BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039172
(477 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2N8R7|GCP_ERYLH Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Erythrobacter litoralis (strain HTCC2594) GN=gcp PE=3
SV=1
Length = 344
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 218/374 (58%), Gaps = 46/374 (12%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
I+LGIE+SCD+TAAA+V + IL+Q ++SQ + A YGGV P++A AH+ + P+++
Sbjct: 3 IVLGIESSCDETAAALVATDRTILAQHIASQDEAHAPYGGVVPEIAARAHAERLAPMIEA 62
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
+ +A + DL A+A T GPGL + VG+ A+ IA P++ ++H+E HAL +R
Sbjct: 63 VMQEAGVDYADLDAIAATAGPGLIGGVMVGLVSAKAIAMAAGKPLIAINHLEGHALSSR- 121
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
L + ++ + L + GH ++L +GQY +L TTIDDA+GEAFDKTAK
Sbjct: 122 -LADSELEFPYALLLV--------SGGHCQILLVEGVGQYRRLATTIDDALGEAFDKTAK 172
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
LGL GGPAVEKLA +GDA++V PM + +FS+AGLK+ V A ES +
Sbjct: 173 ILGLGY--PGGPAVEKLARDGDAQAVPLPRPMLGSAEPHFSFAGLKSAVLRAKESGD--- 227
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAI---EWALKIEPSIKHLVVSGGV 370
A+IAASFQ+ AV + +R + A+ +W P+ LVV+GGV
Sbjct: 228 ------------HEDADIAASFQQAAVDCILDRLQVALGGDDW----PPA---LVVAGGV 268
Query: 371 ASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPED 430
A+N+ +RA L+ + S++ V PP +LCTDN M+ W G E + + DDP D
Sbjct: 269 AANQTIRAALEGFAADRSMRFVAPPLALCTDNAAMIGWAGCERLDLEQ-------DDPLD 321
Query: 431 FMYDLRPRWPLGEE 444
F RPRWPL E
Sbjct: 322 FRA--RPRWPLDPE 333
>sp|Q5FPS6|GCP_GLUOX Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Gluconobacter oxydans (strain 621H) GN=gcp PE=3 SV=2
Length = 365
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 202/369 (54%), Gaps = 28/369 (7%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+L IETSCDDTA A++ +G IL++ V SQ D A GGV P++A AH A+ +V E
Sbjct: 15 LLAIETSCDDTACAILAWDGTILAEGVLSQTDH-AILGGVVPEIAARAHLDALPALVAEV 73
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L KA+LT D+ A T GPGL L VG A+ +A + P V V+H+EAH L R
Sbjct: 74 LKKASLTLADIDTFAGTTGPGLIGGLIVGSSYAKGLAMALHRPFVAVNHIEAHILTPRLP 133
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
+ +L + + GH V G+Y +LG TIDDA GEAFDK AK
Sbjct: 134 SLGADLHFPYLTMLVS--------GGHCQCVSVEETGRYVRLGGTIDDAAGEAFDKVAKM 185
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGL GGPA+EKLA EG ++ P+K + C+FS++GLKT V S+ ID++
Sbjct: 186 LGLSW--PGGPALEKLATEGRDDAYPLPRPLKGREGCDFSFSGLKTAV-----SRLIDTQ 238
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
P S R+ A++AASFQR + +R E A L + P+ LVV+GGVA+NK
Sbjct: 239 DPTGSRDALPRQFAADVAASFQRAVADVMADRAEHA----LALSPNATALVVAGGVAANK 294
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+R L++ N+ + PP LCTDN VMVAW +E G + P +
Sbjct: 295 TLRHALEQVAANHGIPFFAPPLRLCTDNAVMVAWAALERLHAG--------ETPNEIDTA 346
Query: 435 LRPRWPLGE 443
RPRWPL E
Sbjct: 347 ARPRWPLSE 355
>sp|Q0P4K0|OSGP2_XENTR Probable tRNA threonylcarbamoyladenosine biosynthesis protein
osgepl1 OS=Xenopus tropicalis GN=osgepl1 PE=2 SV=2
Length = 405
Score = 241 bits (615), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/347 (41%), Positives = 200/347 (57%), Gaps = 23/347 (6%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
I+LGIETSCDDT AAVV NG IL + + Q D+ K GG+ P +A+ H I VV +
Sbjct: 29 IVLGIETSCDDTGAAVVDENGTILGEALHCQKDIHLKTGGIIPTVAQHLHRDNITKVVNK 88
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
A+H + ++ +LSA+A T+ PGL LCL VG+ + + +++ P + +HHMEAHAL R
Sbjct: 89 AIHASGISPYELSAIATTVKPGLGLCLGVGLSYSLDLVNKYHKPFIPIHHMEAHALTVR- 147
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
+ ++ FL L + GH +L + + ++ LG ++D+A G+ DK A+
Sbjct: 148 --LLHPVEFPFLVLL--------ISGGHCILAIVSGVSEFVMLGHSLDEAPGDTLDKVAR 197
Query: 254 WLGLDMR-----RSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
L L SGG A+E LAL G+ + K PM H+DCNFS+AGL+ QV IE
Sbjct: 198 RLSLINHPQCSGMSGGEAIEHLALHGNRKICKLKIPMSHHRDCNFSFAGLRNQVNKVIEQ 257
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALK---IEPSIKHLV 365
K + I + Q A+IAA+ Q LHL +R +RAI + + I LV
Sbjct: 258 KEAEKGI----SKGQLLPCVADIAAAVQHTVALHLAQRTQRAIYYCKREGLIPTERACLV 313
Query: 366 VSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIE 412
VSGGVASN+Y+R L + + L+CPPP LCTDNGVM+AW GIE
Sbjct: 314 VSGGVASNRYIRKALQTVTHESDMTLLCPPPRLCTDNGVMIAWNGIE 360
>sp|Q4V7F3|OSGP2_RAT Probable tRNA threonylcarbamoyladenosine biosynthesis protein
Osgepl1 OS=Rattus norvegicus GN=Osgepl1 PE=2 SV=1
Length = 414
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 209/387 (54%), Gaps = 29/387 (7%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
++LGIETSCDDTAAAVV G +L + + SQ ++ K GG+ P +A++ H I +V+E
Sbjct: 38 LVLGIETSCDDTAAAVVDETGNVLGEALHSQTEVHLKTGGIVPPVAQQLHRENIQRIVEE 97
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
AL + ++ DLSA+A TI PGL+L L VG+ + ++ QF P + +HHMEAHAL R
Sbjct: 98 ALSASGVSPSDLSAIATTIKPGLALSLGVGLSFSVQLVNQFKKPFIPIHHMEAHALTIR- 156
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
++ FL L + GH LL L ++ + LG ++D A G+ DK A+
Sbjct: 157 --LTHKVGFPFLVLL--------ISGGHCLLALVQSVSDFLLLGKSLDIAPGDMLDKVAR 206
Query: 254 WLGLDMR-----RSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
L L SGG A+E LA EG+ + PM+ K+C+FS+ GL+ I
Sbjct: 207 RLSLIKHPECSTMSGGKAIEHLAKEGNRFHFTINPPMQNAKNCDFSFTGLQHVTDKLITH 266
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALK---IEPSIKHLV 365
K + I Q S A+IAA+ Q HL +R RAI + + + P+ LV
Sbjct: 267 KEKEEGI----EKGQILSSAADIAAAVQHATACHLAKRTHRAILFCQQKNLLSPANAVLV 322
Query: 366 VSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPA 425
VSGGVASN Y+R L+ L+CPPP LCTDNG+M+AW GIE G
Sbjct: 323 VSGGVASNLYIRRALEIVANATQCTLLCPPPRLCTDNGIMIAWNGIERLRAGL----GIL 378
Query: 426 DDPEDFMYDLRPRWPLGEEFAEGRSEA 452
D ED Y+ P+ PLG + + +EA
Sbjct: 379 HDVEDIRYE--PKCPLGIDISREVAEA 403
>sp|Q32LQ3|OSGC2_DANRE Probable tRNA threonylcarbamoyladenosine biosynthesis protein
osgepl1 OS=Danio rerio GN=osgepl1 PE=2 SV=2
Length = 404
Score = 240 bits (613), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 209/387 (54%), Gaps = 29/387 (7%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
++LGIETSCD+T AAV+ G IL + + SQ + K GG+ P +A+ H I VVQE
Sbjct: 26 LVLGIETSCDETGAAVLDETGRILGESLHSQKETHLKTGGIIPLVAQRLHRENISRVVQE 85
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
AL+++ + +L+AVA T+ PGL+L L +G+ + K Q P + +HHMEAHAL R
Sbjct: 86 ALNRSAIEPSELTAVATTVKPGLALSLGIGLDYSLKFVRQHQKPFIPIHHMEAHALTVRM 145
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
+ + FL L + GH+LL LA + ++ LG T+D+A G+ DK A+
Sbjct: 146 ---LHPLDFPFLVLLV--------SGGHSLLALAKGIDEFLLLGQTLDEAAGDTLDKIAR 194
Query: 254 WLGLDMR-----RSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
