Query 039172
Match_columns 477
No_of_seqs 325 out of 2402
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 11:36:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039172.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039172hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eno_A Putative O-sialoglycopr 100.0 9.4E-74 3.2E-78 584.6 34.6 322 71-444 4-325 (334)
2 3en9_A Glycoprotease, O-sialog 100.0 4.5E-71 1.6E-75 596.9 36.2 320 72-444 5-324 (540)
3 2ivn_A O-sialoglycoprotein end 100.0 1.3E-66 4.4E-71 530.7 32.4 319 73-444 1-320 (330)
4 3ven_A O-carbamoyltransferase 100.0 1.6E-45 5.4E-50 396.9 19.7 311 74-419 11-362 (576)
5 3ttc_A HYPF, transcriptional r 100.0 1.9E-33 6.4E-38 307.3 27.9 233 129-412 344-649 (657)
6 3vth_A Hydrogenase maturation 100.0 5.5E-33 1.9E-37 308.6 31.6 281 74-415 401-748 (761)
7 4g9i_A Hydrogenase maturation 100.0 7.9E-32 2.7E-36 300.5 25.4 349 30-415 353-762 (772)
8 4ehu_A Activator of 2-hydroxyi 100.0 1.6E-30 5.3E-35 256.5 26.3 256 73-417 1-259 (276)
9 3r6m_A YEAZ, resuscitation pro 99.9 1E-25 3.6E-30 216.1 13.1 127 72-218 1-130 (213)
10 2gel_A Putative GRAM negative 99.9 3.7E-24 1.3E-28 207.7 14.3 122 74-216 2-127 (231)
11 2a6a_A Hypothetical protein TM 99.9 1.1E-24 3.8E-29 209.7 10.2 125 72-217 11-136 (218)
12 1hux_A Activator of (R)-2-hydr 99.7 2.4E-14 8.2E-19 141.4 26.1 235 73-395 3-240 (270)
13 2ews_A Pantothenate kinase; PA 99.5 1.1E-12 3.7E-17 131.0 24.0 245 70-396 17-273 (287)
14 2i7n_A Pantothenate kinase 1; 98.8 3.7E-07 1.3E-11 93.5 19.6 218 127-396 84-345 (360)
15 2qm1_A Glucokinase; alpha-beta 98.1 0.00058 2E-08 67.6 22.7 109 74-193 7-127 (326)
16 3qbx_A Anhydro-N-acetylmuramic 97.9 0.00091 3.1E-08 68.6 20.9 287 73-418 2-341 (371)
17 4db3_A Glcnac kinase, N-acetyl 97.7 0.0039 1.3E-07 62.3 22.1 105 72-192 23-138 (327)
18 2gup_A ROK family protein; sug 97.6 0.017 5.8E-07 56.2 24.4 97 73-192 4-112 (292)
19 1z05_A Transcriptional regulat 97.6 0.008 2.7E-07 62.3 22.6 110 72-193 107-227 (429)
20 2aa4_A Mannac kinase, putative 97.6 0.011 3.9E-07 57.3 22.2 103 73-193 1-115 (289)
21 3h1q_A Ethanolamine utilizatio 97.6 0.046 1.6E-06 52.3 26.2 240 73-409 28-269 (272)
22 3vgl_A Glucokinase; ROK family 97.4 0.014 4.7E-07 58.0 20.9 103 73-193 2-115 (321)
23 3vov_A Glucokinase, hexokinase 97.4 0.0059 2E-07 60.3 17.7 105 73-193 1-117 (302)
24 3ezw_A Glycerol kinase; glycer 97.4 0.052 1.8E-06 57.8 26.3 76 74-151 5-80 (526)
25 3r8e_A Hypothetical sugar kina 97.4 0.017 6E-07 57.3 21.2 109 70-193 16-137 (321)
26 1z6r_A MLC protein; transcript 97.4 0.0078 2.7E-07 61.7 19.1 110 72-193 84-205 (406)
27 4htl_A Beta-glucoside kinase; 97.4 0.043 1.5E-06 53.9 23.6 102 72-193 3-116 (297)
28 2hoe_A N-acetylglucosamine kin 97.4 0.016 5.5E-07 59.0 21.0 111 72-193 86-207 (380)
29 3ifr_A Carbohydrate kinase, FG 97.3 0.029 9.7E-07 59.6 23.2 77 73-151 7-83 (508)
30 2ch5_A NAGK protein; transfera 97.3 0.14 4.7E-06 50.8 26.8 107 73-190 6-117 (347)
31 3cqy_A Anhydro-N-acetylmuramic 97.2 0.062 2.1E-06 55.0 22.4 286 73-418 5-347 (370)
32 2yhw_A Bifunctional UDP-N-acet 97.0 0.078 2.7E-06 52.8 21.2 109 72-193 29-150 (343)
33 2ap1_A Putative regulator prot 96.7 0.084 2.9E-06 52.2 18.8 104 73-192 24-138 (327)
34 2e2o_A Hexokinase; acetate and 96.6 0.54 1.9E-05 45.6 26.8 101 72-190 1-102 (299)
35 1zbs_A Hypothetical protein PG 96.4 0.52 1.8E-05 45.8 21.4 100 75-190 2-104 (291)
36 1saz_A Probable butyrate kinas 96.3 0.87 3E-05 46.3 23.3 106 73-185 2-131 (381)
37 3mcp_A Glucokinase; structural 94.9 2.6 8.8E-05 42.8 20.6 103 72-193 8-127 (366)
38 3htv_A D-allose kinase, alloki 94.1 4.7 0.00016 39.5 22.0 102 73-189 7-122 (310)
39 1sz2_A Glucokinase, glucose ki 94.0 5.1 0.00018 39.4 20.0 98 70-191 11-119 (332)
40 1zc6_A Probable N-acetylglucos 92.8 1.3 4.5E-05 43.1 13.3 101 74-189 12-116 (305)
41 2p3r_A Glycerol kinase; glycer 92.8 0.23 8E-06 52.6 8.3 79 72-152 2-80 (510)
42 4bc3_A Xylulose kinase; transf 92.4 0.37 1.3E-05 51.4 9.2 81 72-152 9-98 (538)
43 4e1j_A Glycerol kinase; struct 91.7 0.45 1.6E-05 50.5 9.0 76 74-151 27-102 (520)
44 3h3n_X Glycerol kinase; ATP-bi 91.7 0.35 1.2E-05 51.1 8.0 78 73-152 5-82 (506)
45 2dpn_A Glycerol kinase; thermu 91.5 0.37 1.3E-05 50.7 7.9 76 74-151 3-78 (495)
46 3l0q_A Xylulose kinase; xlylul 91.4 0.29 9.8E-06 52.4 7.0 80 72-153 4-83 (554)
47 3g25_A Glycerol kinase; IDP007 91.3 0.39 1.3E-05 50.6 7.9 77 74-152 7-83 (501)
48 2zf5_O Glycerol kinase; hypert 91.3 0.37 1.3E-05 50.7 7.7 76 74-151 4-79 (497)
49 3h3n_X Glycerol kinase; ATP-bi 91.0 1.7 5.9E-05 45.8 12.5 83 327-419 373-455 (506)
50 3g25_A Glycerol kinase; IDP007 91.0 1.2 4E-05 47.0 11.1 83 327-419 374-456 (501)
51 3i8b_A Xylulose kinase; strain 90.9 1.3 4.3E-05 47.1 11.3 82 327-419 395-476 (515)
52 3l0q_A Xylulose kinase; xlylul 90.6 1.6 5.5E-05 46.5 12.0 82 327-419 410-494 (554)
53 2p3r_A Glycerol kinase; glycer 90.0 1.8 6.3E-05 45.6 11.7 83 327-419 371-453 (510)
54 3hz6_A Xylulokinase; xylulose, 90.0 0.62 2.1E-05 49.3 8.0 79 74-155 6-85 (511)
55 2d4w_A Glycerol kinase; alpha 90.0 1.7 5.7E-05 45.8 11.3 76 74-151 3-78 (504)
56 2zf5_O Glycerol kinase; hypert 89.9 1.2 4.2E-05 46.7 10.1 81 327-419 365-445 (497)
57 2dpn_A Glycerol kinase; thermu 89.8 1.2 4.3E-05 46.6 10.1 81 327-418 368-449 (495)
58 1hjr_A Holliday junction resol 89.6 1.5 5.1E-05 39.5 9.0 23 73-95 1-23 (158)
59 2w40_A Glycerol kinase, putati 89.4 1.9 6.4E-05 45.4 11.1 84 326-419 375-459 (503)
60 3ll3_A Gluconate kinase; xylul 89.2 1.7 5.8E-05 45.8 10.6 83 326-419 363-445 (504)
61 2w40_A Glycerol kinase, putati 89.1 0.63 2.1E-05 49.0 7.2 77 74-152 5-83 (503)
62 2d4w_A Glycerol kinase; alpha 89.1 0.81 2.8E-05 48.2 8.0 84 326-419 372-455 (504)
63 2uyt_A Rhamnulokinase; rhamnos 89.0 1.7 6E-05 45.3 10.5 81 326-417 362-442 (489)
64 2itm_A Xylulose kinase, xylulo 88.9 1.4 4.7E-05 46.1 9.6 84 326-419 356-439 (484)
65 4ep4_A Crossover junction endo 88.9 1.4 4.7E-05 40.1 8.3 23 73-95 1-23 (166)
66 4g9i_A Hydrogenase maturation 88.6 0.58 2E-05 52.4 6.7 159 237-417 604-767 (772)
67 3hz6_A Xylulokinase; xylulose, 88.5 2.7 9.2E-05 44.4 11.6 80 327-419 375-455 (511)
