCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 14/216 (6%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEV 263
PLG + E +F K+G+G +G VYK G+ +A+K++ T +G+ E+
Sbjct: 2 PLG-SPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIIN 322
+L+ +L H N+V+ ++E++ D+ F DA+ + S +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 117
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ + H +++HRDLK N+L++ + K++DFG AR FG ++
Sbjct: 118 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 172
Query: 383 TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
T Y APE +G +S D++S G + E+++ R
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLD-------WKRRLS 319
+ ++VR I E M L +L ++ + + +
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 320 IINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTN 378
+ IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 189
Query: 379 IIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKL 438
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 190 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV--- 243
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQ 498
EG L+D K PD L + + +C Q +P RP+ ++ +I +
Sbjct: 244 -MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS-------SIKE 286
Query: 499 PTEPAF 504
EP F
Sbjct: 287 EMEPGF 292
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 224 LGQGGFGPVYKGTLA------DGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVR 276
LG G FG VY+G ++ +AVK L S Q +F E +I+K H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDA----TRSVQLDWKRRLSIINGIARGILYLH 332
+ E M L L + ++ L L + IA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ IHRD+ A N LL KI DFG A+ +M P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGF--YFSEHGQTLLTYTWKLWCEGHAVEL 447
E M GIF+ K+D +SFGVLL EI S G+ Y S+ Q +L + +
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFV-------TSGGR 264
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+DP ++C P + + I C Q P DRP + ++
Sbjct: 265 MDP--PKNC-PGPVYR---IMTQCWQHQPEDRPNFAIIL 297
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 214 ATNHFSDENKLGQGGFGPVY----KGTLADGKA--IAVKRLSRTSGQGLK-EFKNEVNLI 266
A + +LGQG FG VY KG + D +A+K ++ + + EF NE +++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLD-------WKRRLS 319
+ ++VR I E M L +L ++ + + +
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 320 IINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTN 378
+ IA G+ YL+ + K +HRDL A N ++ +D KI DFG R I+ + +
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 379 IIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKL 438
+ +M+PE G+F+ SDV+SFGV+L EI + + Y + +L +
Sbjct: 200 GLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP--YQGLSNEQVLRFV--- 253
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQ 498
EG L+D K PD L + + +C Q +P RP+ ++ +I +
Sbjct: 254 -MEGG---LLD---KPDNCPDMLFELMR---MCWQYNPKMRPSFLEIIS-------SIKE 296
Query: 499 PTEPAF 504
EP F
Sbjct: 297 EMEPGF 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 245
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 246 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 288
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 210 LALEATNHFSDENKLGQGGFG-PVYKGTLADGKAIAVKRL--SRTSGQGLKEFKNEVNLI 266
L ++ + K+G+G FG + + DG+ +K + SR S + +E + EV ++
Sbjct: 18 LYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
A ++H N+V+ + +Y L +A + V + L I
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL-FKRINAQKGVLFQEDQILDWFVQICL 136
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ ++H+ KI+HRD+K+ N+ L D ++ DFG AR+ A I GT Y
Sbjct: 137 ALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI--GTPYY 191
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEI 413
++PE ++ KSD+++ G +L E+
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 260
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 261 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 129/289 (44%), Gaps = 34/289 (11%)
Query: 224 LGQGGFGPVYKGTL--ADGKA--IAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V +G L DG + +AVK +L +S + ++EF +E + H N++R
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 278 XXXXXXXXXX-----XXIYEYMPNKSLDVHLFDA---TRSVQLDWKRRLSIINGIARGIL 329
I +M L +L + T + + L + IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMA 388
YL S +HRDL A N +L DDM ++DFG + +I+ G+ + I ++A
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG-RIAKMPVKWIA 217
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELI 448
E +++ KSDV++FGV + EI + G Q Y + L H L
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT----RGMTPYPGVQNHEMYDYLL----HGHRLK 269
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIP 497
P + C DEL + ++ C + DP DRPT S + + L ++P
Sbjct: 270 QP---EDCL-DELYEIMYS---CWRTDPLDRPTFSVLRLQLEKLLESLP 311
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 227 GGFGPVYKGTLADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXX 285
G FG VYK + +A ++ T S + L+++ E++++A H N+V+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 286 XXXXIYEYMPNKSLDVHLFDATR-----SVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ E+ ++D + + R +Q+ K+ L +N YLH++ KII
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN-------YLHDN---KII 130
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI---- 396
HRDLKA N+L D + K++DFG + Q + I GT +MAPE M
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWMAPEVVMCETSKDR 189
Query: 397 -FSIKSDVFSFGVLLLEI 413
+ K+DV+S G+ L+E+
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 11/210 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIA 267
++L+ F+ K+G+G FG V+KG K +A+K + + +++ + E+ +++
Sbjct: 1 MSLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARG 327
+ + + I EY+ S D LD + +I+ I +G
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKG 116
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+ YLH + + IHRD+KA+NVLL + K++DFG A Q N GT +M
Sbjct: 117 LDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWM 171
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
APE + K+D++S G+ +E+ G
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGE 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 14/216 (6%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEV 263
PLG + E +F K+G+G +G VYK G+ +A+K++ T +G+ E+
Sbjct: 2 PLG-SPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIIN 322
+L+ +L H N+V+ ++E++ D+ F DA+ + S +
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 117
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ + H +++HRDLK N+L++ + K++DFG AR FG ++
Sbjct: 118 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-- 172
Query: 383 TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
T Y APE +G +S D++S G + E+++ R
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 252
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 253 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 295
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 253
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 254 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 296
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V G+ +AVK + Q + NEV ++ QH N+V
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D V+L+ ++ ++ + + + YLH +IH
Sbjct: 112 LVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A+I +++ + GT +MAPE +++ +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YFS+
Sbjct: 222 VDIWSLGIMVIEMVDGEPP---YFSD 244
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 249
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 250 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 292
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAK 268
+++ F+ K+G+G FG V+KG K +A+K + + +++ + E+ ++++
Sbjct: 22 SMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ 81
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+ + I EY+ S D LD + +I+ I +G+
Sbjct: 82 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGL 137
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH + + IHRD+KA+NVLL + K++DFG A Q + NT GT +MA
Sbjct: 138 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMA 192
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
PE + K+D++S G+ +E+ G
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGE 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 260
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 261 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 123/292 (42%), Gaps = 53/292 (18%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR--------------SVQLDWKR 316
HKN++ I EY +L +L A R QL K
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL-QARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTY 434
T +MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-------- 301
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 302 LFKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 344
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRLSR-TSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 317
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 318 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 356
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGTYGYM 387
YL+ K +HRDL A N ++ D KI DFG R I+ + + + +M
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 199
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
APE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQ 253
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 254 PD-----NC-PERVTDLMR---MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
H N+V+ ++E++ D DA+ + S + + +G+ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKD--FMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPE 173
Query: 391 YAMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXXX 279
K+G+G +G VYK G+ A+K++ +G+ E++++ +L+H N+V+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 280 XXXXXXXXXXIYEYMPN---KSLDV---HLFDATRSVQLDWKRRLSIINGIARGILYLHE 333
++E++ K LDV L T L L ++NGIA Y H+
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHD 118
Query: 334 DSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
+++HRDLK N+L++ + KI+DFG AR FG + I+ T Y AP+ M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLM 173
Query: 394 GG-IFSIKSDVFSFGVLLLEIISG 416
G +S D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 126
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 127 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 33/279 (11%)
Query: 217 HFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLS---RTSGQGLKEFKNEVNLIAKLQHK 272
+F E K+G+G F VY+ L DG +A+K++ + + E++L+ +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLD---VHLFDATRSV--QLDWKRRLSIINGIARG 327
N+++ + E L H R + + WK + + + +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE-- 150
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYM 387
H SR +++HRD+K +NV + K+ D G R F A++ + GT YM
Sbjct: 151 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYM 203
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
+PE ++ KSD++S G LL E+ + + + FY G + Y+ C+ +E
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFY----GDKMNLYS---LCK--KIEQ 252
Query: 448 ID-PVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSV 485
D P L +EL + ++ +C+ DP RP ++ V
Sbjct: 253 CDYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 125/291 (42%), Gaps = 51/291 (17%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEV------NLIAKLQ------- 270
LG+G FG V LA+ + + +R + +K K++ +LI++++
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATRS--VQLDWKRR 317
HKN++ I EY +L +L ++ + + QL K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT 377
+S +ARG+ YL + K IHRDL A NVL+ +D KI+DFG AR T
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 378 NIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYT 435
+MAPE I++ +SDV+SFGVLL EI + G G E
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------L 261
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
+KL EGH ++ K S +EL + C P+ RPT +V
Sbjct: 262 FKLLKEGHRMD------KPSNCTNELYMMMRD---CWHAVPSQRPTFKQLV 303
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 129
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 130 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 32/284 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YL+ K +HRDL A N ++ D KI DFG R +MA
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELI 448
PE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQP 254
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 255 D-----NC-PERVTDLMR---MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 127
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 128 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKE--FKNEVNLIAKLQHKNLVRXXXX 280
+G G +G K +DGK + K L S ++ +EVNL+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 281 X--XXXXXXXXIYEYMPNKSLDVHLFDATRSVQ-LDWKRRLSIINGIARGILYLHE--DS 335
+ EY L + T+ Q LD + L ++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
++HRDLK +NV LD N K+ DFG ARI + + A T GT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGTPYYMSPEQMNRM 191
Query: 396 IFSIKSDVFSFGVLLLEI 413
++ KSD++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 258
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 259 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 297
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 129
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 130 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMAPEYAMGGIFSI 399
RDL A N L++D K+SDFG +R ++ T+ + + + PE M FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---ETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 400 KSDVFSFGVLLLEIIS 415
KSD+++FGVL+ EI S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 125
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 126 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 127
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 128 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 145
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 13/203 (6%)
Query: 221 ENKLGQGGFGPVYKGTLA-DGKA---IAVKRL-SRTSGQGLKEFKNEVNLIAKLQHKNLV 275
E +G G FG V G L GK +A+K L S + + ++F +E +++ + H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I E+M N SLD L Q + + ++ GIA G+ YL +
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYLAD-- 127
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN-TNIIAGT--YGYMAPEYA 392
+ +HR L A N+L++ ++ K+SDFG +R + + T+ + G + APE
Sbjct: 128 -MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 393 MGGIFSIKSDVFSFGVLLLEIIS 415
F+ SDV+S+G+++ E++S
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AVK + +T + L++ EV ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY + +L R + K + I + Y H+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGIFS- 398
HRDLKA N+LLD DMN KI+DFG + F GN+ + G+ Y APE G +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDG 191
Query: 399 IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 143
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 127
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 128 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AVK + +T + L++ EV ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY + +L R + K + I + Y H+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGIFS- 398
HRDLKA N+LLD DMN KI+DFG + F GN+ + G+ Y APE G +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDG 191
Query: 399 IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 128
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 129 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 263
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 264 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 302
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 52 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 167
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPP 176
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 237 LISRLLKHNPSQRPMLREV 255
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQY--LLNWCVQ 126
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 127 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 125
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 126 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 140
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGTYGYM 387
YL+ K +HRDL A N ++ D KI DFG R I+ + + + +M
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 198
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
APE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQ 252
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 253 PD-----NC-PERVTDLMR---MCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 3 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 119
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 120 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 260
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 261 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 299
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 146
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 125
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 126 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 125
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 126 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AVK + +T + L++ EV ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY + +L R + K + I + Y H+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGIFS- 398
HRDLKA N+LLD DMN KI+DFG + F GN+ A G Y APE G +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAPELFQGKKYDG 191
Query: 399 IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 128
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 129 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 51 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ Y
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKY 166
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
K+GQG G VY +A G+ +A+++++ + NE+ ++ + ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY+ SL D +D + ++ + + +LH + ++I
Sbjct: 86 YLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRD+K+ N+LL D + K++DFG Q++ +T + GT +MAPE + K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 196
Query: 401 SDVFSFGVLLLEIISGR 417
D++S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEGE 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 132
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 133 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 128
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 129 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMAPEYAMGGIFSI 399
RDL A N L++D K+SDFG +R ++ T+ + + + PE M FS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 400 KSDVFSFGVLLLEIIS 415
KSD+++FGVL+ EI S
Sbjct: 185 KSDIWAFGVLMWEIYS 200
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXXX 279
K+G+G +G VYK G+ A+K++ +G+ E++++ +L+H N+V+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 280 XXXXXXXXXXIYEYMPN---KSLDV---HLFDATRSVQLDWKRRLSIINGIARGILYLHE 333
++E++ K LDV L T L L ++NGIA Y H+
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHD 118
Query: 334 DSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
+++HRDLK N+L++ + KI+DFG AR FG + ++ T Y AP+ M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLM 173
Query: 394 GG-IFSIKSDVFSFGVLLLEIISG 416
G +S D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 132
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 133 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 127
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 128 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 127
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 128 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 23/204 (11%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXXX 279
K+G+G +G VYK G+ A+K++ +G+ E++++ +L+H N+V+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 280 XXXXXXXXXXIYEYMPN---KSLDV---HLFDATRSVQLDWKRRLSIINGIARGILYLHE 333
++E++ K LDV L T L L ++NGIA Y H+
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHD 118
Query: 334 DSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
+++HRDLK N+L++ + KI+DFG AR FG + ++ T Y AP+ M
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLM 173
Query: 394 GG-IFSIKSDVFSFGVLLLEIISG 416
G +S D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 15 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 74
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 131
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 132 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 218 FSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV 275
F+ ++G+G FG V+KG + +A+K + + +++ + E+ ++++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ I EY+ S D R+ D + +++ I +G+ YLH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIATMLKEILKGLDYLHSEK 140
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
+ IHRD+KA+NVLL + + K++DFG A Q + NT GT +MAPE
Sbjct: 141 K---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQS 195
Query: 396 IFSIKSDVFSFGVLLLEIISGRKNN 420
+ K+D++S G+ +E+ G N
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPN 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 128
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 129 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I EY +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ +I+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKE--FKNEVNLIAKLQHKNLVRXXXX 280
+G G +G K +DGK + K L S ++ +EVNL+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 281 X--XXXXXXXXIYEYMPNKSLDVHLFDATRSVQ-LDWKRRLSIINGIARGILYLHE--DS 335
+ EY L + T+ Q LD + L ++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
++HRDLK +NV LD N K+ DFG ARI N + + GT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 396 IFSIKSDVFSFGVLLLEI 413
++ KSD++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEV 263
PLG + +F K+G+G +G VYK G+ +A+K++ T +G+ E+
Sbjct: 2 PLG----SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 57
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIIN 322
+L+ +L H N+V+ ++E++ D+ F DA+ + S +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 114
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ + H +++HRDLK N+L++ + K++DFG AR FG ++
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 169
Query: 383 TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
T Y APE +G +S D++S G + E+++ R
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 19 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 78
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 135
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 136 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEV 263
PLG + +F K+G+G +G VYK G+ +A+K++ T +G+ E+
Sbjct: 1 PLG----SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 56
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIIN 322
+L+ +L H N+V+ ++E++ D+ F DA+ + S +
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLF 113
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ + H +++HRDLK N+L++ + K++DFG AR FG ++
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 168
Query: 383 TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
T Y APE +G +S D++S G + E+++ R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P + L ++ D +R + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 241 LISRLLKHNPSQRPMLREV 259
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY + K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H K+IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 236 LISRLLKHNPSQRPMLR 252
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + ++GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPP 176
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 237 LISRLLKHNPSQRPMLREV 255
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQY--LLNWCVQ 125
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 126 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 17/249 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L ++ G++ + + EV + + L+H N++R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I EY P L + + + D +R + I +A + Y H ++
Sbjct: 102 YFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RV 155
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+LL KI+DFG + + + + GT Y+ PE G +
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 211
Query: 400 KSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSC 456
K D++S GVL E + G+ + N + + + + +T+ + A +LI +LK +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 271
Query: 457 APDELLKFI 465
+ +L+ +
Sbjct: 272 SQRPMLREV 280
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 241 LISRLLKHNPSQRPMLREV 259
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 224 LGQGGFGPV----YKGTLAD-GKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V Y + G+ +AVK L + G + + K E+ ++ L H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 278 XXXXXXX--XXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I E++P+ SL +L + L K++L I +G+ YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYL--GS 132
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMG 394
R + +HRDL A NVL++ + KI DFG T I + + + APE M
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 395 GIFSIKSDVFSFGVLLLEIIS 415
F I SDV+SFGV L E+++
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKE--FKNEVNLIAKLQHKNLVRXXXX 280
+G G +G K +DGK + K L S ++ +EVNL+ +L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 281 --XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ-LDWKRRLSIINGIARGILYLHE--DS 335
+ EY L + T+ Q LD + L ++ + + H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
++HRDLK +NV LD N K+ DFG ARI +++ A GT YM+PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPEQMNRM 191
Query: 396 IFSIKSDVFSFGVLLLEI 413
++ KSD++S G LL E+
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 34 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 93
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 150
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 151 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + G+ +A+K + +T + L++ EV ++ L H N+V+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I EY + +L R + K S I + Y H+ +I+
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQK---RIV 133
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
HRDLKA N+LLD DMN KI+DFG + F GG + G+ Y APE G +
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGG-----KLDTFCGSPPYAAPELFQGKKYD 188
Query: 399 -IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 189 GPEVDVWSLGVILYTLVSG 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
LG+G +G VY G L++ IA+K + + + E+ L L+HKN+V+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
E +P SL L ++ + + I G+ YLH++ +I+HR
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHR 146
Query: 343 DLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI--FSI 399
D+K NVL++ KISDFGT++ G T GT YMAPE G +
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 400 KSDVFSFGVLLLEIISGR 417
+D++S G ++E+ +G+
Sbjct: 205 AADIWSLGCTIIEMATGK 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 239 LISRLLKHNPSQRPMLREV 257
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMAPEYAMGGIFSI 399
RDL A N L++D K+SDFG +R ++ T+ + + + PE M FS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 400 KSDVFSFGVLLLEIIS 415
KSD+++FGVL+ EI S
Sbjct: 186 KSDIWAFGVLMWEIYS 201
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 222 NKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
KLG+G +G VYK + G+ +A+K++ S L+E E++++ + ++V+
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY S V R+ L +I+ +G+ YLH ++ I
Sbjct: 93 YFKNTDLWIVMEYCGAGS--VSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKI 147
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HRD+KA N+LL+ + + K++DFG A A N + GT +MAPE ++
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 401 SDVFSFGVLLLEIISGR 417
+D++S G+ +E+ G+
Sbjct: 206 ADIWSLGITAIEMAEGK 222
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMAPEYAMGGIFSI 399
RDL A N L++D K+SDFG +R ++ T+ + + + PE M FS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 400 KSDVFSFGVLLLEIIS 415
KSD+++FGVL+ EI S
Sbjct: 201 KSDIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMAPEYAMGGIFSI 399
RDL A N L++D K+SDFG +R ++ T+ + + + PE M FS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 400 KSDVFSFGVLLLEIIS 415
KSD+++FGVL+ EI S
Sbjct: 181 KSDIWAFGVLMWEIYS 196
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 224 LGQGGFGPV----YKGTLAD-GKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V Y + G+ +AVK L + G + + K E+ ++ L H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 278 XX--XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I E++P+ SL +L + L K++L I +G+ YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL--KQQLKYAVQICKGMDYL--GS 144
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMG 394
R + +HRDL A NVL++ + KI DFG T I + + + APE M
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 395 GIFSIKSDVFSFGVLLLEIIS 415
F I SDV+SFGV L E+++
Sbjct: 204 SKFYIASDVWSFGVTLHELLT 224
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 179
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 239
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 240 LISRLLKHNPSQRPMLR 256
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAP 173
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + G+ +A+K + +T + L++ EV ++ L H N+V+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I EY + +L R + K S I + Y H+ +I+
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQK---RIV 136
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
HRDLKA N+LLD DMN KI+DFG + F GG + G Y APE G +
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGG-----KLDAFCGAPPYAAPELFQGKKYD 191
Query: 399 -IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 GPEVDVWSLGVILYTLVSG 210
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
+G+G FG V G G +AVK + + + F E +++ +L+H NLV+
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 284 XXXXXXIY-EYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
I EYM SL +L RSV L L + + YL ++ +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 343 DLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSD 402
DL A NVL+ +D K+SDFG + Q+ + + APE FS KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREAAFSTKSD 187
Query: 403 VFSFGVLLLEIIS 415
V+SFG+LL EI S
Sbjct: 188 VWSFGILLWEIYS 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 218 FSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV 275
F+ K+G+G FG V+KG K +A+K + + +++ + E+ ++++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ I EY+ S D LD + +I+ I +G+ YLH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
+ IHRD+KA+NVLL + K++DFG A Q N GT +MAPE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 396 IFSIKSDVFSFGVLLLEIISGR 417
+ K+D++S G+ +E+ G
Sbjct: 195 AYDSKADIWSLGITAIELARGE 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMAPEYAMGGIFSI 399
RDL A N L++D K+SDFG +R ++ T+ + + + PE M FS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 400 KSDVFSFGVLLLEIIS 415
KSD+++FGVL+ EI S
Sbjct: 192 KSDIWAFGVLMWEIYS 207
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 173
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 24/266 (9%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +AVK + S EF E + KL H LV+
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ EY+ N L +L + L+ + L + + G+ +L + IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L+D D+ K+SDFG R +Q ++ + APE +S KS
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV-KWSAPEVFHYFKYSSKS 186
Query: 402 DVFSFGVLLLEIIS-GRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDE 460
DV++FG+L+ E+ S G+ Y + + +L + +GH L P L A D
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLY--TNSEVVLKVS-----QGH--RLYRPHL----ASDT 233
Query: 461 LLKFIHIGLLCVQQDPADRPTMSSVV 486
+ + ++ C + P RPT ++
Sbjct: 234 IYQIMYS---CWHELPEKRPTFQQLL 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 174
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 234
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 235 LISRLLKHNPSQRPMLR 251
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 174
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 174
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 173
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AV+ + +T + L++ EV ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY + +L R + K + I + Y H+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGIFS- 398
HRDLKA N+LLD DMN KI+DFG + F GN+ + G+ Y APE G +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKKYDG 191
Query: 399 IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 220 DENK----LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
DEN LG+G +G VY G L++ IA+K + + + E+ L L+HKN+
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI 67
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
V+ E +P SL L ++ + + I G+ YLH++
Sbjct: 68 VQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 335 SRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
+I+HRD+K NVL++ KISDFGT++ G T GT YMAPE
Sbjct: 128 ---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIID 182
Query: 394 GGI--FSIKSDVFSFGVLLLEIISGR 417
G + +D++S G ++E+ +G+
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 17/249 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L ++ G++ + + EV + + L+H N++R
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I EY P L + + + D +R + I +A + Y H ++
Sbjct: 93 YFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RV 146
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+LL KI+DFG + + + + GT Y+ PE G +
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 202
Query: 400 KSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSC 456
K D++S GVL E + G+ + N + + + + +T+ + A +LI +LK +
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 262
Query: 457 APDELLKFI 465
+ +L+ +
Sbjct: 263 SQRPMLREV 271
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
K+GQG G VY +A G+ +A+++++ + NE+ ++ + ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY+ SL D +D + ++ + + +LH + ++I
Sbjct: 86 YLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 341 HRDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
HRD+K+ N+LL D + K++DFG A+I Q+ + + GT +MAPE +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 400 KSDVFSFGVLLLEIISGR 417
K D++S G++ +E+I G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 17/249 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L ++ G++ + + EV + + L+H N++R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I EY P L + + + D +R + I +A + Y H ++
Sbjct: 102 YFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RV 155
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+LL KI+DFG + + + + + GT Y+ PE G +