L L SGG A+E+LA EGD + F +PM Q+ DCNFS+AGL+TQ+ AI
Sbjct: 195 RLSLRNHPECGTLSGGQAIERLAKEGDRLAFHFISPMGQNYDCNFSFAGLRTQITGAINK 254
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALK---IEPSIKHLV 365
K + + + Q +IAA+ Q HL +R RAI + + L+
Sbjct: 255 KEKEEGV----EAGQFLSCVKDIAAASQHTVASHLAKRTHRAILFCKSKGLLPEQNPTLI 310
Query: 366 VSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPA 425
VSGGVASN+Y+R L L L+CPP CTDNGVM+AW GIE G+
Sbjct: 311 VSGGVASNEYIRQILKIITDATGLHLLCPPSKFCTDNGVMIAWNGIERLKQGK----GIL 366
Query: 426 DDPEDFMYDLRPRWPLGEEFAEGRSEA 452
E+ Y+ P+ PLG + EA
Sbjct: 367 SYSEEVSYE--PKAPLGLDITSEVKEA 391
>sp|Q6PEB4|OSGP2_MOUSE Probable tRNA threonylcarbamoyladenosine biosynthesis protein
Osgepl1 OS=Mus musculus GN=Osgepl1 PE=1 SV=2
Length = 414
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 206/387 (53%), Gaps = 29/387 (7%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
++LGIETSCDDT AAVV G +L + + SQ + K GG+ P +A++ H I +V+E
Sbjct: 38 LVLGIETSCDDTGAAVVDETGNVLGEALHSQTQVHLKTGGIVPPVAQQLHRENIQRIVEE 97
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
L +T DLSA+A TI PGL+L L VG+ + ++ QF P + +HHMEAHAL R
Sbjct: 98 TLSACRITPSDLSAIATTIKPGLALSLGVGLSFSLQLVNQFKKPFIPIHHMEAHALTIR- 156
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
+++ FL L + GH LL L + + LG ++D A G+ DK A+
Sbjct: 157 --LTNKVEFPFLVLL--------ISGGHCLLALVQGVSDFLLLGKSLDIAPGDMLDKVAR 206
Query: 254 WLGLDMR-----RSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
L L SGG A+E+LA +G+ + PM+ K+C+FS+ GL+ I
Sbjct: 207 RLSLIKHPECSTMSGGKAIEQLAKDGNRFHFTINPPMQNAKNCDFSFTGLQHITDKLITH 266
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALK---IEPSIKHLV 365
K + I Q S A+IAA+ Q HL +R RAI + + + P+ LV
Sbjct: 267 KEKEEGI----EKGQILSSAADIAAAVQHATACHLAKRTHRAILFCKQKNLLSPANAVLV 322
Query: 366 VSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPA 425
VSGGVASN Y+R L+ L+CPPP LCTDNG+M+AW GIE G
Sbjct: 323 VSGGVASNLYIRKALEIVANATQCTLLCPPPRLCTDNGIMIAWNGIERLRAGL----GVL 378
Query: 426 DDPEDFMYDLRPRWPLGEEFAEGRSEA 452
D ED Y+ P+ PLG + + +EA
Sbjct: 379 HDVEDIRYE--PKCPLGVDISREVAEA 403
>sp|Q2VYV2|GCP_MAGSA Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=gcp PE=3 SV=1
Length = 347
Score = 239 bits (610), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 199/369 (53%), Gaps = 32/369 (8%)
Query: 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQ 132
+++LGIE+SCD+TAAAVV EIL +VV SQ D +GGV P++A +H +D +V
Sbjct: 1 MLVLGIESSCDETAAAVVNDRREILGEVVLSQLDEHRPFGGVVPEIAARSHLAHMDKLVA 60
Query: 133 EALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVAR 192
EA+ +A + DL AVA T GPGL + VGV + IA P + V+H+E HAL R
Sbjct: 61 EAMRRAGVGFADLDAVAATGGPGLIGGVIVGVMTGKAIALAAGKPFLAVNHLEGHALTPR 120
Query: 193 QWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTA 252
LT + +L L + GH L+ +G+YT+LGTTIDDA GEAFDK A
Sbjct: 121 --LTHD-IAFPYLLLLA--------SGGHCQLLAVEGVGRYTRLGTTIDDAAGEAFDKVA 169
Query: 253 KWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNID 312
K GL GGPAVE A GD PMK C+FS++GLK RL IES
Sbjct: 170 KMAGLGY--PGGPAVEAAAQGGDPARFTLPRPMKGKPGCDFSFSGLKNAARLLIESLP-- 225
Query: 313 SRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVAS 372
P+S+ +A++A +FQ + +R R + P +HLVV+GGVA+
Sbjct: 226 --QPLSAA------DQADVARAFQDAVADAMADRVRRGVREMKSRWPQTQHLVVAGGVAA 277
Query: 373 NKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFM 432
N +R L R L+ + PP LCTDN M+AW G+E +G+ D D
Sbjct: 278 NTALRQVLVRIGNETGLEFLAPPLKLCTDNAAMIAWAGLERLRLGQSD---------DLT 328
Query: 433 YDLRPRWPL 441
+ RPRWPL
Sbjct: 329 FAPRPRWPL 337
>sp|Q92LH8|GCP_RHIME Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rhizobium meliloti (strain 1021) GN=gcp PE=3 SV=1
Length = 360
Score = 238 bits (608), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/376 (40%), Positives = 203/376 (53%), Gaps = 38/376 (10%)
Query: 75 ILGIETSCDDTAAAVV----RGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
ILGIETSCD+TAA+VV G G IL VV SQ + + YGGV P++A AH A+D +
Sbjct: 3 ILGIETSCDETAASVVLRDEEGRGRILGDVVLSQLEEHSAYGGVVPEIAARAHVEALDAL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
++EAL +A +T RD+ AVA T GPGL L VG+ + IA P+ V+H+E HAL
Sbjct: 63 IEEALLRAGVTLRDIDAVAATSGPGLIGGLIVGLMTGKAIARATGKPLYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D + ++ + GH L+L +G+Y + GTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLSFPYLMLLVSGGHTQLILVKGVGEYERWGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE+ A G+AE F P+ +FS++GLKT VR A +S
Sbjct: 172 TAKLLGLPY--PGGPAVERAAQAGNAERFDFPRPLVGDARLDFSFSGLKTAVRQAAQSLG 229
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH--LVVSG 368
P++ A++ ASFQR L +R R ++ S+ LVV+G
Sbjct: 230 -----PVTDQDI------ADVCASFQRAISRTLRDRVGRGLKRFRADFASVDQPALVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+N+ +R L + + + PP LCTDN M+AW G E G PAD
Sbjct: 279 GVAANQTLRRTLQSLCDEHGFRFIAPPLQLCTDNAAMIAWAGAERLAAGL-----PADGL 333
Query: 429 EDFMYDLRPRWPLGEE 444
+ R RWPL E
Sbjct: 334 D---AAPRSRWPLDSE 346
>sp|Q6FYF1|GCP_BARQU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Bartonella quintana (strain Toulouse) GN=gcp PE=3
SV=1
Length = 364
Score = 238 bits (607), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 154/387 (39%), Positives = 207/387 (53%), Gaps = 52/387 (13%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAAV+ GN +ILS +V SQ D A YGGV P++A AH +D +
Sbjct: 3 LLGIETSCDETAAAVIEHNIEGNSQILSNIVWSQTDNHAPYGGVVPEIAARAHVEILDDL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
+ +AL A+ +D+ A+AVT GPGL L VGV A+ ++ P + V+H+E HAL
Sbjct: 63 ILKALTDAHTKLKDIDAIAVTSGPGLIGGLLVGVMSAKALSLATGKPFIAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
A LT L L + GH +L H +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 A--VLTHNVAFPYLLLLV---------SGGHTQTILVHEVGNYQRLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPA+EK AL GD + P+K K +FS++GLKT VR A + +
Sbjct: 172 TAKLLGLPY--PGGPALEKAALLGDKNRISLPRPLKGEKRLDFSFSGLKTAVRQAATAMS 229
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH------- 363
P++ D IAASFQ + +R A+++ P + H
Sbjct: 230 -----PLTENDVAD------IAASFQAAVTDTVYDRVHLALQYFTHQYP-LSHYKGRRPP 277
Query: 364 -LVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGR---F 419
LVV+GGVA+N+ +R L + + + PP SLCTDN M+A+ G + F G F
Sbjct: 278 ALVVAGGVAANQAIRLTLQELAHQHGFEFIAPPLSLCTDNAAMIAFAGAQKFARGEKNSF 337
Query: 420 DPPPPADDPEDFMYDLRPRWPLGEEFA 446
D P R RWPL E+ A
Sbjct: 338 DIAP------------RSRWPLDEKAA 352
>sp|A5VSL6|GCP_BRUO2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=gcp PE=3 SV=1
Length = 359
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 204/390 (52%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH+ A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHAEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPAVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|B0CIE0|GCP_BRUSI Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gcp