68 4e1j_A Glycerol kinase; struct 88.3 1.6 5.4E-05 46.3 9.6 81 327-419 393-477 (520)
69 3jvp_A Ribulokinase; PSI-II, N 87.9 0.9 3.1E-05 48.7 7.5 81 326-417 409-490 (572)
70 3ll3_A Gluconate kinase; xylul 87.5 1.2 4E-05 47.1 8.0 78 73-155 4-82 (504)
71 3djc_A Type III pantothenate k 87.3 2 6.9E-05 41.7 9.0 66 73-154 2-68 (266)
72 1vhx_A Putative holliday junct 86.4 1.4 4.9E-05 39.1 6.8 86 73-182 3-97 (150)
73 1woq_A Inorganic polyphosphate 86.3 11 0.00038 35.6 13.6 112 70-193 9-133 (267)
74 3epq_A Putative fructokinase; 84.8 6.4 0.00022 38.4 11.3 99 72-193 2-116 (302)
75 4bc3_A Xylulose kinase; transf 84.1 3.4 0.00012 43.8 9.6 80 327-417 405-484 (538)
76 3jvp_A Ribulokinase; PSI-II, N 84.1 3.7 0.00013 43.9 9.9 79 73-152 5-94 (572)
77 2itm_A Xylulose kinase, xylulo 82.2 3.2 0.00011 43.3 8.3 73 75-151 2-74 (484)
78 3i8b_A Xylulose kinase; strain 81.6 3.6 0.00012 43.5 8.5 67 73-152 5-72 (515)
79 3i33_A Heat shock-related 70 k 81.0 3.2 0.00011 41.7 7.6 70 341-415 332-401 (404)
80 2yhx_A Hexokinase B; transfera 78.5 67 0.0023 33.4 21.7 114 72-193 60-198 (457)
81 3qfu_A 78 kDa glucose-regulate 78.3 4.4 0.00015 40.3 7.6 65 341-410 324-388 (394)
82 1cza_N Hexokinase type I; stru 77.6 1E+02 0.0034 34.9 21.8 110 72-193 77-219 (917)
83 4gni_A Putative heat shock pro 77.5 6.2 0.00021 39.7 8.5 82 328-411 313-397 (409)
84 2uyt_A Rhamnulokinase; rhamnos 76.7 0.87 3E-05 47.6 1.8 78 72-152 3-81 (489)
85 1dkg_D Molecular chaperone DNA 76.7 5.7 0.00019 39.5 7.8 64 341-410 314-377 (383)
86 2e1z_A Propionate kinase; TDCD 76.4 8.5 0.00029 39.8 9.1 72 339-414 309-406 (415)
87 2h3g_X Biosynthetic protein; p 75.3 12 0.0004 36.3 9.4 63 74-151 1-63 (268)
88 1g99_A Acetate kinase; alpha/b 74.8 10 0.00035 39.2 9.1 73 339-415 301-397 (408)
89 4h0o_A Acetate kinase; askha ( 73.5 4.6 0.00016 41.6 6.1 50 339-389 305-356 (404)
90 3khy_A Propionate kinase; csgi 72.9 7.9 0.00027 39.6 7.7 51 339-390 292-344 (384)
91 1iv0_A Hypothetical protein; r 70.8 24 0.00082 28.8 8.9 88 73-182 1-92 (98)
92 4ijn_A Acetate kinase, acetoki 68.3 3.6 0.00012 42.4 4.0 73 67-150 17-92 (398)
93 1zxo_A Conserved hypothetical 65.8 7.4 0.00025 37.5 5.6 97 75-189 2-101 (291)
94 2v7y_A Chaperone protein DNAK; 65.5 12 0.0004 39.3 7.4 70 342-417 284-353 (509)
95 3r9p_A ACKA; ssgcid, seattle s 65.1 5.7 0.00019 40.8 4.7 72 70-150 9-83 (391)
96 3h6e_A Carbohydrate kinase, FG 62.9 7.5 0.00026 40.8 5.3 69 74-151 7-75 (482)
97 4b9q_A Chaperone protein DNAK; 62.4 15 0.0005 39.6 7.6 73 340-418 313-385 (605)
98 3lma_A Stage V sporulation pro 61.9 29 0.001 35.0 9.2 45 128-178 210-254 (347)
99 1nu0_A Hypothetical protein YQ 57.9 37 0.0013 29.5 8.1 89 74-183 4-96 (138)
100 2w6k_A COBE; biosynthetic prot 57.0 25 0.00085 30.9 6.8 51 125-182 25-75 (145)
101 2q2r_A Glucokinase 1, putative 56.0 30 0.001 34.4 8.2 101 72-190 28-144 (373)
102 2iir_A Acetate kinase; transfe 55.5 13 0.00046 38.2 5.5 49 339-388 301-351 (403)
103 3h6e_A Carbohydrate kinase, FG 55.1 23 0.00078 37.0 7.4 32 362-396 389-421 (482)
104 1yuw_A Heat shock cognate 71 k 54.7 18 0.00063 38.3 6.7 72 341-417 311-382 (554)
105 1jce_A ROD shape-determining p 53.9 18 0.00063 35.2 6.1 42 362-409 279-320 (344)
106 4e1l_A Acetoacetyl-COA thiolas 52.7 18 0.00061 36.5 5.9 55 125-183 31-89 (395)
107 1cza_N Hexokinase type I; stru 52.0 3E+02 0.01 31.0 20.8 123 71-208 524-677 (917)
108 3lma_A Stage V sporulation pro 51.3 29 0.001 34.9 7.1 50 125-182 57-107 (347)
109 3d2f_A Heat shock protein homo 50.5 35 0.0012 37.3 8.1 70 342-417 316-385 (675)
110 4ijn_A Acetate kinase, acetoki 50.3 28 0.00096 35.7 6.8 51 339-389 302-353 (398)
111 4dd5_A Acetyl-COA acetyltransf 50.2 19 0.00066 36.3 5.7 54 125-183 33-91 (396)
112 3ss6_A Acetyl-COA acetyltransf 49.5 20 0.00068 36.2 5.7 53 125-182 31-88 (394)
113 3epq_A Putative fructokinase; 48.3 35 0.0012 33.0 7.1 50 359-411 223-286 (302)
114 2ych_A Competence protein PILM 45.8 87 0.003 30.6 9.7 52 340-394 284-337 (377)
115 3h78_A PQS biosynthetic enzyme 44.1 32 0.0011 34.3 6.2 55 126-183 77-133 (359)
116 3bzc_A TEX; helix-turn-helix, 43.6 1.4E+02 0.0049 33.2 11.7 97 72-190 328-428 (785)
117 3sk3_A Acetate kinase, acetoki 42.9 32 0.0011 35.5 6.0 51 339-389 317-369 (415)
118 4dfe_A 3-oxoacyl-[acyl-carrier 41.9 24 0.00084 34.5 4.8 28 125-152 67-94 (333)
119 1zxo_A Conserved hypothetical 41.6 9 0.00031 36.9 1.5 43 360-410 232-274 (291)
120 2zgy_A Plasmid segregation pro 41.3 65 0.0022 31.1 7.8 42 360-409 272-316 (320)
121 2kho_A Heat shock protein 70; 39.1 20 0.00069 38.5 4.0 48 359-412 332-379 (605)
122 3goa_A 3-ketoacyl-COA thiolase 39.1 39 0.0013 34.0 5.9 55 125-183 29-89 (387)
123 1j5p_A Aspartate dehydrogenase 38.5 60 0.002 31.2 6.8 43 358-400 82-124 (253)
124 4h0p_A Acetate kinase; askha ( 38.5 31 0.0011 35.8 5.0 90 71-162 4-113 (438)
125 2w36_A Endonuclease V; hypoxan 38.2 52 0.0018 31.1 6.2 97 72-182 36-138 (225)
126 3il3_A 3-oxoacyl-[acyl-carrier 37.0 43 0.0015 32.8 5.7 29 124-152 223-251 (323)
127 1u6e_A 3-oxoacyl-[acyl-carrier 36.9 39 0.0013 32.7 5.4 29 125-153 63-91 (335)
128 3r9p_A ACKA; ssgcid, seattle s 36.7 71 0.0024 32.7 7.3 50 339-389 293-344 (391)
129 3s3l_A CERJ; acyltransferase, 36.7 48 0.0016 32.9 6.1 54 126-183 57-114 (357)
130 3psf_A Transcription elongatio 36.4 2E+02 0.007 33.0 11.8 99 73-190 519-629 (1030)
131 4efi_A 3-oxoacyl-(acyl-carrier 36.4 32 0.0011 34.1 4.8 26 127-152 70-95 (354)
132 3gwa_A 3-oxoacyl-(acyl-carrier 35.8 33 0.0011 34.2 4.7 31 126-156 83-114 (365)
133 3h78_A PQS biosynthetic enzyme 35.7 46 0.0016 33.1 5.7 29 124-152 253-281 (359)
134 2q2r_A Glucokinase 1, putative 35.3 22 0.00076 35.3 3.3 49 360-411 304-368 (373)
135 3il3_A 3-oxoacyl-[acyl-carrier 35.2 36 0.0012 33.3 4.8 27 126-152 61-87 (323)
136 4ewp_A 3-oxoacyl-[acyl-carrier 35.0 36 0.0012 33.3 4.8 44 125-177 249-292 (350)
137 3oit_A OS07G0271500 protein; t 34.2 41 0.0014 33.9 5.2 26 127-152 100-125 (387)
138 4efi_A 3-oxoacyl-(acyl-carrier 34.2 41 0.0014 33.3 5.1 29 124-152 243-271 (354)
139 4dfe_A 3-oxoacyl-[acyl-carrier 33.9 56 0.0019 31.9 6.0 28 124-151 233-260 (333)
140 3zyy_X Iron-sulfur cluster bin 33.8 94 0.0032 33.8 8.1 82 71-154 204-299 (631)