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDE 211
Query: 400 KSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSC 456
K D++S GVL E + G+ + N + + + + +T+ + A +LI +LK +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 271
Query: 457 APDELLKFI 465
+ +L+ +
Sbjct: 272 SQRPMLREV 280
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 214 ATNHFSDENK----LGQGGFGPVY--KGTLADGKAIAVKRLSRTSGQGLKEFKN---EVN 264
+T FSD K LG+G FG V K + G+ AVK +S+ + + ++ EV
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
L+ +L H N+++ + E L + R ++D R II +
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQV 141
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIA 381
GI Y+H++ KI+HRDLK N+LL+ D N +I DFG + F ++ +
Sbjct: 142 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 195
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+APE + G + K DV+S GV+L ++SG
Sbjct: 196 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P + L + + D +R + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL---QKLSKFDEQRTATYITELANALS 127
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPP 180
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 241 LISRLLKHNPSQRPMLREV 259
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F LG G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 6 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 65
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 122
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 123 IAEGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 236 LISRLLKHNPSQRPMLR 252
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQGLK---EFKNEVNLIAKLQHK 272
H+ + LG G FG V G G +AVK L+R + L + + E+ + +H
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDAT-RSVQLDWKRRLSIINGIARGILYL 331
++++ + EY+ L FD ++ +LD K + I G+ Y
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H R ++HRDLK NVLLD MN KI+DFG + + + + G+ Y APE
Sbjct: 133 H---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEV 186
Query: 392 AMGGIFS-IKSDVFSFGVLLLEIISG 416
G +++ + D++S GV+L ++ G
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 35/281 (12%)
Query: 224 LGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQ-GLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+G G V A K +A+KR++ Q + E E+ +++ H N+V
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 77
Query: 282 XXXXXXXXIYEYMPNKS-LDV--HLF--DATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ + + S LD+ H+ +S LD +I+ + G+ YLH++ +
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGN--QNQANTNIIAGTYGYMAPEYA 392
IHRD+KA N+LL +D + +I+DFG + GG+ +N+ + GT +MAPE
Sbjct: 138 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPE-V 192
Query: 393 MGGI--FSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
M + + K+D++SFG+ +E+ +G Y +L T ++ P
Sbjct: 193 MEQVRGYDFKADIWSFGITAIELATG---AAPYHKYPPMKVLMLT---------LQNDPP 240
Query: 451 VLKQSCAPDELLK-----FIHIGLLCVQQDPADRPTMSSVV 486
L+ E+LK F + LC+Q+DP RPT + ++
Sbjct: 241 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 239 LISRLLKHNPSQRPMLR 255
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
K+GQG G VY +A G+ +A+++++ + NE+ ++ + ++ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY+ SL D +D + ++ + + +LH + ++I
Sbjct: 87 YLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 341 HRDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
HRD+K+ N+LL D + K++DFG A+I Q+ + + GT +MAPE +
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 400 KSDVFSFGVLLLEIISGR 417
K D++S G++ +E+I G
Sbjct: 197 KVDIWSLGIMAIEMIEGE 214
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 178
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 173
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 35/281 (12%)
Query: 224 LGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQ-GLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+G G V A K +A+KR++ Q + E E+ +++ H N+V
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82
Query: 282 XXXXXXXXIYEYMPNKS-LDV--HLF--DATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ + + S LD+ H+ +S LD +I+ + G+ YLH++ +
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGN--QNQANTNIIAGTYGYMAPEYA 392
IHRD+KA N+LL +D + +I+DFG + GG+ +N+ + GT +MAPE
Sbjct: 143 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV-GTPCWMAPE-V 197
Query: 393 MGGI--FSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
M + + K+D++SFG+ +E+ +G Y +L T ++ P
Sbjct: 198 MEQVRGYDFKADIWSFGITAIELATG---AAPYHKYPPMKVLMLT---------LQNDPP 245
Query: 451 VLKQSCAPDELLK-----FIHIGLLCVQQDPADRPTMSSVV 486
L+ E+LK F + LC+Q+DP RPT + ++
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 174
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 174
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ARG+ +L S K IHRDL A N+LL ++ KI DFG AR N +
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE I+S KSDV+S+GVLL EI S G G E + L ++
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRM--- 321
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLA 490
A E P + Q I L C +DP +RP + +V L
Sbjct: 322 -RAPEYSTPEIYQ------------IMLDCWHRDPKERPRFAELVEKLG 357
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 115/238 (48%), Gaps = 20/238 (8%)
Query: 191 LRGGEQQAESQEFPLFPLG-------LALEATNHFSDENKLGQGGFGPVYKGT-LADGKA 242
LR Q+ E E PL P G L + F LG G FG VYKG + +G+
Sbjct: 18 LRRLLQERELVE-PLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEK 76
Query: 243 I----AVKRLSR-TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNK 297
+ A+ L TS + KE +E ++A + + ++ R I + MP
Sbjct: 77 VKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFG 135
Query: 298 SLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNP 357
L ++ + ++ + L+ IA+G+ YL ED RL +HRDL A NVL+ +
Sbjct: 136 CLLDYVREHKDNIGSQY--LLNWCVQIAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHV 190
Query: 358 KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
KI+DFG A++ G + + + +MA E + I++ +SDV+S+GV + E+++
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 177
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 237
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 238 LISRLLKHNPSQRPMLREV 256
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
+G+G FG V G G +AVK + + + F E +++ +L+H NLV+
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 284 XXXXXXIY-EYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
I EYM SL +L RSV L L + + YL ++ +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 343 DLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSD 402
DL A NVL+ +D K+SDFG + Q+ + + APE FS KSD
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFSTKSD 368
Query: 403 VFSFGVLLLEIIS 415
V+SFG+LL EI S
Sbjct: 369 VWSFGILLWEIYS 381
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 224 LGQGGFGPVYKGTL--ADGKA----IAVKRLSR-TSGQGLKEFKNEVNLIAKLQHKNLVR 276
LG+G FG V K T G+A +AVK L S L++ +E N++ ++ H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-------------SVQLDWKRRLSIING 323
I EY SL L ++ + S LD ++ G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 324 --------IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQA 375
I++G+ YL E +K++HRDL A N+L+ + KISDFG +R +
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 376 NTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYT 435
+ +MA E I++ +SDV+SFGVLL EI++ N Y + L
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPERLFN-- 263
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSV 485
L GH +E D +C+ +E+ + + L C +Q+P RP + +
Sbjct: 264 --LLKTGHRMERPD-----NCS-EEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 178
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 239 LISRLLKHNPSQRPMLREV 257
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 173
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 172
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 232
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 233 LISRLLKHNPSQRPMLR 249
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 176
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 237 LISRLLKHNPSQRPMLREV 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 236 LISRLLKHNPSQRPMLR 252
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEI 175
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 92 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 207
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 46/290 (15%)
Query: 224 LGQGGFGPVYKGTL--ADGKA----IAVKRLSR-TSGQGLKEFKNEVNLIAKLQHKNLVR 276
LG+G FG V K T G+A +AVK L S L++ +E N++ ++ H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-------------SVQLDWKRRLSIING 323
I EY SL L ++ + S LD ++ G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 324 --------IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQA 375
I++G+ YL E +K++HRDL A N+L+ + KISDFG +R +
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 376 NTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYT 435
+ +MA E I++ +SDV+SFGVLL EI++ N Y + L
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPERLFN-- 263
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSV 485
L GH +E D +C+ +E+ + + L C +Q+P RP + +
Sbjct: 264 --LLKTGHRMERPD-----NCS-EEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 236 LISRLLKHNPSQRPMLREV 254
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 146
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 175
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 236 LISRLLKHNPSQRPMLR 252
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 38 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 153
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I Y +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLA-DGKAI--AVKRLSR-TSGQGLKEFKNEVNLIAKL-Q 270
N ++ +G+G FG V K + DG + A+KR+ S ++F E+ ++ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLD--------------WKR 316
H N++ EY P+ +L + +R ++ D ++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNL-LDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
L +ARG+ YL S+ + IHRDL A N+L+ ++ KI+DFG +R G +
Sbjct: 134 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVK 187
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTY 434
+ +MA E +++ SDV+S+GVLL EI+S G G +E + L
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL--- 244
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+G+ +E K DE+ + C ++ P +RP+ + ++V L
Sbjct: 245 -----PQGYRLE------KPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSL 285
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG V G +A+K + S EF E ++ L H+ LV+
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
I EYM N L +L + Q ++ L + + + YL + +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDL A N L++D K+SDFG +R ++ ++ + PE M FS KS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG-SKFPVRWSPPEVLMYSKFSSKS 187
Query: 402 DVFSFGVLLLEIIS 415
D+++FGVL+ EI S
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 221 ENKLGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRX 277
+ +G+G F V + G+ +AVK + +T + L++ EV ++ L H N+V+
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ EY + +L R + K + I + Y H+
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKY-- 134
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGI 396
I+HRDLKA N+LLD DMN KI+DFG + F GN+ + G+ Y APE G
Sbjct: 135 -IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK----LDTFCGSPPYAAPELFQGKK 189
Query: 397 FS-IKSDVFSFGVLLLEIISG 416
+ + DV+S GV+L ++SG
Sbjct: 190 YDGPEVDVWSLGVILYTLVSG 210
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 217 HFSDENKLGQGGFGPVYKGTLAD--GKAI--AVKRLSRTSGQG-LKEFKNEVNLIAKLQH 271
HF++ +G+G FG VY GTL D GK I AVK L+R + G + +F E ++ H
Sbjct: 34 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 272 KNLVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ + YM + L + + T + + K + +A+G+ +
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY--GYMA 388
L + K +HRDL A N +LD+ K++DFG AR + + N +MA
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIIS 415
E F+ KSDV+SFGVLL E+++
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 178
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 239 LISRLLKHNPSQRPMLR 255
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AV+ + +T + L++ EV ++ L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY + +L R + K + I + Y H+ I+
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKFRQIVSAVQYCHQKF---IV 135
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGIFS- 398
HRDLKA N+LLD DMN KI+DFG + F GN+ + G+ Y APE G +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDEFCGSPPYAAPELFQGKKYDG 191
Query: 399 IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
K+GQG G VY +A G+ +A+++++ + NE+ ++ + ++ N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY+ SL D +D + ++ + + +LH + ++I
Sbjct: 86 YLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 341 HRDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
HRD+K+ N+LL D + K++DFG A+I Q+ + + GT +MAPE +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 400 KSDVFSFGVLLLEIISGR 417
K D++S G++ +E+I G
Sbjct: 196 KVDIWSLGIMAIEMIEGE 213
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQG--LKEFKNEVNLIAKLQHKNLVRXXXX 280
LG+G FG V K + AVK +++ S + EV L+ KL H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ E L + R + D R II + GI Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 341 HRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
HRDLK N+LL+ D + KI DFG + F N + GT Y+APE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGTY 199
Query: 398 SIKSDVFSFGVLLLEIISG 416
K DV+S GV+L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI+DFG + + + + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 180
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 241 LISRLLKHNPSQRPMLREV 259
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
+G+G FG V G G +AVK + + + F E +++ +L+H NLV+
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 284 XXXXXXIY-EYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
I EYM SL +L RSV L L + + YL ++ +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 343 DLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSD 402
DL A NVL+ +D K+SDFG + Q+ + + APE FS KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFSTKSD 196
Query: 403 VFSFGVLLLEIIS 415
V+SFG+LL EI S
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGTYGYM 387
YL+ K +HR+L A N ++ D KI DFG R I+ + + + +M
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 199
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
APE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQ 253
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 254 PD-----NC-PERVTDLMR---MCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQG--LKEFKNEVNLIAKLQHKNLVRXXXX 280
LG+G FG V K + AVK +++ S + EV L+ KL H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ E L + R + D R II + GI Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 341 HRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
HRDLK N+LL+ D + KI DFG + F N + GT Y+APE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGTY 199
Query: 398 SIKSDVFSFGVLLLEIISG 416
K DV+S GV+L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 224 LGQGGFG--------PVYKGTLADGKAIAVKRLSRTSG-QGLKEFKNEVNLIAKLQHKNL 274
LG+G FG P GT G+ +AVK L +G Q +K E++++ L H+++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 275 VRXXX--XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
++ + EY+P SL +L S+ L + L I G+ YLH
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH 151
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPE 390
IHRDL A NVLLD+D KI DFG A+ G + + + + Y APE
Sbjct: 152 AQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APE 207
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIIS 415
F SDV+SFGV L E+++
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 34/285 (11%)
Query: 223 KLGQGGFGPVYKGTLAD---GKA---IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLV 275
+LGQG FG VY+G D G+A +AVK ++ ++ + EF NE +++ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR-------RLSIINGIARGI 328
R + E M + L +L + + R + + IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGNQNQANTNIIAGTYGYM 387
YL+ K +HR+L A N ++ D KI DFG R I+ + + + +M
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-WM 200
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
APE G+F+ SD++SFGV+L EI S + Y + +L + +G ++
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQP--YQGLSNEQVLKFV----MDGGYLDQ 254
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASD 492
D +C P+ + + +C Q +P RPT +V +L D
Sbjct: 255 PD-----NC-PERVTDLMR---MCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLA-DGKAI--AVKRLSR-TSGQGLKEFKNEVNLIAKL-Q 270
N ++ +G+G FG V K + DG + A+KR+ S ++F E+ ++ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLD--------------WKR 316
H N++ EY P+ +L + +R ++ D ++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNL-LDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
L +ARG+ YL S+ + IHRDL A N+L+ ++ KI+DFG +R G +
Sbjct: 144 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVK 197
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTY 434
+ +MA E +++ SDV+S+GVLL EI+S G G +E + L
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL--- 254
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+G+ +E K DE+ + C ++ P +RP+ + ++V L
Sbjct: 255 -----PQGYRLE------KPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSL 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
+G+G FG V G G +AVK + + + F E +++ +L+H NLV+
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 284 XXXXXXIY-EYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHR 342
I EYM SL +L RSV L L + + YL ++ +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 343 DLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSD 402
DL A NVL+ +D K+SDFG + Q+ + + APE FS KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV-----KWTAPEALREKKFSTKSD 181
Query: 403 VFSFGVLLLEIIS 415
V+SFG+LL EI S
Sbjct: 182 VWSFGILLWEIYS 194
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
K+GQG G VY +A G+ +A+++++ + NE+ ++ + ++ N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY+ SL D +D + ++ + + +LH + ++I
Sbjct: 87 YLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
HR++K+ N+LL D + K++DFG Q++ +T + GT +MAPE + K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 197
Query: 401 SDVFSFGVLLLEIISGR 417
D++S G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEGE 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AVK + +T + L++ EV ++ L H N+V+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDW---KRRLSIINGIARGILYLHEDSRL 337
+ EY + FD V W K + I + Y H+
Sbjct: 75 IETEKTLYLVMEYASGGEV----FDYL--VAHGWMKEKEARAKFRQIVSAVQYCHQKF-- 126
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGI 396
I+HRDLKA N+LLD DMN KI+DFG + F GN+ + G+ Y APE G
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK----LDTFCGSPPYAAPELFQGKK 181
Query: 397 FS-IKSDVFSFGVLLLEIISG 416
+ + DV+S GV+L ++SG
Sbjct: 182 YDGPEVDVWSLGVILYTLVSG 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 214 ATNHFSDENK----LGQGGFGPVY--KGTLADGKAIAVKRLSRTSGQGLKEFKN---EVN 264
+T FSD K LG+G FG V K + G+ AVK +S+ + + ++ EV
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
L+ +L H N+++ + E L + R ++D R II +
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQV 135
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIA 381
GI Y+H++ KI+HRDLK N+LL+ D N +I DFG + F ++ +
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 189
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+APE + G + K DV+S GV+L ++SG
Sbjct: 190 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQ 270
+ +F K+G+G +G VYK G+ +A+K++ T +G+ E++L+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGIL 329
H N+V+ ++E++ D+ F DA+ + S + + +G+
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+ H +++HRDLK N+L++ + K++DFG AR FG ++ T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 390 EYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
E +G +S D++S G + E+++ R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 14/198 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L ++ G++ + + EV + + L+H N++R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
I EY P L + + + D +R + I +A + Y H ++
Sbjct: 81 YFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RV 134
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+LL KI+DFG + + + + GT Y+ PE G
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 400 KSDVFSFGVLLLEIISGR 417
K D++S GVL E + G+
Sbjct: 191 KVDLWSLGVLCYEFLVGK 208
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+GGFG V++ D A+KR+ + + +E EV +AKL+H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDW---------KRR---LSIINGIARGIL 329
+ P L + + + DW + R L I IA +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIA-------- 381
+LH ++HRDLK SN+ D K+ DFG + +Q++ ++
Sbjct: 133 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTVLTPMPAYARH 187
Query: 382 ----GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEII 414
GT YM+PE G +S K D+FS G++L E++
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXX 284
+G FG V+K L + + +AVK Q + + EV + ++H+N+++
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRG 90
Query: 285 XXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED-------SRL 337
+ L D ++ + W I +ARG+ YLHED +
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
I HRD+K+ NVLL +++ I+DFG A F ++ +T+ GT YMAPE G I
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN 210
Query: 397 FS----IKSDVFSFGVLLLEIIS 415
F ++ D+++ G++L E+ S
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 224 LGQGGFGPVY--------KGTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAKL-QHKN 273
LG+G FG V K + +AVK L + + L + +E+ ++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATR--SVQLDWKRRLSI 320
++ I Y +L +L +D R Q+ +K +S
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 321 INGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII 380
+ARG+ YL + K IHRDL A NVL+ ++ KI+DFG AR T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI--ISGRKNNGFYFSEHGQTLLTYTWKL 438
+MAPE +++ +SDV+SFGVL+ EI + G G E +KL
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------LFKL 271
Query: 439 WCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
EGH ++ K + +EL + C P+ RPT +V
Sbjct: 272 LKEGHRMD------KPANCTNELYMMMRD---CWHAVPSQRPTFKQLV 310
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 98 ------------YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE S SD+++ G ++ ++++G
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F L G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 132
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 133 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + A L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F L G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 9 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 125
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 126 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 17/259 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI++FG + + + + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 177
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 237
Query: 447 LIDPVLKQSCAPDELLKFI 465
LI +LK + + +L+ +
Sbjct: 238 LISRLLKHNPSQRPMLREV 256
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 12/212 (5%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGT-LADGKAI----AVKRLSR-TSGQGLKEFKNEV 263
L + F L G FG VYKG + +G+ + A+K L TS + KE +E
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++A + + ++ R I + MP L ++ + ++ + L+
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQY--LLNWCVQ 132
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
IA+G+ YL ED RL +HRDL A NVL+ + KI+DFG A++ G + + +
Sbjct: 133 IAKGMNYL-EDRRL--VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MA E + I++ +SDV+S+GV + E+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG VYK + A+A ++ T S + L+++ E+ ++A H +V+
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATR-----SVQLDWKRRLSIINGIARGILYLHEDSR 336
+ E+ P ++D + + R +Q+ ++ L +N +LH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN-------FLHSK-- 128
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
+IIHRDLKA NVL+ + + +++DFG + + ++ I GT +MAPE M
Sbjct: 129 -RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCET 185
Query: 397 -----FSIKSDVFSFGVLLLEI 413
+ K+D++S G+ L+E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 214 ATNHFSDENK----LGQGGFGPVY--KGTLADGKAIAVKRLSRTSGQGLKEFKN---EVN 264
+T FSD K LG+G FG V K + G+ AVK +S+ + + ++ EV
Sbjct: 43 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
L+ +L H N+++ + E L + R ++D R II +
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQV 158
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIA 381
GI Y+H++ KI+HRDLK N+LL+ D N +I DFG + F ++ +
Sbjct: 159 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 212
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+APE + G + K DV+S GV+L ++SG
Sbjct: 213 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 214 ATNHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKL 269
A F LG+G FG VY K I A+K L ++ G++ + + EV + + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
+H N++R I EY P L + + + D +R + I +A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
Y H ++IHRD+K N+LL KI++FG + + + + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVE 446
E G + K D++S GVL E + G+ + N + + + + +T+ + A +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
Query: 447 LIDPVLKQSCAPDELLK 463
LI +LK + + +L+
Sbjct: 239 LISRLLKHNPSQRPMLR 255
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 214 ATNHFSDENK----LGQGGFGPVY--KGTLADGKAIAVKRLSRTSGQGLKEFKN---EVN 264
+T FSD K LG+G FG V K + G+ AVK +S+ + + ++ EV
Sbjct: 44 STAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
L+ +L H N+++ + E L + R ++D R II +
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQV 159
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIA 381
GI Y+H++ KI+HRDLK N+LL+ D N +I DFG + F ++ +
Sbjct: 160 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---I 213
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+APE + G + K DV+S GV+L ++SG
Sbjct: 214 GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGL--KEFKNEVNLI 266
L ++ + + +G+G +G V K D G+ +A+K+ + + K E+ L+
Sbjct: 19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSVQLDWKRRLSIINGIA 325
+L+H+NLV ++E++ + LD + LF Q+ K IINGI
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI- 137
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG 385
G + H IIHRD+K N+L+ K+ DFG AR + + T
Sbjct: 138 -GFCHSH-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRW 189
Query: 386 YMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
Y APE +G + + DV++ G L+ E+ G
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 23/202 (11%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
+LG G FG VYK + A+A ++ T S + L+++ E+ ++A H +V+
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATR-----SVQLDWKRRLSIINGIARGILYLHEDSR 336
+ E+ P ++D + + R +Q+ ++ L +N +LH
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN-------FLHSK-- 136
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
+IIHRDLKA NVL+ + + +++DFG + + ++ I GT +MAPE M
Sbjct: 137 -RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCET 193
Query: 397 -----FSIKSDVFSFGVLLLEI 413
+ K+D++S G+ L+E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+ ++ T +G+ E++L+ +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 174
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHK 272
+F K+G+G +G VYK G+ +A+ ++ T +G+ E++L+ +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF-DATRSVQLDWKRRLSIINGIARGILYL 331
N+V+ ++E++ D+ F DA+ + S + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H +++HRDLK N+L++ + K++DFG AR FG ++ T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEI 173
Query: 392 AMG-GIFSIKSDVFSFGVLLLEIISGR 417
+G +S D++S G + E+++ R
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 126/313 (40%), Gaps = 44/313 (14%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKA-----IAVKRLSRTS 252
E EFP N+ LG G FG V + T GK +AVK L T+
Sbjct: 39 EKWEFP----------RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA 88
Query: 253 GQGLKE-FKNEVNLIAKL-QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSV 310
KE +E+ +++ L QH+N+V I EY L L +R +
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 311 QLDWKRRLSIINGIARGILYLHEDSRL----------KIIHRDLKASNVLLDDDMNPKIS 360
+ D +I N A LH S++ IHRD+ A NVLL + KI
Sbjct: 149 ETD--PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 361 DFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNN 420
DFG AR + N +MAPE +++++SDV+S+G+LL EI S N
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN- 265
Query: 421 GFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRP 480
G + + +KL +G+ ++ P AP + + C +P RP
Sbjct: 266 ----PYPGILVNSKFYKLVKDGY--QMAQPAF----APKNIYSIMQA---CWALEPTHRP 312
Query: 481 TMSSVVVMLASDS 493
T + L +
Sbjct: 313 TFQQICSFLQEQA 325
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 126/310 (40%), Gaps = 42/310 (13%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKA-----IAVKRLSRTS 252
E EFP N+ LG G FG V + T GK +AVK L T+
Sbjct: 31 EKWEFP----------RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA 80
Query: 253 GQGLKE-FKNEVNLIAKL-QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL------- 303
KE +E+ +++ L QH+N+V I EY L L
Sbjct: 81 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 140
Query: 304 FDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFG 363
D L+ + L + +A+G+ +L + IHRD+ A NVLL + KI DFG
Sbjct: 141 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFG 197
Query: 364 TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFY 423
AR + N +MAPE +++++SDV+S+G+LL EI S N
Sbjct: 198 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---- 253
Query: 424 FSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMS 483
G + + +KL +G+ ++ P AP + + C +P RPT
Sbjct: 254 -PYPGILVNSKFYKLVKDGY--QMAQPAF----APKNIYSIMQA---CWALEPTHRPTFQ 303
Query: 484 SVVVMLASDS 493
+ L +
Sbjct: 304 QICSFLQEQA 313
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T GK +AVK++ Q + NEV ++ H N+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + R + YLH +IH
Sbjct: 112 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E+I G YF+E
Sbjct: 222 VDIWSLGIMVIEMIDGEPP---YFNE 244
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 15/201 (7%)
Query: 222 NKLGQGGFGPVYKGT--LADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
+KLG+G + VYKG L D +A+K RL G + EV+L+ L+H N+V
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTL 65
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++EY+ +K L +L D + + +L + + RG+ Y H R
Sbjct: 66 HDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMH-NVKLFLFQ-LLRGLAYCH---RQ 119
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
K++HRDLK N+L+++ K++DFG AR + ++ T Y P+ +G
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTD 177
Query: 397 FSIKSDVFSFGVLLLEIISGR 417
+S + D++ G + E+ +GR
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQG--LKEFKNEVNLIAKLQHKNLVRXXXX 280
LG+G FG V K + AVK +++ S + EV L+ KL H N+++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ E L + R + D R II + GI Y+H+ + I+
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR---IIKQVFSGITYMHKHN---IV 143
Query: 341 HRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
HRDLK N+LL+ D + KI DFG + F N + GT Y+APE + G +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGTY 199
Query: 398 SIKSDVFSFGVLLLEIISG 416
K DV+S GV+L ++SG
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 129/290 (44%), Gaps = 46/290 (15%)
Query: 224 LGQGGFGPVYKGTL--ADGKA----IAVKRLSR-TSGQGLKEFKNEVNLIAKLQHKNLVR 276
LG+G FG V K T G+A +AVK L S L++ +E N++ ++ H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-------------SVQLDWKRRLSIING 323
I EY SL L ++ + S LD ++ G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 324 --------IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQA 375
I++G+ YL E + ++HRDL A N+L+ + KISDFG +R +
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 376 NTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYT 435
+ +MA E I++ +SDV+SFGVLL EI++ N Y + L
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP--YPGIPPERLFN-- 263
Query: 436 WKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSV 485
L GH +E D +C+ +E+ + + L C +Q+P RP + +
Sbjct: 264 --LLKTGHRMERPD-----NCS-EEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ QG K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIV 76
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE------FKNEVNLIAKLQHKNLVR 276
LG+G FG V T + +A+K +SR Q LK+ + E++ + L+H ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISR---QLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ EY + D ++ + R + + +R I I Y H R
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFD-YIVEKKRMTEDEGRR---FFQQIICAIEYCH---R 126
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
KI+HRDLK N+LLDD++N KI+DFG + I + N T+ G+ Y APE G +
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTS--CGSPNYAAPEVINGKL 183
Query: 397 FS-IKSDVFSFGVLLLEIISGR 417
++ + DV+S G++L ++ GR
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 209 GLALEATNHFSDENKLGQ----GGFGPVYKG-TLADGKAIAVK----RLSRTSGQGLKEF 259
G + +H SD +LG+ GG V+ L D + +AVK L+R L+ F
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-F 59
Query: 260 KNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSV-QLDWKRR 317
+ E A L H +V + Y+ + +D V L D + + KR
Sbjct: 60 RREAQNAAALNHPAIVAVYDTGEAETPAGPL-PYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ-AN 376
+ +I + + + H++ IIHRD+K +N+L+ K+ DFG AR + N
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T + GT Y++PE A G +SDV+S G +L E+++G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ QG K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIV 76
Query: 276 RXXX------XXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 76 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 123
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 276 RXXX------XXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 104
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 162
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 163 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 216
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 276 RXXX------XXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 217 HFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQGLK---EFKNEVNLIAKLQHK 272
H+ + LG G FG V G G +AVK L+R + L + K E+ + +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
++++ + EY+ L ++ R +++ +R + I + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCH 128
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
R ++HRDLK NVLLD MN KI+DFG + + + ++ G+ Y APE
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVI 182