PE=3 SV=1
Length = 359
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 203/390 (52%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS +V SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNLVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++AL+GD + P+K NFS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPAVERMALQGDQKRFALPRPLKGEARLNFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|A9M8M3|GCP_BRUC2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=gcp PE=3 SV=1
Length = 359
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 204/390 (52%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V+ G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVQRDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPAVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|B3PQA4|GCP_RHIE6 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rhizobium etli (strain CIAT 652) GN=gcp PE=3 SV=1
Length = 365
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 210/374 (56%), Gaps = 39/374 (10%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
ILGIETSCD+TAAAVV G+ ILS VV SQ D + YGGV P++A AH A+D +
Sbjct: 7 ILGIETSCDETAAAVVERDAEGHSRILSDVVLSQLDEHSAYGGVVPEIAARAHVEALDEL 66
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
++EAL +AN++ D+ A+A T GPGL L VG+ + IA P+ V+H+E HAL
Sbjct: 67 IEEALMRANVSLADVDAIAATSGPGLIGGLLVGLMTGKAIAKAAGKPLYAVNHLEGHALT 126
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D + ++ + GH L+L +G Y + GTTIDDA+GEAFDK
Sbjct: 127 AR-----------LTDGLSFPYLMLLVSGGHTQLILVRGVGDYERWGTTIDDALGEAFDK 175
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++A +G+A F P+ +FS++GLKT VRLA +
Sbjct: 176 TAKLLGLPY--PGGPAVERMARDGNAGRFDFPRPLVGEARLDFSFSGLKTAVRLAAQE-- 231
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH---LVVS 367
I+ S QD A+I ASFQR L++R R ++ + PSI LVV+
Sbjct: 232 ------IAPLSDQD---VADICASFQRAISRTLKDRIGRGLQRFKREFPSIGETPALVVA 282
Query: 368 GGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADD 427
GGVA+N +RA L N + + PP SLCTDN VM+AW G+E +G
Sbjct: 283 GGVAANLELRATLQGLCDKNGFRFIAPPLSLCTDNAVMIAWAGLERMAIGV--------A 334
Query: 428 PEDFMYDLRPRWPL 441
P+ R RWPL
Sbjct: 335 PDALDVQPRSRWPL 348
>sp|Q8FYI5|GCP_BRUSU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella suis biovar 1 (strain 1330) GN=gcp PE=3 SV=1
Length = 359
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 203/390 (52%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPAVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|Q8YJB1|GCP_BRUME Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=gcp PE=3 SV=1
Length = 359
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 203/390 (52%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPAVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|C0RFD2|GCP_BRUMB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=gcp PE=3 SV=1
Length = 359
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/390 (39%), Positives = 203/390 (52%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPAVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|A6UDR4|GCP_SINMW Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Sinorhizobium medicae (strain WSM419) GN=gcp PE=3
SV=1
Length = 360
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 203/378 (53%), Gaps = 42/378 (11%)
Query: 75 ILGIETSCDDTAAAVV----RGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
ILGIETSCD+TAA+VV G G IL VV SQ + + YGGV P++A AH A+D +
Sbjct: 3 ILGIETSCDETAASVVMRDEEGRGRILGDVVLSQLEEHSAYGGVVPEIAARAHVEALDTL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
+ EAL +A + D+ A+A T GPGL L VG+ + IA P+ V+H+E HAL
Sbjct: 63 IVEALLRAGVKLEDIDAIAATSGPGLIGGLIVGLMTGKAIARATGKPLYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR +Q +L L + GH L+L +G+Y + GTTIDDA+GEAFDK
Sbjct: 123 AR---LTDELQFPYLMLLV--------SGGHTQLILVKGVGEYERWGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE+ A G+ E F P+ +FS++GLKT VR A +S
Sbjct: 172 TAKLLGLPY--PGGPAVERAARTGNPERFDFPRPLVGDARLDFSFSGLKTAVRQAAKSLE 229
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH--LVVSG 368
P++ A+I ASFQR L +R R+++ S+ LVV+G
Sbjct: 230 -----PVTEADI------ADICASFQRAISRTLRDRVGRSLKRFKAESASVAQPALVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+N+ +R L + + V PP SLCTDN M+AW G E G PAD
Sbjct: 279 GVAANQALRQTLQSLCDEHGFRFVAPPLSLCTDNAAMIAWAGAERLAAGL-----PADG- 332
Query: 429 EDFMYDLRP--RWPLGEE 444
D+ P RWPL E
Sbjct: 333 ----LDVAPRSRWPLDAE 346
>sp|Q6G1R3|GCP_BARHE Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Bartonella henselae (strain ATCC 49882 / Houston 1)
GN=gcp PE=3 SV=1
Length = 364
Score = 235 bits (600), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 207/388 (53%), Gaps = 54/388 (13%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TA AV+ GN +ILS +V SQ D A YGGV P++A AH +D +
Sbjct: 3 LLGIETSCDETATAVIEHTIGGNSQILSNIVWSQTDHHAPYGGVVPEIAARAHVEILDEL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
+ +AL A+ +D+ A+AVT GPGL L VGV A+ ++ P +GV+H+E HAL
Sbjct: 63 ILKALRDAHTKLKDIDAIAVTNGPGLIGGLLVGVMSAKALSLATGKPFIGVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQ---KDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEA 247
A L +N+H + GH +L H +G Y +LGTTIDDA+GEA
Sbjct: 123 AV--------------LTHNVHFPYLLLLVSGGHTQTILVHGVGNYQRLGTTIDDALGEA 168
Query: 248 FDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIE 307
FDKTAK LGL GGPA+EK AL G+ + P+K K +FS++GLKT VR A
Sbjct: 169 FDKTAKLLGLPY--PGGPAIEKAALLGNKNRIPLPRPLKGEKRLDFSFSGLKTAVRQAAT 226
Query: 308 SKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH---- 363
+ + P++ + D IAASFQ + +R A++ + P +H
Sbjct: 227 AIS-----PLTESDVAD------IAASFQAAVTDTVYDRVYLALQHFTQQYPLSRHQGPR 275
Query: 364 ---LVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFD 420
LVV+GGVA+N+ +R L + + PP SLCTDN M+A+ G + G
Sbjct: 276 PPALVVAGGVAANQAIRLTLQELADQQGFEFIAPPLSLCTDNAAMIAFAGAQRLARG--- 332
Query: 421 PPPPADDPEDFMYDLRP--RWPLGEEFA 446
E D+ P RWPL E+ A
Sbjct: 333 --------EKSSLDIAPRSRWPLDEKSA 352
>sp|Q2GK88|GCP_ANAPZ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Anaplasma phagocytophilum (strain HZ) GN=gcp PE=3
SV=1
Length = 342
Score = 235 bits (600), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 201/341 (58%), Gaps = 25/341 (7%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
++LGIETSCD+TA A++ +GE+ + V SQ + A YGGV P++A AH + +V++
Sbjct: 4 VLLGIETSCDETAVAILTDSGEVFAHEVLSQVEHSA-YGGVVPEIAARAHYDFLQVLVKK 62
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