141 1mzj_A Beta-ketoacylsynthase I 33.6 46 0.0016 32.4 5.3 41 125-170 231-271 (339)
142 2x3e_A 3-oxoacyl-[acyl-carrier 33.3 43 0.0015 32.5 5.0 41 125-170 224-264 (331)
143 4ewp_A 3-oxoacyl-[acyl-carrier 33.0 38 0.0013 33.2 4.6 28 128-155 67-95 (350)
144 3s21_A 3-oxoacyl-[ACP] synthas 32.9 41 0.0014 33.0 4.8 57 126-183 71-128 (345)
145 3gwa_A 3-oxoacyl-(acyl-carrier 32.8 41 0.0014 33.5 4.8 29 124-152 265-293 (365)
146 3euo_A Type III pentaketide sy 32.3 43 0.0015 33.6 4.9 28 128-155 86-113 (379)
147 3e1h_A PKSIIINC, putative unch 32.3 50 0.0017 34.4 5.6 28 128-155 115-142 (465)
148 3goc_A Endonuclease V; alpha-b 32.2 1.5E+02 0.005 28.2 8.2 96 72-182 39-142 (237)
149 1hnj_A Beta-ketoacyl-acyl carr 31.9 58 0.002 31.2 5.7 26 126-151 219-244 (317)
150 1zow_A 3-oxoacyl-[acyl-carrier 31.3 61 0.0021 30.9 5.7 29 125-153 53-81 (313)
151 1xho_A Chorismate mutase; sout 31.3 74 0.0025 28.1 5.5 53 126-184 52-107 (148)
152 3il6_A 3-oxoacyl-[acyl-carrier 31.0 47 0.0016 32.4 4.8 53 125-182 54-110 (321)
153 3ov2_A Curcumin synthase; type 30.9 56 0.0019 32.9 5.5 26 127-152 106-131 (393)
154 1ub7_A 3-oxoacyl-[acyl-carrier 30.9 51 0.0018 31.7 5.1 55 125-183 52-108 (322)
155 2ebd_A 3-oxoacyl-[acyl-carrier 30.8 57 0.0019 31.0 5.3 29 125-153 52-80 (309)
156 1zow_A 3-oxoacyl-[acyl-carrier 30.7 70 0.0024 30.5 6.0 41 125-170 212-252 (313)
157 3bex_A Type III pantothenate k 30.3 39 0.0013 32.1 4.0 26 73-99 3-28 (249)
158 3s21_A 3-oxoacyl-[ACP] synthas 29.7 58 0.002 31.9 5.3 27 125-151 246-272 (345)
159 3led_A 3-oxoacyl-acyl carrier 29.2 49 0.0017 33.5 4.7 30 126-155 120-150 (392)
160 3psi_A Transcription elongatio 29.1 3.1E+02 0.01 32.2 11.8 99 73-190 516-626 (1219)
161 2h84_A Steely1; thiolase-fold, 28.5 1.8E+02 0.0063 28.4 8.8 28 125-152 97-124 (374)
162 2iik_A 3-ketoacyl-COA thiolase 28.4 75 0.0026 32.3 6.0 55 125-183 57-115 (418)
163 1u6e_A 3-oxoacyl-[acyl-carrier 28.3 59 0.002 31.4 5.0 42 125-171 232-273 (335)
164 1ted_A PKS18; thiolase fold, s 27.9 60 0.0021 32.4 5.1 28 124-151 286-313 (393)
165 3ga2_A Endonuclease V; alpha-b 27.4 1.5E+02 0.0051 28.3 7.4 94 73-181 40-143 (246)
166 1hnj_A Beta-ketoacyl-acyl carr 27.1 80 0.0028 30.2 5.7 57 125-183 53-110 (317)
167 1ufy_A Chorismate mutase; shik 26.5 1.1E+02 0.0038 26.1 5.7 54 125-184 21-78 (122)
168 3v7i_A Putative polyketide syn 26.4 66 0.0022 32.9 5.1 25 128-152 142-166 (413)
169 3a5r_A Benzalacetone synthase; 25.8 75 0.0026 31.7 5.4 27 126-152 101-127 (387)
170 3svk_A Acetyl-COA acetyltransf 25.4 62 0.0021 32.8 4.7 28 125-152 34-62 (407)
171 1mzj_A Beta-ketoacylsynthase I 25.4 78 0.0027 30.7 5.3 29 125-153 62-90 (339)
172 1dbf_A Protein (chorismate mut 24.2 85 0.0029 27.0 4.5 55 125-184 22-79 (127)
173 1ulq_A Putative acetyl-COA ace 23.4 87 0.003 31.4 5.4 54 125-182 28-86 (401)
174 2d0o_A DIOL dehydratase-reacti 23.3 1.5E+02 0.0051 32.0 7.1 35 362-396 550-584 (610)
175 1u0m_A Putative polyketide syn 23.3 67 0.0023 32.0 4.4 45 124-178 252-296 (382)
176 3by5_A Cobalamin biosynthesis 23.2 1.6E+02 0.0053 26.1 6.3 48 125-182 24-71 (155)
177 2iir_A Acetate kinase; transfe 22.8 4.8E+02 0.016 26.6 10.7 133 73-210 1-148 (403)
178 1ub7_A 3-oxoacyl-[acyl-carrier 22.7 52 0.0018 31.6 3.4 27 125-151 220-246 (322)
179 1afw_A 3-ketoacetyl-COA thiola 22.7 1.2E+02 0.0042 30.3 6.3 55 125-183 37-99 (393)
180 1i88_A CHS2, chalcone synthase 22.7 90 0.0031 31.1 5.3 27 126-152 105-131 (389)
181 2ebd_A 3-oxoacyl-[acyl-carrier 22.6 53 0.0018 31.2 3.4 26 126-151 211-236 (309)
182 3led_A 3-oxoacyl-acyl carrier 22.3 1.2E+02 0.004 30.6 6.0 41 125-170 291-331 (392)
183 2wu9_A 3-ketoacyl-COA thiolase 22.3 1.5E+02 0.0052 30.3 7.0 55 125-182 57-115 (442)
184 1woq_A Inorganic polyphosphate 22.1 82 0.0028 29.4 4.6 49 360-416 214-263 (267)
185 3s3l_A CERJ; acyltransferase, 21.8 58 0.002 32.3 3.6 28 124-151 237-264 (357)
186 2p0u_A Stilbenecarboxylate syn 21.7 86 0.003 31.7 4.9 27 126-152 123-149 (413)
187 1e2b_A Enzyme IIB-cellobiose; 21.6 41 0.0014 27.6 2.0 29 364-393 8-36 (106)
188 1bdg_A Hexokinase; phosphotran 21.6 6.6E+02 0.022 25.6 24.5 119 72-208 67-217 (451)
189 3awk_A Chalcone synthase-like 21.5 1.1E+02 0.0037 30.8 5.6 27 126-152 118-144 (402)
190 1ee0_A 2-pyrone synthase; poly 21.2 1E+02 0.0035 30.9 5.4 27 126-152 110-136 (402)
191 1u0m_A Putative polyketide syn 21.0 1E+02 0.0035 30.6 5.3 28 126-153 87-114 (382)
192 1xes_A Dihydropinosylvin synth 21.0 99 0.0034 31.2 5.2 26 127-152 129-154 (413)
193 1wl4_A Acetyl-coenzyme A acety 20.9 1E+02 0.0035 30.9 5.2 55 125-183 32-90 (397)
194 3tsy_A Fusion protein 4-coumar 20.9 75 0.0026 35.7 4.6 30 128-157 694-723 (979)
195 4a2a_A Cell division protein F 20.7 2E+02 0.0068 29.2 7.4 57 328-385 291-353 (419)
196 4gni_A Putative heat shock pro 20.5 1.1E+02 0.0038 30.3 5.4 48 124-177 324-371 (409)
197 2ib8_A Acetyl-COA acetyltransf 20.1 1.1E+02 0.0038 30.5 5.3 55 125-183 34-92 (395)
No 1
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.4e-74 Score=584.63 Aligned_cols=322 Identities=28% Similarity=0.461 Sum_probs=290.6
Q ss_pred CCcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEE
Q 039172 71 DDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAV 150 (477)
Q Consensus 71 ~~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAv 150 (477)
++|+||||||||||+|+||++ |++++++.+++ .+.+||||+|+.+.++|.+.+.++|++||+++|++++|||+|||
T Consensus 4 ~~M~iLgIdts~~~~svAl~~-~~~i~~~~~~~---~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~Iav 79 (334)
T 3eno_A 4 DPMIVLGLEGTAHTISCGIID-ESRILAMESSM---YRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGF 79 (334)
T ss_dssp CCCEEEEEECSSSEEEEEEEE-SSCCCEEEEEE---CCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred cCceEEEEECCCcCeEEEEEE-CCEEEEEEEEe---eccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 469999999999999999999 66888886654 46799999999999999999999999999999999999999999
Q ss_pred ecCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccC
Q 039172 151 TIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNL 230 (477)
Q Consensus 151 t~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~ 230 (477)
+.|||+||+||||+++||+|+..+++|+++|+||++|++++++ .+++++| ++++ + |||||+++.++ .