Query: 393 MGGIFS-IKSDVFSFGVLLLEIISG 416
G +++ + D++S GV+L ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRT--SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G+G F V + GK +AVK + +T + L++ EV + L H N+V+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
+ EY + +L R + + + + I + Y H+ I+
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF---IV 135
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFG-GNQNQANTNIIAGTYGYMAPEYAMGGIFS- 398
HRDLKA N+LLD D N KI+DFG + F GN+ A G Y APE G +
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAPELFQGKKYDG 191
Query: 399 IKSDVFSFGVLLLEIISG 416
+ DV+S GV+L ++SG
Sbjct: 192 PEVDVWSLGVILYTLVSG 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 168
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 222
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 75 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 122
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 77
Query: 276 RXXX------XXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 135
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 136 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 189
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 168
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 169 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 222
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 112
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 170
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 171 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 224
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 81
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 139
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 140 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 193
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 73 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 120
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 114
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 172
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 173 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 226
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 155
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 213
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 214 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRY-Y 267
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 80
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 138
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 139 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRY-Y 192
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 276 RXXX------XXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 292 EYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLL 351
E+M SLD L +A R + + ++SI + RG+ YL E + +I+HRD+K SN+L+
Sbjct: 94 EHMDGGSLDQVLKEAKR-IPEEILGKVSI--AVLRGLAYLRE--KHQIMHRDVKPSNILV 148
Query: 352 DDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLL 411
+ K+ DFG + G + N GT YMAPE G +S++SD++S G+ L+
Sbjct: 149 NSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 412 EIISGR 417
E+ GR
Sbjct: 205 ELAVGR 210
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 276 RXXX------XXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I + YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE SD+++ G ++ ++++G
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 126/310 (40%), Gaps = 42/310 (13%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKA-----IAVKRLSRTS 252
E EFP N+ LG G FG V + T GK +AVK L T+
Sbjct: 39 EKWEFP----------RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA 88
Query: 253 GQGLKE-FKNEVNLIAKL-QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL------- 303
KE +E+ +++ L QH+N+V I EY L L
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 148
Query: 304 FDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFG 363
D L+ + L + +A+G+ +L + IHRD+ A NVLL + KI DFG
Sbjct: 149 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFG 205
Query: 364 TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFY 423
AR + N +MAPE +++++SDV+S+G+LL EI S N
Sbjct: 206 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN---- 261
Query: 424 FSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMS 483
G + + +KL +G+ ++ P AP + + C +P RPT
Sbjct: 262 -PYPGILVNSKFYKLVKDGY--QMAQPAF----APKNIYSIMQA---CWALEPTHRPTFQ 311
Query: 484 SVVVMLASDS 493
+ L +
Sbjct: 312 QICSFLQEQA 321
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 89
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 147
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 148 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY-Y 201
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 95
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 153
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 154 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 207
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 146
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 147 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 200
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 128/314 (40%), Gaps = 46/314 (14%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKA-----IAVKRLSRTS 252
E EFP N+ LG G FG V + T GK +AVK L T+
Sbjct: 39 EKWEFP----------RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA 88
Query: 253 GQGLKE-FKNEVNLIAKL-QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSV 310
KE +E+ +++ L QH+N+V I EY L L +R +
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 311 QLD-----------WKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKI 359
+ D + L + +A+G+ +L + IHRD+ A NVLL + KI
Sbjct: 149 ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKI 205
Query: 360 SDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKN 419
DFG AR + N +MAPE +++++SDV+S+G+LL EI S N
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 420 NGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADR 479
G + + +KL +G+ ++ P AP + + C +P R
Sbjct: 266 -----PYPGILVNSKFYKLVKDGY--QMAQPAF----APKNIYSIMQA---CWALEPTHR 311
Query: 480 PTMSSVVVMLASDS 493
PT + L +
Sbjct: 312 PTFQQICSFLQEQA 325
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 84
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 142
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 143 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 196
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ + K FKN E+ ++ KL H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 146
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 147 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 200
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQGLKEFKNEVNLIAKL 269
+L + F + LGQG FG V K A D + A+K++ R + + L +EV L+A L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASL 59
Query: 270 QH-------------KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR 316
H +N V+ EY N++L +D S L+ +R
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLIHSENLNQQR 115
Query: 317 R--LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-------- 366
+ I + Y+H IIHRDLK N+ +D+ N KI DFG A+
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 367 IFGGNQN----QANTNIIAGTYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEII 414
+ +QN N GT Y+A E G G ++ K D++S G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLV 275
++D +G G FG VY+ L D G+ +A+K++ QG K FKN E+ ++ KL H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIV 76
Query: 276 R------XXXXXXXXXXXXXIYEYMPNKSLDV--HLFDATRSVQLDWKRRLSIINGIARG 327
R + +Y+P V H A +++ + + + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY--MYQLFRS 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGY 386
+ Y+H I HRD+K N+LLD D K+ DFG+A+ + + N + I Y Y
Sbjct: 135 LAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY-Y 188
Query: 387 MAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
APE G ++ DV+S G +L E++ G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Query: 205 LFPLGLALEATNHFSDENKLGQ-GGFGPVYKGTLADG----KAIAVK----RLSRTSGQG 255
L P G + +H SD +LG+ GFG + + LA + +AVK L+R
Sbjct: 14 LVPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY 73
Query: 256 LKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSV-QLD 313
L+ F+ E A L H +V + Y+ + +D V L D + +
Sbjct: 74 LR-FRREAQNAAALNHPAIVAVYDTGEAETPAGPL-PYIVMEYVDGVTLRDIVHTEGPMT 131
Query: 314 WKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN 373
KR + +I + + + H++ IIHRD+K +N+++ K+ DFG AR + N
Sbjct: 132 PKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 374 Q-ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T + GT Y++PE A G +SDV+S G +L E+++G
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 80 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 127
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 128 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 96 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLA-DGKAI--AVKRLSR-TSGQGLKEFKNEVNLIAKL-Q 270
N ++ +G+G FG V K + DG + A+KR+ S ++F E+ ++ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLD--------------WKR 316
H N++ EY P+ +L + +R ++ D ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNL-LDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 317 RLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN 376
L +ARG+ YL S+ + IHR+L A N+L+ ++ KI+DFG +R G +
Sbjct: 141 LLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVK 194
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTY 434
+ +MA E +++ SDV+S+GVLL EI+S G G +E + L
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL--- 251
Query: 435 TWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+G+ +E K DE+ + C ++ P +RP+ + ++V L
Sbjct: 252 -----PQGYRLE------KPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSL 292
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 96 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 126
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 187 VDVWSCGIVLTAMLAG 202
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 101 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 148
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 149 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 98 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 207 PLGLALEATNHFSDENK----LGQGGFGPVY--KGTLADGKAIAVKRLSRTSGQGLKEFK 260
P +T FSD K LG+G FG V K + G+ AVK +S+ + + +
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKE 71
Query: 261 N---EVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRR 317
+ EV L+ +L H N+ + + E L + R ++D R
Sbjct: 72 SLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR- 130
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQ 374
II + GI Y H++ KI+HRDLK N+LL+ D N +I DFG + F ++
Sbjct: 131 --IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
+ GT Y+APE + G + K DV+S GV+L ++SG
Sbjct: 186 KDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 96 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 95 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 142
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 99 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 217 HFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQGLK---EFKNEVNLIAKLQHK 272
H+ + LG G FG V G G +AVK L+R + L + K E+ + +H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
++++ + EY+ L ++ R +++ +R + I + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---LFQQILSAVDYCH 128
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
R ++HRDLK NVLLD MN KI+DFG + + + + G+ Y APE
Sbjct: 129 ---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVI 182
Query: 393 MGGIFS-IKSDVFSFGVLLLEIISG 416
G +++ + D++S GV+L ++ G
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 209 GLALEATNHFSDENKLGQ----GGFGPVYKG-TLADGKAIAVK----RLSRTSGQGLKEF 259
G + +H SD +LG+ GG V+ L D + +AVK L+R L+ F
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-F 59
Query: 260 KNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSV-QLDWKRR 317
+ E A L H +V + Y+ + +D V L D + + KR
Sbjct: 60 RREAQNAAALNHPAIVAVYDTGEAETPAGPL-PYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ-AN 376
+ +I + + + H++ IIHRD+K +N+++ K+ DFG AR + N
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T + GT Y++PE A G +SDV+S G +L E+++G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I + YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE SD+++ G ++ ++++G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 98 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I + YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE SD+++ G ++ ++++G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 98 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I + YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE SD+++ G ++ ++++G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 216 NHFSDENKLGQGGFGPVY---KGTLAD-GKAIAVKRLSRTSGQGLKEF--KNEVNLIAKL 269
+HF LGQG FG V+ K T D G A+K L + + + K E +++A +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 270 QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL 329
H +V+ I +++ L L + D K L+ +A G+
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALGLD 144
Query: 330 YLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
+LH L II+RDLK N+LLD++ + K++DFG ++ ++ +A + GT YMAP
Sbjct: 145 HLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAP 199
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISG 416
E S +D +S+GVL+ E+++G
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 17/220 (7%)
Query: 209 GLALEATNHFSDENKLGQ----GGFGPVYKG-TLADGKAIAVK----RLSRTSGQGLKEF 259
G + +H SD +LG+ GG V+ L D + +AVK L+R L+ F
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-F 59
Query: 260 KNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSV-QLDWKRR 317
+ E A L H +V + Y+ + +D V L D + + KR
Sbjct: 60 RREAQNAAALNHPAIVAVYDTGEAETPAGPL-PYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ-AN 376
+ +I + + + H++ IIHRD+K +N+++ K+ DFG AR + N
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T + GT Y++PE A G +SDV+S G +L E+++G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 98 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T+ + GK +AVK++ Q + NEV ++ QH+N+V
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + + + LH +IH
Sbjct: 87 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 139
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YF+E
Sbjct: 197 VDIWSLGIMVIEMVDGEPP---YFNE 219
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 224 LGQGGFG--------PVYKGTLADGKAIAVKRLSRTSG-QGLKEFKNEVNLIAKLQHKNL 274
LG+G FG P GT G+ +AVK L G Q +K E++++ L H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 275 VRXXX--XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
++ + EY+P SL +L S+ L + L I G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPE 390
IHR+L A NVLLD+D KI DFG A+ G + + + + Y APE
Sbjct: 135 SQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 190
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIIS 415
F SDV+SFGV L E+++
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAGE 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKL-QHKNLVRXXXXXX 282
+G G +G VYKG +A ++ +G +E K E+N++ K H+N+
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 283 XXX------XXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ E+ S+ L T+ L + I I RG+ +LH+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 148
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM--- 393
K+IHRD+K NVLL ++ K+ DFG + + NT I GT +MAPE
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI--GTPYWMAPEVIACDE 205
Query: 394 --GGIFSIKSDVFSFGVLLLEIISG 416
+ KSD++S G+ +E+ G
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 128
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 402 -DVFSFGVLLLEIISGR 417
DV+S G++L +++G
Sbjct: 189 VDVWSCGIVLTAMLAGE 205
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T+ + GK +AVK++ Q + NEV ++ QH+N+V
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + + + LH +IH
Sbjct: 91 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 143
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YF+E
Sbjct: 201 VDIWSLGIMVIEMVDGEPP---YFNE 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T+ + GK +AVK++ Q + NEV ++ QH+N+V
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + + + LH +IH
Sbjct: 96 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 148
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YF+E
Sbjct: 206 VDIWSLGIMVIEMVDGEPP---YFNE 228
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 24/205 (11%)
Query: 224 LGQGGFG--------PVYKGTLADGKAIAVKRLSRTSG-QGLKEFKNEVNLIAKLQHKNL 274
LG+G FG P GT G+ +AVK L G Q +K E++++ L H+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 275 VRXXX--XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
++ + EY+P SL +L S+ L + L I G+ YLH
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPE 390
IHR+L A NVLLD+D KI DFG A+ G + + + + Y APE
Sbjct: 135 AQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 190
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIIS 415
F SDV+SFGV L E+++
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 99 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 146
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 149 RILFPSCIMGFEL---HPYSKVPAV---GALAPSSAPGRIGNHYSYDI---LRGGEQQA- 198
R +F S IM L HP+SK G L P + Y +I LRG Q
Sbjct: 105 REIFDSYIMKELLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQNLRGDVFQKF 164
Query: 199 -ESQEFPLF------PLGLALEATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSR 250
ES +F F L + L N FS +G+GGFG VY AD GK A+K L +
Sbjct: 165 IESDKFTRFCQWKNVELNIHL-TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 223
Query: 251 TS---GQGLKEFKNE---VNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF 304
QG NE ++L++ +V I + M L HL
Sbjct: 224 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 283
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ D + I G+ ++H +R +++RDLK +N+LLD+ + +ISD G
Sbjct: 284 QHGVFSEADMR---FYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGL 337
Query: 365 ARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISG 416
A F + A+ GT+GYMAPE G+ + +D FS G +L +++ G
Sbjct: 338 ACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 32/208 (15%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFK-----NEVNLIAKLQHKNLVRX 277
LG+G F V LA + A+K L + +KE K E +++++L H V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING---------IARGI 328
+ + ++ L L A L + R++ + I +
Sbjct: 95 ------------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 142
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH IIHRDLK N+LL++DM+ +I+DFGTA++ QA N GT Y++
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE SD+++ G ++ ++++G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T+ + GK +AVK++ Q + NEV ++ QH+N+V
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + + + LH +IH
Sbjct: 98 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 150
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YF+E
Sbjct: 208 VDIWSLGIMVIEMVDGEPP---YFNE 230
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 149 RILFPSCIMGFEL---HPYSKVPAV---GALAPSSAPGRIGNHYSYDI---LRGGEQQA- 198
R +F S IM L HP+SK G L P + Y +I LRG Q
Sbjct: 106 REIFDSYIMKELLACSHPFSKSATEHVQGHLGKKQVPPDLFQPYIEEICQNLRGDVFQKF 165
Query: 199 -ESQEFPLF------PLGLALEATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSR 250
ES +F F L + L N FS +G+GGFG VY AD GK A+K L +
Sbjct: 166 IESDKFTRFCQWKNVELNIHL-TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
Query: 251 TS---GQGLKEFKNE---VNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF 304
QG NE ++L++ +V I + M L HL
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ D + I G+ ++H +R +++RDLK +N+LLD+ + +ISD G
Sbjct: 285 QHGVFSEADMR---FYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 365 ARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISG 416
A F + A+ GT+GYMAPE G+ + +D FS G +L +++ G
Sbjct: 339 ACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L S+ +G++ + + E+ + + L+H N++R
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E+ P L L + + D +R + + +A + Y HE K+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCHER---KV 135
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+L+ KI+DFG + + + GT Y+ PE G
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 400 KSDVFSFGVLLLEIISG 416
K D++ GVL E + G
Sbjct: 192 KVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L S+ +G++ + + E+ + + L+H N++R
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E+ P L L + + D +R + + +A + Y HE K+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCHER---KV 135
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+L+ KI+DFG + + + GT Y+ PE G
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 400 KSDVFSFGVLLLEIISG 416
K D++ GVL E + G
Sbjct: 192 KVDLWCAGVLCYEFLVG 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 21/264 (7%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXX 284
+G FG V+K L + +AVK Q + + E+ ++H+NL++
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 285 XXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED--------SR 336
+ L D + + W + ++RG+ YLHED +
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHK 141
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
I HRD K+ NVLL D+ ++DFG A F + +T+ GT YMAPE G I
Sbjct: 142 PSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAI 201
Query: 397 -FS----IKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPV 451
F ++ D+++ G++L E++S K E+ +L + ++ EL + V
Sbjct: 202 NFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEY---MLPFEEEIGQHPSLEELQEVV 258
Query: 452 LKQSCAP---DELLKFIHIGLLCV 472
+ + P D LK + LCV
Sbjct: 259 VHKKMRPTIKDHWLKHPGLAQLCV 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 14/197 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAI-AVKRL--SRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
LG+G FG VY K I A+K L S+ +G++ + + E+ + + L+H N++R
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E+ P L L + + D +R + + +A + Y HE K+
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALHYCHER---KV 136
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRD+K N+L+ KI+DFG + + + GT Y+ PE G
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 400 KSDVFSFGVLLLEIISG 416
K D++ GVL E + G
Sbjct: 193 KVDLWCAGVLCYEFLVG 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G +G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T+ + GK +AVK++ Q + NEV ++ QH+N+V
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + + + LH +IH
Sbjct: 141 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 193
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YF+E
Sbjct: 251 VDIWSLGIMVIEMVDGEPP---YFNE 273
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAV---KRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V Y T A+ + K L+++ QG + E++ + L+H ++++
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 69
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ EY N+ D ++ + + + +R I + Y H R
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARR---FFQQIISAVEYCH---RH 122
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
KI+HRDLK N+LLD+ +N KI+DFG + I + N T+ G+ Y APE G ++
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS--CGSPNYAAPEVISGKLY 179
Query: 398 S-IKSDVFSFGVLLLEIISGR 417
+ + DV+S GV+L ++ R
Sbjct: 180 AGPEVDVWSCGVILYVMLCRR 200
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 128/323 (39%), Gaps = 55/323 (17%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKA-----IAVKRLSRTS 252
E EFP N+ LG G FG V + T GK +AVK L T+
Sbjct: 24 EKWEFP----------RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA 73
Query: 253 GQGLKE-FKNEVNLIAKL-QHKNLVRXXXXXXXXXXXXXIYEY----------------M 294
KE +E+ +++ L QH+N+V I EY M
Sbjct: 74 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAM 133
Query: 295 PNKSL----DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
SL D D L+ + L + +A+G+ +L + IHRD+ A NVL
Sbjct: 134 LGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 190
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
L + KI DFG AR + N +MAPE +++++SDV+S+G+LL
Sbjct: 191 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 411 LEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLL 470
EI S N G + + +KL +G+ ++ P AP + +
Sbjct: 251 WEIFSLGLN-----PYPGILVNSKFYKLVKDGY--QMAQPAF----APKNIYSIMQA--- 296
Query: 471 CVQQDPADRPTMSSVVVMLASDS 493
C +P RPT + L +
Sbjct: 297 CWALEPTHRPTFQQICSFLQEQA 319
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLV------- 275
+G GGFG V+K DGK +KR+ + + + EV +AKL H N+V
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWD 74
Query: 276 ------RXXXXXXXXXXXXXIYEYMP--NKSLDVHLFDATRSVQLDWKRRLSIINGIARG 327
++ M +K + R +LD L + I +G
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKG 134
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+ Y+H K+I+RDLK SN+ L D KI DFG + +N GT YM
Sbjct: 135 VDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFG---LVTSLKNDGKRXRSKGTLRYM 188
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEII 414
+PE + + D+++ G++L E++
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 149 RILFPSCIMGFEL---HPYSKVP---AVGALAPSSAPGRIGNHYSYDI---LRGGEQQA- 198
R +F + IM L HP+SK G L P + Y +I LRG Q
Sbjct: 106 REIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKF 165
Query: 199 -ESQEFPLF------PLGLALEATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSR 250
ES +F F L + L N FS +G+GGFG VY AD GK A+K L +
Sbjct: 166 IESDKFTRFCQWKNVELNIHL-TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
Query: 251 TS---GQGLKEFKNE---VNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF 304
QG NE ++L++ +V I + M L HL
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ D + I G+ ++H +R +++RDLK +N+LLD+ + +ISD G
Sbjct: 285 QHGVFSEADMR---FYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 365 ARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISG 416
A F + A+ GT+GYMAPE G+ + +D FS G +L +++ G
Sbjct: 339 ACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 36/293 (12%)
Query: 149 RILFPSCIMGFEL---HPYSKVP---AVGALAPSSAPGRIGNHYSYDI---LRGGEQQA- 198
R +F + IM L HP+SK G L P + Y +I LRG Q
Sbjct: 106 REIFDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKF 165
Query: 199 -ESQEFPLF------PLGLALEATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSR 250
ES +F F L + L N FS +G+GGFG VY AD GK A+K L +
Sbjct: 166 IESDKFTRFCQWKNVELNIHL-TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
Query: 251 TS---GQGLKEFKNE---VNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLF 304
QG NE ++L++ +V I + M L HL
Sbjct: 225 KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 284
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ D + I G+ ++H +R +++RDLK +N+LLD+ + +ISD G
Sbjct: 285 QHGVFSEADMR---FYAAEIILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 365 ARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISG 416
A F + A+ GT+GYMAPE G+ + +D FS G +L +++ G
Sbjct: 339 ACDFSKKKPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 146 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 199
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 200 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 255
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 256 VEMAVGR 262
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 224 LGQGGFGPVYKGT-LADGK----AIAVKRLSR-TSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG G FG VYKG + DG+ +A+K L TS + KE +E ++A + + R
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ + MP L H+ + +L + L+ IA+G+ YL ED RL
Sbjct: 85 LGICLTSTVQL-VTQLMPYGCLLDHVRE--NRGRLGSQDLLNWCMQIAKGMSYL-EDVRL 140
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+HRDL A NVL+ + KI+DFG AR+ ++ + + + +MA E + F
Sbjct: 141 --VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 398 SIKSDVFSFGVLLLEIIS 415
+ +SDV+S+GV + E+++
Sbjct: 199 THQSDVWSYGVTVWELMT 216
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 223 KLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
K+G+G G V T+ + GK +AVK++ Q + NEV ++ QH+N+V
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ E++ +L D +++ ++ ++ + + + LH +IH
Sbjct: 218 LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIH 270
Query: 342 RDLKASNVLLDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIK 400
RD+K+ ++LL D K+SDFG A++ ++ + GT +MAPE + +
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 401 SDVFSFGVLLLEIISGRKNNGFYFSE 426
D++S G++++E++ G YF+E
Sbjct: 328 VDIWSLGIMVIEMVDGEPP---YFNE 350
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 53/227 (23%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
+G GGFG V+K DGK ++R+ + + + EV +AKL H N+V
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHYNGCWD 75
Query: 283 XXXXXXXIYEYMP---NKSLDVHLFD------ATRS------VQLDW-----------KR 316
++Y P + SL+ +D ++RS +Q+++ KR
Sbjct: 76 G-------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 317 R---------LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARI 367
R L + I +G+ Y+H K+IHRDLK SN+ L D KI DFG +
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFG---L 182
Query: 368 FGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEII 414
+N GT YM+PE + + D+++ G++L E++
Sbjct: 183 VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAV---KRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V Y T A+ + K L+++ QG + E++ + L+H ++++
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 73
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ EY N+ D ++ + + + +R I + Y H R
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARR---FFQQIISAVEYCH---RH 126
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
KI+HRDLK N+LLD+ +N KI+DFG + I + N T+ G+ Y APE G ++
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS--CGSPNYAAPEVISGKLY 183
Query: 398 S-IKSDVFSFGVLLLEIISGR 417
+ + DV+S GV+L ++ R
Sbjct: 184 AGPEVDVWSCGVILYVMLCRR 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAV---KRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V Y T A+ + K L+++ QG + E++ + L+H ++++
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 79
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ EY N+ D ++ + + + +R I + Y H R
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARR---FFQQIISAVEYCH---RH 132
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
KI+HRDLK N+LLD+ +N KI+DFG + I + N T+ G+ Y APE G ++
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS--CGSPNYAAPEVISGKLY 189
Query: 398 S-IKSDVFSFGVLLLEIISGR 417
+ + DV+S GV+L ++ R
Sbjct: 190 AGPEVDVWSCGVILYVMLCRR 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAV---KRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
LG+G FG V Y T A+ + K L+++ QG + E++ + L+H ++++
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKL 78
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ EY N+ D ++ + + + +R I + Y H R
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARR---FFQQIISAVEYCH---RH 131
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
KI+HRDLK N+LLD+ +N KI+DFG + I + N T+ G+ Y APE G ++
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS--CGSPNYAAPEVISGKLY 188
Query: 398 S-IKSDVFSFGVLLLEIISGR 417
+ + DV+S GV+L ++ R
Sbjct: 189 AGPEVDVWSCGVILYVMLCRR 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQGLKEFKNEVNLIAKL 269
+L + F + LGQG FG V K A D + A+K++ R + + L +EV L+A L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASL 59
Query: 270 QH-------------KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR 316
H +N V+ EY N +L +D S L+ +R
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQR 115
Query: 317 R--LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTA--------- 365
+ I + Y+H IIHRDLK N+ +D+ N KI DFG A
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 366 -RIFGGNQNQANTNIIA--GTYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEII 414
++ N ++ N+ + GT Y+A E G G ++ K D++S G++ E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 224 LGQGGFG--------PVYKGTLADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNL 274
LG+G FG P GT G+ +AVK L G L+ ++ E+ ++ L H+++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 275 VRXX--XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
V+ + EY+P SL +L V L + L I G+ YLH
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGL--AQLLLFAQQICEGMAYLH 128
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPE 390
IHR L A NVLLD+D KI DFG A+ G + + + + Y APE
Sbjct: 129 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 184
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIIS 415
F SDV+SFGV L E+++
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 224 LGQGGFG--------PVYKGTLADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNL 274
LG+G FG P GT G+ +AVK L G L+ ++ E+ ++ L H+++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 275 VRXX--XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
V+ + EY+P SL +L V L + L I G+ YLH
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGL--AQLLLFAQQICEGMAYLH 129
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPE 390
IHR L A NVLLD+D KI DFG A+ G + + + + Y APE
Sbjct: 130 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APE 185
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIIS 415
F SDV+SFGV L E+++
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 13/197 (6%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
LG G FG V+K A G +A K + + +E KNE++++ +L H NL++
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSV-QLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ EY+ L + D + ++ +LD + + I GI ++H+ + I+H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMHQ---MYILH 210
Query: 342 RDLKASNVLL--DDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
DLK N+L D KI DFG AR + + + + GT ++APE S
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNFGTPEFLAPEVVNYDFVSF 267
Query: 400 KSDVFSFGVLLLEIISG 416
+D++S GV+ ++SG
Sbjct: 268 PTDMWSVGVIAYMLLSG 284
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 215 TNHFSDENKLGQGGFGPVY----KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
++ F E++LG+G VY KGT K A+K L +T + K + E+ ++ +L
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGT---QKPYALKVLKKTVDK--KIVRTEIGVLLRLS 106
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
H N+++ + E + L + + + D + I + Y
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERD---AADAVKQILEAVAY 163
Query: 331 LHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIAGTYGYM 387
LHE+ I+HRDLK N+L D KI+DFG ++I ++Q + GT GY
Sbjct: 164 LHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYC 217
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLL 432
APE G + + D++S G++ ++ G + ++ E G +
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP---FYDERGDQFM 259
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 10/207 (4%)