A+ + L DLS++AVT GPGL L VGV A+ ++ PI+ V+H+EAHALVAR
Sbjct: 63 AMSNSGLKFDDLSSIAVTAGPGLVGSLIVGVMFAKAVSYATKKPIIAVNHLEAHALVAR- 121
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
M + + F + + + GH +LAH++G Y++LG IDD++GEAFDK A+
Sbjct: 122 ------MNQEIVFPFLVLIV----SGGHCQFMLAHDVGCYSKLGGAIDDSLGEAFDKVAR 171
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
LGL GGPAVE A G + F + C+FS++GLKT VR AIE +
Sbjct: 172 MLGLGY--PGGPAVECKAKNGRGDRFFFPRALHNRPGCDFSFSGLKTAVRYAIEREG--- 226
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASN 373
P+ D + +I ASFQ L R AI+ A +++ I LVV+GGVASN
Sbjct: 227 --PL------DEEMVCDICASFQECVGDILVSRIRNAIKAARQLKEGIDKLVVTGGVASN 278
Query: 374 KYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHF 414
++R + + ++ + V PP LCTDNG+MVAW G+E+F
Sbjct: 279 GFLRTIISQCAEDMGVTAVFPPRELCTDNGIMVAWAGVENF 319
>sp|Q57B07|GCP_BRUAB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella abortus biovar 1 (strain 9-941) GN=gcp PE=3
SV=1
Length = 359
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 202/390 (51%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGP VE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPTVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|Q2YLM4|GCP_BRUA2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella abortus (strain 2308) GN=gcp PE=3 SV=1
Length = 359
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 202/390 (51%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGP VE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPTVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|B2S843|GCP_BRUA1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella abortus (strain S19) GN=gcp PE=3 SV=1
Length = 359
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 202/390 (51%), Gaps = 43/390 (11%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAA+V G G ILS VV SQ YGGV P++A AH A+D +
Sbjct: 3 VLGIETSCDETAAAIVERDDMGEGRILSNVVLSQIAEHEPYGGVVPEIAARAHVEALDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL+ A L ++ AVA T GPGL L VG+ A+ +A P V+H+E HAL
Sbjct: 63 VDRALNDAGLKLYEVDAVAATAGPGLIGGLIVGLMTAKALAMAAQKPFYAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH +VL +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 AR-----------LTDGLPFPYLLLLVSGGHTQMVLVRGIGDYERLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGP VE++AL+GD + P+K +FS++GLKT VR +
Sbjct: 172 TAKLLGLPY--PGGPTVERMALQGDQKRFALPRPLKGEARLDFSFSGLKTAVR-----QT 224
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP--SIKHLVVSG 368
+P++ D I ASFQ L +R R++E P + LVV+G
Sbjct: 225 ATELVPLTDQDVTD------ICASFQAAVADTLSDRVGRSLERFKTEFPDCATPSLVVAG 278
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +RA L+ + + PP +LCTDN M+AW G E P
Sbjct: 279 GVAANKTLRAALENLCTRHGFAFIAPPLNLCTDNAAMIAWAGAERAAT---------QAP 329
Query: 429 EDFMYDLRPRWPLGEE----FAEGRSEARS 454
+ R RWPL E+ F GR A++
Sbjct: 330 DSLDIAPRSRWPLDEKSAPVFGTGRRGAKA 359
>sp|Q2VNJ2|GCP_METAI Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Methylocapsa acidiphila GN=gcp PE=3 SV=1
Length = 352
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 193/371 (52%), Gaps = 37/371 (9%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIET+CD+TAAAVVR G GEILS V SQ A YGGV P++A AH ID +
Sbjct: 3 VLGIETTCDETAAAVVRLEPGGAGEILSNEVMSQIAEHAAYGGVVPEIAARAHIDIIDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL A DL +A GPGL + VG+ A+ +A P + V+H+EAHAL
Sbjct: 63 VLRALAHAGTRLADLDGIAAAAGPGLIGGVIVGLTTAKALALASRKPFIAVNHLEAHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR D ++ + GH LV +G Y +LG+T+DDA+GEAFDK
Sbjct: 123 AR-----------LTDALEFPYLLLLVSGGHTQLVAVRGVGDYLRLGSTVDDAVGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
AK LGL GGP VEK A EG+A F PM +FS +GLKT VRL +E N
Sbjct: 172 IAKMLGLPY--PGGPEVEKRAAEGNAARFDFPRPMLGRPKPDFSLSGLKTAVRLEMERLN 229
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGV 370
+S T D + ASFQ V + +R + + +VV+GGV
Sbjct: 230 -----SLSPTDVAD------LCASFQAAVVDMIIDRSRVGLRLFRETVGPSNAMVVAGGV 278
Query: 371 ASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPED 430
A+N +R L R + ++LV PPP LCTDNG M+AW G+E +G D D
Sbjct: 279 AANGAIRRALMRFCGESGMRLVLPPPQLCTDNGAMIAWAGLERLSLGLID---------D 329
Query: 431 FMYDLRPRWPL 441
+ R RWPL
Sbjct: 330 LTFAARARWPL 340
>sp|B8EJI6|GCP_METSB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Methylocella silvestris (strain BL2 / DSM 15510 /
NCIMB 13906) GN=gcp PE=3 SV=1
Length = 352
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 199/371 (53%), Gaps = 37/371 (9%)
Query: 75 ILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIET+CD+TAAAVV+ G GEILS V SQ A YGGV P++A AH +D +
Sbjct: 3 VLGIETTCDETAAAVVQLNPGGAGEILSNEVMSQIAEHAAYGGVVPEIAARAHIEVLDRL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
V AL A + +L +A GPGL + VG+ A+ +A + P + V+H+EAHAL
Sbjct: 63 VARALEDAKIKLAELDGIAAAAGPGLVGGVIVGLTTAKALALASHKPFIAVNHLEAHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR + DF L + + GH LV +G Y +LG+T+DDA+GEAFDK
Sbjct: 123 ARLTDGV-----DFPYLLLLV------SGGHTQLVAVKGVGDYLRLGSTVDDAVGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
AK LGL GGP VE++A +GD F PM+ +FS +GLKT VR+A +
Sbjct: 172 VAKMLGLAY--PGGPEVERMAAKGDPTRFDFPRPMQGRAKPDFSLSGLKTAVRVAAQR-- 227
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGV 370
I S S D A++ ASFQ V + +R + + +VV+GGV
Sbjct: 228 ------IHSPSQTD---VADLCASFQAAIVDTMIDRSRAGLRLFRERVGDCNAMVVAGGV 278
Query: 371 ASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPED 430
+N +R L R + L+L+ PPP LCTDNG M+AW GIE +G D D
Sbjct: 279 GANGAIRRALSRFCAESGLRLILPPPQLCTDNGAMIAWAGIERLSLGLVD---------D 329
Query: 431 FMYDLRPRWPL 441
+ RPRWPL
Sbjct: 330 MTFAARPRWPL 340
>sp|Q4FNV6|GCP_PELUB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Pelagibacter ubique (strain HTCC1062) GN=gcp PE=3
SV=1
Length = 357
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 202/373 (54%), Gaps = 40/373 (10%)
Query: 74 IILGIETSCDDTAAAVVRGNGE----ILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDP 129
IILGIE+SCD+TAA+++ N + ILS +VSSQ D+ ++GGV P++A +H ID
Sbjct: 6 IILGIESSCDETAASIITENEQGMPTILSSIVSSQVDVHKEFGGVVPELAARSHMEKIDL 65
Query: 130 VVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHAL 189
+ ++A K+ + DL A+A T GPGL +CL VG+ + +A N P + V+H+E HAL
Sbjct: 66 ITKKAFDKSGVKMEDLDAIAATAGPGLMVCLSVGLSFGKAMASSLNKPFIAVNHLEGHAL 125
Query: 190 VARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFD 249
+ + + +L L + GH + LG Y +LGTTIDDA+GEAFD
Sbjct: 126 SPK---LNSELNYPYLLLL--------ISGGHTQFLSVQGLGNYKRLGTTIDDAVGEAFD 174
Query: 250 KTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESK 309
KTAK LG++ GGP +E A +GD + P+ CN S+AGLKT V L I
Sbjct: 175 KTAKLLGIEF--PGGPQIEVYAKKGDPNKYELPKPIFHKGGCNLSFAGLKTAV-LKI--- 228