T Consensus 80 ~~gPG~~t~lrvg~~~ak~La~~~~~Pl~~v~hl~aHa~sa~~---~s~~~~p-l~L~----v----sGg~t~l~~~~-~ 146 (334)
T 3eno_A 80 SMGPGLAPSLRVTATAARTISVLTGKPIIGVNHPLGHIEIGRR---VTGAIDP-VMLY----V----SGGNTQVIAHV-N 146 (334)
T ss_dssp ECSSSCHHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHHHHH---HHTCSSC-EEEE----E----SSSCEEEEEEC-S
T ss_pred EcCCCCcchHHHHHHHHHHHhhccCCCeEEeccHHHHHHHHHh---cCCCCCC-EEEE----E----ECCCcEEEEEe-C
Confidence 9999999999999999999999999999999999999999998 3567888 5565 6 99999998886 5
Q ss_pred CceeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhc
Q 039172 231 GQYTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310 (477)
Q Consensus 231 ~~~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~ 310 (477)
++|++||+|+|+|+|++|||||++||++|| ||++||+||.+|++ .++||.++ ++++|||+|+++++.+.+++.
T Consensus 147 ~~~~~lg~t~d~S~G~~fD~vA~~LGl~y~--g~~~le~lA~~g~~-~~~~~~~~---~~~~~sfsgl~~~v~~~l~~g- 219 (334)
T 3eno_A 147 GRYRVLGETLDIGIGNMIDKFAREAGIPFP--GGPEIEKLAMKGTK-LLDLPYSV---KGMDTAFSGILTAALQYLKTG- 219 (334)
T ss_dssp SBEEEEEEBSSCCHHHHHHHHHTTTTCCSC--HHHHHHTTGGGCCS-CCCCCCCE---ETTEECCHHHHHHHHHHHHTT-
T ss_pred CEEEEeccCCCccHHHHHHHHHHHcCCCCC--CHHHHHHHHhcCCC-CCCCceec---cCceEchHHHHHHHHHHHHcC-
Confidence 899999999999999999999999999998 89999999999986 46665554 257999999999998877542
Q ss_pred CCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCE
Q 039172 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQ 390 (477)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~ 390 (477)
.+++|||++||++++++|++++.++++ .+++++||++||||+|++||++|.+.+++.|++
T Consensus 220 ---------------~~~~diAasfq~~l~~~l~~~~~~a~~-----~~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~ 279 (334)
T 3eno_A 220 ---------------QAIEDISYSIQETAFAMLVEVLERALY-----VSGKDEILMAGGVALNRRLRDMVTNMAREAGIR 279 (334)
T ss_dssp ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHTCSEEEEESSGGGCHHHHHHHHHHHHHHTSE
T ss_pred ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCE
Confidence 247999999999999999999999988 567899999999999999999999999989999
Q ss_pred EEcCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccccccCCCCccc
Q 039172 391 LVCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYDLRPRWPLGEE 444 (477)
Q Consensus 391 l~~Pp~~~ctDNGamIa~ag~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 444 (477)
+++||..+|||||+||||+++++++.|...+ ..++.+.|+|++++.
T Consensus 280 v~~p~~~~~~D~G~~iG~a~~~~~~~g~~~~--------~~~~~~~~~~~~~~~ 325 (334)
T 3eno_A 280 SYLTDREYCMDNGIMIAQAALLMYKSGVRMS--------VEETAVNPRFRIDEV 325 (334)
T ss_dssp EECCCTTTTSCCTHHHHHHHHHHHHTTCCCC--------GGGCCCCTTCCGGGS
T ss_pred EEecCCCCCChHHHHHHHHHHHHHHcCCCCC--------cccCccCCCCChhhc
Confidence 9999999999999999999999999997531 125778999999876
No 2
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=100.00 E-value=4.5e-71 Score=596.85 Aligned_cols=320 Identities=27% Similarity=0.485 Sum_probs=289.0
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+|+|||||||||++++||++++++++++... +.|.+||||+|+.|+++|.+++.++++++|++ ++++|||+||||
T Consensus 5 ~m~iL~i~ts~~~~~~al~~~~~~~~~~~~~---~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id~ia~~ 79 (540)
T 3en9_A 5 PMICLGLEGTAEKTGVGIVTSDGEVLFNKTI---MYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEIDLIAFS 79 (540)
T ss_dssp SCEEEEEECSSSEEEEEEEETTSCEEEEEEE---ECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCCEEEEE
T ss_pred cceEEEEEcCccceEEEEEECCCeEEEEEEE---eecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCcEEEEe
Confidence 5899999999999999999966689988764 46899999999999999999999999999999 999999999999
Q ss_pred cCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccCC
Q 039172 152 IGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLG 231 (477)
Q Consensus 152 ~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~ 231 (477)
.|||++|+||||+++||+||..+++|+++|+||+||++++++ ++++.+| ++++ + |||||+++.+.+ +
T Consensus 80 ~gPG~~~~l~vg~~~ak~la~~~~~p~~~v~h~~aH~~~~~~---~~~~~~p-~~l~----v----sGg~t~~~~~~~-~ 146 (540)
T 3en9_A 80 QGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKL---TTEAEDP-LTLY----V----SGGNTQVIAYVS-K 146 (540)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHHTCCEEEEEHHHHHHHHHHH---HSSCSSC-EEEE----E----CSSCEEEEEEET-T
T ss_pred cCCCchhhHHHHHHHHHHHHHHhCCCeeEeccHHHHHHHHHH---hcCCCCC-cEEE----E----cCCCcEEEEEeC-C
Confidence 999999999999999999999999999999999999999998 4677888 6666 7 999999998875 8
Q ss_pred ceeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhcC
Q 039172 232 QYTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNI 311 (477)
Q Consensus 232 ~~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~ 311 (477)
+|++||+|+|+|+||+|||+|++|||+|| ||++||+||.+|+ ..++||.++. +++|||||+||++.+.+++.
T Consensus 147 ~~~~lg~t~d~s~G~~~D~~a~~lgl~~~--gg~~ie~lA~~g~-~~~~~p~~~~---~~~~sfsgl~~~~~~~~~~~-- 218 (540)
T 3en9_A 147 KYRVFGETLDIAVGNCLDQFARYVNLPHP--GGPYIEELARKGK-KLVDLPYTVK---GMDIAFSGLLTAAMRAYDAG-- 218 (540)
T ss_dssp EEEEEEEBSSSCHHHHHHHHHHHTTCCSS--CHHHHHHHHHTCC-CCCCCCCCEE---TTEECCHHHHHHHHHHHHTT--
T ss_pred ceEEEeeccchHhHHHHHHHHHHcCCCCC--CHHHHHHHHHcCC-ccCcCCCCCC---CcceecHHHHHHHHHHHHcC--
Confidence 99999999999999999999999999998 9999999999998 4577776653 68999999999998887632
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEE
Q 039172 312 DSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQL 391 (477)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l 391 (477)
.+.+|||++||++++++|+++++++++ .++.++||++||||+|++||++|.+.+++.|+++
T Consensus 219 --------------~~~~~ia~~fq~~~~~~l~~~~~~a~~-----~~~~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~ 279 (540)
T 3en9_A 219 --------------ERLEDICYSLQEYAFSMLTEITERALA-----HTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDF 279 (540)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHTCSEEEEESGGGGCHHHHHHHHHHHHHTTCEE
T ss_pred --------------CCHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCeEEEeCcHHhHHHHHHHHHHHHHhcCCEE
Confidence 247899999999999999999999998 5678999999999999999999999999999999
Q ss_pred EcCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCcccccccCCCCccc
Q 039172 392 VCPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDFMYDLRPRWPLGEE 444 (477)
Q Consensus 392 ~~Pp~~~ctDNGamIa~ag~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 444 (477)
++||+.+|||||+||||+|+++++.|...+. .+..+.|+|++++.
T Consensus 280 ~~p~~~~~~Dngamia~~~~~~~~~g~~s~l--------~~~~v~pr~~~dev 324 (540)
T 3en9_A 280 YVPPKEFCGDNGAMIAWLGLLMHKNGRWMSL--------DETKIIPNYRTDMV 324 (540)
T ss_dssp ECCCHHHHSSCHHHHHHHHHHHHHTCCCCCG--------GGCCCCTTCCSTTS
T ss_pred EeCCCcCCCCCHHHHHHHHHHHHHcCCCCcc--------cccccccccccccc
Confidence 9999999999999999999999999876421 13556778877654
No 3
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=100.00 E-value=1.3e-66 Score=530.71 Aligned_cols=319 Identities=31% Similarity=0.530 Sum_probs=284.3
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|+||||||||+++++||++ ||+++++.++++ +++|||++|+.+.++|.+.+.++++++|+++|++++|||+|+|+.