Query: 213 EATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSR-TSGQGLKEFKNEVNLIAKLQ 270
E ++ +G GGF V + G+ +A+K + + T G L K E+ + L+
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
H+++ + + EY P L ++ R L + + I + Y
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVSAVAY 123
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
+H HRDLK N+L D+ K+ DFG GN++ + G+ Y APE
Sbjct: 124 VHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPE 179
Query: 391 YAMGGIF-SIKSDVFSFGVLLLEIISG 416
G + ++DV+S G+LL ++ G
Sbjct: 180 LIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 164
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 165 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 220
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 221 VEMAVGR 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 137
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 138 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 194 VEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 137
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 138 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 194 VEMAVGR 200
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXXX 281
LG+G G V +A+AVK + E K E+ + L H+N+V+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
EY L + + D +R + + G++YLH + I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---FFHQLMAGVVYLH---GIGITH 127
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RD+K N+LLD+ N KISDFG A +F N + N + GT Y+APE F +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 402 -DVFSFGVLLLEIISG 416
DV+S G++L +++G
Sbjct: 188 VDVWSCGIVLTAMLAG 203
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSR-TSGQGLKEFKNEVNLIAKLQHKN-LVRX 277
+G+G FG VY G D A+K LSR T Q ++ F E L+ L H N L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
+ YM + L + R+ + K +S +ARG+ YL E
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAEQ--- 143
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTA-----RIFGGNQNQANTNIIAGTYGYMAPEYA 392
K +HRDL A N +LD+ K++DFG A R + Q + + + A E
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL---PVKWTALESL 200
Query: 393 MGGIFSIKSDVFSFGVLLLEIIS 415
F+ KSDV+SFGVLL E+++
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 103 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 156
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 157 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 212
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 213 VEMAVGR 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 137
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 138 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 194 VEMAVGR 200
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 20/225 (8%)
Query: 200 SQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKE 258
++E P + L +E F LG+G FG V+ + A+K L + L +
Sbjct: 5 NKERPSLQIKLKIED---FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMD 59
Query: 259 FKNEVNLIAK------LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQL 312
E ++ K +H L + EY+ L H+ +
Sbjct: 60 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKF 116
Query: 313 DWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQ 372
D R I G+ +LH I++RDLK N+LLD D + KI+DFG +
Sbjct: 117 DLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--ENML 171
Query: 373 NQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
A TN GT Y+APE +G ++ D +SFGVLL E++ G+
Sbjct: 172 GDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 224 LGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAK------LQHKNLVR 276
LG+G FG V+ + A+K L + L + E ++ K +H L
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVV--LMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ EY+ L H+ + D R I G+ +LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHI---QSCHKFDLSRATFYAAEIILGLQFLHSKG- 138
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
I++RDLK N+LLD D + KI+DFG + A TN GT Y+APE +G
Sbjct: 139 --IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 397 FSIKSDVFSFGVLLLEIISGR 417
++ D +SFGVLL E++ G+
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 137
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 138 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 194 VEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 137
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G + N GT YM+PE G +S++SD++S G+ L
Sbjct: 138 VNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 193
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 194 VEMAVGR 200
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGTLA-DGKAIAVKRLSRTSGQGLKEFKNEVNLIAKL 269
+L + F + LGQG FG V K A D + A+K++ R + + L +EV L+A L
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASL 59
Query: 270 QH-------------KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKR 316
H +N V+ EY N++L +D S L+ +R
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLIHSENLNQQR 115
Query: 317 R--LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTA--------- 365
+ I + Y+H IIHR+LK N+ +D+ N KI DFG A
Sbjct: 116 DEYWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 366 -RIFGGNQNQANTNIIA--GTYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEII 414
++ N ++ N+ + GT Y+A E G G ++ K D +S G++ E I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + +G G +G V + G IAVK+LSR S K E+ L+ +
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 167
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 168 KYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 219
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + +++ D++S G ++ E+++GR
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 209 GLALEATNHFSDENKLGQ-GGFGPVYKGTLADG----KAIAVK----RLSRTSGQGLKEF 259
G + +H SD +LG+ GFG + + LA + +AVK L+R L+ F
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-F 59
Query: 260 KNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSV-QLDWKRR 317
+ E A L H +V + Y+ + +D V L D + + KR
Sbjct: 60 RREAQNAAALNHPAIVAVYATGEAETPAGPL-PYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ-AN 376
+ +I + + + H++ IIHRD+K +N+++ K+ DFG AR + N
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T + GT Y++PE A G +SDV+S G +L E+++G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 292 EYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
E+M SLD L A R Q+ K +++I +G+ YL E + KI+HRD+K SN+L
Sbjct: 87 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVI----KGLTYLRE--KHKIMHRDVKPSNIL 140
Query: 351 LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLL 410
++ K+ DFG + G N GT YM+PE G +S++SD++S G+ L
Sbjct: 141 VNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 196
Query: 411 LEIISGR 417
+E+ GR
Sbjct: 197 VEMAVGR 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+ +LG GGFG V + D G+ +A+K+ + S + + + E+ ++ KL H N+V
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 279 XXXXXXXXXX------XIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
EY L +L L ++++ I+ + YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ +IIHRDLK N++L + KI D G A+ +Q + T + GT Y+AP
Sbjct: 139 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFV-GTLQYLAP 192
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISG 416
E +++ D +SFG L E I+G
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 221 ENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+ +LG GGFG V + D G+ +A+K+ + S + + + E+ ++ KL H N+V
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 279 XXXXXXXXXX------XIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH 332
EY L +L L ++++ I+ + YLH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 333 EDSRLKIIHRDLKASNVLLD---DDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAP 389
E+ +IIHRDLK N++L + KI D G A+ +Q + T + GT Y+AP
Sbjct: 140 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFV-GTLQYLAP 193
Query: 390 EYAMGGIFSIKSDVFSFGVLLLEIISG 416
E +++ D +SFG L E I+G
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 127/317 (40%), Gaps = 50/317 (15%)
Query: 199 ESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKA-----IAVKRLSRTS 252
E EFP N+ LG G FG V + T GK +AVK L T+
Sbjct: 39 EKWEFP----------RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA 88
Query: 253 GQGLKE-FKNEVNLIAKL-QHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-- 308
KE +E+ +++ L QH+N+V I EY L ++ R
Sbjct: 89 HADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDL-LNFLRRKRPP 147
Query: 309 ------------SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMN 356
QL + L + +A+G+ +L + IHRD+ A NVLL +
Sbjct: 148 GLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHV 204
Query: 357 PKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
KI DFG AR + N +MAPE +++++SDV+S+G+LL EI S
Sbjct: 205 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 264
Query: 417 RKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDP 476
N G + + +KL +G+ ++ P AP + + C +P
Sbjct: 265 GLN-----PYPGILVNSKFYKLVKDGY--QMAQPAF----APKNIYSIMQA---CWALEP 310
Query: 477 ADRPTMSSVVVMLASDS 493
RPT + L +
Sbjct: 311 THRPTFQQICSFLQEQA 327
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 209 GLALEATNHFSDENKLGQ-GGFGPVYKGTLADG----KAIAVK----RLSRTSGQGLKEF 259
G + +H SD +LG+ GFG + + LA + +AVK L+R L+ F
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-F 59
Query: 260 KNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD-VHLFDATRSV-QLDWKRR 317
+ E A L H +V + Y+ + +D V L D + + KR
Sbjct: 60 RREAQNAAALNHPAIVAVYDTGEAETPAGPL-PYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ-AN 376
+ +I + + + H++ IIHRD+K +N+++ K+ DFG AR + N
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T + GT Y++PE A G +SDV+S G +L E+++G
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 192 RGGEQQAESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVK 246
RG SQE P F L + E + + + +G G +G V G +AVK
Sbjct: 17 RGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 76
Query: 247 RLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHL 303
+LSR S K E+ L+ ++H+N++ + Y+ + L
Sbjct: 77 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 136
Query: 304 FDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFG 363
+ + +L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG
Sbjct: 137 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 193
Query: 364 TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
AR + + T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 194 LAR----HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 224 LGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKN-----EVNLIAKLQHKNLVRX 277
LG+G F VYK + + +A+K++ K+ N E+ L+ +L H N++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++++M D+ + S+ L + + +G+ YLH+
Sbjct: 78 LDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW-- 132
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG-I 396
I+HRDLK +N+LLD++ K++DFG A+ FG ++ T Y APE G +
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARM 189
Query: 397 FSIKSDVFSFGVLLLEII 414
+ + D+++ G +L E++
Sbjct: 190 YGVGVDMWAVGCILAELL 207
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + ++ +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 36 GQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQIL 95
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ +S QL + I R
Sbjct: 96 LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR 155
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+L++ + KI DFG ARI + T +A T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA-TR 211
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXX 278
KLG+G +G VYK + +A+KR+ +G+ EV+L+ +LQH+N++
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 279 XXXXXXXXXXXIYEYMPN---KSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I+EY N K +D + + R ++ S + + G+ + H S
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIK-------SFLYQLINGVNFCH--S 150
Query: 336 RLKIIHRDLKASNVLL---DDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
R + +HRDLK N+LL D P KI DFG AR FG Q II T Y PE
Sbjct: 151 R-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPE 207
Query: 391 YAMGG-IFSIKSDVFSFGVLLLEII 414
+G +S D++S + E++
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 135 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 186
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 224 LGQGGFGPVYKGTLADGKA-------IAVKRLSRTSGQGLKE-FKNEVNLIAKL-QHKNL 274
LG G FG V T A G + +AVK L + +E +E+ ++ +L H+N+
Sbjct: 53 LGSGAFGKVMNAT-AYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHL-----------FDATRSVQLDWKRRLSIIN- 322
V I+EY L +L + +L+ + L+++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 323 --------GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
+A+G+ +L S +HRDL A NVL+ KI DFG AR + N
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE GI++IKSDV+S+G+LL EI S
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 27/193 (13%)
Query: 241 KAIAVKRLSRTSG--------QGLKEFK-NEVNLIAKLQ-HKNLVRXXXXXXXXXXXXXI 290
K AVK + T G Q L+E EV+++ K+ H N+++ +
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 291 YEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
++ M L +L T V L K I+ + I LH +L I+HRDLK N+L
Sbjct: 103 FDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 156
Query: 351 LDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI------FSIKSDV 403
LDDDMN K++DFG + ++ G + ++ + GT Y+APE + + + D+
Sbjct: 157 LDDDMNIKLTDFGFSCQLDPGEKLRS----VCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 404 FSFGVLLLEIISG 416
+S GV++ +++G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 191
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TR 191
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 155
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 211
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 193
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF Y+ T D K + ++ S ++ E+ + L + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E +SL + L ++V R + +G+ YLH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYF--MRQTIQGVQYLHNN---RV 163
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSI 399
IHRDLK N+ L+DDM+ KI DFG A + + T + GT Y+APE S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSF 221
Query: 400 KSDVFSFGVLLLEIISGR 417
+ D++S G +L ++ G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 194 GEQQAESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRL 248
SQE P F L + E + + + +G G +G V G +AVK+L
Sbjct: 2 AHHHHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKL 61
Query: 249 SR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFD 305
SR S K E+ L+ ++H+N++ + Y+ + L +
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 121
Query: 306 ATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTA 365
+ +L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG A
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 366 RIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
R + + T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 179 R----HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 143
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 144 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 199
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 191
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TR 195
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 196
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 141
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 142 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 197
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 132
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 133 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 188
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 195
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVY---KGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVRX 277
LGQG FG V+ K + +D + + ++ + + +++ K E +++ ++ H +V+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I +++ L L + D K L+ +A + +LH L
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHLHS---L 145
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
II+RDLK N+LLD++ + K++DFG ++ ++ +A + GT YMAPE
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGH 203
Query: 398 SIKSDVFSFGVLLLEIISG 416
+ +D +SFGVL+ E+++G
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 241 KAIAVKRLSRTSG--------QGLKEFK-NEVNLIAKLQ-HKNLVRXXXXXXXXXXXXXI 290
K AVK + T G Q L+E EV+++ K+ H N+++ +
Sbjct: 30 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 291 YEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
++ M L +L T V L K I+ + I LH +L I+HRDLK N+L
Sbjct: 90 FDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 143
Query: 351 LDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI------FSIKSDV 403
LDDDMN K++DFG + ++ G + + + GT Y+APE + + + D+
Sbjct: 144 LDDDMNIKLTDFGFSCQLDPGEKLRE----VCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 404 FSFGVLLLEIISG 416
+S GV++ +++G
Sbjct: 200 WSTGVIMYTLLAG 212
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 189
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TR 191
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGLKEFK-NEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TR 195
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 27/193 (13%)
Query: 241 KAIAVKRLSRTSG--------QGLKEFK-NEVNLIAKLQ-HKNLVRXXXXXXXXXXXXXI 290
K AVK + T G Q L+E EV+++ K+ H N+++ +
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 291 YEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVL 350
++ M L +L T V L K I+ + I LH +L I+HRDLK N+L
Sbjct: 103 FDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENIL 156
Query: 351 LDDDMNPKISDFG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI------FSIKSDV 403
LDDDMN K++DFG + ++ G + + + GT Y+APE + + + D+
Sbjct: 157 LDDDMNIKLTDFGFSCQLDPGEKLRE----VCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 404 FSFGVLLLEIISG 416
+S GV++ +++G
Sbjct: 213 WSTGVIMYTLLAG 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 189
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 22 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 81
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 82 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 194
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 195 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 21 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 80
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 81 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 140
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 193
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 194 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 37/210 (17%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+G G G V Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 279 XXXXXXXXXXXIYEYMPNKSLD--------VHLFDATRS----VQLDWKRRLSIINGIAR 326
+ P KSL+ + L DA S ++LD +R ++ +
Sbjct: 90 NV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGY 386
GI +LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
APE +G + D++S GV++ E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 135 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 186
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA-TR 191
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAV----KRLSRTSG-QGLKEFKNEVNLIAKLQHKNLVRX 277
LG G FG V+KG + +G++I + K + SG Q + + + I L H ++VR
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ----LDWKRRLSIINGIARGILYLHE 333
+ +Y+P SL H+ ++ L+W + IA+G+ YL E
Sbjct: 81 LGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 133
Query: 334 DSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
++HR+L A NVLL +++DFG A + + Q + +MA E
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 394 GGIFSIKSDVFSFGVLLLEIIS 415
G ++ +SDV+S+GV + E+++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMT 212
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV-- 91
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATRS----VQLDWKRRLSIINGIARGILY 330
+ P KSL+ + L DA S ++LD +R ++ + GI +
Sbjct: 92 ----------FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S GV++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVY---KGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVRX 277
LGQG FG V+ K + +D + + ++ + + +++ K E +++ ++ H +V+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I +++ L L + D K L+ +A + +LH L
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHLHS---L 145
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
II+RDLK N+LLD++ + K++DFG ++ ++ +A + GT YMAPE
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGH 203
Query: 398 SIKSDVFSFGVLLLEIISG 416
+ +D +SFGVL+ E+++G
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLSR---TSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPE 188
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 230
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTE 501
+ K+ P++ + I+ + + C P DRPT ++ D + QPT+
Sbjct: 231 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL-----RDFLLEAQPTD 280
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVY---KGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVRX 277
LGQG FG V+ K + +D + + ++ + + +++ K E +++ ++ H +V+
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I +++ L L + D K L+ +A + +LH L
Sbjct: 93 HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA---ELALALDHLHS---L 146
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
II+RDLK N+LLD++ + K++DFG ++ ++ +A + GT YMAPE
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGH 204
Query: 398 SIKSDVFSFGVLLLEIISG 416
+ +D +SFGVL+ E+++G
Sbjct: 205 TQSADWWSFGVLMFEMLTG 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 20/202 (9%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAV----KRLSRTSG-QGLKEFKNEVNLIAKLQHKNLVRX 277
LG G FG V+KG + +G++I + K + SG Q + + + I L H ++VR
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ----LDWKRRLSIINGIARGILYLHE 333
+ +Y+P SL H+ ++ L+W + IA+G+ YL E
Sbjct: 99 LGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 151
Query: 334 DSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAM 393
++HR+L A NVLL +++DFG A + + Q + +MA E
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 394 GGIFSIKSDVFSFGVLLLEIIS 415
G ++ +SDV+S+GV + E+++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMT 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----H 179
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 180 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF Y+ T D K + ++ S ++ E+ + L + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E +SL + L ++V R + +G+ YLH + ++
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEARYF--MRQTIQGVQYLHNN---RV 163
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARI--FGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
IHRDLK N+ L+DDM+ KI DFG A F G + + + GT Y+APE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX----LCGTPNYIAPEVLCKKGH 219
Query: 398 SIKSDVFSFGVLLLEIISGR 417
S + D++S G +L ++ G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ + L + I R
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILR 139
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 195
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 17/229 (7%)
Query: 198 AESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR-- 250
+ SQE P F L + E + + + +G G +G V G +AVK+LSR
Sbjct: 2 SHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 251 TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRS 309
S K E+ L+ ++H+N++ + Y+ + L + +
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 310 VQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFG 369
+L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 175
Query: 370 GNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ + T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 176 -HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQ---GLKEFKNEVNLIAKLQH 271
N F LG+GGFG V + A GK A K+L + + G NE ++ K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
+ +V + M L H++ ++ R + I G+ L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDL 302
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H R +I++RDLK N+LLDD + +ISD G A Q GT GYMAPE
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEV 356
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGR 417
++ D ++ G LL E+I+G+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE +++I+SDV+SFGVLL EI S G E L ++
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRM--- 266
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
A + P + Q+ L C +P+ RPT S +V L +
Sbjct: 267 -RAPDYTTPEMYQTM------------LDCWHGEPSQRPTFSELVEHLGN 303
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLSR---TSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPE 194
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 236
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTE 501
+ K+ P++ + I+ + + C P DRPT ++ D + QPT+
Sbjct: 237 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL-----RDFLLEAQPTD 286
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLSR---TSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 140
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV---PFAWCAPE 194
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 236
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTE 501
+ K+ P++ + I+ + + C P DRPT ++ D + QPT+
Sbjct: 237 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL-----RDFLLEAQPTD 286
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 223 KLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKNLVRXXX 279
K+G+G +G V+K D G+ +A+K+ + + K E+ ++ +L+H NLV
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDA-TRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
++EY + L H D R V + SI + + + H+ +
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVK--SITWQTLQAVNFCHKHN--- 122
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-F 397
IHRD+K N+L+ K+ DFG AR+ G + + + T Y +PE +G +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV--ATRWYRSPELLVGDTQY 180
Query: 398 SIKSDVFSFGVLLLEIISG----------------RKNNGFYFSEHGQTLLTYTWKLWCE 441
DV++ G + E++SG RK G H Q T +
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY----- 235
Query: 442 GHAVELIDPVLKQSCAPDEL----LKFIHIGLL--CVQQDPADRPTMSSVV 486
V++ DP + P EL + + +GLL C+ DP +R T ++
Sbjct: 236 FSGVKIPDP---EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGXVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ + L+ ++ L + I R
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR 155
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA-TR 211
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 120/295 (40%), Gaps = 47/295 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLS---RTSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPE 184
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 226
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTE 501
+ K+ P++ + I+ + + C P DRPT ++ D + QPT+
Sbjct: 227 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL-----RDFLLEAQPTD 276
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF Y+ T D K + ++ S ++ E+ + L + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ E +SL + L ++V R + +G+ YLH + ++
Sbjct: 94 FFEDDDFVYVVLEICRRRSL-LELHKRRKAVTEPEAR--YFMRQTIQGVQYLHNN---RV 147
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARI--FGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
IHRDLK N+ L+DDM+ KI DFG A F G + + + GT Y+APE
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD----LCGTPNYIAPEVLCKKGH 203
Query: 398 SIKSDVFSFGVLLLEIISGR 417
S + D++S G +L ++ G+
Sbjct: 204 SFEVDIWSLGCILYTLLVGK 223
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----H 179
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 180 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 194 GEQQAESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRL 248
SQE P F L + E + + + +G G +G V G +AVK+L
Sbjct: 2 AHHHHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 61
Query: 249 SR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFD 305
SR S K E+ L+ ++H+N++ + Y+ + L +
Sbjct: 62 SRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 121
Query: 306 ATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTA 365
+ +L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG A
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 366 RIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
R + + T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 179 R----HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 135 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 186
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 136 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 187
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 193 GGEQQAESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKR 247
G SQE P F L + E + + + +G G +G V G +AVK+
Sbjct: 1 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 248 LSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLF 304
LSR S K E+ L+ ++H+N++ + Y+ + L
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ + +L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 365 ARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
AR + + T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 178 AR----HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 137 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 188
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 22 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 81
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 82 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 194
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 195 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 193
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 176
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 177 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGKAIAVKRLSRT-----SGQGLKEFKNEVNLIAKLQHK 272
F + KLG G FG V+ L + ++ ++R+ +T S +++ + E+ ++ L H
Sbjct: 24 FIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDA-TRSVQLDWKRRLSIINGIARGILYL 331
N+++ + E L + A R L ++ + + Y
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 332 HEDSRLKIIHRDLKASNVLLDDD--MNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
H ++H+DLK N+L D +P KI DFG A +F +++ N AGT YMA
Sbjct: 141 HSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMA 194
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + + K D++S GV++ +++G
Sbjct: 195 PEVFKRDV-TFKCDIWSAGVVMYFLLTG 221
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----H 179
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 180 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 21 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 80
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 81 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 140
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 193
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 194 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF Y+ T D K + ++ S ++ E+ + L + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIAR--------GILY 330
+ E +SL ++H KRR ++ AR G+ Y
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELH------------KRRKAVTEPEARYFMRQTIQGVQY 157
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARI--FGGNQNQANTNIIAGTYGYMA 388
LH + ++IHRDLK N+ L+DDM+ KI DFG A F G + + + GT Y+A
Sbjct: 158 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD----LCGTPNYIA 210
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
PE S + D++S G +L ++ G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 14 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 73
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 74 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 186
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 187 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 14 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 73
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 74 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 186
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 187 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + T +A T Y A
Sbjct: 136 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVA-TRWYRA 187
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A++++S Q + E+ ++
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA-TR 195
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 176
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 177 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + +G G +G V G +AVK+LSR S
Sbjct: 12 SQERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 71
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 72 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 131
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 184
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 185 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 181
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 182 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 13 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 72
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 73 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 132
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----H 185
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 186 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 13 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 72
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 73 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 132
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR----H 185
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 186 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE +++I+SDV+SFGVLL EI S G E L ++
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 320
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
A + P + Q+ L C +P+ RPT S +V L +
Sbjct: 321 -RAPDYTTPEMYQTM------------LDCWHGEPSQRPTFSELVEHLGN 357
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 17/234 (7%)
Query: 193 GGEQQAESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKR 247
G SQE P F L + E + + + +G G +G V G +AVK+
Sbjct: 1 GSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 60
Query: 248 LSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLF 304
LSR S K E+ L+ ++H+N++ + Y+ + L
Sbjct: 61 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 120
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ + +L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGL 177
Query: 365 ARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
AR + + T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 178 AR----HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE +++I+SDV+SFGVLL EI S G E L ++