Query: 310 NIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH-LVVSG 368
S + + + ++AASFQ+ L ++ + A E K+ K+ VV+G
Sbjct: 229 ---------SKQIKTEQEKYDLAASFQKTIEEILYKKSKIAFEEFKKMNTINKNKFVVAG 279
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+NK +R L K + + PP +LC DN M+A G+E F + +F D P
Sbjct: 280 GVAANKRIREVLTNLCKEEEFEAIFPPINLCGDNAAMIAMVGLEKFKLKQFS---ELDSP 336
Query: 429 EDFMYDLRPRWPL 441
+PRWPL
Sbjct: 337 A------KPRWPL 343
>sp|Q3YS67|GCP_EHRCJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Ehrlichia canis (strain Jake) GN=gcp PE=3 SV=1
Length = 350
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 203/371 (54%), Gaps = 40/371 (10%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
++LGIETSCD+TA A+V N E+LS + SQ + A+YGGV P++A AH + +
Sbjct: 7 VVLGIETSCDETAVAIVNSNKEVLSHKILSQKEH-AEYGGVVPEIASRAHINYLYDLTVS 65
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
+ ++ L+ ++ AVAVT GPGL L VGV A+ IA PI+ ++H+EAHAL+ R
Sbjct: 66 CIEESQLSLNNIDAVAVTSGPGLIGGLIVGVMIAKGIASVTGKPIIEINHLEAHALIVRM 125
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
+ + FL L + GH ++ +N+G Y +LG+++DD++GE FDK AK
Sbjct: 126 FY---EINFPFLLLI--------ISGGHCQFLIVYNVGCYHKLGSSLDDSLGEVFDKVAK 174
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
L L GGP +EK +L GD++S + C+FS++GLKT VR NI
Sbjct: 175 MLNLGY--PGGPVIEKKSLSGDSKSFVLPRALTGRCGCDFSFSGLKTAVR------NI-- 224
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASN 373
I + D K +I+ASFQ L R AI + I+ I LVV+GGVA+N
Sbjct: 225 ---IMNHEYIDNKLICDISASFQECVGDILVNRINNAIAMSKAIDKRIDKLVVTGGVAAN 281
Query: 374 KYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFC---VGRFDPPPPADDPED 430
K +R R+ R +N+ ++ PP LCTDNG+M+ W GIE+ V D P A
Sbjct: 282 KLLRERMLRCASDNNFEIFYPPSKLCTDNGIMIGWAGIENLVKDYVSNLDFAPKA----- 336
Query: 431 FMYDLRPRWPL 441
RWPL
Sbjct: 337 -------RWPL 340
>sp|Q5PAV6|GCP_ANAMM Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Anaplasma marginale (strain St. Maries) GN=gcp PE=3
SV=1
Length = 341
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 203/367 (55%), Gaps = 34/367 (9%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
ILGIETSCD+TA AV+ +LS V SQ + + +GGV P++A AHS + +V +A
Sbjct: 7 ILGIETSCDETAVAVLNQR-SVLSHEVLSQKEH-SSFGGVVPEIAARAHSDFLHVLVSKA 64
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
+ A++ DLSA+AVT GPGL L VGV A+ IA + PI+ V+H+EAHALVAR
Sbjct: 65 MGGAHIGFSDLSAIAVTSGPGLVGSLIVGVMLAKAIAYVAHKPIIAVNHLEAHALVAR-- 122
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
+ ++ FL L + GH ++AH++G+YT+LG ++DD++GE+FDK A+
Sbjct: 123 MIYADLEFPFLVLI--------ISGGHCQFLIAHDVGRYTKLGESVDDSLGESFDKVARM 174
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGL GGP VE AL+GDA F +K CNFS++GLKT VR I +
Sbjct: 175 LGLGY--PGGPEVESCALKGDAHRFPFPRALKSRPGCNFSFSGLKTAVRYTIAKEGK--- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
D ++ +I ASFQ+ L R A+ A + SI +VVSGGVA+N
Sbjct: 230 --------LDNQALYDICASFQQCVGEILVSRIANAMAAAKSADSSISKMVVSGGVAANN 281
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
++R + + + PP LCTDNG+MV W G+E+ G F
Sbjct: 282 FLRGSIRKCANELGFDAIFPPQELCTDNGIMVGWAGLENLRKGNF---------SSLELI 332
Query: 435 LRPRWPL 441
R RWPL
Sbjct: 333 PRARWPL 339
>sp|Q7VQQ9|GCP_BLOFL Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Blochmannia floridanus GN=gcp PE=3 SV=1
Length = 353
Score = 233 bits (593), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 204/371 (54%), Gaps = 31/371 (8%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T AV +L V SQ L ++YGGV P++A H + P++ +
Sbjct: 3 VLGIETSCDETGIAVYDEYRGLLVHKVYSQGVLHSRYGGVVPELAARDHIRKVIPLIVGS 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV---- 190
L +A L D+ AVA T GPGL L VG A +A +N+P++GVHHMEAH L
Sbjct: 63 LKQARLISSDIDAVAYTAGPGLIGALLVGASVACSLAYAWNVPVIGVHHMEAHLLTPMLN 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
+ ++ + +DF+D+ + I + GH LV+ N+G+Y LG ++DDA+GE FDK
Sbjct: 123 KKLIISNSTSFSDFIDVIDFPFIALLVSGGHTQLVMVKNIGEYKILGESVDDAVGEVFDK 182
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
A +LGL GG + ++A G F PM NFS++GLKT V AI S
Sbjct: 183 IAVFLGLG--YPGGALLSEMAQVGIKGRYIFPKPMINKPGFNFSFSGLKTAVIRAIMS-- 238
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGV 370
S D+++RA+IA F+R V L +C +A++ + +K+LV+SGGV
Sbjct: 239 ----------SSNDQQTRADIACGFERAVVETLSVKCYKALK-----QMKVKYLVISGGV 283
Query: 371 ASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPED 430
++N +R++L + + + S +L+CP CTDNG MVA+TG+ G + D
Sbjct: 284 SANTMLRSKLLKMMYSISGKLLCPELEFCTDNGAMVAYTGLIRLKAGLSN--------RD 335
Query: 431 FMYDLRPRWPL 441
++PRW L
Sbjct: 336 LSITVKPRWSL 346
>sp|Q1GCQ5|GCP_RUEST Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Ruegeria sp. (strain TM1040) GN=gcp PE=3 SV=1
Length = 365
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 203/373 (54%), Gaps = 33/373 (8%)
Query: 73 LIILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAID 128
L +LG+E+SCDDTAAAVVR EILS +V Q +L + YGGV P++A AH+ +D
Sbjct: 5 LTLLGLESSCDDTAAAVVRQTTGAKAEILSSIVFGQTELHSAYGGVVPEIAARAHAEKLD 64
Query: 129 PVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHA 188
V++AL +A LT DL A+AVT GPGL + GV A+ I+ LP++GV+H+ HA
Sbjct: 65 SCVRDALAEAGLTLGDLDAIAVTAGPGLIGGVMSGVMCAKGISAATGLPLIGVNHLAGHA 124
Query: 189 LVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAF 248
L R+ +D + + + + GH ++A +++LG TIDDA GEAF
Sbjct: 125 LT-------PRLTDDITYPYLMLLV----SGGHCQYLIARGPETFSRLGGTIDDAPGEAF 173
Query: 249 DKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
DKTA+ LGL + GGP+V+ A GD E +F P+ DCN S++GLKT +
Sbjct: 174 DKTARLLGLP--QPGGPSVQAEAEHGDPERFRFPRPLLDRPDCNLSFSGLKTAL------ 225
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSG 368
+ +I I+ R+ RA++ A FQ V L E+ RA+ L+ +P L V+G
Sbjct: 226 MRMRDQI-IAEKGGLTRQDRADLCAGFQAAIVDTLVEKTRRALRLYLEDKPQHPTLAVAG 284
Query: 369 GVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDP 428
GVA+N +R L + PP +LCTDN M+A+ G+E + G D
Sbjct: 285 GVAANTEIRNGLMALCFELETDFLAPPLALCTDNAAMIAYAGLERYKTGARD-------- 336
Query: 429 EDFMYDLRPRWPL 441
RPRWPL
Sbjct: 337 -GMSLSARPRWPL 348
>sp|Q5NL82|GCP_ZYMMO Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 /
ZM4 / CP4) GN=gcp PE=3 SV=1
Length = 363
Score = 231 bits (590), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 206/368 (55%), Gaps = 36/368 (9%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
++LG+E+SCD+TA A+V +G I+S +++Q L YGGV P++A AH ++P+V++
Sbjct: 18 LVLGLESSCDETAVALVDNDGNIISSHLATQEILHRPYGGVVPEIAARAHVERLEPLVRK 77
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
L+++ ++ A+A T GPGL + VG + ++ P++ ++H+E HAL R
Sbjct: 78 VLNESGKNLSEIDAIAATAGPGLIGGVMVGFVTGKALSLACKKPLIAINHLEGHALTPR- 136
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