T Consensus 1 M~iLgIdts~~~~~val~~-~g~i~~~~~~~~---~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~ 76 (330)
T 2ivn_A 1 MLALGIEGTAHTLGIGIVS-EDKVLANVFDTL---TTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQ 76 (330)
T ss_dssp CCEEEEECSSSEEEEEEEC-SSCEEEEEEEEC---CCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEE
T ss_pred CEEEEEEccCCCeEEEEEE-CCEEEEEEEEEe---ecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEEC
Confidence 7899999999999999998 568988776654 478899999999999999999999999999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccCCc
Q 039172 153 GPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQ 232 (477)
Q Consensus 153 GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~ 232 (477)
|||+|++||+|+.+||+|+..+++|+++|+||++|++++++ +++++| ++++ + |||||+++.++ .++
T Consensus 77 GPG~~~~lrvg~~~ak~la~~~~~pl~~v~h~~aHa~~a~~----~~~~~~-~~l~----v----~GG~t~~i~~~-~~~ 142 (330)
T 2ivn_A 77 GPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITKM----FGVKDP-VGLY----V----SGGNTQVLALE-GGR 142 (330)
T ss_dssp ESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGGG----GTCCSC-EEEE----E----CSSCEEEEEEE-TTE
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCCEEeeCcHHHHHHHHhh----cCCCCC-eEEE----E----cCCCceEEEEc-CCe
Confidence 99999999999999999999999999999999999999875 355677 4555 5 99999999886 889
Q ss_pred eeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhcCC
Q 039172 233 YTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNID 312 (477)
Q Consensus 233 ~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~ 312 (477)
|+++|+|+|+|+|++||++|++||++++ +|++||+||.+|++ .++||.++. +++|||+|+++++.+.+++.
T Consensus 143 ~~~lg~t~dds~Gr~fD~vA~~LGl~~~--~~~~le~lA~~g~~-~~~~p~~i~---~~~fsfs~l~~~v~~~~~~g--- 213 (330)
T 2ivn_A 143 YRVFGETLDIGIGNAIDVFARELGLGFP--GGPKVEKLAEKGEK-YIELPYAVK---GMDLSFSGLLTEAIRKYRSG--- 213 (330)
T ss_dssp EEEEEEBSSSCHHHHHHHHHHHHTCCSC--HHHHHHHHHHTCCS-CCCCCCCEE---TTEECCHHHHHHHHHHHHHT---
T ss_pred EEEEEeecCchhHHHHHHHHHHhCCCCC--cHHHHHHHhhcCCC-cCCCCcccC---CCeEehHHHHHHHHHHHHcC---
Confidence 9999999999999999999999999987 89999999999876 355665653 47999999999988877542
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEE
Q 039172 313 SRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLV 392 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~ 392 (477)
...++|||++||++++++++++++++.+ .++.++||++||||+|+.||++|.+.+++.|++++
T Consensus 214 ------------~~~~~diAa~fq~~l~~~l~~~~~~~~~-----~~~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~ 276 (330)
T 2ivn_A 214 ------------KYRVEDLAYSFQETAFAALVEVTERAVA-----HTEKDEVVLVGGVAANNRLREMLRIMTEDRGIKFF 276 (330)
T ss_dssp ------------CSCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEE
T ss_pred ------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEE
Confidence 0247999999999999999999999887 56789999999999999999999999988899999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCCc-ccccccCCCCccc
Q 039172 393 CPPPSLCTDNGVMVAWTGIEHFCVGRFDPPPPADDPEDF-MYDLRPRWPLGEE 444 (477)
Q Consensus 393 ~Pp~~~ctDNGamIa~ag~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 444 (477)
+||..+|||||+||||+++++++.|... ++ ++.+.|+|++++.
T Consensus 277 ~p~~~~~~D~G~~iG~a~~~~~~~~~~~---------~~~~~~~~p~~~~~~~ 320 (330)
T 2ivn_A 277 VPPYDLCRDNGAMIAYTGLRMYKAGISF---------RLEETIVKQKFRTDEV 320 (330)
T ss_dssp CCCHHHHSSCHHHHHHHHHHHHHTTCCC---------CGGGGSCCTTCCGGGS
T ss_pred ecCCCCCChhHHHHHHHHHHHHhcCCCC---------CcccCccCCCCCccce
Confidence 9999999999999999999999887642 34 4778999999764
No 4
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=100.00 E-value=1.6e-45 Score=396.93 Aligned_cols=311 Identities=19% Similarity=0.161 Sum_probs=235.4
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
-.|||....||+++||++ ||+|++.+.+++....|...|..|+ .+|++||+++|++++|||+||++.+
T Consensus 11 ~~~g~~~~~HDsaAaLv~-DG~ivaA~eEERftR~Kh~~~~fP~-----------~AI~~cL~~AGi~~~DID~Va~~~~ 78 (576)
T 3ven_A 11 GLNGWPRDFHDASAALLV-DGRIAAFAEEERLTRKKHGYNTAPV-----------QAAAFCLAQAGLTVDDLDAVAFGWD 78 (576)
T ss_dssp EEECCSSSCCCCEEEEEE-TTEEEEEEEHHHHHCCTTCTTSCCH-----------HHHHHHHHHHTCCGGGCSEEEESSC
T ss_pred hhccccccCCCceEEEEE-CCEEEEEEEEEEeeeecccCCCCCH-----------HHHHHHHHHcCCCHHHCcEEEEECC
Confidence 356788888999999999 8999999988774333333343444 3689999999999999999999999
Q ss_pred -CCcchhhHHHHHH-----------HHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeee-ccceeeeeccCC
Q 039172 154 -PGLSLCLRVGVQK-----------ARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLF-NNIHIGQKDTSG 220 (477)
Q Consensus 154 -PG~~t~LrvG~~~-----------Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~ll-DgvyvG~~~SGG 220 (477)
||+..++++|+.. +|.|+...+.|++.|+||.+||+++++ .++++ ++++++ || . ..+
T Consensus 79 ~P~l~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~~~l~~v~HHlaHAaSAf~---~Spfe-~aaVLvvDG--~----Ge~ 148 (576)
T 3ven_A 79 LPAMYRERLGGWPHSDSEALDILLPRDVFPRRTDPPLHFVQHHLAHAASAYY---FSGED-RGAVLIVDG--Q----GEE 148 (576)
T ss_dssp HHHHHHHHSSCCCCCHHHHHHHHSCTTTSCCSSCCCEEECCHHHHHHHHHHT---TSSCS-EEEEEEECS--C----SSS
T ss_pred CccchhhhhhcchhhhhhhhhhhhhHHhcccccCCCeEecCHHHHHHHHhhh---cCCCC-ceEEEEEeC--C----CCC
Confidence 9987766655322 445555568899999999999999998 46776 776666 66 2 113
Q ss_pred ceEEEEEccCCceeEeccc-ccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCc-cccccccccCCCCce------
Q 039172 221 HNLLVLAHNLGQYTQLGTT-IDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAE-SVKFSTPMKQHKDCN------ 292 (477)
Q Consensus 221 ht~lv~v~~~~~~~iLg~t-~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~-~~~fp~p~~~~~~~~------ 292 (477)
||.++...+.+++++++++ .++|+|++||+++++|||+++ |++++|+||+||+|+ .| ++..+..+..++
T Consensus 149 ~T~~v~~~~~~~l~~l~~~~~p~SLG~~Y~~vT~~LGF~~~--gE~KVMGLApYG~p~~~~-~~~l~~~dg~f~~~~~~~ 225 (576)
T 3ven_A 149 ECVTLAHAEGGKITVLDTVPGAWSLGFFYEHVSEYTGLGGD--NPGKLMGLAAHGTTVDET-LSAFAFDSDGYRLNLIDP 225 (576)
T ss_dssp EEEEEEEEETTEEEEEEEEEGGGCHHHHHHHHHHHTTSCTT--CHHHHHHHHTTSCCSCTT-TTTEEEETTEEEETTSCT
T ss_pred ceEEEEEeeCCEEEEEEEeccCChHHHHHHHHHHHcCCCCC--CccceeEEcCCCCCchhh-hHhhccCCCceeeecccc
Confidence 8888988889999999987 899999999999999999965 899999999999985 44 443333222222
Q ss_pred --------eecchHHHHHHHHHHhhcC----C---CCCCCCCC----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 039172 293 --------FSYAGLKTQVRLAIESKNI----D---SRIPISST----SCQDRKSRANIAASFQRVAVLHLEERCERAIEW 353 (477)
Q Consensus 293 --------fSFSGlktav~~~i~~~~~----~---~~~~~~~~----~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~ 353 (477)
|||+|+.......++.... + ...|.... +++..+.+.|||++||+++++.|++++.++++
T Consensus 226 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~R~~~~~~~~~~~~~~~dIAasfQ~~l~~~L~~~~~~a~~- 304 (576)
T 3ven_A 226 QARDPEDWDEYSVTERAWFAHLERIYRLPPNEFVRRYDPAKGRVVRDTRRDPYEYRDLAATAQAALERAVFGLADSVLA- 304 (576)
T ss_dssp TCCCTTSSSSHHHHHHHHHHHHHHHSSSCCCCEEEEEETTTTEEEEEESSCGGGGHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred ccccccccccccccccccccchhcccccchHHHHHHhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 3677764332211221100 0 00011111 22334458999999999999999999999887
Q ss_pred HhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCC-EEEcCCCCCCCcHHHHHHHHHHHHHHcCCC
Q 039172 354 ALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSL-QLVCPPPSLCTDNGVMVAWTGIEHFCVGRF 419 (477)
Q Consensus 354 ~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~-~l~~Pp~~~ctDNGamIa~ag~~~~~~g~~ 419 (477)
.+++++||++||||+|+.||+++.+.+ ++ ++++|| +|||||+|||+|++..++.|..