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 315
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
A + P + Q+ L C +P+ RPT S +V L +
Sbjct: 316 -RAPDYTTPEMYQTM------------LDCWHGEPSQRPTFSELVEHLGN 352
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 66
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 67 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 179
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 180 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 119/294 (40%), Gaps = 47/294 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLS---RTSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV---PFAWCAPE 184
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 226
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
+ K+ P++ + I+ + + C P DRPT ++ D + QPT
Sbjct: 227 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL-----RDFLLEAQPT 275
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 1 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 60
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 61 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 173
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 174 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN-TNIIAGTYG 385
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 386 YMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+ +H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN-TNIIAGTYG 385
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 386 YMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 159 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE +++I+SDV+SFGVLL EI S G E L ++
Sbjct: 216 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 272
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
A + P + Q+ L C +P+ RPT S +V L +
Sbjct: 273 -RAPDYTTPEMYQTM------------LDCWHGEPSQRPTFSELVEHLGN 309
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF ++ + AD K + ++ S ++ E+++ L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E +SL ++H R L + I G YLH R +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLH---RNR 137
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+IHRDLK N+ L++D+ KI DFG A + + T + GT Y+APE S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHS 195
Query: 399 IKSDVFSFGVLLLEIISGR 417
+ DV+S G ++ ++ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL-ADGKAIAVKRLSRTSGQ---GLKEFKNEVNLIAKLQH 271
N F LG+GGFG V + A GK A K+L + + G NE ++ K+
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
+ +V + M L H++ ++ R + I G+ L
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDL 302
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H R +I++RDLK N+LLDD + +ISD G A Q GT GYMAPE
Sbjct: 303 H---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR---VGTVGYMAPEV 356
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGR 417
++ D ++ G LL E+I+G+
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + +S +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG R +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF ++ + AD K + ++ S ++ E+++ L H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E +SL ++H R L + I G YLH R +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLH---RNR 137
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+IHRDLK N+ L++D+ KI DFG A + + T + GT Y+APE S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHS 195
Query: 399 IKSDVFSFGVLLLEIISGR 417
+ DV+S G ++ ++ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGK 214
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE +++I+SDV+SFGVLL EI S G E L ++
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 313
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
A + P + Q+ L C +P+ RPT S +V L +
Sbjct: 314 -RAPDYTTPEMYQTM------------LDCWHGEPSQRPTFSELVEHLGN 350
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF ++ + AD K + ++ S ++ E+++ L H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E +SL ++H R L + I G YLH R +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLH---RNR 141
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+IHRDLK N+ L++D+ KI DFG A + + T + GT Y+APE S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHS 199
Query: 399 IKSDVFSFGVLLLEIISGR 417
+ DV+S G ++ ++ G+
Sbjct: 200 FEVDVWSIGCIMYTLLVGK 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 4 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 63
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 64 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLAR----H 176
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 177 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS--GRKNNGFYFSEHGQTLLTYTWKLWCE 441
+MAPE +++I+SDV+SFGVLL EI S G E L ++
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--- 322
Query: 442 GHAVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
A + P + Q+ L C +P+ RPT S +V L +
Sbjct: 323 -RAPDYTTPEMYQTM------------LDCWHGEPSQRPTFSELVEHLGN 359
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 209 GLALEATNHFSDENKLGQGGFGPVYKGTLADGKA-IAVKRLSRTSGQGL-KEFKNEVNLI 266
G + +++ + +G+G +G V K +A+K++S Q + E+ ++
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 267 AKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR 326
+H+N++ Y+ ++ L+ ++ L + I R
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQAN--TNIIAGTY 384
G+ Y+H + ++HRDLK SN+LL+ + KI DFG AR+ + + T +A T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA-TR 193
Query: 385 GYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
Y APE + KS D++S G +L E++S R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 194 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + K IHRDL A N+LL + KI DFG AR + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+MAPE +++I+SDV+SFGVLL EI S
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 127/311 (40%), Gaps = 44/311 (14%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
+G+G FG VY G AI + + R + LK FK EV + +H+N+V
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 284 XXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRD 343
I ++L + DA + LD + I I +G+ YLH I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 344 LKASNVLLDDDMNPKISDFGTARIFG---GNQNQANTNIIAGTYGYMAPEYAMGGI---- 396
LK+ NV D+ I+DFG I G + + I G ++APE
Sbjct: 156 LKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 397 -----FSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPV 451
FS SDVF+ G + E+ + ++ + + +W G ++ P
Sbjct: 215 EDKLPFSKHSDVFALGTIWYEL---HAREWPFKTQPAEAI------IWQMGTGMK---PN 262
Query: 452 LKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPTEPAFSVGRVVA 511
L Q E+ + L C + +RPT + ++ ML +P+ R ++
Sbjct: 263 LSQIGMGKEISDIL---LFCWAFEQEERPTFTKLMDMLEK----LPKRN-------RRLS 308
Query: 512 NSGHLLSSAKV 522
+ GH SA++
Sbjct: 309 HPGHFWKSAEL 319
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF ++ + AD K + ++ S ++ E+++ L H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E +SL ++H R L + I G YLH R +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLH---RNR 135
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+IHRDLK N+ L++D+ KI DFG A + ++ GT Y+APE S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 399 IKSDVFSFGVLLLEIISGR 417
+ DV+S G ++ ++ G+
Sbjct: 194 FEVDVWSIGCIMYTLLVGK 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMAGFVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLADGKAI-AVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
+HF +G+G FG V D K + A+K +++ E +N E+ ++ L+H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV + + + L HL ++V + I + + YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMALDYL 131
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
+IIHRD+K N+LLD+ + I+DF A + + +AGT YMAPE
Sbjct: 132 QNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEM 185
Query: 392 ---AMGGIFSIKSDVFSFGVLLLEIISGRK 418
G +S D +S GV E++ GR+
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 213 EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
E + + + +G G +G V G +AVK+LSR S K E+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 270 QHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
+H+N++ + Y+ + L + + +L +I I RG+
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
Y+H IIHRDLK SN+ +++D KI DFG AR + + +A T Y A
Sbjct: 135 KYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVA-TRWYRA 186
Query: 389 PEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
PE + + ++ D++S G ++ E+++GR
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMAGFVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 216 NHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
+H+ +LG G FG V++ T A G A K + + + E+ ++ L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
V IYE+M L + D + D + + + +G+ ++HE+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN 274
Query: 335 SRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
+ +H DLK N++ + K+ DFG Q+ + GT + APE A
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVA 328
Query: 393 MGGIFSIKSDVFSFGVLLLEIISG 416
G +D++S GVL ++SG
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 240 GKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPN 296
G +AVK+LSR + K E+ L+ + HKN++ + Y+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 297 KSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMN 356
+ +D +L ++LD +R ++ + GI +LH IIHRDLK SN+++ D
Sbjct: 109 ELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 164
Query: 357 PKISDFGTARIFGGNQNQANTNIIAGTY----GYMAPEYAMGGIFSIKSDVFSFGVLLLE 412
KI DFG AR A TN + Y Y APE +G ++ D++S G ++ E
Sbjct: 165 LKILDFGLART-------ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGE 217
Query: 413 IISG 416
++ G
Sbjct: 218 LVKG 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF ++ + AD K + ++ S ++ E+++ L H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E +SL ++H R L + I G YLH R +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLH---RNR 161
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+IHRDLK N+ L++D+ KI DFG A + ++ GT Y+APE S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHS 219
Query: 399 IKSDVFSFGVLLLEIISGR 417
+ DV+S G ++ ++ G+
Sbjct: 220 FEVDVWSIGCIMYTLLVGK 238
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTS----GQGLKEFKNEVNLIAKLQHKNLVRXXX 279
LG+GGF ++ + AD K + ++ S ++ E+++ L H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 280 XXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E +SL ++H R L + I G YLH R +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLH---RNR 159
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+IHRDLK N+ L++D+ KI DFG A + ++ GT Y+APE S
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHS 217
Query: 399 IKSDVFSFGVLLLEIISGR 417
+ DV+S G ++ ++ G+
Sbjct: 218 FEVDVWSIGCIMYTLLVGK 236
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 114/279 (40%), Gaps = 42/279 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLS---RTSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 134
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPE 188
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 230
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSV 485
+ K+ P++ + I+ + + C P DRPT ++
Sbjct: 231 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+G G +G V Y L + +AVK+LSR S + E+ L+ L+H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 279 XXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
E Y+ + L + +S L + ++ + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
IIHRDLK SNV +++D +I DFG AR ++ T +A T Y APE + +
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVA-TRWYRAPEIMLNWMH 205
Query: 397 FSIKSDVFSFGVLLLEIISGR 417
++ D++S G ++ E++ G+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 37/210 (17%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+G G G V Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII--- 86
Query: 279 XXXXXXXXXXXIYEYMPNKSLD--------VHLFDATRS----VQLDWKRRLSIINGIAR 326
+ + P KSL+ + L DA S ++LD +R ++ +
Sbjct: 87 ---------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGY 386
GI +LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-Y 191
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
APE +G + D++S G ++ E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 181
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 182 TADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 114/279 (40%), Gaps = 42/279 (15%)
Query: 222 NKLGQGGFGPVYKGTL--ADGK--AIAVKRLS---RTSGQGLKEFKNEVNLIAKLQHKNL 274
KLG G FG V +G GK ++AVK L + + + +F EVN + L H+NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
+R + E P SL L L R ++ +A G+ YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK 130
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN----QANTNIIAGTYGYMAPE 390
+ IHRDL A N+LL KI DFG R N + Q + + + + APE
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPE 184
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDP 450
FS SD + FGV L E + TY + W + +++
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWE------------------MFTYGQEPWIGLNGSQILHK 226
Query: 451 VLKQS---CAPDELLKFIH-IGLLCVQQDPADRPTMSSV 485
+ K+ P++ + I+ + + C P DRPT ++
Sbjct: 227 IDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 22 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 81
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 82 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 193
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 194 HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----H 181
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 182 TADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 240 GKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPN 296
G +AVK+LSR + K E+ L+ + HKN++ + Y+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 297 KSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMN 356
+ +D +L ++LD +R ++ + GI +LH IIHRDLK SN+++ D
Sbjct: 107 ELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCT 162
Query: 357 PKISDFGTARIFGGNQNQANTNIIAGTY----GYMAPEYAMGGIFSIKSDVFSFGVLLLE 412
KI DFG AR A+TN + Y Y APE +G + D++S G ++ E
Sbjct: 163 LKILDFGLART-------ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 215
Query: 413 IISG 416
++ G
Sbjct: 216 LVKG 219
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 68
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----H 181
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 182 TADEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQ-GLK-EFKNEVNLIAKLQ 270
AT+ + ++G G +G VYK G +A+K + +G+ GL EV L+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 271 ---HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL---FDATRSVQLDWKRRLSIINGI 324
H N+VR I + + +D L D L + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
RG+ +LH + I+HRDLK N+L+ K++DFG ARI+ Q + + T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVVTL 175
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEI 413
Y APE + ++ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LS+ S
Sbjct: 14 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQS 73
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 74 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR +
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----H 186
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 187 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI D+G AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 196 QQAESQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR 250
Q SQE P F L + E + + + +G G +G V G +AVK+LSR
Sbjct: 21 QSNASQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR 80
Query: 251 --TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDAT 307
S K E+ L+ ++H+N++ + Y+ + L +
Sbjct: 81 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 140
Query: 308 RSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARI 367
+ +L +I I RG+ Y+H IIHRDLK SN+ +++D KI DFG AR
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR- 196
Query: 368 FGGNQNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 197 ----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 216 NHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
+H+ +LG G FG V++ T A G A K + + + E+ ++ L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
V IYE+M L + D + D + + + +G+ ++HE+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN 168
Query: 335 SRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
+ +H DLK N++ + K+ DFG Q+ + GT + APE A
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---VKVTTGTAEFAAPEVA 222
Query: 393 MGGIFSIKSDVFSFGVLLLEIISG 416
G +D++S GVL ++SG
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATRS----VQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA S ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 34/214 (15%)
Query: 218 FSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLV 275
F + LG G F V A GK AVK + + + +G + +NE+ ++ K++H+N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDV-------HLFDATRSVQLDW---KRRLSIINGIA 325
IYE PN V LFD R V+ + K ++I +
Sbjct: 84 ----------ALEDIYE-SPNHLYLVMQLVSGGELFD--RIVEKGFYTEKDASTLIRQVL 130
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ YLH R+ I+HRDLK N+L D++ ISDFG +++ G + G
Sbjct: 131 DAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA---CG 184
Query: 383 TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T GY+APE +S D +S GV+ ++ G
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATRS----VQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA S ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 222 NKLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLV----RX 277
++G+G +G V+ G G+ +AVK T + E+ ++H+N++
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAAD 100
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED--- 334
I +Y N SL +D +S LD K L + G+ +LH +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 335 --SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMAPE 390
+ I HRDLK+ N+L+ + I+D G A F + N+ + N GT YM PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 391 YAMGGIFS------IKSDVFSFGVLLLEI----ISGRKNNGFYFSEHGQTLLTYTWKLWC 440
+ I +D++SFG++L E+ +SG + H +++
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMR 276
Query: 441 EGHAVELIDPVLKQSCAPDELLKFIHIGLL---CVQQDPADRPTMSSVVVMLASDS 493
E ++ + P + DE L+ +G L C +PA R T V LA S
Sbjct: 277 EIVCIKKLRPSFPNRWSSDECLR--QMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATRS----VQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA S ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 222 NKLGQGGFGPVYKGTLADGKAI-AVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXX 278
K+G+G +G V+K + I A+KR+ +G+ E+ L+ +L+HKN+VR
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
++E+ ++ L + FD+ LD + S + + +G+ + H +
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFLFQLLKGLGFCHSRN--- 121
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG-IF 397
++HRDLK N+L++ + K++DFG AR FG + ++ T Y P+ G ++
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLY 179
Query: 398 SIKSDVFSFGVLLLEIISGRK 418
S D++S G + E+ + +
Sbjct: 180 STSIDMWSAGCIFAELANAAR 200
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G ++ T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMTPEVV--TRYYRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQ-GLK-EFKNEVNLIAKLQ 270
AT+ + ++G G +G VYK G +A+K + +G+ GL EV L+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 271 ---HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL---FDATRSVQLDWKRRLSIINGI 324
H N+VR I + + +D L D L + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
RG+ +LH + I+HRDLK N+L+ K++DFG ARI+ A + T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV---TL 175
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEI 413
Y APE + ++ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 27/273 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
LG+G FG VY+G + K +AVK + KE F +E ++ L H ++V+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I E P L +L S+++ S+ I + + YL +
Sbjct: 76 GIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 129
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+HRD+ N+L+ K+ DFG +R + +++ ++ +M+PE F+
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 399 IKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAP 458
SDV+ F V + EI+S K F++ E+ + +E D + K P
Sbjct: 189 TASDVWMFAVCMWEILSFGK-QPFFWLENKDVI-----------GVLEKGDRLPKPDLCP 236
Query: 459 DELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
L + C DP+DRP + +V L+
Sbjct: 237 PVLYTLM---TRCWDYDPSDRPRFTELVCSLSD 266
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + IHRDL A N+LL KI DFG AR + N
Sbjct: 177 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+MAPE +++ +SDV+S+G+ L E+ S + G + + +K+ EG
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGMPVDSKFYKMIKEGF 288
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+L AP E+ + C DP RPT +V ++
Sbjct: 289 R------MLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 325
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI DF AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+G G +G V Y L + +AVK+LSR S + E+ L+ L+H+N++
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 279 XXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
E Y+ + L + + L + ++ + RG+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 143
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
IIHRDLK SNV +++D +I DFG AR ++ T +A T Y APE + +
Sbjct: 144 -IIHRDLKPSNVAVNEDCELRILDFGLAR----QADEEMTGYVA-TRWYRAPEIMLNWMH 197
Query: 397 FSIKSDVFSFGVLLLEIISGR 417
++ D++S G ++ E++ G+
Sbjct: 198 YNQTVDIWSVGCIMAELLQGK 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIH 149
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 37 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 87
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 88 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 143 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRY-YRAPE 196
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + IHRDL A N+LL KI DFG AR + N
Sbjct: 170 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+MAPE +++ +SDV+S+G+ L E+ S + G + + +K+ EG
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGMPVDSKFYKMIKEGF 281
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+L AP E+ + C DP RPT +V ++
Sbjct: 282 R------MLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 318
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 27/272 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
LG+G FG VY+G + K +AVK + KE F +E ++ L H ++V+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I E P L +L S+++ S+ I + + YL +
Sbjct: 92 GIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 145
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+HRD+ N+L+ K+ DFG +R + +++ ++ +M+PE F+
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 399 IKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAP 458
SDV+ F V + EI+S K F++ E+ + +E D + K P
Sbjct: 205 TASDVWMFAVCMWEILSFGK-QPFFWLENKDVI-----------GVLEKGDRLPKPDLCP 252
Query: 459 DELLKFIHIGLLCVQQDPADRPTMSSVVVMLA 490
L + C DP+DRP + +V L+
Sbjct: 253 PVLYTLM---TRCWDYDPSDRPRFTELVCSLS 281
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + IHRDL A N+LL KI DFG AR + N
Sbjct: 177 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+MAPE +++ +SDV+S+G+ L E+ S + G + + +K+ EG
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGMPVDSKFYKMIKEGF 288
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+L AP E+ + C DP RPT +V ++
Sbjct: 289 R------MLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 325
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + IHRDL A N+LL KI DFG AR + N
Sbjct: 154 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+MAPE +++ +SDV+S+G+ L E+ S + G + + +K+ EG
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGMPVDSKFYKMIKEGF 265
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+L AP E+ + C DP RPT +V ++
Sbjct: 266 R------MLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 302
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+A+G+ +L + IHRDL A N+LL KI DFG AR + N
Sbjct: 172 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGH 443
+MAPE +++ +SDV+S+G+ L E+ S + G + + +K+ EG
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS-----PYPGMPVDSKFYKMIKEGF 283
Query: 444 AVELIDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVML 489
+L AP E+ + C DP RPT +V ++
Sbjct: 284 R------MLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 320
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H LKIIHRD+K SN+LLD N K+ DFG I G + AG YMAPE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPYMAPER 196
Query: 392 ----AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVEL 447
A + ++SDV+S G+ L E+ +GR F + + T V+
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR----FPYPKWNSVFDQLT-------QVVKG 245
Query: 448 IDPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVV 486
P L S + FI+ LC+ +D + RP ++
Sbjct: 246 DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
+G+G +G V++G+ G+ +AVK S R +E E+ L+H+N++
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH-----EDSRL 337
+ + L+D + LD L I+ IA G+ +LH +
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMAPEYAMGG 395
I HRDLK+ N+L+ + I+D G A + + NQ + N GT YMAPE
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 396 I------FSIKSDVFSFGVLLLEIISGRKNNGF 422
I + D+++FG++L E+ +NG
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 254
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 19/214 (8%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
+G+G +G V++G+ G+ +AVK S R +E E+ L+H+N++
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH-----EDSRL 337
+ + L+D + LD L I+ IA G+ +LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMAPEYAMGG 395
I HRDLK+ N+L+ + I+D G A + + NQ + N GT YMAPE +
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE-VLDE 191
Query: 396 IFSI-------KSDVFSFGVLLLEIISGRKNNGF 422
+ + D+++FG++L E+ +NG
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 27/273 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
LG+G FG VY+G + K +AVK + KE F +E ++ L H ++V+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I E P L +L S+++ S+ I + + YL +
Sbjct: 80 GIIEEEPTWI-IMELYPYGELGHYLERNKNSLKVLTLVLYSL--QICKAMAYLES---IN 133
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
+HRD+ N+L+ K+ DFG +R + +++ ++ +M+PE F+
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 399 IKSDVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAP 458
SDV+ F V + EI+S K F++ E+ + +E D + K P
Sbjct: 193 TASDVWMFAVCMWEILSFGK-QPFFWLENKDVI-----------GVLEKGDRLPKPDLCP 240
Query: 459 DELLKFIHIGLLCVQQDPADRPTMSSVVVMLAS 491
L + C DP+DRP + +V L+
Sbjct: 241 PVLYTLM---TRCWDYDPSDRPRFTELVCSLSD 270
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 223 KLGQGGFGPVY----KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXX 278
KLG G +G V K T + +AI + R + S + EV ++ L H N+++
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVE-RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
+ E L + + ++D II + G+ YLH+ +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVD---AAVIIKQVLSGVTYLHKHN--- 156
Query: 339 IIHRDLKASNVLLDD---DMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
I+HRDLK N+LL+ D KI DFG + +F +NQ GT Y+APE +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPE-VLRK 212
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+ K DV+S GV+L +++G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
+G+G +G V++G+ G+ +AVK S R +E E+ L+H+N++
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 283 XXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLH-----EDSRL 337
+ + L+D + LD L I+ IA G+ +LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMAPEYAMGG 395
I HRDLK+ N+L+ + I+D G A + + NQ + N GT YMAPE
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 396 I------FSIKSDVFSFGVLLLEIISGRKNNGF 422
I + D+++FG++L E+ +NG
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGI 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGTLADGKA---IAVKRLSR-TSGQGLKEFKNEVNL 265
L L+ N + +LG G FG V +G K +A+K L + T +E E +
Sbjct: 4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 63
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ +L + +VR + E L H F + ++ +++ ++
Sbjct: 64 MHQLDNPYIVRLIGVCQAEALML-VMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVS 120
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY- 384
G+ YL E + +HRDL A NVLL + KISDFG ++ G + + T AG +
Sbjct: 121 MGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWP 176
Query: 385 -GYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+ APE FS +SDV+S+GV + E +S
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 224 LGQGGFGPV---YKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXX 278
+G G +G V Y L + +AVK+LSR S + E+ L+ L+H+N++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 279 XXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
E Y+ + L + + L + ++ + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
IIHRDLK SNV +++D +I DFG AR ++ T +A T Y APE + +
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR----QADEEMTGYVA-TRWYRAPEIMLNWMH 205
Query: 397 FSIKSDVFSFGVLLLEIISGR 417
++ D++S G ++ E++ G+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 214 ATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQ-GLK-EFKNEVNLIAKLQ 270
AT+ + ++G G +G VYK G +A+K + +G+ GL EV L+ +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 271 ---HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL---FDATRSVQLDWKRRLSIINGI 324
H N+VR I + + +D L D L + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
RG+ +LH + I+HRDLK N+L+ K++DFG ARI+ Q + T
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVVTL 175
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEI 413
Y APE + ++ D++S G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 224 LGQGGFGPVY--KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXX 281
LG G F V+ K L GK A+K + ++ +NE+ ++ K++H+N+V
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ + + L + + R V + L +I + + YLHE+ I+H
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILE--RGVYTEKDASL-VIQQVLSAVKYLHENG---IVH 129
Query: 342 RDLKASNVL-LDDDMNPK--ISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
RDLK N+L L + N K I+DFG +++ + + GT GY+APE +S
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 399 IKSDVFSFGVLLLEIISG 416
D +S GV+ ++ G
Sbjct: 186 KAVDCWSIGVITYILLCG 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 32/239 (13%)
Query: 191 LRGGEQQAESQEFPLFPLGLALEATNHFSD----ENKLGQGGFGPVYK------GTLADG 240
+ GG+Q EF + A+ FSD + +LG+G F V + G
Sbjct: 7 MTGGQQMGRGSEF-------MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAA 59
Query: 241 KAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD 300
K I K+LS + ++ + E + KLQH N+VR +++ + L
Sbjct: 60 KIINTKKLS---ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 116
Query: 301 VHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNP--- 357
+ + D I I I Y H + I+HR+LK N+LL
Sbjct: 117 EDIVAREFYSEADASH---CIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAV 170
Query: 358 KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
K++DFG A N ++A + AGT GY++PE +S D+++ GV+L ++ G
Sbjct: 171 KLADFGLA--IEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI FG AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIH 142
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 143 RDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 199
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 200 DIWSVGCIMGEMVRHK 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 37/216 (17%)
Query: 223 KLGQGGFGPVYKGTLADG---KAIAVKRLSR-------TSGQGLKEFK----NEVNLIAK 268
KLG G +G V +G KAI V + S+ + +++F NE++L+
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSL-----DVHLFDATRSVQLDWKRRLSIING 323
L H N+++ + E+ L + H FD + +I+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA--------NIMKQ 154
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDD---MNPKISDFGTARIFGGNQNQANTNII 380
I GI YLH+ + I+HRD+K N+LL++ +N KI DFG + F + +
Sbjct: 155 ILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--- 208
Query: 381 AGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT Y+APE + ++ K DV+S GV++ ++ G
Sbjct: 209 LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI D G AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 38 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 88
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 89 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 143
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + + T Y APE
Sbjct: 144 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV---TRYYRAPE 197
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+G + D++S G ++ E+I G
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---IIH 149
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 149
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI D G AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 303 LFD-ATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISD 361
LFD T V L K SI+ + + +LH ++ I+HRDLK N+LLDD+M ++SD
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD 243
Query: 362 FG-TARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI------FSIKSDVFSFGVLLLEII 414
FG + + G + + + GT GY+APE + + + D+++ GV+L ++
Sbjct: 244 FGFSCHLEPGEKLRE----LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 415 SG 416
+G
Sbjct: 300 AG 301
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 38/223 (17%)
Query: 223 KLGQGGFGPVYKGT-LADGKAIAVKRLS---RTSGQGLKEFKNEVNLIAKLQ-HKNLVRX 277
KLG+G +G V+K G+ +AVK++ + S + F+ E+ ++ +L H+N+V
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNL 74
Query: 278 XXXXXXXXXXXX--IYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+++YM D+H R+ L+ + ++ + + I YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYM---ETDLHA--VIRANILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGG------------NQNQAN------- 376
++HRD+K SN+LL+ + + K++DFG +R F N+N N
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 377 -TNIIAGTYGYMAPEYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
T+ +A T Y APE +G K D++S G +L EI+ G+
Sbjct: 187 LTDYVA-TRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 187
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENV 244
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 245 DIWSVGCIMGEMVRHK 260
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFT 93
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 149
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 150 RDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 111 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 168 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 200 SQEFPLF---PLGLAL-EATNHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSR--TS 252