L + +L L + GH ++L N+G+Y +L TTIDDA GEAFDKTAK
Sbjct: 137 -LADKTLSFPYLLLL--------ISGGHCQILLVKNVGEYRRLATTIDDAGGEAFDKTAK 187
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
LGL GGPAVE+ AL GD +V P+ + K+ +FS+AGLKT V A +S
Sbjct: 188 ILGLGF--PGGPAVEREALNGDPMAVPLPRPLIKSKEPHFSFAGLKTAVLRAYQS----- 240
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASN 373
R +IAASFQ+ + L R E+A++ I V++GG+A+N
Sbjct: 241 ----------GIYKRHDIAASFQQAVIDCLVNRSEKALKKIEGENIQINAFVIAGGMAAN 290
Query: 374 KYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMY 433
+ +R L + ++L L+ PPPSLCTDNG M+AW G+E F +G D +
Sbjct: 291 QAIRPALTDLAEAHNLPLIAPPPSLCTDNGAMIAWAGVERFRLGMID---------NLES 341
Query: 434 DLRPRWPL 441
R RWPL
Sbjct: 342 PARARWPL 349
>sp|A1UQZ7|GCP_BARBK Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Bartonella bacilliformis (strain ATCC 35685 / KC583)
GN=gcp PE=3 SV=1
Length = 364
Score = 231 bits (589), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 208/382 (54%), Gaps = 48/382 (12%)
Query: 75 ILGIETSCDDTAAAVV----RGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TA AV+ +G ILS +V SQ + A YGGV P++A AH +D +
Sbjct: 3 LLGIETSCDETATAVIEHNLKGKSHILSNIVWSQIEDHAPYGGVVPEIAARAHVEILDTL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
+ EAL KA T +++ A+AVT GPGL L VG+ A+ +A P + V+H+E HAL
Sbjct: 63 ILEALAKAKTTLKEIDAIAVTGGPGLIGGLLVGLMSAKALAFATGKPFIAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
A + Q F L + + GH ++L H +G Y +LGTT DDA+GEAFDK
Sbjct: 123 A-----VLTHQVTFPYLLLLV------SGGHTQMILVHGVGNYQRLGTTFDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPA+EK AL GD + P+K +K NFS++GLKT VR A
Sbjct: 172 TAKLLGLPY--PGGPALEKAALLGDKNRIPLPRPLKGNKQLNFSFSGLKTAVRQAAT--- 226
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH------- 363
+ P+S D IAASFQ + L++R A+++ PS +
Sbjct: 227 --AMAPLSEQDVSD------IAASFQAAVIDTLQDRVHLALQYFTSQYPSSHNQEHRPPA 278
Query: 364 LVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPP 423
VV+GGVA+N+ +R L +S + + PPPSLCTDN M+A+ G E G+ P
Sbjct: 279 FVVAGGVAANQAIRLTLQNLAHQHSFEFIAPPPSLCTDNAAMIAFAGAERIARGQTSP-- 336
Query: 424 PADDPEDFMYDLRP--RWPLGE 443
D+ P RWPL E
Sbjct: 337 ---------LDIAPRSRWPLDE 349
>sp|Q2K3D7|GCP_RHIEC Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gcp
PE=3 SV=2
Length = 365
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 211/374 (56%), Gaps = 39/374 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGE----ILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
ILGIETSCD+TAAAVV N E +LS VV SQ D + YGGV P++A AH A+D +
Sbjct: 7 ILGIETSCDETAAAVVERNAEGHCNVLSDVVLSQLDEHSAYGGVVPEIAARAHVEALDEL 66
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
+++AL +AN++ D+ A+A T GPGL L VG+ + IA P+ ++H+E HAL
Sbjct: 67 IEQALKRANVSLADVDAIAATSGPGLIGGLLVGLMTGKAIARAAGKPLYAINHLEGHALT 126
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
AR LT + +L L + GH L+L +GQY + GTTIDDA+GEAFDK
Sbjct: 127 AR--LTHG-LSFPYLVLLV--------SGGHTQLILVRGVGQYERWGTTIDDALGEAFDK 175
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPAVE++A +G+A+ F P+ +FS++GLKT VR A +
Sbjct: 176 TAKLLGLPY--PGGPAVERMARDGNADRFDFPRPLVGEARLDFSFSGLKTAVRQAAQD-- 231
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH---LVVS 367
I+ S QD A+I ASFQR L++R R ++ + P+ LVV+
Sbjct: 232 ------IAPLSDQD---VADICASFQRAISRTLKDRIGRGLQRFKREFPATGEKPALVVA 282
Query: 368 GGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADD 427
GGVA+N +RA L N + + PP SLCTDN VM+AW G+E G
Sbjct: 283 GGVAANLELRATLQALCDKNGFRFIAPPLSLCTDNAVMIAWAGLERMATGV--------A 334
Query: 428 PEDFMYDLRPRWPL 441
P+ R RWPL
Sbjct: 335 PDTLDVQPRSRWPL 348
>sp|Q2GGH9|GCP_EHRCR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Ehrlichia chaffeensis (strain Arkansas) GN=gcp PE=3
SV=1
Length = 349
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 201/368 (54%), Gaps = 34/368 (9%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
I+LGIETSCD+TA A+V N E+LS + SQ + A YGGV P++A AH + +V
Sbjct: 6 IVLGIETSCDETAVAIVNSNKEVLSHKILSQQEH-AAYGGVVPEIASRAHINYLYELVGS 64
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
+ ++ L D+ A+AVT GPGL L VG+ A+ I+ PI+ ++H+EAHAL+ R
Sbjct: 65 CIEESQLCFNDIDAIAVTAGPGLIGGLIVGIMMAKAISSVTGKPIIEINHLEAHALIIRM 124
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
+ + FL L + GH ++A+++ Y +LG+++DD++GE FDK A+
Sbjct: 125 FY---EIDFPFLLLIM--------SGGHCQFLVAYDVRCYYKLGSSLDDSLGEVFDKVAR 173
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
L L GGP +E+ +L GD+ S + C+FS++GLKT VR NI
Sbjct: 174 MLNLGY--PGGPIIEEKSLLGDSGSFTLPRALTNRPGCDFSFSGLKTAVR------NI-- 223
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASN 373
I+ C + + NI+ASFQ L R AI + I+ I LVV+GGVA+N
Sbjct: 224 ---IAGQKCINHELVCNISASFQDCVGDILVNRINNAIVMSKDIDHRINKLVVTGGVAAN 280
Query: 374 KYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMY 433
K +R R+ +N +++ PP LCTDNGVM+ W GIE+ G + +
Sbjct: 281 KLLRNRMSVCANDNGFEILYPPSKLCTDNGVMIGWAGIENLAKGYV---------SNLNF 331
Query: 434 DLRPRWPL 441
R RWPL
Sbjct: 332 FPRARWPL 339
>sp|A9IZF6|GCP_BART1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
GN=gcp PE=3 SV=1
Length = 364
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 204/383 (53%), Gaps = 48/383 (12%)
Query: 75 ILGIETSCDDTAAAVVRGNGE----ILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPV 130
+LGIETSCD+TAAAV+ N E ILS +V SQ D A YGGV P++A AH +D +
Sbjct: 3 LLGIETSCDETAAAVIEYNNESSSRILSNIVWSQIDHHAPYGGVVPEIAARAHVEILDHL 62
Query: 131 VQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190
+ +AL +AN +D+ +A T GPGL L VGV A+ ++ P + V+H+E HAL
Sbjct: 63 ILQALTEANTKLKDIDGIAATSGPGLIGGLLVGVMSAKALSLATGKPFIAVNHLEGHALT 122
Query: 191 ARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDK 250
A + ++ +L L + GH +L H +G Y +LGTTIDDA+GEAFDK
Sbjct: 123 A---VLTHNVKFPYLLLLV--------SGGHTQTILVHGVGNYQRLGTTIDDALGEAFDK 171
Query: 251 TAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310
TAK LGL GGPA+EK AL GD + P+K K +FS++GLKT VR A +
Sbjct: 172 TAKLLGLPY--PGGPALEKAALLGDKNRIPLPRPLKGEKRLDFSFSGLKTAVRQAATAIA 229
Query: 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEP----SIKH--- 363
P++ D IAASFQ + +R A++ P KH
Sbjct: 230 -----PLTENDVAD------IAASFQAAVTDTVRDRVHLALQHFTHQYPLSHDQEKHSPA 278
Query: 364 LVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPP 423
LVV+GGVA+N+ +R+ L + + + PP SLCTDN M+A+ G + G
Sbjct: 279 LVVAGGVAANQALRSTLQELAHQHGFEFIAPPLSLCTDNAAMIAFAGAQKLAQG------ 332
Query: 424 PADDPEDFMYDLRP--RWPLGEE 444
E D+ P RWPL E+
Sbjct: 333 -----ETSSLDIAPRSRWPLDEK 350
>sp|Q9H4B0|OSGP2_HUMAN Probable tRNA threonylcarbamoyladenosine biosynthesis protein
OSGEPL1 OS=Homo sapiens GN=OSGEPL1 PE=2 SV=2
Length = 414
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 201/387 (51%), Gaps = 29/387 (7%)