T Consensus 305 ----~tg~~~l~LaGGVa~N~~L~~~l~~~~---~~~~v~vpp--~~~D~G~aiGqA~~a~~~~g~~ 362 (576)
T 3ven_A 305 ----RTGERTLFVAGGVGLNATMNGKLLTRS---TVDKMFVPP--VASDIGVSLGAAAAVAVELGDR 362 (576)
T ss_dssp ----HHTCSEEEEESGGGGCHHHHHHHHTST---TCSEEECCT--TCSGGGHHHHHHHHHHHHTTCC
T ss_pred ----HcCCCeEEecchHHHHHHHHHHHHHhc---CCCeEEeCC--CCCchHHHHHHHHHHHHHcCCC
Confidence 678999999999999999999987653 44 899987 6999999999999998887753
No 5
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=100.00 E-value=1.9e-33 Score=307.30 Aligned_cols=233 Identities=24% Similarity=0.285 Sum_probs=184.5
Q ss_pred HHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCC---cCcee
Q 039172 129 PVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRM---QNDFL 205 (477)
Q Consensus 129 ~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~---~~P~l 205 (477)
..++...+-.+++ .+.|+++.+|++++. .+|..+++|++.|+||+||+++++. ++++ ..|+|
T Consensus 344 ~~~~~~~~l~~~~---p~~i~~D~HP~y~st---------~~a~~~~~~~~~vQHHhAH~~a~~a---e~~~~~~~~~vl 408 (657)
T 3ttc_A 344 EALRLMQNIYNFT---PQYVVHDAHPGYVSC---------QWASEMNLPTQTVLHHHAHAAACLA---EHQWPLDGGDVI 408 (657)
T ss_dssp HHHHHHHHHTTCC---CSEEEEESCTTCHHH---------HHHTTSCSCEEEECHHHHHHHHHHH---HTTCCTTCCCEE
T ss_pred HHHHHHHHHhCCC---CCEEEEcCCCCchHH---------HHHHHcCCCeEEeeHHHHHHHHHHH---hcCCccCCCCEE
Confidence 3444444445564 589999999999875 2666789999999999999999887 5676 57999
Q ss_pred eee-ccceeeee----ccCCceEEEEEccCCceeEe--------------------------------------------
Q 039172 206 DLF-NNIHIGQK----DTSGHNLLVLAHNLGQYTQL-------------------------------------------- 236 (477)
Q Consensus 206 ~ll-DgvyvG~~----~SGGht~lv~v~~~~~~~iL-------------------------------------------- 236 (477)
.+. || +|+. +|||+..+.. ...|+++
T Consensus 409 g~~~DG--~G~G~Dg~iWGGE~l~~~---~~~~~R~~hl~~~~lpGGd~a~~~p~R~a~~~l~~~~~~~~~~~~~~~~~~ 483 (657)
T 3ttc_A 409 ALTLDG--IGMGENGALWGGECLRVN---YRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPETASVAA 483 (657)
T ss_dssp EEEEEE--EEECGGGCEEEEEEEEEC---SSCEEEEEESCCEECTTGGGGGTCTHHHHHHHHHHHCTTGGGSGGGHHHHH
T ss_pred EEEEeC--CccCCCCCeeeeEEEEEE---CCccEEEeecccCCCCCHHHHHHHHHHHHHHHHHHhccccccchhhhhcCH
Confidence 998 99 8875 7999654432 2223322
Q ss_pred --------------cccccchhhhHHHHHHHHcCCC-----CCCCChh--HHHHhhhcCCCccccccccccCCCCceeec
Q 039172 237 --------------GTTIDDAIGEAFDKTAKWLGLD-----MRRSGGP--AVEKLALEGDAESVKFSTPMKQHKDCNFSY 295 (477)
Q Consensus 237 --------------g~t~D~S~Ge~fDkvAr~LGl~-----~~~~gG~--~iE~LA~~g~~~~~~fp~p~~~~~~~~fSF 295 (477)
+.+..+|+||+||+||++||++ || |++ +||.+|..+++..|+||.++.. .+++|
T Consensus 484 ~~~~~~~~~~~~~~n~~~tSS~GRLFDavAalLGl~~~~~~YE--GqaA~~LEalA~~~~~~~~~lp~~i~~---~~ld~ 558 (657)
T 3ttc_A 484 ANWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYE--GEAACALEALAASCDGVTHPVTMPRVD---NQLDL 558 (657)
T ss_dssp SCTHHHHHHHHTTSSCCEEEEHHHHHHHHHHHHTCSCSSCSST--THHHHHHHHHHHTCCCCCCCCCCCEET---TEECH
T ss_pred HHHHHHHHHHHcCCCCcccCccchHHHHHHHHcCCCCccCccC--chhHHHHHHHHhhCCCccCCceeeccC---CcccH
Confidence 2245799999999999999998 55 665 6899998887666776666642 35666
Q ss_pred chHHHHHHHHHHhhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHH
Q 039172 296 AGLKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKY 375 (477)
Q Consensus 296 SGlktav~~~i~~~~~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~ 375 (477)
+++.. .++++ ..+.+|||++||+++++.|++++.++.+ ++++++|+++||||+|++
T Consensus 559 s~l~~---~ll~~----------------g~~~~dIAasFh~ala~~L~~~~~ra~~-----~~g~~~VvLsGGV~~N~~ 614 (657)
T 3ttc_A 559 ATFWQ---QWLNW----------------QAPVNQRAWAFHDALAQGFAALMREQAT-----MRGITTLVFSGGVIHNRL 614 (657)
T ss_dssp HHHHH---HHHTC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-----TTTCCEEEEESGGGGCHH
T ss_pred HHHHH---HHHHc----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCEEEEECcHHHHHH
Confidence 66643 33331 1348999999999999999999999988 789999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHH
Q 039172 376 VRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIE 412 (477)
Q Consensus 376 Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~ 412 (477)
||++|.+.++ |+++++|+..+|||||+|+|++.+-
T Consensus 615 Lre~L~~~l~--g~~v~~p~~~p~~DnGiaLGQA~~a 649 (657)
T 3ttc_A 615 LRARLAHYLA--DFTLLFPQSLPAGDGGLSLGQGVIA 649 (657)
T ss_dssp HHHHHHHHTT--TSEEECCCSSCSSGGGHHHHHHHHH
T ss_pred HHHHHHHHhC--CCEEEecCCCCCCcHHHHHHHHHHH
Confidence 9999999886 9999999999999999999987654
No 6
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=100.00 E-value=5.5e-33 Score=308.62 Aligned_cols=281 Identities=17% Similarity=0.217 Sum_probs=204.9
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
.||++= +--...+||.. +++.+-+.. .|-. ....-.+.+...++...+-.+++ .+.|+++.+
T Consensus 401 ~vla~G-~~lknt~~l~~-~~~~~~s~h---------iGdl----~~~~~~~~~~~~~~~~~~l~~~~---p~~i~~D~H 462 (761)
T 3vth_A 401 SILAVG-GFYKNTFCMTK-GHYAFISHH---------IGDL----DNEKAFNYYIEQIERYKKLFRVD---PEVVAHDMH 462 (761)
T ss_dssp CEEECC-CSTTBCCEEEE-TTEEEECCC---------CBCC----CSHHHHHHHHHHHHHHHHHTTCC---CSEEEEESC
T ss_pred cEEEeC-hhhcceEEEEE-CCEEEEecC---------ccCC----CCHHHHHHHHHHHHHHHHHhCCC---CCEEEEeCC
Confidence 367662 23345567887 445433221 1221 22222333444555555555664 589999999
Q ss_pred CCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeee-ccceeeee----ccCCceEEEEEc
Q 039172 154 PGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLF-NNIHIGQK----DTSGHNLLVLAH 228 (477)
Q Consensus 154 PG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~ll-DgvyvG~~----~SGGht~lv~v~ 228 (477)
|++++. .||..+++|++.|+||+||+++++. +++++.|++.+. || +|+. +|||+..+..
T Consensus 463 P~y~st---------~~a~~~~~p~~~VQHHhAH~as~ma---e~~~~~~vlg~a~DG--tGyG~dg~iWGGE~l~~~-- 526 (761)
T 3vth_A 463 KGYLST---------QYAKSLDLPKIEVQHHHAHIASCMA---EHNLDEKVIGIAYDG--TGYGTDGNVWGAEILVCD-- 526 (761)
T ss_dssp TTSHHH---------HHHHHSSSCEEEECHHHHHHHHHHH---HTTCCSCEEEEEEEE--EEECTTSSEEEEEEEEEC--
T ss_pred CCchHH---------HHHHhcCCCeEEecHHHHHHHHHHH---hcCCCCceEEEEEeC--CCcCCCCCeeeeEEEEEe--
Confidence 999875 2555679999999999999999987 678888999998 99 8875 7999654432
Q ss_pred cCCceeEe--------------------------------------------------------cccccchhhhHHHHHH
Q 039172 229 NLGQYTQL--------------------------------------------------------GTTIDDAIGEAFDKTA 252 (477)
Q Consensus 229 ~~~~~~iL--------------------------------------------------------g~t~D~S~Ge~fDkvA 252 (477)
...|+++ +.+..+|+||+||+||
T Consensus 527 -~~~~~r~~~l~~~~lpGgd~a~~~p~r~a~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~n~p~tSS~GRLFDavA 605 (761)
T 3vth_A 527 -LKSFERIAHLKYKPLPGNELAIKKIYRTALGFIFDNISFYKNFVEQVDSRELDIILKQIDRKINTAYVSSMGRFFDAVA 605 (761)
T ss_dssp -SSCEEEEEEECCEEEESTTHHHHCHHHHHHHHHGGGGGGGHHHHHHSCHHHHHHHHHHHHHTSSEEEECCHHHHHHHHH
T ss_pred -CCceEEEeccccCCCCChhHHHHHHHHHHHHHHhhhhhhhhhhhhhCCHHHHHHHHHHHHcCCCCCCCCcchhhHHHHH
Confidence 2233322 1245699999999999
Q ss_pred HHcCCC----CCCCChh--HHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhcCCCCCCCCCCcccccC
Q 039172 253 KWLGLD----MRRSGGP--AVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSRIPISSTSCQDRK 326 (477)
Q Consensus 253 r~LGl~----~~~~gG~--~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~~~~~~~~~~~~~~~ 326 (477)
++||++ |+ |++ +||.+|..++ ..|+|+.+ .....+++|+++.+++...+... .