SQE P F L + E + + + +G G +G V G +AVK+LSR S
Sbjct: 2 SQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS 61
Query: 253 GQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYE-YMPNKSLDVHLFDATRSVQ 311
K E+ L+ ++H+N++ + Y+ + L + + +
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 312 LDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGN 371
L +I I RG+ Y+H IIHRDLK SN+ +++D KI D G AR +
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLAR----H 174
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
+ T +A T Y APE + + ++ D++S G ++ E+++GR
Sbjct: 175 TDDEMTGYVA-TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
A E + +G G +G V G+ +A+K+LSR + K E+ L+
Sbjct: 37 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEY---MPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
+QH+N++ Y++ MP D+ ++ ++ ++ +
Sbjct: 97 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQ---KIMGMEFSEEKIQYLVYQM 153
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
+G+ Y+H ++HRDLK N+ +++D KI DFG AR A T
Sbjct: 154 LKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTR 205
Query: 385 GYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
Y APE + + ++ D++S G ++ E+++G+
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 127 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 184 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 127 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 184 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 107 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 164 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 222 NKLGQGGFGPVYKGTLADGKAI-AVKRLS-RTSGQGLKEFK-NEVNLIAKLQHKNLVRXX 278
K+G+G +G V+K + I A+KR+ +G+ E+ L+ +L+HKN+VR
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
++E+ ++ L + FD+ LD + S + + +G+ + H +
Sbjct: 68 DVLHSDKKLTLVFEFC-DQDLKKY-FDSCNG-DLDPEIVKSFLFQLLKGLGFCHSRN--- 121
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG-IF 397
++HRDLK N+L++ + K+++FG AR FG + ++ T Y P+ G ++
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLY 179
Query: 398 SIKSDVFSFGVLLLEIISG 416
S D++S G + E+ +
Sbjct: 180 STSIDMWSAGCIFAELANA 198
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 117 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 174 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 125 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 182 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 111 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 168 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGTLADGKA---IAVKRLSRTSGQGL--KEFKNEVNL 265
A E + D +G G +G V + DG+ +A+K+L R L K E+ L
Sbjct: 20 AWEVRAVYRDLQPVGSGAYGAV--CSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL 77
Query: 266 IAKLQHKN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIIN 322
+ ++H+N L+ Y MP D L + +L R ++
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD--LGKLMKHEKLGEDRIQFLVY 135
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ +G+ Y+H IIHRDLK N+ +++D KI DFG AR QA++ +
Sbjct: 136 QMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGX 185
Query: 383 --TYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
T Y APE + + ++ D++S G ++ E+I+G+
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 105 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 162 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 131
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 132 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 187
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 188 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 244
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 245 DIWSVGCIMGEMVRHK 260
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 86
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 87 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 142
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 143 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 199
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 200 DIWSVGCIMGEMVRHK 215
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 150
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 207
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 208 DIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 149
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 143
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 200
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 201 DIWSVGCIMGEMVRHK 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 35 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 92
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 93 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 148
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 149 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 205
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 206 DIWSVGCIMGEMVRHK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 87
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 88 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 143
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 144 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 200
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 201 DIWSVGCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 93
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 94 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 149
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 150 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 206
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 207 DIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 12/196 (6%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT 94
Query: 283 XXXXXXXIYE-YMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
+ Y+ + +D +L + ++LD +R ++ + GI +LH IIH
Sbjct: 95 PQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---IIH 150
Query: 342 RDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
RDLK SN+++ D KI DFG AR G + T + Y Y APE +G +
Sbjct: 151 RDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPEVILGMGYKENV 207
Query: 402 DVFSFGVLLLEIISGR 417
D++S G ++ E++ +
Sbjct: 208 DIWSVGCIMGEMVRHK 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 18/214 (8%)
Query: 211 ALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
A E + +G G +G V G+ +A+K+LSR + K E+ L+
Sbjct: 19 AWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEY---MPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
+QH+N++ Y++ MP D+ ++ ++ ++ +
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQ---KIMGLKFSEEKIQYLVYQM 135
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
+G+ Y+H ++HRDLK N+ +++D KI DFG AR A T
Sbjct: 136 LKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTR 187
Query: 385 GYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISGR 417
Y APE + + ++ D++S G ++ E+++G+
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 210 LALEATNHFSDENKLGQGGFGPVYKGTLADGKA---IAVKRLSR-TSGQGLKEFKNEVNL 265
L L+ N + +LG G FG V +G K +A+K L + T +E E +
Sbjct: 330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQI 389
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIA 325
+ +L + +VR + E L H F + ++ +++ ++
Sbjct: 390 MHQLDNPYIVRLIGVCQAEALML-VMEMAGGGPL--HKFLVGKREEIPVSNVAELLHQVS 446
Query: 326 RGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY- 384
G+ YL E + +HR+L A NVLL + KISDFG ++ G + + T AG +
Sbjct: 447 MGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWP 502
Query: 385 -GYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
+ APE FS +SDV+S+GV + E +S
Sbjct: 503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)
Query: 223 KLGQGGFGPVYKGT-LADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+LG+G +G V K + G+ +AVKR+ T + Q K ++++ +
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 281 XXXXXXXXXIYEYMPNKSLDV---HLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I + + SLD + D +++ D ++++ I + + +LH S+L
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLH--SKL 173
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
+IHRD+K SNVL++ K+ DFG I G + I AG YMAPE +
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFG---ISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 397 ---FSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
+S+KSD++S G+ ++E+ R + G F + Q + + +L + + E +D
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 289
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 469 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 526 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G ++ T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPEVV--TRYYRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D++S G ++ E++ +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I+ + YLHE II+RDLK NVLLD + + K++D+G + G + T+ GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGT 216
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
Y+APE G + D ++ GVL+ E+++GR
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I+ + YLHE II+RDLK NVLLD + + K++D+G + G + T+ GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 184
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
Y+APE G + D ++ GVL+ E+++GR
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 315 KRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQ 374
K + +++ ++ G+ YL E + +HRDL A NVLL KISDFG ++ ++N
Sbjct: 470 KNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 375 ANTNIIAGTYG-----YMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A T+G + APE FS KSDV+SFGVL+ E S
Sbjct: 527 YK----AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 19/239 (7%)
Query: 223 KLGQGGFGPVYKGT-LADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+LG+G +G V K + G+ +AVKR+ T + Q K ++++ +
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 281 XXXXXXXXXIYEYMPNKSLDV---HLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I + + SLD + D +++ D ++++ I + + +LH S+L
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLH--SKL 129
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
+IHRD+K SNVL++ K+ DFG I G + +I AG YMAPE +
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFG---ISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 397 ---FSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
+S+KSD++S G+ ++E+ R + G F + Q + + +L + + E +D
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 245
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I+ + YLHE II+RDLK NVLLD + + K++D+G + G + T+ GT
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 169
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
Y+APE G + D ++ GVL+ E+++GR
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I+ + YLHE II+RDLK NVLLD + + K++D+G + G + T+ GT
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGT 173
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
Y+APE G + D ++ GVL+ E+++GR
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 213 EATNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTS-GQGLKEFKNEVNL 265
+ +H+ +LG G F V K G K I +RLS + G +E + EVN+
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 266 IAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGI 324
+ +++H N++ I E + L FD L + I
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQI 124
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDM--NPKIS--DFGTA-RIFGGNQNQANTNI 379
G+ YLH +I H DLK N++L D NP+I DFG A +I GN+ +
Sbjct: 125 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---- 177
Query: 380 IAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
I GT ++APE +++D++S GV+ ++SG
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 303 LFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDF 362
+F +S + D R I +++LH+ II+RDLK NVLLD + + K++DF
Sbjct: 112 MFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADF 168
Query: 363 GTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
G + G N T GT Y+APE ++ D ++ GVLL E++ G
Sbjct: 169 GMCK--EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKN-EVNLIAKLQHKNLVRXXX--- 279
+G G FG V++ L + +A+K++ + K FKN E+ ++ ++H N+V
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 280 ---XXXXXXXXXXIYEYMPNKSLDVHLFDATRS-VQLDWKRRLSIIN----GIARGILYL 331
+ EY+P ++ A+R +L + +I + R + Y+
Sbjct: 103 SNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
H + I HRD+K N+LLD K+ DFG+A+I + N + I Y Y APE
Sbjct: 158 HS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA--GEPNVSXICSRY-YRAPE 211
Query: 391 YAMGGI-FSIKSDVFSFGVLLLEIISGR 417
G ++ D++S G ++ E++ G+
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 24/214 (11%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTS-GQGLKEFKNEVNLIAK 268
+H+ +LG G F V K G K I +RLS + G +E + EVN++ +
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARG 327
++H N++ I E + L FD L + I G
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDG 120
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDM--NPKIS--DFGTA-RIFGGNQNQANTNIIAG 382
+ YLH +I H DLK N++L D NP+I DFG A +I GN+ + I G
Sbjct: 121 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN----IFG 173
Query: 383 TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T ++APE +++D++S GV+ ++SG
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXX 278
LG G F V LA+ K +A+K +++ + +G + +NE+ ++ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I + + L + + + D R +I + + YLH+ L
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LG 136
Query: 339 IIHRDLKASNVL---LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
I+HRDLK N+L LD+D ISDFG +++ + + GT GY+APE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+S D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 36 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 86
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 87 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G ++ T Y APE
Sbjct: 142 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART-AGTSFMMEPEVV--TRYYRAPE 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D++S G ++ E++ +
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXX 278
LG G F V LA+ K +A+K +++ + +G + +NE+ ++ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I + + L + + + D R +I + + YLH+ L
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LG 136
Query: 339 IIHRDLKASNVL---LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
I+HRDLK N+L LD+D ISDFG +++ + + GT GY+APE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+S D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXX 278
LG G F V LA+ K +A+K +++ + +G + +NE+ ++ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I + + L + + + D R +I + + YLH+ L
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LG 136
Query: 339 IIHRDLKASNVL---LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
I+HRDLK N+L LD+D ISDFG +++ + + GT GY+APE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+S D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 224 LGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRX 277
+G+G F V + G K + V + + + G ++ K E ++ L+H ++V
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 278 XXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGIL----YLHE 333
++E+M L F+ + + ++ + R IL Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
++ IIHRD+K NVLL N K+ DFG A G + A + GT +MAPE
Sbjct: 149 NN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV--GTPHFMAPE 203
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+ DV+ GV+L ++SG
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + LFD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 214 ATNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIA 267
AT+ + ++G G +G VYK G K++ V G EV L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 268 KLQ---HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHL---FDATRSVQLDWKRRLSII 321
+L+ H N+VR I + + +D L D L + ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 322 NGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIA 381
RG+ +LH + I+HRDLK N+L+ K++DFG ARI+ + A T ++
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVV 181
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI 413
T Y APE + ++ D++S G + E+
Sbjct: 182 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXX 278
LG G F V LA+ K +A+K +++ + +G + +NE+ ++ K++H N+V
Sbjct: 26 LGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I + + L + + + D R +I + + YLH+ L
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD---LG 136
Query: 339 IIHRDLKASNVL---LDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
I+HRDLK N+L LD+D ISDFG +++ + + GT GY+APE
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+S D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 30 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV-- 85
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 86 ----------FTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 136 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRY-YRAPE 189
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D++S G ++ E++ +
Sbjct: 190 VILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F +G G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EYMP + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D K++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F +G G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EYMP + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D K++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 34/207 (16%)
Query: 225 GQGGFGPVYKGTLADGKAIAVKRLSR--TSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXX 282
QG Y L + +A+K+LSR + K E+ L+ + HKN++
Sbjct: 41 AQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII------- 91
Query: 283 XXXXXXXIYEYMPNKSLD--------VHLFDATR----SVQLDWKRRLSIINGIARGILY 330
+ + P KSL+ + L DA ++LD +R ++ + GI +
Sbjct: 92 -----GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH IIHRDLK SN+++ D KI DFG AR G + T + Y Y APE
Sbjct: 147 LHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRY-YRAPE 200
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISGR 417
+G + D++S G ++ E++ +
Sbjct: 201 VILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LKE ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRL-SRTSGQGLKEFKNEVNLIAK 268
+H+ +LG G F V K G K I +RL S G +E + EVN++ +
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARG 327
++H N++ I E + L FD L + I G
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKESLTEDEATQFLKQILDG 141
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDM--NPKIS--DFGTA-RIFGGNQNQANTNIIAG 382
+ YLH +I H DLK N++L D NP+I DFG A +I GN+ + I G
Sbjct: 142 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN----IFG 194
Query: 383 TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
T ++APE +++D++S GV+ ++SG
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + LFD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 124
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 125 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 177
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 68
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 124
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 125 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 177
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 224 LGQGGFGPVY---KGTLAD-GKAIAVKRLSRT----SGQGLKEFKNEVNLIAKLQHKNLV 275
LG+GG+G V+ K T A+ GK A+K L + + + K E N++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I EY+ L + L R + I+ + +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
II+RDLK N++L+ + K++DFG + + T+ GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+ D +S G L+ ++++G
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 223 KLGQGGFGPVYKGTLAD--GKAIAVKRLSRTSGQGLKEFKN--EVNLIAKLQ---HKNLV 275
++G+G +G V+K G+ +A+KR+ +G+ EV ++ L+ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 276 R-----XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
R ++E++ ++ L +L D + + ++ + RG+ +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH +++HRDLK N+L+ K++DFG ARI+ A T+++ T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSVVV-TLWYRAPE 189
Query: 391 YAMGGIFSIKSDVFSFGVLLLEI 413
+ ++ D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 224 LGQGGFGPVY---KGTLAD-GKAIAVKRLSRT----SGQGLKEFKNEVNLIAKLQHKNLV 275
LG+GG+G V+ K T A+ GK A+K L + + + K E N++ +++H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
I EY+ L + L R + I+ + +LH+
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
II+RDLK N++L+ + K++DFG + + T+ GT YMAPE M
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+ D +S G L+ ++++G
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + LFD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 223 KLGQGGFGPVYKGTLAD--GKAIAVKRLSRTSGQGLKEFKN--EVNLIAKLQ---HKNLV 275
++G+G +G V+K G+ +A+KR+ +G+ EV ++ L+ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 276 R-----XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
R ++E++ ++ L +L D + + ++ + RG+ +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH +++HRDLK N+L+ K++DFG ARI+ + A T+++ T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVV-TLWYRAPE 189
Query: 391 YAMGGIFSIKSDVFSFGVLLLEI 413
+ ++ D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 223 KLGQGGFGPVYKGTLAD--GKAIAVKRLSRTSGQGLKEFKN--EVNLIAKLQ---HKNLV 275
++G+G +G V+K G+ +A+KR+ +G+ EV ++ L+ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 276 R-----XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
R ++E++ ++ L +L D + + ++ + RG+ +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LH +++HRDLK N+L+ K++DFG ARI+ + A T+++ T Y APE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVV-TLWYRAPE 189
Query: 391 YAMGGIFSIKSDVFSFGVLLLEI 413
+ ++ D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 216 NHFSDENKLGQGGFGPVY------KGTLADGKAIAVKRLSRTSG---------------- 253
N ++ ++++G+G +G V T K ++ K+L R +G
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 254 -----QGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR 308
+++ E+ ++ KL H N+V+ + V +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 309 SVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIF 368
+ D R + +GI YLH KIIHRD+K SN+L+ +D + KI+DFG + F
Sbjct: 133 PLSEDQAR--FYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 369 GGNQNQANTNIIAGTYGYMAPE--YAMGGIFSIKS-DVFSFGVLLLEIISGR 417
G+ + + GT +MAPE IFS K+ DV++ GV L + G+
Sbjct: 188 KGSDALLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 13/223 (5%)
Query: 209 GLALEATNHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVN 264
+A N F LG+G FG V A G+ A+K L + E + E
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 265 LIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGI 324
++ +H L + EY L HL +R R I
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEI 118
Query: 325 ARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTY 384
+ YLH S +++RDLK N++LD D + KI+DFG + G ++ A GT
Sbjct: 119 VSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTP 174
Query: 385 GYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + D + GV++ E++ GR FY +H
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 215
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 13/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R R I + YL
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYL 126
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H S +++RDLK N++LD D + KI+DFG + G ++ A GT Y+APE
Sbjct: 127 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 182
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 216
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFK-NEVNLIAKLQHKNLV--RXXX 279
K+G+G +G VYK DGK L + G G+ E+ L+ +L+H N++ +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDAT-----RSVQLDWKRRLSIINGIARGILYLHED 334
+++Y + + F + VQL S++ I GI YLH +
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 335 SRLKIIHRDLKASNVLL----DDDMNPKISDFGTARIFGGN-QNQANTNIIAGTYGYMAP 389
++HRDLK +N+L+ + KI+D G AR+F + A+ + + T+ Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 390 EYAMGGIFSIKS-DVFSFGVLLLEIISGR 417
E +G K+ D+++ G + E+++
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + LFD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 143
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYLAPEI 195
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 13/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R R I + YL
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYL 124
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H S +++RDLK N++LD D + KI+DFG + G ++ A GT Y+APE
Sbjct: 125 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 180
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR--IFGGNQNQANTNIIA 381
IA G+ +L II+RDLK NV+LD + + KI+DFG + I+ G T
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 503
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
GT Y+APE + D ++FGVLL E+++G+
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 13/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R R I + YL
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYL 264
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H S +++RDLK N++LD D + KI+DFG + G ++ A GT Y+APE
Sbjct: 265 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEV 320
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 354
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + + + I
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTF 147
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 199
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + + + I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTF 154
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 206
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTF 154
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 206
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 88/216 (40%), Gaps = 13/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R R I + YL
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYL 267
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H S +++RDLK N++LD D + KI+DFG + G ++ A GT Y+APE
Sbjct: 268 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEV 323
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 357
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F +G G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D K++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTF 154
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 206
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LKE ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 224 LGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKEFK---NEVNLIAKLQHKNLVRXXX 279
LG G FG V+ + +G+ A+K L + LK+ + +E +++ + H ++R
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIAR--------GILYL 331
I +Y+ L F R Q N +A+ + YL
Sbjct: 74 TFQDAQQIFMIMDYIEGGEL----FSLLRKSQ-------RFPNPVAKFYAAEVCLALEYL 122
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H II+RDLK N+LLD + + KI+DFG A+ T + GT Y+APE
Sbjct: 123 HSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEV 174
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
++ D +SFG+L+ E+++G
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 216 NHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIA 267
+++ +LG G F V K G K I KR +++S +G+ ++ + EV+++
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK-KRRTKSSRRGVSREDIEREVSILK 69
Query: 268 KLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIAR 326
++QH N++ I E + L FD L + + I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGEL----FDFLAEKESLTEEEATEFLKQILN 125
Query: 327 GILYLHEDSRLKIIHRDLKASNVLLDDDMNPK----ISDFGTA-RIFGGNQNQANTNIIA 381
G+ YLH L+I H DLK N++L D PK I DFG A +I GN+ + I
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----IF 178
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
GT ++APE +++D++S GV+ ++SG
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
++++ + +LG+G F V + G K I K+LS + ++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
LQH N+VR +++ + L + + D I I I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESI 118
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMN---PKISDFGTARIFGGNQNQANTNIIAGTYG 385
Y H + I+HR+LK N+LL K++DFG A N ++A + AGT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 172
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE +S D+++ GV+L ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + + + I
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTF 147
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 148 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 199
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 258 EFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSL---DVHLF--DATRSVQL 312
+FKNE+ +I ++++ + IYEYM N S+ D + F D + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 313 DWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQ 372
+ II + Y+H + I HRD+K SN+L+D + K+SDFG + +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 373 NQANTNIIAGTYGYMAPEY--AMGGIFSIKSDVFSFGVLL 410
+ + GTY +M PE+ K D++S G+ L
Sbjct: 207 IKGS----RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+P + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
++++ + +LG+G F V + G K I K+LS + ++ + E + K
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 60
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
LQH N+VR +++ + L + + D I I I
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESI 117
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMN---PKISDFGTARIFGGNQNQANTNIIAGTYG 385
Y H + I+HR+LK N+LL K++DFG A N ++A + AGT G
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 171
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE +S D+++ GV+L ++ G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLADGKAI--AVKRLSRTSGQGLKEFKNEVNLIAKLQHKN 273
+++ EN +G+G +G V K + G I A K++ + + + FK E+ ++ L H N
Sbjct: 9 QYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHE 333
++R + E L + + D R I+ + + Y H
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH- 123
Query: 334 DSRLKIIHRDLKASNVLL--DDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
+L + HRDLK N L D +P K+ DFG A F + GT Y++P+
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ 178
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+ G++ + D +S GV++ ++ G
Sbjct: 179 -VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY P + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 51/226 (22%)
Query: 215 TNHFSDENKLGQGGFGPVY----KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
++ + KLG G +G V K T A+ +K+ S T+ +EV ++ +L
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKS-----LDVH----LFDATRSVQLDWKRRLS-- 319
H N+++ +YE+ +K ++V+ LFD ++ +++ S
Sbjct: 80 HPNIMK-------------LYEFFEDKRNYYLVMEVYRGGELFD-----EIILRQKFSEV 121
Query: 320 ----IINGIARGILYLHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIF--GG 370
I+ + G YLH+ + I+HRDLK N+LL+ D KI DFG + F GG
Sbjct: 122 DAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 371 NQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
+ GT Y+APE + + K DV+S GV+L ++ G
Sbjct: 179 KMKER-----LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLADGKAI--AVKRLSRTSGQGLKEFKNEVNLIAKLQHKN 273
+++ EN +G+G +G V K + G I A K++ + + + FK E+ ++ L H N
Sbjct: 26 QYYTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHE 333
++R + E L + + D R I+ + + Y H
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR---IMKDVLSAVAYCH- 140
Query: 334 DSRLKIIHRDLKASNVLL--DDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
+L + HRDLK N L D +P K+ DFG A F + GT Y++P+
Sbjct: 141 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ 195
Query: 391 YAMGGIFSIKSDVFSFGVLLLEIISG 416
+ G++ + D +S GV++ ++ G
Sbjct: 196 -VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTF 155
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 207
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 19/239 (7%)
Query: 223 KLGQGGFGPVYKGT-LADGKAIAVKRLSRT-SGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+LG+G +G V K + G+ AVKR+ T + Q K ++++ +
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 281 XXXXXXXXXIYEYMPNKSLDV---HLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
I + + SLD + D +++ D ++++ I + + +LH S+L
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHLH--SKL 156
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI- 396
+IHRD+K SNVL++ K DFG I G + +I AG Y APE +
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFG---ISGYLVDDVAKDIDAGCKPYXAPERINPELN 213
Query: 397 ---FSIKSDVFSFGVLLLEIISGR---KNNGFYFSEHGQTLLTYTWKLWCEGHAVELID 449
+S+KSD++S G+ +E+ R + G F + Q + + +L + + E +D
Sbjct: 214 QKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 272
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR--IFGGNQNQANTNIIA 381
IA G+ +L II+RDLK NV+LD + + KI+DFG + I+ G T
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG----VTTKXFC 182
Query: 382 GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
GT Y+APE + D ++FGVLL E+++G+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
++++ + +LG+G F V + G K I K+LS + ++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
LQH N+VR +++ + L + + D I I I
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH---CIQQILESI 118
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYG 385
Y H + I+HR+LK N+LL K++DFG A N ++A + AGT G
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA-WHGFAGTPG 172
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE +S D+++ GV+L ++ G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTF 155
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 207
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTF 155
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 207
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY P + HL R + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTF 155
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+++D K++DFG A+ G T + GT Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLA 207
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N LQ
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY+P + HL R + + + I
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTF 175
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D +++DFG A+ G T + GT Y+A
Sbjct: 176 EYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLA 227
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT 377
L I IA + +LH ++HRDLK SN+ D K+ DFG + +Q++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQ 221
Query: 378 NIIA------------GTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEII 414
++ GT YM+PE G +S K D+FS G++L E++
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVR 276
+G+GGFG V++ D A+KR+ + + +E EV +AKL+H +VR
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVR 68
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 193 GGEQQAESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKR-LSR 250