Query: 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE 133
I+LGIETSCDDTAAAVV G +L + + SQ ++ K GG+ P A++ H I +VQE
Sbjct: 38 IVLGIETSCDDTAAAVVDETGNVLGEAIHSQTEVHLKTGGIVPPAAQQLHRENIQRIVQE 97
Query: 134 ALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193
AL + ++ DLSA+A TI PGL+L L VG+ + ++ GQ P + +HHMEAHAL R
Sbjct: 98 ALSASGVSPSDLSAIATTIKPGLALSLGVGLSFSLQLVGQLKKPFIPIHHMEAHALTIR- 156
Query: 194 WLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
+++ FL L + GH LL L + + LG ++D A G+ DK A+
Sbjct: 157 --LTNKVEFPFLVLL--------ISGGHCLLALVQGVSDFLLLGKSLDIAPGDMLDKVAR 206
Query: 254 WLGLDMR-----RSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
L L SGG A+E LA +G+ P+ K+C+FS+ GL+ I
Sbjct: 207 RLSLIKHPECSTMSGGKAIEHLAKQGNRFHFDIKPPLHHAKNCDFSFTGLQHVTDKII-- 264
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALK---IEPSIKHLV 365
+ Q S A+IAA+ Q HL +R RAI + + + + LV
Sbjct: 265 --MKKEKEEGIEKGQILSSAADIAATVQHTMACHLVKRTHRAILFCKQRDLLPQNNAVLV 322
Query: 366 VSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPA 425
SGGVASN Y+R L+ L+CPPP LCTDNG+M+AW GIE G
Sbjct: 323 ASGGVASNFYIRRALEILTNATQCTLLCPPPRLCTDNGIMIAWNGIERLRAGL----GIL 378
Query: 426 DDPEDFMYDLRPRWPLGEEFAEGRSEA 452
D E Y+ P+ PLG + ++ EA
Sbjct: 379 HDIEGIRYE--PKCPLGVDISKEVGEA 403
>sp|Q6FCK9|GCP_ACIAD Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Acinetobacter sp. (strain ADP1) GN=gcp PE=3 SV=1
Length = 340
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 204/371 (54%), Gaps = 40/371 (10%)
Query: 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQ 132
+I+LG+ETSCD+T A+ +L QV+ SQ L A+YGGV P++A H + P++
Sbjct: 1 MIVLGLETSCDETGLALYDSEKGLLGQVLYSQIKLHAEYGGVVPELASRDHVRKMIPLLD 60
Query: 133 EALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVAR 192
+ L+ + + + + AVA T GPGL L G R +A N P +GVHHME H L
Sbjct: 61 QLLNDSQVKKSQIDAVAYTRGPGLMGALMTGALFGRTLAFALNKPAIGVHHMEGHMLAP- 119
Query: 193 QWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTA 252
L+ T + F+ L + GH L+ A+ +GQY LG +IDDA GEAFDK A
Sbjct: 120 -LLSATPPEFPFVALLV--------SGGHTQLMAAYGIGQYELLGESIDDAAGEAFDKVA 170
Query: 253 KWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNID 312
K +GL GGP + KLAL+G+ E+ +F PM H+ +FS++GLKT V + ++ +
Sbjct: 171 KMMGLPY--PGGPNIAKLALQGNPETFEFPRPM-LHQGLDFSFSGLKTSVSVQLKKLGEE 227
Query: 313 SRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVAS 372
+R A+IAASFQ V L ++ +A++ + +K LV++GGV++
Sbjct: 228 NR-------------DADIAASFQEAIVDTLVKKSVKALK-----QTGLKRLVIAGGVSA 269
Query: 373 NKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFM 432
N+ +R RL+ ++ Q+ P+LCTDNG M+A+ G + G+ D D +
Sbjct: 270 NQRLRERLEHSLSKIKSQVYYAEPALCTDNGAMIAFAGYQRLKAGQCD---------DLV 320
Query: 433 YDLRPRWPLGE 443
PRWP+ E
Sbjct: 321 VTTTPRWPMTE 331
>sp|B1LF56|GCP_ECOSM Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gcp PE=3
SV=1
Length = 337
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAP--- 119
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
M D F + + + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 120 -----MLEDNPPAFPFVAL--LVSGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|B8CJF1|GCP_SHEPW Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Shewanella piezotolerans (strain WP3 / JCM 13877)
GN=gcp PE=3 SV=1
Length = 338
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 197/367 (53%), Gaps = 38/367 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T AV + +LS + SQ L A YGGV P++A H I P++++A
Sbjct: 3 VLGIETSCDETGIAVYDDDKGLLSHTLYSQVKLHADYGGVVPELASRDHVRKIVPLIRQA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L A++T D+ +A T GPGL L VG R +A ++ P +GVHHME H L
Sbjct: 63 LADADMTIEDIDGIAYTKGPGLIGALLVGACVGRALAFSWDKPAIGVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + FL L + GH++LV +G+Y LG ++DDA GEAFDKTAK
Sbjct: 121 LEDDVPEFPFLALLV--------SGGHSMLVGVEGIGRYEVLGESVDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
+GLD GGP + KLA +G A S +F PM NFS++GLKT I ++
Sbjct: 173 MGLDY--PGGPRLSKLAAKGVANSYRFPRPMTDKPGLNFSFSGLKTFAANTIAAEP---- 226
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
D ++RANIA +F+ V L +C+RA++ + + LV++GGV++N
Sbjct: 227 --------NDEQTRANIACAFEEAVVDTLAIKCKRALK-----QTGYQRLVIAGGVSANT 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L + N ++ P CTDNG M+A+ G++ G+ D D
Sbjct: 274 RLRAQLAEMMTNLGGKVFYPRGEFCTDNGAMIAYAGLQRLKAGQTD---------DLGVK 324
Query: 435 LRPRWPL 441
+PRWPL
Sbjct: 325 GQPRWPL 331
>sp|Q1MAQ8|GCP_RHIL3 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=gcp PE=3 SV=1
Length = 365
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 206/376 (54%), Gaps = 39/376 (10%)
Query: 73 LIILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAID 128
L ILGIETSCD+TAAAVV G+ +LS VV SQ D + YGGV P++A AH A+D
Sbjct: 5 LRILGIETSCDETAAAVVERDAEGHSNVLSDVVLSQLDEHSAYGGVVPEIAARAHVEALD 64
Query: 129 PVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHA 188
+++EAL +AN++ D+ A+A T GPGL L VG+ + IA P+ ++H+E HA
Sbjct: 65 ELIEEALKRANVSLNDVDAIAATSGPGLIGGLLVGLMTGKAIARAAGKPLYAINHLEGHA 124
Query: 189 LVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAF 248
L AR D + ++ + GH L+L +GQY + GTTIDDA+GEAF
Sbjct: 125 LTAR-----------LTDGLSFPYLMLLVSGGHTQLILVRGVGQYERWGTTIDDALGEAF 173
Query: 249 DKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
DKTAK LGL GGPAVE++A +G+ + F P+ +FS++GLKT VR A +
Sbjct: 174 DKTAKLLGLPY--PGGPAVERMARDGNPDRFDFPRPLVGEARLDFSFSGLKTAVRQAAQD 231
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKH---LV 365
I+ S QD A+I ASFQ+ L++R R ++ P+ LV
Sbjct: 232 --------IAPLSDQD---VADICASFQKAVSRTLKDRIGRGLQRFKTEFPATGEKPALV 280
Query: 366 VSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPA 425
V+GGVA+N +R L N + + PP LCTDN VM+AW G+E G
Sbjct: 281 VAGGVAANLELRGTLQALCNKNGFRFIAPPLHLCTDNAVMIAWAGLERMATGAA------ 334
Query: 426 DDPEDFMYDLRPRWPL 441
P+ R RWPL
Sbjct: 335 --PDTLDVQPRSRWPL 348
>sp|Q1R6R7|GCP_ECOUT Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli (strain UTI89 / UPEC) GN=gcp PE=3
SV=1
Length = 337
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|Q8FDG6|GCP_ECOL6 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|Q0TD42|GCP_ECOL5 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|A1AFY6|GCP_ECOK1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli O1:K1 / APEC GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|B7N068|GCP_ECO81 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli O81 (strain ED1a) GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|B7MB00|GCP_ECO45 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gcp
PE=3 SV=1
Length = 337
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++QEA