T Consensus 606 alLGl~~~~~YE--GqaA~~LEalA~~~~-~~~p~~i~--~~~~~~ld~~~l~~~~~~~l~~g----------------~ 664 (761)
T 3vth_A 606 ALIGVRKEVLFE--GQAAMELESLMAESE-EYYEYEIL--KEDRYVIDPELILRQIYEDYMKG----------------F 664 (761)
T ss_dssp HHTTSCSSCSST--THHHHHHHHTCCCCC-CCCCCCCE--ESSSEEECHHHHHHHHHHHHHHT----------------C
T ss_pred HHcCCCCCCccc--cchHHHHHHHHhcCC-CCCCceec--CCCcceecHHHHHHHHHHHHHcC----------------C
Confidence 999995 55 655 7899998765 34544333 11223577778777655544321 3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
+++|||++||+++++.|++++.++.+ .+++++|+++||||+|++||++|.+.+++.|+++++|+..+|||||+||
T Consensus 665 ~~~dIAasFq~ala~~L~~~~~~a~~-----~~g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGial 739 (761)
T 3vth_A 665 EKSYISAKFHNTVVNFTYDLANLIRK-----ETGINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISL 739 (761)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-----HHCCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHH
Confidence 47999999999999999999999987 6788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 039172 407 AWTGIEHFC 415 (477)
Q Consensus 407 a~ag~~~~~ 415 (477)
|+|.+-...
T Consensus 740 GQA~~a~~~ 748 (761)
T 3vth_A 740 GQAVIANKI 748 (761)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988665433
No 7
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=100.00 E-value=7.9e-32 Score=300.46 Aligned_cols=349 Identities=16% Similarity=0.135 Sum_probs=220.4
Q ss_pred CccccccccccCCC-CCCccccc-CCCccCCCCccc--ccccCCCCCcEEEEEecccccceEEEEecCCeEEEEeeehhh
Q 039172 30 GLFVRHNRQIIRPT-WSPLRIFS-LPNRHFSSKNFG--QIKMSAKDDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQA 105 (477)
Q Consensus 30 ~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~ 105 (477)
-.|+-|||.|..|. =|.+|... .|...+.+-++. ....+... .+|++-. --...+||.. +++.+-+..
T Consensus 353 D~~L~h~R~I~~~~DDSvv~~~~~~~~~lRr~RG~~P~~~~~~~~~--~~la~G~-~lknt~~l~~-~~~~~~s~h---- 424 (772)
T 4g9i_A 353 DYFLLHNRKILNRADDSVIRFVDGKRAVIRRSRGFVPLPIEIPFEY--NGLAVGA-ELMNAFGVAK-NGKVYPSQY---- 424 (772)
T ss_dssp SBEEEESSCCCSCCCCCEECCCSSSCCBSCCCTTSTTCCEECSSCC--CEEECCC-SSSCCCEEEE-TTEEEECSC----
T ss_pred cEEEECCCCccCccCCceEEEECCeEEEEecCCCCCCCccccCCCC--ceEEech-hHcceEEEEe-CCEEEEccc----
Confidence 47899999998874 23323211 111111111100 01112222 3666522 2234467777 445432211
Q ss_pred hhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHH
Q 039172 106 DLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHME 185 (477)
Q Consensus 106 ~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~ 185 (477)
.|-. ....-.+.+...++...+-.+++ ..+.|+++.+|++.++ .+||+||..+++|+++|+||+
T Consensus 425 -----iGdl----~~~~~~~~~~~~~~~~~~l~~~~--p~~~i~~D~HP~y~st-----~~Ak~lA~~~~iPli~VqHH~ 488 (772)
T 4g9i_A 425 -----IGNT----GKVEVLEFMREAIAHFRKILRVK--NLDLIIADLHPAYNTT-----KLAMEMANELDVELLQVQHHY 488 (772)
T ss_dssp -----CCCS----CSHHHHHHHHHHHHHHHTTSCSS--CSSCEEEESCTTCHHH-----HHHHHHHTTTTCCCCEECSHH
T ss_pred -----cccC----CCHHHHHHHHHHHHHHHHhhCCC--CCCEEEEeCCCCcHHH-----HHHHHHHHhcCCCeeeehHHH
Confidence 1222 12222233334444444444443 3478999999999887 899999999999999999999
Q ss_pred HHHHHHHHhhhhcCCcCceeeee-ccceeeee----ccCCceEEEEEcc---CCceeEecccccchhhhHHHHHHHHcCC
Q 039172 186 AHALVARQWLTMTRMQNDFLDLF-NNIHIGQK----DTSGHNLLVLAHN---LGQYTQLGTTIDDAIGEAFDKTAKWLGL 257 (477)
Q Consensus 186 AHa~sa~~~~~~~~~~~P~l~ll-DgvyvG~~----~SGGht~lv~v~~---~~~~~iLg~t~D~S~Ge~fDkvAr~LGl 257 (477)
||++++++ +++++ +++.+. || .|.. +|||++.+....+ .++++.++.+.||++|+.+|+++..+++
T Consensus 489 AHaaS~~~---esg~~-~~l~LalDG--sG~G~dgtiWgGE~L~~d~~~~eRlg~l~~l~l~ggDaA~~~p~r~a~~ll~ 562 (772)
T 4g9i_A 489 AHIASVMA---EKNLD-SVIGIALDG--VGYGTDGNTWGGEVLYLGYEDVERLAHIDYYPLPGGDLASYYPLRALMGILS 562 (772)
T ss_dssp HHTHHHHH---HTTCC-CCEEEECCS--SEEETTTEEEESEEEECCSSSCEECCCBCCEEESSHHHHHHSTHHHHHHHHT
T ss_pred HHHHHHHH---hcCCC-CeEEEEEEE--eCCCCCCeEeeeEEEEecCcceEEeeeeeecCcccchhhhhhHHHHHHHHHh
Confidence 99999998 46664 555555 99 6653 5788765442221 2345556678899999999999999999
Q ss_pred CCCCCChhHHHHhhhcCCCcccccccccc-----------CCCCc-e-----------eecchHHHH--------H--HH
Q 039172 258 DMRRSGGPAVEKLALEGDAESVKFSTPMK-----------QHKDC-N-----------FSYAGLKTQ--------V--RL 304 (477)
Q Consensus 258 ~~~~~gG~~iE~LA~~g~~~~~~fp~p~~-----------~~~~~-~-----------fSFSGlkta--------v--~~ 304 (477)
.|+ |++.+|.++..+.+..+.++.... ...++ . .++.|+++. + ..
T Consensus 563 ~~~--G~~~i~~~~k~~~~a~~~~~~~~~~e~~~l~~~l~~gin~p~tSS~GRlFDavAallGl~~~~sYEGqaAm~LE~ 640 (772)
T 4g9i_A 563 KVY--SIDELEGVINRCCPKAVESLKYGKVEFNVVLNQLAKGINTAYASSTGRVLDAIAVLLNVAYRRHYEGEPAMKLES 640 (772)
T ss_dssp TTS--CHHHHHHHHTTSCCGGGTTSSSCSHHHHHTHHHHHTTSSCEEEEEHHHHHHHHHHSSSSCCSCCSSSCHHHHHHH
T ss_pred hcC--CchHHHHHHHhcChhhccCcccchHHHHHHHHHHhcCCCCccccccchhhHHHHHHcCCcccccccchhhHHHHH
Confidence 987 888898888777665554433210 00000 0 112222110 0 00
Q ss_pred HHHhhcCCCCCCCCCCc--------------ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchh
Q 039172 305 AIESKNIDSRIPISSTS--------------CQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGV 370 (477)
Q Consensus 305 ~i~~~~~~~~~~~~~~~--------------~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGV 370 (477)
+..........+....+ ......+.|||++||++++++|++++.++.+ ++++++||+||||
T Consensus 641 la~~~~~~~~~~~~~~~~~id~~~l~~~~~~~l~~~~~~dIAasfQ~al~~~L~~~~~~a~~-----~tg~~~VvLSGGV 715 (772)
T 4g9i_A 641 FAFKGKNDLKFEVPVEGELIRVEELFQSILEAIEGASPADIAYSAHLALARAFAHTAVERAR-----EFGVKNVALSGGV 715 (772)
T ss_dssp HHHTCCSCCCCCCCCBTTBBCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHH-----TTTCSCCCEESST
T ss_pred hhhhcccccCCCcCccccccchHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCcCEEEEEchH
Confidence 11111100000000000 0013457899999999999999999999987 7899999999999
Q ss_pred HhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHH--HHHHHH
Q 039172 371 ASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWT--GIEHFC 415 (477)
Q Consensus 371 A~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~a--g~~~~~ 415 (477)
|+|+.||+++.+.+++.|+++|+|+..+|||+|+++|+| |+.+++
T Consensus 716 a~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~ 762 (772)
T 4g9i_A 716 AYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLE 762 (772)
T ss_dssp TCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999865 444554
No 8
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.97 E-value=1.6e-30 Score=256.48 Aligned_cols=256 Identities=14% Similarity=0.224 Sum_probs=196.5
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|++||||-.+..|.+|++|++++|+++...+| |++|+.+++ +++++++++++...+++.+++|.