G +Q +S E P + + + K+GQG FG V+K G+ +A+K+ L
Sbjct: 1 GPAKQYDSVECPF------CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME 54
Query: 251 TSGQGLK-EFKNEVNLIAKLQHKNLVRXXXXXXXXXX-----XXXIYEYMPNKSLDVHLF 304
+G E+ ++ L+H+N+V IY D+
Sbjct: 55 NEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGL 114
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ V+ ++ + G+ Y+H R KI+HRD+KA+NVL+ D K++DFG
Sbjct: 115 LSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGL 171
Query: 365 ARIFGGNQN-QAN--TNIIAGTYGYMAPEYAMG 394
AR F +N Q N N + T Y PE +G
Sbjct: 172 ARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLG 203
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 216 NHFSDENKLGQGGFGPVYKGTL--ADGK--AIAVKRLSR--TSGQGLKEFKNEVNLIAKL 269
F+ LG+G FG V + L DG +AVK L + ++EF E + +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 270 QHKNLVRXXXXXXXXXXX------XXIYEYMPNKSLDVHLFDATRSV-----QLDWKRRL 318
H ++ + I +M K D+H F + L + +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFM--KHGDLHAFLLASRIGENPFNLPLQTLV 140
Query: 319 SIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTAR-IFGGN---QNQ 374
+ IA G+ YL S IHRDL A N +L +DM ++DFG +R I+ G+ Q
Sbjct: 141 RFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIIS 415
A+ + ++A E ++++ SDV++FGV + EI++
Sbjct: 198 ASKLPVK----WLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
LG+G FG V++ K + + + G K E++++ +H+N++
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 284 XXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRD 343
I+E++ LD+ T + +L+ + +S ++ + + +LH + I H D
Sbjct: 73 MEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFD 127
Query: 344 LKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKS 401
++ N++ + KI +FG AR N ++ Y APE + S +
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 402 DVFSFGVLLLEIISG 416
D++S G L+ ++SG
Sbjct: 185 DMWSLGTLVYVLLSG 199
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 218 FSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVR 276
+ D LG GG G V+ D K +A+K++ T Q +K E+ +I +L H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 277 XXX--------------XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIIN 322
+ EYM +V + L+ RL +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANV----LEQGPLLEEHARL-FMY 127
Query: 323 GIARGILYLHEDSRLKIIHRDLKASNVLLD-DDMNPKISDFGTARIFGGNQNQANTNIIA 381
+ RG+ Y+H + ++HRDLK +N+ ++ +D+ KI DFG ARI + + ++
Sbjct: 128 QLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG-HLSE 183
Query: 382 G--TYGYMAPEYAMG-GIFSIKSDVFSFGVLLLEIISGR 417
G T Y +P + ++ D+++ G + E+++G+
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKN 273
+LG G F V K G K I KR SR S +G+ +E + EV+++ ++ H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYLH 332
++ I E + L FD + L + S I I G+ YLH
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNP----KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
KI H DLK N++L D P K+ DFG A N I GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE +++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 193 GGEQQAESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKR-LSR 250
G +Q +S E P + + + K+GQG FG V+K G+ +A+K+ L
Sbjct: 1 GPAKQYDSVECPF------CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME 54
Query: 251 TSGQGLK-EFKNEVNLIAKLQHKNLVRXXXXXXXXXX-----XXXIYEYMPNKSLDVHLF 304
+G E+ ++ L+H+N+V IY D+
Sbjct: 55 NEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGL 114
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ V+ ++ + G+ Y+H R KI+HRD+KA+NVL+ D K++DFG
Sbjct: 115 LSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGL 171
Query: 365 ARIFGGNQN-QAN--TNIIAGTYGYMAPEYAMG 394
AR F +N Q N N + T Y PE +G
Sbjct: 172 ARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLG 203
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I+ G+ +LH + II+RDLK NV+LD + + KI+DFG + + T GT
Sbjct: 129 ISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGT 183
Query: 384 YGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
Y+APE + D +++GVLL E+++G+
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + + EY P + HL R + + + I YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY P + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKN 273
+LG G F V K G K I KR SR S +G+ +E + EV+++ ++ H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYLH 332
++ I E + L FD + L + S I I G+ YLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNP----KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
KI H DLK N++L D P K+ DFG A N I GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE +++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 22/233 (9%)
Query: 193 GGEQQAESQEFPLFPLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKR-LSR 250
G +Q +S E P + + + K+GQG FG V+K G+ +A+K+ L
Sbjct: 1 GPAKQYDSVECPF------CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLME 54
Query: 251 TSGQGLK-EFKNEVNLIAKLQHKNLVRXXXXXXXXXX-----XXXIYEYMPNKSLDVHLF 304
+G E+ ++ L+H+N+V IY D+
Sbjct: 55 NEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGL 114
Query: 305 DATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGT 364
+ V+ ++ + G+ Y+H R KI+HRD+KA+NVL+ D K++DFG
Sbjct: 115 LSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGL 171
Query: 365 ARIFGGNQN-QAN--TNIIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEI 413
AR F +N Q N N + T Y PE +G + D++ G ++ E+
Sbjct: 172 ARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I + + YL E + +IHRD+K SN+LLD+ K+ DFG I G + + AG
Sbjct: 133 IVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDKAKDRSAGC 187
Query: 384 YGYMAPEY-----AMGGIFSIKSDVFSFGVLLLEIISGR 417
YMAPE + I++DV+S G+ L+E+ +G+
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 51/226 (22%)
Query: 215 TNHFSDENKLGQGGFGPVY----KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ 270
++ + KLG G +G V K T A+ +K+ S T+ +EV ++ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKS-----LDVH----LFDATRSVQLDWKRRLS-- 319
H N+++ +YE+ +K ++V+ LFD ++ +++ S
Sbjct: 63 HPNIMK-------------LYEFFEDKRNYYLVMEVYRGGELFD-----EIILRQKFSEV 104
Query: 320 ----IINGIARGILYLHEDSRLKIIHRDLKASNVLLDD---DMNPKISDFGTARIF--GG 370
I+ + G YLH+ + I+HRDLK N+LL+ D KI DFG + F GG
Sbjct: 105 DAAVIMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 371 NQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
+ GT Y+APE + + K DV+S GV+L ++ G
Sbjct: 162 KMKER-----LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKN 273
+LG G F V K G K I KR SR S +G+ +E + EV+++ ++ H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYLH 332
++ I E + L FD + L + S I I G+ YLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNP----KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
KI H DLK N++L D P K+ DFG A N I GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE +++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKN 273
+LG G F V K G K I KR SR S +G+ +E + EV+++ ++ H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYLH 332
++ I E + L FD + L + S I I G+ YLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNP----KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
KI H DLK N++L D P K+ DFG A N I GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE +++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + + EY P + HL R + I YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKN 273
+LG G F V K G K I KR SR S +G+ +E + EV+++ ++ H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYLH 332
++ I E + L FD + L + S I I G+ YLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNP----KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
KI H DLK N++L D P K+ DFG A N I GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE +++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 16/223 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQ--GLKEFKNEV 263
P + ++ F ++ LG+G +G V T G+ +A+K++ L+ + E+
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EI 60
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++ +H+N++ Y+ + + L + L I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQ--------NQA 375
R + LH + +IHRDLK SN+L++ + + K+ DFG ARI + Q+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 376 NTNIIAGTYGYMAPEYAM-GGIFSIKSDVFSFGVLLLEIISGR 417
T Y APE + +S DV+S G +L E+ R
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + + EY P + HL R + + + I YL
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D K++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 16/223 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQ--GLKEFKNEV 263
P + ++ F ++ LG+G +G V T G+ +A+K++ L+ + E+
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EI 60
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++ +H+N++ Y+ + + L + L I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQ--------NQA 375
R + LH + +IHRDLK SN+L++ + + K+ DFG ARI + Q+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 376 NTNIIAGTYGYMAPEYAM-GGIFSIKSDVFSFGVLLLEIISGR 417
T Y APE + +S DV+S G +L E+ R
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 178
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ-HKNLVRXXXXX 281
LG+G + V +L +GK AVK + + +G EV + + Q +KN++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 282 XXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIH 341
++E + S+ H+ + + + ++ +A + +LH I H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 342 RDLKASNVLLD--DDMNP-KISDFGTARIFGGNQNQANTNIIA-------GTYGYMAPEY 391
RDLK N+L + + ++P KI DF G N + T I G+ YMAPE
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGS--GMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 392 A-----MGGIFSIKSDVFSFGVLLLEIISG 416
+ + D++S GV+L ++SG
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 179
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 222
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 15/212 (7%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXX 283
+G+G +G V++G L G+++AVK S Q + E+ L+H N++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 284 XXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED-----SRLK 338
+ + L+D + L+ L + A G+ +LH + +
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 339 IIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPEYAMGGI 396
I HRD K+ NVL+ ++ I+D G A + G + N GT YMAPE I
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQI 193
Query: 397 FS------IKSDVFSFGVLLLEIISGRKNNGF 422
+ +D+++FG++L EI NG
Sbjct: 194 RTDCFESYKWTDIWAFGLVLWEIARRTIVNGI 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 179
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 121
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 122 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEV 176
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
+LG+G F V + G K I K+LS Q L+ E + L+H N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIV 84
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
R I++ + L + + D I I +L+ H+
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAVLHCHQ-- 139
Query: 336 RLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
+ ++HRDLK N+LL + K++DFG A G Q QA AGT GY++PE
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGF-AGTPGYLSPEVL 196
Query: 393 MGGIFSIKSDVFSFGVLLLEIISG 416
+ D+++ GV+L ++ G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 222 NKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGL--KEFKNEVNLIAKLQHKN 273
+LG G F V K G K I KR SR S +G+ +E + EV+++ ++ H N
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIK-KRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 274 LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYLH 332
++ I E + L FD + L + S I I G+ YLH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGEL----FDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 333 EDSRLKIIHRDLKASNVLLDDDMNP----KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
KI H DLK N++L D P K+ DFG A N I GT ++A
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVA 186
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE +++D++S GV+ ++SG
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 179
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 124
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 125 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEV 179
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 213
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 121
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 122 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEV 176
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 20/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
T+ + +G+G F V + G K I K+LS Q L+ E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR +++ + L + + D I I +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAV 116
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYG 385
L+ H+ + ++HRDLK N+LL K++DFG A G+Q QA AGT G
Sbjct: 117 LHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGF-AGTPG 171
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE + D+++ GV+L ++ G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 185
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 228
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 121
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 122 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEV 176
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 121
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 122 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEV 176
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 210
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 223 KLGQGGFGPVYKGT-LADGKAIAVKR-LSRTSGQGLK-EFKNEVNLIAKLQHKNLVRXXX 279
K+GQG FG V+K G+ +A+K+ L +G E+ ++ L+H+N+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 280 XXXXXXX-----XXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
IY D+ + V+ ++ + G+ Y+H
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH-- 141
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQN-QAN--TNIIAGTYGYMAPEY 391
R KI+HRD+KA+NVL+ D K++DFG AR F +N Q N N + T Y PE
Sbjct: 142 -RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPEL 199
Query: 392 AMG 394
+G
Sbjct: 200 LLG 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 126
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 127 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEV 181
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 215
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 14/216 (6%)
Query: 216 NHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKN---EVNLIAKLQH 271
N F LG+G FG V A G+ A+K L + E + E ++ +H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
L + EY L HL +R +R I + YL
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYL 121
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H SR +++RD+K N++LD D + KI+DFG + G + A GT Y+APE
Sbjct: 122 H--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEV 176
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
+ D + GV++ E++ GR FY +H
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDH 210
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 224 LGQGGFGPVY---KGTLAD-GKAIAVKRLSRTS----GQGLKEFKNEVNLIAKL-QHKNL 274
LG G +G V+ K + D GK A+K L + + + + + E ++ + Q L
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED 334
V I +Y+ L HL R + + + + I + +LH
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ---IYVGEIVLALEHLH-- 176
Query: 335 SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMG 394
+L II+RD+K N+LLD + + ++DFG ++ F ++ + + GT YMAP+ G
Sbjct: 177 -KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIEYMAPDIVRG 234
Query: 395 GI--FSIKSDVFSFGVLLLEIISG 416
G D +S GVL+ E+++G
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 216 NHFSDENKLGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
+ F LG G FG V +K T G A+K L + LK+ ++ +N Q
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 272 KN---LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
N LV+ + EY P + HL R + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA---QIVLTF 155
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
YLH L +I+RDLK N+L+D K++DFG A+ G T + GT Y+A
Sbjct: 156 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTPEYLA 207
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + ++ D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 16/223 (7%)
Query: 207 PLGLALEATNHFSDENKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQ--GLKEFKNEV 263
P + ++ F ++ LG+G +G V T G+ +A+K++ L+ + E+
Sbjct: 2 PKRIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EI 60
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++ +H+N++ Y+ + + L + L I
Sbjct: 61 KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ 120
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQ--------NQA 375
R + LH + +IHRDLK SN+L++ + + K+ DFG ARI + Q+
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 376 NTNIIAGTYGYMAPEYAM-GGIFSIKSDVFSFGVLLLEIISGR 417
T Y APE + +S DV+S G +L E+ R
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 224 LGQGGFGPVYKGTLADGKA----IAVKRLSRTSGQGLKEFKN---EVNLIAK-LQHKNLV 275
+G+G FG V LA KA AVK L + + KE K+ E N++ K ++H LV
Sbjct: 46 IGKGSFGKV---LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ +Y+ L HL L+ + R IA + YLH
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAE-IASALGYLHS-- 157
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
L I++RDLK N+LLD + ++DFG + ++ + T+ GT Y+APE
Sbjct: 158 -LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+ D + G +L E++ G
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYG 235
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 304
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 347
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 16/107 (14%)
Query: 327 GILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
+ YLHE+ IIHRDLK NVLL ++D KI+DFG ++I G + + GT
Sbjct: 265 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGT 318
Query: 384 YGYMAPEYAMG---GIFSIKSDVFSFGVLLLEIISGRKNNGFYFSEH 427
Y+APE + ++ D +S GV+L +SG FSEH
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP----FSEH 361
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T +AGT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLAGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 213 EATNHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRT--------SGQGLKEFKNEV 263
E + +S + LG G FG V+ + K + VK + + L + E+
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 264 NLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIING 323
++++++H N+++ + E LD+ F R +LD I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAF-IDRHPRLDEPLASYIFRQ 138
Query: 324 IARGILYLHEDSRLK-IIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAG 382
+ + YL RLK IIHRD+K N+++ +D K+ DFG+A + G
Sbjct: 139 LVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCG 191
Query: 383 TYGYMAPEYAMGGIF-SIKSDVFSFGVLLLEII 414
T Y APE MG + + +++S GV L ++
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVY-KGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 217 HFSDENKL----GQGGFGPVYKGTLADGKA---IAVKRLSRTSGQGLKE-FKNEVNLIAK 268
H SD +L G G FG + D +A +AVK + R G+ + E K E+
Sbjct: 16 HDSDRYELVKDIGAGNFG--VARLMRDKQANELVAVKYIER--GEKIDENVKREIINHRS 71
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR + EY L + +A R + + + + G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---FFFQQLISGV 128
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGY 386
Y H +++ HRDLK N LLD P KI+DFG ++ + + GT Y
Sbjct: 129 SYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAY 182
Query: 387 MAPEYAMGGIFSIK-SDVFSFGVLLLEIISG 416
+APE + + K +DV+S GV L ++ G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 144
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D+ +++DFG A+ G T + GT Y+APE
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 196
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLAD----GKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G A+A+K + ++E F E + + H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 213 EATNHFSDENKLGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKEFK-NEVNLIAKLQ 270
E + + + +LG+G FG V++ G AVK++ L+ F+ E+ A L
Sbjct: 69 EEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR------LEVFRVEELVACAGLS 122
Query: 271 HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
+V E + SL L + D R L + G+ Y
Sbjct: 123 SPRIVPLYGAVREGPWVNIFMELLEGGSLG-QLIKQMGCLPED--RALYYLGQALEGLEY 179
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMN-PKISDFGTARIF---GGNQNQANTNIIAGTYGY 386
LH +I+H D+KA NVLL D + + DFG A G ++ + I GT +
Sbjct: 180 LHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 236
Query: 387 MAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYF 424
MAPE MG K D++S ++L +++G YF
Sbjct: 237 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 274
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 224 LGQGGFG--PVYKGTLADGKAIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXXXX 280
+G G FG + + L + +AVK + R G + E + E+ L+H N+VR
Sbjct: 28 IGSGNFGVARLMRDKLT-KELVAVKYIER--GAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
I EY L + +A R + + + + G+ Y H ++I
Sbjct: 85 ILTPTHLAIIMEYASGGELYERICNAGRFSEDEAR---FFFQQLLSGVSYCHS---MQIC 138
Query: 341 HRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFS 398
HRDLK N LLD P KI DFG ++ + +T GT Y+APE + +
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLLRQEYD 195
Query: 399 IK-SDVFSFGVLLLEIISG 416
K +DV+S GV L ++ G
Sbjct: 196 GKIADVWSCGVTLYVMLVG 214
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 152
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 204
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDD-MNPKISDFGTARIF---GGN 371
R L + G+ YLH +I+H D+KA NVLL D + DFG A G
Sbjct: 167 RALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 223
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYF 424
++ + I GT +MAPE MG K D++S ++L +++G YF
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 276
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDD-MNPKISDFGTARIF---GGN 371
R L + G+ YLH SR +I+H D+KA NVLL D + + DFG A G
Sbjct: 167 RALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 223
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
++ + I GT +MAPE +G K DV+S ++L +++G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA---QIVLTFEYL 178
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 230
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDMN-PKISDFGTARIF---GGN 371
R L + G+ YLH +I+H D+KA NVLL D + + DFG A G
Sbjct: 151 RALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGRKNNGFYF 424
++ + I GT +MAPE MG K D++S ++L +++G YF
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 221 ENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ-HKNLVRXX 278
E+ LG+G V L + AVK + + G EV ++ + Q H+N++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
++E M S+ H+ +L+ ++ +A + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS---VVVQDVASALDFLHNKG--- 131
Query: 339 IIHRDLKASNVLLD--DDMNP-KISDF--GTARIFGGNQNQANTNII---AGTYGYMAPE 390
I HRDLK N+L + + ++P KI DF G+ G+ + +T + G+ YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 391 YA-----MGGIFSIKSDVFSFGVLLLEIISG 416
I+ + D++S GV+L ++SG
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 316 RRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDD-MNPKISDFGTARIF---GGN 371
R L + G+ YLH SR +I+H D+KA NVLL D + + DFG A G
Sbjct: 186 RALYYLGQALEGLEYLH--SR-RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
Query: 372 QNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
++ + I GT +MAPE +G K DV+S ++L +++G
Sbjct: 243 KSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 221 ENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQ-HKNLVRXX 278
E+ LG+G V L + AVK + + G EV ++ + Q H+N++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 279 XXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
++E M S+ H+ +L+ ++ +A + +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS---VVVQDVASALDFLHNKG--- 131
Query: 339 IIHRDLKASNVLLD--DDMNP-KISDF--GTARIFGGNQNQANTNII---AGTYGYMAPE 390
I HRDLK N+L + + ++P KI DF G+ G+ + +T + G+ YMAPE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 391 YA-----MGGIFSIKSDVFSFGVLLLEIISG 416
I+ + D++S GV+L ++SG
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 210
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 15/183 (8%)
Query: 241 KAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD 300
K + V + + + G ++ K E ++ L+H ++V ++E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 113
Query: 301 VHLFDATRSVQLDWKRRLSIINGIARGIL----YLHEDSRLKIIHRDLKASNVLLDDDMN 356
F+ + + ++ + R IL Y H+++ IIHRD+K VLL N
Sbjct: 114 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN 168
Query: 357 P---KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI 413
K+ FG A G + A + GT +MAPE + DV+ GV+L +
Sbjct: 169 SAPVKLGGFGVAIQLGESGLVAGGRV--GTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226
Query: 414 ISG 416
+SG
Sbjct: 227 LSG 229
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 15/183 (8%)
Query: 241 KAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLD 300
K + V + + + G ++ K E ++ L+H ++V ++E+M L
Sbjct: 57 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL- 115
Query: 301 VHLFDATRSVQLDWKRRLSIINGIARGIL----YLHEDSRLKIIHRDLKASNVLLDDDMN 356
F+ + + ++ + R IL Y H+++ IIHRD+K VLL N
Sbjct: 116 --CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKEN 170
Query: 357 P---KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEI 413
K+ FG A G + A + GT +MAPE + DV+ GV+L +
Sbjct: 171 SAPVKLGGFGVAIQLGESGLVAGGRV--GTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 228
Query: 414 ISG 416
+SG
Sbjct: 229 LSG 231
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 127
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLXGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 178
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTLCGTPEYLAPEI 230
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 132
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 217 HFSDENKL----GQGGFGPVYKGTLADGKA---IAVKRLSRTSGQGLKE-FKNEVNLIAK 268
H SD +L G G FG + D ++ +AVK + R G+ + E K E+
Sbjct: 15 HDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRS 70
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR + EY L + +A R + + + + G+
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---FFFQQLISGV 127
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGY 386
Y H +++ HRDLK N LLD P KI DFG ++ + +T GT Y
Sbjct: 128 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 181
Query: 387 MAPEYAMGGIFSIK-SDVFSFGVLLLEIISG 416
+APE + + K +DV+S GV L ++ G
Sbjct: 182 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 158
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 247
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 135
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 224
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 133
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ + K+ DFG +R + + + +MAPE F
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 14/208 (6%)
Query: 215 TNHFSDENKLGQGGFGPV---YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQH 271
T+ + +LG+G F V K T A + + S + ++ + E + L+H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 272 KNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
N+VR +++ + L + + D I+ I + ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIHQILESVNHI 146
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYGYMA 388
H+ I+HRDLK N+LL K++DFG A G Q QA AGT GY++
Sbjct: 147 HQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ-QAWFGF-AGTPGYLS 201
Query: 389 PEYAMGGIFSIKSDVFSFGVLLLEIISG 416
PE + D+++ GV+L ++ G
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
T + +LG+G F V + G I K+LS Q L+ E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR I++ + L + + D I I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH---CIQQILEAV 123
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYG 385
L+ H+ + ++HR+LK N+LL + K++DFG A G Q QA AGT G
Sbjct: 124 LHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGF-AGTPG 178
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE + D+++ GV+L ++ G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 224 LGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVR 276
+G+G FG V +K T K A+K LS+ + F E +++A +V+
Sbjct: 82 IGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ EYMP L V+L + V W R + A +L L
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDL-VNLM-SNYDVPEKWARFYT-----AEVVLALDAIHS 191
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMG-- 394
+ IHRD+K N+LLD + K++DFGT + + GT Y++PE
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 395 --GIFSIKSDVFSFGVLLLEIISG 416
G + + D +S GV L E++ G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 224 LGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVR 276
+G+G FG V +K T K A+K LS+ + F E +++A +V+
Sbjct: 82 IGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 138
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ EYMP L V+L + V W R + A +L L
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDL-VNLM-SNYDVPEKWARFYT-----AEVVLALDAIHS 191
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMG-- 394
+ IHRD+K N+LLD + K++DFGT + + GT Y++PE
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 395 --GIFSIKSDVFSFGVLLLEIISG 416
G + + D +S GV L E++ G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 224 LGQGGFGPV----YKGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVR 276
+G+G FG V +K T K A+K LS+ + F E +++A +V+
Sbjct: 77 IGRGAFGEVQLVRHKST---RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 133
Query: 277 XXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+ EYMP L V+L + V W R + A +L L
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDL-VNLM-SNYDVPEKWARFYT-----AEVVLALDAIHS 186
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMG-- 394
+ IHRD+K N+LLD + K++DFGT + + + GT Y++PE
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 395 --GIFSIKSDVFSFGVLLLEIISG 416
G + + D +S GV L E++ G
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 130
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGIF 397
+ +HRD+ A NVL+ K+ DFG +R + + + +MAPE F
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 398 SIKSDVFSFGVLLLEII-------SGRKNN 420
+ SDV+ FGV + EI+ G KNN
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ ++ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 224 LGQGGFGPVYKGTLA-DGKAIAVKRLSRTSG--QGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G G +G V G+ +A+K++ K E+ ++ +H N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 281 XXXXX---XXXXIYEYMPNKSLDVH-LFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+Y + D+H + +++ + L+ R + + RG+ Y+H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHS--- 177
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPEYAMG 394
++IHRDLK SN+L++++ KI DFG AR ++Q T Y APE +
Sbjct: 178 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 395 -GIFSIKSDVFSFGVLLLEIISGRK 418
++ D++S G + E+++ R+
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+++D +++DFG A+ G T + GT Y+APE
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 224 LGQGGFGPVYKGTLA-DGKAIAVKRLSRTSG--QGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+G G +G V G+ +A+K++ K E+ ++ +H N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 281 XXXXX---XXXXIYEYMPNKSLDVH-LFDATRSVQLDWKRRLSIINGIARGILYLHEDSR 336
+Y + D+H + +++ + L+ R + + RG+ Y+H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHS--- 176
Query: 337 LKIIHRDLKASNVLLDDDMNPKISDFGTARIF--GGNQNQANTNIIAGTYGYMAPEYAMG 394
++IHRDLK SN+L++++ KI DFG AR ++Q T Y APE +
Sbjct: 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 236
Query: 395 -GIFSIKSDVFSFGVLLLEIISGRK 418
++ D++S G + E+++ R+
Sbjct: 237 LHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG-----YMAPEYA 392
+ +HRD+ A NVL+ + K+ DFG +R ++ + G +MAPE
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------EDSTYYKASKGKLPIKWMAPESI 564
Query: 393 MGGIFSIKSDVFSFGVLLLEII-------SGRKNN 420
F+ SDV+ FGV + EI+ G KNN
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 133/327 (40%), Gaps = 61/327 (18%)
Query: 192 RGGEQQAESQ--EFPLFPLGLALEATNHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRL 248
RGG++ +S+ P F L N E LG G G V ++G+ G+ +AVKR+
Sbjct: 11 RGGKKGRKSRIANIPNFEQSLK----NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRM 65
Query: 249 SRTSGQGLKEFKN----EVNLIAKLQ-HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDV-- 301
L +F + E+ L+ + H N++R E D+
Sbjct: 66 -------LIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE 118
Query: 302 --HLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLD------- 352
++ D +Q ++ +S++ IA G+ +LH LKIIHRDLK N+L+
Sbjct: 119 SKNVSDENLKLQKEYNP-ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTA 174
Query: 353 ------DDMNPKISDFGTARIFGGNQN--QANTNIIAGTYGYMAPEY---AMGGIFSIKS 401
+++ ISDFG + Q + N N +GT G+ APE + +
Sbjct: 175 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSI 234
Query: 402 DVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDEL 461
D+FS G + I+S K+ + K E + + I + + C D
Sbjct: 235 DIFSMGCVFYYILSKGKH-------------PFGDKYSRESNIIRGIFSLDEMKCLHDRS 281
Query: 462 LKFIHIGLLC--VQQDPADRPTMSSVV 486
L L+ + DP RPT V+
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKVL 308
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 16/201 (7%)
Query: 224 LGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKE---FKNEVNLIAKLQHKNLVRXXX 279
+G+G FG V A K A+K LS+ + F E +++A +V+
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 280 XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKI 339
+ EYMP L V+L + V W + + A +L L + +
Sbjct: 143 AFQDDKYLYMVMEYMPGGDL-VNLM-SNYDVPEKWAKFYT-----AEVVLALDAIHSMGL 195
Query: 340 IHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMG----G 395
IHRD+K N+LLD + K++DFGT + + GT Y++PE G
Sbjct: 196 IHRDVKPDNMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGDG 254
Query: 396 IFSIKSDVFSFGVLLLEIISG 416
+ + D +S GV L E++ G
Sbjct: 255 YYGRECDWWSVGVFLFEMLVG 275
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 133/327 (40%), Gaps = 61/327 (18%)
Query: 192 RGGEQQAESQ--EFPLFPLGLALEATNHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRL 248
RGG++ +S+ P F L N E LG G G V ++G+ G+ +AVKR+
Sbjct: 11 RGGKKGRKSRIANIPNFEQSLK----NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRM 65
Query: 249 SRTSGQGLKEFKN----EVNLIAKLQ-HKNLVRXXXXXXXXXXXXXIYEYMPNKSLDV-- 301
L +F + E+ L+ + H N++R E D+
Sbjct: 66 -------LIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE 118
Query: 302 --HLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKIIHRDLKASNVLLD------- 352
++ D +Q ++ +S++ IA G+ +LH LKIIHRDLK N+L+
Sbjct: 119 SKNVSDENLKLQKEYNP-ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTA 174
Query: 353 ------DDMNPKISDFGTARIFGGNQN--QANTNIIAGTYGYMAPEY---AMGGIFSIKS 401
+++ ISDFG + Q + N N +GT G+ APE + +