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQEA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +++P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|B5ZTC5|GCP_RHILW Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304)
GN=gcp PE=3 SV=1
Length = 365
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 209/378 (55%), Gaps = 43/378 (11%)
Query: 73 LIILGIETSCDDTAAAVVR----GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAID 128
L ILGIETSCD+TAAAVV GN +LS VV SQ D + YGGV P++A AH A+D
Sbjct: 5 LRILGIETSCDETAAAVVERDAEGNARVLSDVVLSQLDEHSAYGGVVPEIAARAHVEALD 64
Query: 129 PVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHA 188
+++EAL++AN++ ++ A+A T GPGL L VG+ + IA P+ V+H+E HA
Sbjct: 65 ELIEEALNRANVSLDEVDAIAATSGPGLIGGLLVGLMTGKAIARAAGKPLYAVNHLEGHA 124
Query: 189 LVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAF 248
L AR D ++ + GH L+L +G+Y + GTTIDDA+GEAF
Sbjct: 125 LTAR-----------LTDGLAFPYLMLLVSGGHTQLILVRGVGEYQRWGTTIDDALGEAF 173
Query: 249 DKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIES 308
DKTAK LGL GGPAVE++A +G+ + F P+ +FS++GLKT VR A +
Sbjct: 174 DKTAKLLGLPY--PGGPAVERMARDGNPDRFAFPRPLVGEARLDFSFSGLKTAVRQAAQD 231
Query: 309 KNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAI-----EWALKIEPSIKH 363
I+ S QD A+I ASFQ+ L++R R + E+A E
Sbjct: 232 --------IAPISDQD---VADICASFQKAISRTLKDRIGRGLQRFKTEFAATDEK--PA 278
Query: 364 LVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPP 423
LVV+GGVA+N +R L N + + PP LCTDN VM+AW G+E G
Sbjct: 279 LVVAGGVAANLELRGTLQALCDKNGFRFIAPPLHLCTDNAVMIAWAGLERMATG------ 332
Query: 424 PADDPEDFMYDLRPRWPL 441
A DP D R RWPL
Sbjct: 333 AAPDPLDVQP--RSRWPL 348
>sp|A9MPV5|GCP_SALAR Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86
/ RSK2980) GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 40/370 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++Q A
Sbjct: 3 VLGIETSCDETGIAIYDDERGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L +A L D+ AVA T GPGL L VG R +A +N+P + VHHME H L
Sbjct: 63 LKEAGLMASDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLA---- 118
Query: 195 LTMTRMQNDFLDL-FNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAK 253
++++ D F + + + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 119 ---PMLEDNPPDFPFVALLV----SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAK 171
Query: 254 WLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDS 313
LGLD GGP + K+AL+G A F PM +FS++GLKT I S
Sbjct: 172 LLGLDY--PGGPMLSKMALQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRSNG--- 226
Query: 314 RIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASN 373
+D ++RA+IA +F+ V L +C+RA+E K LV++GGV++N
Sbjct: 227 ---------EDEQTRADIARAFEDAVVDTLMIKCKRALE-----STGFKRLVMAGGVSAN 272
Query: 374 KYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMY 433
+ +RA+L ++ ++ P CTDNG M+A+ G+ F G D
Sbjct: 273 QTLRAKLAEMMQKRCGEVFYARPEFCTDNGAMIAYAGMVRFKAGV---------TADLGV 323
Query: 434 DLRPRWPLGE 443
+RPRWPL E
Sbjct: 324 TVRPRWPLAE 333
>sp|A9N5Y7|GCP_SALPB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 190/369 (51%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++Q A
Sbjct: 3 VLGIETSCDETGIAIYDDKKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L +A LT D+ AVA T GPGL L VG R +A +N+P + VHHME H L
Sbjct: 63 LKEAGLTASDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I S
Sbjct: 173 LGLDY--PGGPMLSKMASQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRSNG---- 226
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
D ++RA+IA +F+ V L +C+RA+E K LV++GGV++N+
Sbjct: 227 --------DDEQTRADIARAFEDAVVDTLMIKCKRALE-----STGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L ++ ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGV---------TADLGVT 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|B4T678|GCP_SALNS Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Salmonella newport (strain SL254) GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 190/369 (51%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++Q A
Sbjct: 3 VLGIETSCDETGIAIYDDKKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L +A LT D+ AVA T GPGL L VG R +A +N+P + VHHME H L
Sbjct: 63 LKEAGLTASDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I S
Sbjct: 173 LGLDY--PGGPMLSKMASQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRSNG---- 226
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
D ++RA+IA +F+ V L +C+RA+E K LV++GGV++N+
Sbjct: 227 --------DDEQTRADIARAFEDAVVDTLMIKCKRALE-----STGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L ++ ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGV---------TADLGVT 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
>sp|Q3YXH9|GCP_SHISS Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Shigella sonnei (strain Ss046) GN=gcp PE=3 SV=1
Length = 337
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 191/369 (51%), Gaps = 38/369 (10%)
Query: 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEA 134
+LGIETSCD+T A+ +L+ + SQ L A YGGV P++A H P++Q A
Sbjct: 3 VLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAA 62
Query: 135 LHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQW 194
L ++ LT +D+ AVA T GPGL L VG R +A +N+P + VHHME H L
Sbjct: 63 LKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAWNVPAIPVHHMEGHLLA--PM 120
Query: 195 LTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKW 254
L + F+ L + GH L+ +GQY LG +IDDA GEAFDKTAK
Sbjct: 121 LEDNPPEFPFVALLV--------SGGHTQLISVTGIGQYELLGESIDDAAGEAFDKTAKL 172
Query: 255 LGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSR 314
LGLD GGP + K+A +G A F PM +FS++GLKT I D
Sbjct: 173 LGLDY--PGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRDNGTDD- 229
Query: 315 IPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNK 374
++RA+IA +F+ V L +C+RA++ + K LV++GGV++N+
Sbjct: 230 -----------QTRADIARAFEDAVVDTLMIKCKRALD-----QTGFKRLVMAGGVSANR 273
Query: 375 YVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYD 434
+RA+L +K ++ P CTDNG M+A+ G+ F G D
Sbjct: 274 TLRAKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGA---------TADLGVS 324
Query: 435 LRPRWPLGE 443
+RPRWPL E
Sbjct: 325 VRPRWPLAE 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,277,103
Number of Sequences: 539616
Number of extensions: 7120841
Number of successful extensions: 20867
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 17007
Number of HSP's gapped (non-prelim): 824
length of query: 477
length of database: 191,569,459
effective HSP length: 121
effective length of query: 356
effective length of database: 126,275,923
effective search space: 44954228588
effective search space used: 44954228588
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)