Sbjct: 175 DQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSI 234
Query: 402 DVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPVLKQSCAPDEL 461
D+FS G + I+S K+ + K E + + I + + C D
Sbjct: 235 DIFSMGCVFYYILSKGKH-------------PFGDKYSRESNIIRGIFSLDEMKCLHDRS 281
Query: 462 LKFIHIGLLC--VQQDPADRPTMSSVV 486
L L+ + DP RPT V+
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKVL 308
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 217 HFSDENKL----GQGGFGPVYKGTLADGKA---IAVKRLSRTSGQGLK-EFKNEVNLIAK 268
H SD +L G G FG + D ++ +AVK + R G+ + K E+
Sbjct: 16 HDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER--GEKIAANVKREIINHRS 71
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR + EY L + +A R + + + + G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---FFFQQLISGV 128
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGY 386
Y H +++ HRDLK N LLD P KI DFG ++ + +T GT Y
Sbjct: 129 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAY 182
Query: 387 MAPEYAMGGIFSIK-SDVFSFGVLLLEIISG 416
+APE + + K +DV+S GV L ++ G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
T+ + +LG+G F V + G K I K+LS Q L+ E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR +++ + L + + D I I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESV 116
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYG 385
+ H + I+HRDLK N+LL K++DFG A G+Q QA AGT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGF-AGTPG 171
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE + D+++ GV+L ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT Y+AP
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEYLAPAI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 215 TNHFSDENKLGQGGFGPV-YKGTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN 273
H+ KLG+GGF V L DG A+KR+ Q +E + E ++ H N
Sbjct: 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPN 87
Query: 274 LVRXXXX-XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQ-----LDWKRRLSIINGIARG 327
++R + +P L++ ++ L + L ++ GI RG
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGT-LWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 328 ILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTA-----RIFGGNQNQANTNIIAG 382
+ +H HRDLK +N+LL D+ P + D G+ + G Q + A
Sbjct: 147 LEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 383 --TYGYMAPEYAMGGIFSIKS--------DVFSFGVLLLEIISGR 417
T Y APE +FS++S DV+S G +L ++ G
Sbjct: 204 RCTISYRAPE-----LFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 20/211 (9%)
Query: 215 TNHFSDENKLGQGGFGPVYK------GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAK 268
T+ + +LG+G F V + G K I K+LS Q L+ E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR +++ + L + + D I I +
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASH---CIQQILESV 116
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP---KISDFGTARIFGGNQNQANTNIIAGTYG 385
+ H + I+HRDLK N+LL K++DFG A G+Q QA AGT G
Sbjct: 117 NHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGF-AGTPG 171
Query: 386 YMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
Y++PE + D+++ GV+L ++ G
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 217 HFSDENKL----GQGGFGPVYKGTLADGKA---IAVKRLSRTSGQGLKE-FKNEVNLIAK 268
H SD +L G G FG + D ++ +AVK + R G+ + E K E+
Sbjct: 16 HDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRS 71
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR + EY L + +A R + + + + G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---FFFQQLISGV 128
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGY 386
Y H +++ HRDLK N LLD P KI FG ++ + +T GT Y
Sbjct: 129 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAY 182
Query: 387 MAPEYAMGGIFSIK-SDVFSFGVLLLEIISG 416
+APE + + K +DV+S GV L ++ G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
+S ++G GG V++ + A+K L Q L ++NE+ + KLQ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 72
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ IY M ++D++ + + W+R+ S + + +H+
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG 131
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPE 390
I+H DLK +N L+ D M K+ DFG A NQ Q +T + GT YM PE
Sbjct: 132 ---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 391 YAMGGIFSIKS------------DVFSFGVLLLEIISGR 417
A+ + S + DV+S G +L + G+
Sbjct: 183 -AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
+S ++G GG V++ + A+K L Q L ++NE+ + KLQ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 68
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ IY M ++D++ + + W+R+ S + + +H+
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG 127
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPE 390
I+H DLK +N L+ D M K+ DFG A NQ Q +T + GT YM PE
Sbjct: 128 ---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE 178
Query: 391 YAMGGIFSIKS------------DVFSFGVLLLEIISGR 417
A+ + S + DV+S G +L + G+
Sbjct: 179 -AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
+S ++G GG V++ + A+K L Q L ++NE+ + KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 88
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ IY M ++D++ + + W+R+ S + + +H+
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG 147
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPE 390
I+H DLK +N L+ D M K+ DFG A NQ Q +T + GT YM PE
Sbjct: 148 ---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 391 YAMGGIFSIKS------------DVFSFGVLLLEIISGR 417
A+ + S + DV+S G +L + G+
Sbjct: 199 -AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 24/211 (11%)
Query: 217 HFSDENKL----GQGGFGPVYKGTLADGKA---IAVKRLSRTSGQGLKE-FKNEVNLIAK 268
H SD +L G G FG + D ++ +AVK + R G+ + E K E+
Sbjct: 16 HDSDRYELVKDIGSGNFG--VARLMRDKQSNELVAVKYIER--GEKIDENVKREIINHRS 71
Query: 269 LQHKNLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGI 328
L+H N+VR + EY L + +A R + + + + G+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---FFFQQLISGV 128
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP--KISDFGTARIFGGNQNQANTNIIAGTYGY 386
Y H +++ HRDLK N LLD P KI FG ++ + +T GT Y
Sbjct: 129 SYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAY 182
Query: 387 MAPEYAMGGIFSIK-SDVFSFGVLLLEIISG 416
+APE + + K +DV+S GV L ++ G
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 15/200 (7%)
Query: 222 NKLGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
+LG G FG V++ A G+ K ++ KNE++++ +L H L+
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFD--ATRSVQLDWKRRLSIINGIARGILYLHEDSRLK 338
I E++ LFD A ++ ++ + G+ ++HE S
Sbjct: 117 FEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 339 IIHRDLKASNVLLDDDM--NPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGGI 396
I+H D+K N++ + + KI DFG A ++ + T + APE
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREP 226
Query: 397 FSIKSDVFSFGVLLLEIISG 416
+D+++ GVL ++SG
Sbjct: 227 VGFYTDMWAIGVLGYVLLSG 246
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 224 LGQGGFGPVYKGTLADGK----AIAVKRLSRTSGQGLKE-FKNEVNLIAKLQHKNLVRXX 278
+G+G FG V++G + A+A+K + ++E F E + + H ++V+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 279 XXXXXXXXXXXIYEYMPNKSL-DVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRL 337
++ M +L ++ F R LD + ++ + YL
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK--- 510
Query: 338 KIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYG-----YMAPEYA 392
+ +HRD+ A NVL+ K+ DFG +R ++ + G +MAPE
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYM------EDSTYYKASKGKLPIKWMAPESI 564
Query: 393 MGGIFSIKSDVFSFGVLLLEII-------SGRKNN 420
F+ SDV+ FGV + EI+ G KNN
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 216 NHFSDENKLGQGGFGPVYKGTLAD-GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKN- 273
+ F LG G FG V + G A+K L + LK+ ++ +N LQ N
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 274 --LVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
LV+ + EY+ + HL R + + + I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA---QIVLTFEYL 157
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H L +I+RDLK N+L+D +++DFG A+ G T + GT +APE
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTPEALAPEI 209
Query: 392 AMGGIFSIKSDVFSFGVLLLEIISG 416
+ ++ D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 31/214 (14%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
++G GG V++ + A+K L Q L ++NE+ + KLQ + +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRL 121
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
IY M ++D++ + + W+R+ S + + +H+ I+
Sbjct: 122 YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG---IV 177
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPEYAMGG 395
H DLK +N L+ D M K+ DFG A NQ Q +T + GT YM PE A+
Sbjct: 178 HSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE-AIKD 230
Query: 396 IFSIKS------------DVFSFGVLLLEIISGR 417
+ S + DV+S G +L + G+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
+S ++G GG V++ + A+K L Q L ++NE+ + KLQ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 69
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ IY M ++D++ + + W+R+ S + + +H+
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG 128
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPE 390
I+H DLK +N L+ D M K+ DFG A NQ Q +T + GT YM PE
Sbjct: 129 ---IVHSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 391 YAMGGIFSIKS------------DVFSFGVLLLEIISGR 417
A+ + S + DV+S G +L + G+
Sbjct: 180 -AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLD-------------DDMNPKISDFGT 364
+S++ IA G+ +LH LKIIHRDLK N+L+ +++ ISDFG
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 365 ARIFGGNQNQANTNI--IAGTYGYMAPE-------YAMGGIFSIKSDVFSFGVLLLEIIS 415
+ Q+ TN+ +GT G+ APE + D+FS G + I+S
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 416 GRKN 419
K+
Sbjct: 235 KGKH 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAV-------KRLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
++G+G F VYKG L + V ++L+++ Q FK E + LQH N+V
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIV 88
Query: 276 RXXXXXXXXXXXXX----IYEYMPNKSLDVHL--FDATR-SVQLDWKRRLSIINGIARGI 328
R + E + +L +L F + V W R+ I +G+
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGL 142
Query: 329 LYLHEDSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+LH + IIHRDLK N+ + KI D G A + + + + GT +
Sbjct: 143 QFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFX 197
Query: 388 APEYAMGGIFSIKSDVFSFGVLLLE 412
APE + DV++FG LE
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 224 LGQGGFGPVYKGTLAD--------GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
LGQG F ++KG + + +K L + + F ++++KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ E++ SLD +L + + WK L + +A + +L E++
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAMHFLEENT 133
Query: 336 RLKIIHRDLKASNVLL--DDDM---NP---KISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+IH ++ A N+LL ++D NP K+SD G + +I+ ++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV------LPKDILQERIPWV 184
Query: 388 APEYAMG-GIFSIKSDVFSFGVLLLEIISG 416
PE ++ +D +SFG L EI SG
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 15/104 (14%)
Query: 320 IINGIARGILYLHEDSRLKIIHRDLKASNVL-LDDDMNP---KISDFGTARIFGGNQNQA 375
+++ I + + YLH ++HRDLK SN+L +D+ NP +I DFG A+ Q +A
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 376 NTNIIAG---TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
++ T ++APE + D++S G+LL +++G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 216 NHFSDENKLGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNL 274
+ F E GQG FG V G + G ++A+K++ + +E + +L A L H N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDL-AVLHHPNI 81
Query: 275 VRXXX-------XXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLS-------- 319
V+ + EY+P+ +H R + ++R+++
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDT---LH-----RCCRNYYRRQVAPPPILIKV 133
Query: 320 IINGIARGILYLHEDSRLKIIHRDLKASNVLLDD-DMNPKISDFGTARIFGGNQNQANTN 378
+ + R I LH S + + HRD+K NVL+++ D K+ DFG+A+ + ++ N
Sbjct: 134 FLFQLIRSIGCLHLPS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL--SPSEPNVA 190
Query: 379 IIAGTYGYMAPEYAMGGI-FSIKSDVFSFGVLLLEIISG 416
I Y Y APE G ++ D++S G + E++ G
Sbjct: 191 YICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 28/210 (13%)
Query: 224 LGQGGFGPVYKGTLAD--------GKAIAVKRLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
LGQG F ++KG + + +K L + + F ++++KL HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ E++ SLD +L + + WK L + +A + +L E++
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAWAMHFLEENT 133
Query: 336 RLKIIHRDLKASNVLL--DDDM---NP---KISDFGTARIFGGNQNQANTNIIAGTYGYM 387
+IH ++ A N+LL ++D NP K+SD G + +I+ ++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV------LPKDILQERIPWV 184
Query: 388 APEYAMG-GIFSIKSDVFSFGVLLLEIISG 416
PE ++ +D +SFG L EI SG
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 21/214 (9%)
Query: 218 FSDENKLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLV 275
+S ++G GG V++ + A+K L Q L ++NE+ + KLQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-D 88
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDS 335
+ IY M ++D++ + + W+R+ S + + +H+
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG 147
Query: 336 RLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYAMGG 395
I+H DLK +N L+ D M K+ DFG A + + GT YM PE A+
Sbjct: 148 ---IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE-AIKD 202
Query: 396 IFSIKS------------DVFSFGVLLLEIISGR 417
+ S + DV+S G +L + G+
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV---- 275
+ +G+G FG V++G G+ +AVK S R +E E+ L+H+N++
Sbjct: 9 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 65
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED- 334
+ +Y + SL +L T +V+ K LS +G+A +LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA----HLHMEI 121
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMA 388
+ I HRDLK+ N+L+ + I+D G A + + N GT YMA
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 389 PEYA-----MGGIFSIK-SDVFSFGVLLLEI 413
PE M S K +D+++ G++ EI
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV---- 275
+ +G+G FG V++G G+ +AVK S R +E E+ L+H+N++
Sbjct: 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 103
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED- 334
+ +Y + SL +L T +V+ K LS +G+A +LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA----HLHMEI 159
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMA 388
+ I HRDLK+ N+L+ + I+D G A + + N GT YMA
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 389 PEYA-----MGGIFSIK-SDVFSFGVLLLEI 413
PE M S K +D+++ G++ EI
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV---- 275
+ +G+G FG V++G G+ +AVK S R +E E+ L+H+N++
Sbjct: 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 64
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED- 334
+ +Y + SL +L T +V+ K LS +G+A +LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA----HLHMEI 120
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMA 388
+ I HRDLK+ N+L+ + I+D G A + + N GT YMA
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 389 PEYA-----MGGIFSIK-SDVFSFGVLLLEI 413
PE M S K +D+++ G++ EI
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 15/104 (14%)
Query: 320 IINGIARGILYLHEDSRLKIIHRDLKASNVL-LDDDMNP---KISDFGTARIFGGNQNQA 375
+++ I + + YLH ++HRDLK SN+L +D+ NP +I DFG A+ Q +A
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-----QLRA 177
Query: 376 NTNIIAG---TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
++ T ++APE + D++S G+LL +++G
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 31/214 (14%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
++G GG V++ + A+K L Q L ++NE+ + KLQ + +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRL 121
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
IY M ++D++ + + W+R+ S + + +H+ I+
Sbjct: 122 YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG---IV 177
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPEYAMGG 395
H DLK +N L+ D M K+ DFG A NQ Q +T + GT YM PE A+
Sbjct: 178 HSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGTVNYMPPE-AIKD 230
Query: 396 IFSIKS------------DVFSFGVLLLEIISGR 417
+ S + DV+S G +L + G+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV---- 275
+ +G+G FG V++G G+ +AVK S R +E E+ L+H+N++
Sbjct: 14 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 70
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED- 334
+ +Y + SL +L T +V+ K LS +G+A +LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA----HLHMEI 126
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMA 388
+ I HRDLK+ N+L+ + I+D G A + + N GT YMA
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 389 PEYA-----MGGIFSIK-SDVFSFGVLLLEI 413
PE M S K +D+++ G++ EI
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV---- 275
+ +G+G FG V++G G+ +AVK S R +E E+ L+H+N++
Sbjct: 11 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 67
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED- 334
+ +Y + SL +L T +V+ K LS +G+A +LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA----HLHMEI 123
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMA 388
+ I HRDLK+ N+L+ + I+D G A + + N GT YMA
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 389 PEYA-----MGGIFSIK-SDVFSFGVLLLEI 413
PE M S K +D+++ G++ EI
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 320 IINGIARGILYLHEDSRLKIIHRDLKASNVLL---DDDMNPKISDFGTARIFGGNQNQAN 376
I+ + + ++H+ + ++HRDLK N+L +D++ KI DFG AR+ +
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 377 TNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISGR 417
T T Y APE + D++S GV+L ++SG+
Sbjct: 168 TPCF--TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 221 ENKLGQGGFGPVYKGTLADGKAIAVKRLS-RTSGQGLKEFKNEVNLIAKLQHKNLV---- 275
+ +G+G FG V++G G+ +AVK S R +E E+ L+H+N++
Sbjct: 34 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 90
Query: 276 RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHED- 334
+ +Y + SL +L T +V+ K LS +G+A +LH +
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLA----HLHMEI 146
Query: 335 ----SRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANT--NIIAGTYGYMA 388
+ I HRDLK+ N+L+ + I+D G A + + N GT YMA
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 389 PEYA-----MGGIFSIK-SDVFSFGVLLLEI 413
PE M S K +D+++ G++ EI
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 15/105 (14%)
Query: 319 SIINGIARGILYLHEDSRLKIIHRDLKASNVL-LDDDMNP---KISDFGTARIFGGNQNQ 374
+++ I + + YLH ++HRDLK SN+L +D+ NP +I DFG A+ Q +
Sbjct: 120 AVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLR 171
Query: 375 ANTNIIAG---TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
A ++ T ++APE + D++S GVLL +++G
Sbjct: 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 25/124 (20%)
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLD-------------DDMNPKISDFGT 364
+S++ IA G+ +LH LKIIHRDLK N+L+ +++ ISDFG
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 365 ARIFGGNQN--QANTNIIAGTYGYMAPE-------YAMGGIFSIKSDVFSFGVLLLEIIS 415
+ Q + N N +GT G+ APE + D+FS G + I+S
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
Query: 416 GRKN 419
K+
Sbjct: 235 KGKH 238
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 146
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 147 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 200
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 251
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 252 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 286
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 319 SIINGIARGILYLHEDSRLKIIHRDLKASNVL-LDDDMNP---KISDFGTARIFGGNQNQ 374
+++ I + + YLH ++HRDLK SN+L +D+ NP +I DFG A+ Q +
Sbjct: 120 AVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-----QLR 171
Query: 375 ANTNIIAG---TYGYMAPEYAMGGIFSIKSDVFSFGVLLLEIISG 416
A ++ T ++APE + D++S GVLL ++G
Sbjct: 172 AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 147
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 148 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 201
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 252
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 253 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 287
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQ--HKNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHN 128
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 129 XG---VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 181
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 232
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 233 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 267
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 174
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 175 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 228
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 279
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 280 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 314
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 159
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 160 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 213
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSXECQ------- 264
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 265 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 299
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 160
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 161 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 214
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSXECQ------- 265
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 266 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 300
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 318 LSIINGIARGILYLHEDSRLKIIHRDLKASNVLLDDDM---NPKISDFGTARIFGGNQNQ 374
+ +I I G+ YLH+++ I+H DLK N+LL + KI DFG +R G +
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG---HA 187
Query: 375 ANTNIIAGTYGYMAPEYAMGGIFSIKSDVFSFGVL 409
I GT Y+APE + +D+++ G++
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 160
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 161 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 214
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSXECQ------- 265
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 266 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 300
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 146
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 147 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 200
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 251
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 252 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 286
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHN 180
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 181 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 233
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 284
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 285 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 319
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 24/207 (11%)
Query: 224 LGQGGFGPVYKG-TLADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQ----HK 272
LG+GGFG V+ G L D +A+K + R G + EV L+ K+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 273 NLVRXXXXXXXXXXXXXIYEYMPNKSLDVHLFD-ATRSVQLDWKRRLSIINGIARGILYL 331
++R + E P + D LFD T L + I +
Sbjct: 99 GVIRLLDWFETQEGFMLVLE-RPLPAQD--LFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMN-PKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
H ++HRD+K N+L+D K+ DFG+ + ++ T+ GT Y PE
Sbjct: 156 HSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTD-FDGTRVYSPPE 208
Query: 391 Y-AMGGIFSIKSDVFSFGVLLLEIISG 416
+ + ++ + V+S G+LL +++ G
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I +L + +L +HRD+K NVLLD + + +++DFG+ + + +++ GT
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 239
Query: 384 YGYMAPEYAMG-----GIFSIKSDVFSFGVLLLEIISGR 417
Y++PE G + + D +S GV + E++ G
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 147
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 148 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 201
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 252
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P DRPT + + +PQ T
Sbjct: 253 -----------------HLIRWCLALRPXDRPTFEEIQNHPWMQDVLLPQET 287
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 147
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 148 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 201
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 252
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 253 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 287
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 154
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 155 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 208
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSXECQ------- 259
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 260 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 294
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 324 IARGILYLHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGT 383
I +L + +L +HRD+K NVLLD + + +++DFG+ + + +++ GT
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC-LKMNDDGTVQSSVAVGT 255
Query: 384 YGYMAPEYAMG-----GIFSIKSDVFSFGVLLLEIISGR 417
Y++PE G + + D +S GV + E++ G
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 131
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 132 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 185
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 236
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 237 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 271
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 132
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 133 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 186
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 237
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 238 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 272
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHN 160
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 161 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 213
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 264
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 265 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 299
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 223 KLGQGGFGPVYKGTLADGKAIAVK--RLSRTSGQGLKEFKNEVNLIAKLQHKNLVRXXXX 280
++G GG V++ + A+K L Q L ++NE+ + KLQ + +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS-DKIIRL 121
Query: 281 XXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYLHEDSRLKII 340
IY M ++D++ + + W+R+ S + + +H+ I+
Sbjct: 122 YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK-SYWKNMLEAVHTIHQHG---IV 177
Query: 341 HRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNII-----AGTYGYMAPEYAMGG 395
H DLK +N L+ D M K+ DFG A NQ Q +T + G YM PE A+
Sbjct: 178 HSDLKPANFLIVDGM-LKLIDFGIA-----NQMQPDTTSVVKDSQVGAVNYMPPE-AIKD 230
Query: 396 IFSIKS------------DVFSFGVLLLEIISGR 417
+ S + DV+S G +L + G+
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 18/202 (8%)
Query: 218 FSDENKLGQGGFGPVYK-GTLADGKAIAVKRLSRTSGQGLKEFKNEVNLIAKL----QHK 272
F ++LG G +G V+K + DG+ AVKR S + +G K+ ++ + QH
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 273 NLVRXXXXXXXXXXXXXIYEYM-PNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILYL 331
VR E P+ + A+ W + +A +L
Sbjct: 118 CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA----HL 173
Query: 332 HEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPEY 391
H ++H D+K +N+ L K+ DFG G + G YMAPE
Sbjct: 174 HSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRYMAPEL 227
Query: 392 AMGGIFSIKSDVFSFGVLLLEI 413
+ G + +DVFS G+ +LE+
Sbjct: 228 -LQGSYGTAADVFSLGLTILEV 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 45/289 (15%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQ--HKNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 127
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 128 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 181
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEHGQTLLTYTWKLWCEGHAVELIDPV 451
+ +S V+S G+LL +++ G + F EH + ++ G V
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG--DIPF---EHDEEII---------GGQV-FFRQR 226
Query: 452 LKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
+ C H+ C+ P+DRPT + + +PQ T
Sbjct: 227 VSSECQ--------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 267
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 160
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 161 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 214
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSSECQ------- 265
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 266 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 300
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 160
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 161 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 214
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSSECQ------- 265
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 266 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 300
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 159
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 160 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 213
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSSECQ------- 264
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 265 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 299
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 132
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 133 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 186
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 237
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 238 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 272
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 166
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 167 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 220
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 271
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 272 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 306
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 159
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 160 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 213
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIGGQVFFRQRVSSECQ------- 264
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 265 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 299
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 23/217 (10%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQG-----------LKEFKNEVNLIAKLQHK 272
+ G +G V G ++G +A+KR+ T G K E+ L+ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 273 NLV--RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ R +Y D+ + + + + + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LHE ++HRDL N+LL D+ + I DF AR + N+ T+ + + Y APE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRW-YRAPE 203
Query: 391 YAMGGI-FSIKSDVFSFGVLLLEIISGR---KNNGFY 423
M F+ D++S G ++ E+ + + + + FY
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 174
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 175 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 228
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 279
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 280 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 314
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQH--KNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 132
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 133 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 186
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 237
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 238 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 272
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQ--HKNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCHN 128
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 129 ---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 181
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 232
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 233 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 267
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 113/292 (38%), Gaps = 51/292 (17%)
Query: 224 LGQGGFGPVYKGT-LADGKAIAVKRLSRTSGQGLKEFKN------EVNLIAKLQ--HKNL 274
LG GGFG VY G ++D +A+K + + E N EV L+ K+ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 275 VRXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATR-SVQLDWKRRLSIINGIARGILYLHE 333
+R I E P D+ F R ++Q + R S + + + H
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR--SFFWQVLEAVRHCH- 130
Query: 334 DSRLKIIHRDLKASNVLLDDDMNP-KISDFGTARIFGGNQNQANTNIIAGTYGYMAPEYA 392
++HRD+K N+L+D + K+ DFG+ + ++ T+ GT Y PE+
Sbjct: 131 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD-FDGTRVYSPPEWI 184
Query: 393 MGGIFSIKS-DVFSFGVLLLEIISGRKNNGFYFSEH---GQTLLTYTWKLWCEGHAVELI 448
+ +S V+S G+LL +++ G + F E GQ C+
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCG--DIPFEHDEEIIRGQVFFRQRVSSECQ------- 235
Query: 449 DPVLKQSCAPDELLKFIHIGLLCVQQDPADRPTMSSVVVMLASDSMTIPQPT 500
H+ C+ P+DRPT + + +PQ T
Sbjct: 236 -----------------HLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQET 270
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 23/217 (10%)
Query: 224 LGQGGFGPVYKGTLADGKAIAVKRLSRTSGQG-----------LKEFKNEVNLIAKLQHK 272
+ G +G V G ++G +A+KR+ T G K E+ L+ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 273 NLV--RXXXXXXXXXXXXXIYEYMPNKSLDVHLFDATRSVQLDWKRRLSIINGIARGILY 330
N++ R +Y D+ + + + + + I G+
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHV 149
Query: 331 LHEDSRLKIIHRDLKASNVLLDDDMNPKISDFGTARIFGGNQNQANTNIIAGTYGYMAPE 390
LHE ++HRDL N+LL D+ + I DF AR + N+ T+ + + Y APE
Sbjct: 150 LHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANK--THYVTHRW-YRAPE 203
Query: 391 YAMGGI-FSIKSDVFSFGVLLLEIISGR---KNNGFY 423
M F+ D++S G ++ E+ + + + + FY
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,671,398
Number of Sequences: 62578
Number of extensions: 657642
Number of successful extensions: 3573
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 1176
length of query: 536
length of database: 14,973,337
effective HSP length: 103
effective length of query: 433
effective length of database: 8,527,803
effective search space: 3692538699
effective search space used: 3692538699
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)