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~il~~~~~~~--------g~~~e~a~~--------vl~~~~~~a~~~~~~~~~~a~t~ 64 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGEDIVASETISS--------GTGTTGPSR--------VLEKLYGKTGLAREDIKKVVVTG 64 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTEEEEEEEESC--------CTTSSHHHH--------HHHHHHHHHCCCGGGEEEEEEES
T ss_pred CeEEEEEcCccEEEEEEEECCCeEEEEEEecC--------CCCHHHHHH--------HHHHHHHHCCCcchhccccccCc
Confidence 89999995444567999998889998876542 788887654 78899999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccCCc
Q 039172 153 GPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQ 232 (477)
Q Consensus 153 GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~ 232 (477)
+|+. ..+.|++.|||+.||++++++ ..+..++++++ .||++..+.+...+.
T Consensus 65 ~~~~----------------a~~~~~~~Vne~~aha~a~~~---~~~~~~~vl~l----------gG~~~~~~~~~~~g~ 115 (276)
T 4ehu_A 65 YGRM----------------NYSDADKQISELSCHARGVNF---IIPETRTIIDI----------GGQDAKVLKLDNNGR 115 (276)
T ss_dssp TTGG----------------GCCSCSEECCHHHHHHHHHHH---HSTTCCEEEEE----------CSSCEEEEEECTTSC
T ss_pred hHHH----------------HhhCCCcccchHHHHHHHHHH---hCCCCCeEEEE----------cCCCceEEEEEecCc
Confidence 9874 356899999999999999887 34445565543 566666666655565
Q ss_pred ee--EecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhc
Q 039172 233 YT--QLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310 (477)
Q Consensus 233 ~~--iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~ 310 (477)
++ .+|.++|++.|++||++|++||++|+ +++.++..|.. +.++. ..+++|+ ++.+...+.+.
T Consensus 116 ~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~--~~~~~~~~a~~--------~~~i~---~~~~~f~--~s~~~~~~~~~- 179 (276)
T 4ehu_A 116 LLNFLMNDKCAAGTGRFLDVMAKIIEVDVS--ELGSISMNSQN--------EVSIS---STCTVFA--ESEVISHLSEN- 179 (276)
T ss_dssp EEEEEEECSCSTTSHHHHHHHHHHHTCCGG--GHHHHHTTCSS--------CCCCC---CCSHHHH--HHHHHHHHHTT-
T ss_pred eEEEEeCCCcCcchhhHHHHHHHHhccChh--hhHHHHhcCCC--------CCCcC---Cccchhh--hhHHHHhhhcc-
Confidence 55 67999999999999999999999998 66666544432 22443 2344453 67766665432
Q ss_pred CCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCE
Q 039172 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQ 390 (477)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~ 390 (477)
..++|||+++|+++++.+..++.+ ....++|+++|||++|..+|+.|.+.+ |.+
T Consensus 180 ---------------~~~~di~a~~~~~v~~~l~~~~~~--------~~~~~~vvl~GGva~n~~lr~~l~~~~---g~~ 233 (276)
T 4ehu_A 180 ---------------AKIEDIVAGIHTSVAKRVSSLVKR--------IGVQRNVVMVGGVARNSGIVRAMAREI---NTE 233 (276)
T ss_dssp ---------------CCHHHHHHHHHHHHHHHHHHHHHH--------HCCCSSEEEESGGGGCHHHHHHHHHHH---TSC
T ss_pred ---------------ccHHHHHHHHHHHHHHHHHHHHHh--------cccCCeEEEecCccchHHHHHHHHHHH---CCC
Confidence 347999999999999998876544 245788999999999999999998876 678
Q ss_pred EEcCCCCCCCcHHHH-HHHHHHHHHHcC
Q 039172 391 LVCPPPSLCTDNGVM-VAWTGIEHFCVG 417 (477)
Q Consensus 391 l~~Pp~~~ctDNGam-Ia~ag~~~~~~g 417 (477)
+++|+ .|.++++| .|..|++.++..
T Consensus 234 ~~~p~--~p~~~~A~GAAl~A~~~~~~~ 259 (276)
T 4ehu_A 234 IIVPD--IPQLTGALGAALYAFDEAKES 259 (276)
T ss_dssp EECCS--SGGGHHHHHHHHHHHHHHHHH
T ss_pred eeeCC--CcchHHHHHHHHHHHHHHhhc
Confidence 99998 59999997 344577776554
No 9
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=99.93 E-value=1e-25 Score=216.06 Aligned_cols=127 Identities=27% Similarity=0.384 Sum_probs=107.5
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+|+||+|||||+++++||++ ||+++++.. .+.++|++.|.++|+++|+++|++++|||+|+|+
T Consensus 1 ~M~iLaIdTS~~~~svAl~~-~~~~~~~~~----------------~~~~~Hs~~L~p~i~~~L~~a~~~~~dld~Iav~ 63 (213)
T 3r6m_A 1 SAKILAIDTATENCSVALLV-NDQVISRSE----------------VAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFG 63 (213)
T ss_dssp -CCEEEEECSSSEEEEEEES-SSCEEEEEE----------------ECCSCCHHHHHHHHHHHHHTTTCCTTTCSEEEEE
T ss_pred CCEEEEEEccCcceEEEEEE-CCEEEEEEE----------------echHHHHHHHHHHHHHHHHHcCCCHHHccEEEEe
Confidence 38999999999999999998 678877642 3578999999999999999999999999999999
Q ss_pred cCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcC--CcCceeeee-ccceeeeecc
Q 039172 152 IGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTR--MQNDFLDLF-NNIHIGQKDT 218 (477)
Q Consensus 152 ~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~--~~~P~l~ll-DgvyvG~~~S 218 (477)
.|||+|||||||+++||+||..+++|+++|+|+++|+..++. ..+ ...|+++.. +.||.+.|..
T Consensus 64 ~GPGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~~~---~~~~~~v~~~~DARr~evY~~~y~~ 130 (213)
T 3r6m_A 64 RGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYR---LHGATDVAVAIDARMSEVYWARYSR 130 (213)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHHH---HHCCSEEEEEECCSTTCEEEEEEEE
T ss_pred cCCCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhhhh---cCCCcEEEEEEECCCCCeeeeEeec
Confidence 999999999999999999999999999999999999988754 122 223444444 3488877743
No 10
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=99.91 E-value=3.7e-24 Score=207.73 Aligned_cols=122 Identities=27% Similarity=0.378 Sum_probs=104.3
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+||+|||||+++++||++ ||++++.. +.+.++|++.|.++|+++|+++|++++|||+|+|+.|
T Consensus 2 ~iL~idTs~~~~sval~~-~~~~~~~~----------------~~~~~~h~~~l~~~i~~~L~~a~~~~~did~Iav~~G 64 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-NGTINAHF----------------ELCPREHTQRILPMVQEILAASGASLNEIDALAFGRG 64 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-TTEEEEEE----------------EECCSCCHHHHHHHHHHHHHHTTCCGGGCSEEEEECC
T ss_pred eEEEEECCCcCeEEEEEE-CCEEEEEE----------------hhhhHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 699999999999999999 67776532 2567899999999999999999999999999999999
Q ss_pred CCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeecc----ceeeee
Q 039172 154 PGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNN----IHIGQK 216 (477)
Q Consensus 154 PG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDg----vyvG~~ 216 (477)
||+|||||||+++||+|+..+++|+++|+||++|+++++.. .+ ..+++.++|+ +|.+.|
T Consensus 65 PGsftglRig~~~ak~la~~~~~Pl~~V~~l~a~a~~~~~~---~~-~~~v~~~~DArrgevY~a~y 127 (231)
T 2gel_A 65 PGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRK---TG-ATRVLAAIDARMGEVYWAEY 127 (231)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTTCCEEEECHHHHHHHHHHHH---HC-CSEEEEEEEETTTEEEEEEE
T ss_pred CChhHhHHHHHHHHHHHHHHcCCCEEEeccHHHHHHHHhhc---cC-CceEEEEEECCCCcEEEEEE
Confidence 99999999999999999999999999999999999988762 12 2344444433 777665
No 11
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=99.91 E-value=1.1e-24 Score=209.75 Aligned_cols=125 Identities=17% Similarity=0.213 Sum_probs=103.3
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.-+||+|||||+++++||++ +++++ +... .+.++|++.|.++|+++|+++|++++|||+|+|+
T Consensus 11 ~~~iLaidTS~~~~sval~~-~~~~l-~~~~---------------~~~r~Hse~L~p~i~~~L~~a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 11 HHMNVLALDTSQRIRIGLRK-GEDLF-EISY---------------TGEKKHAEILPVVVKKLLDELDLKVKDLDVVGVG 73 (218)
T ss_dssp --CEEEEEECSSSEEEEEEE-TTEEE-EEEE---------------ESCGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred cceEEEEEcCCcCeEEEEEE-CCEEE-EEEe---------------cchHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 34699999999999999999 66777 4321 4679999999999999999999999999999999
Q ss_pred cCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeee-ccceeeeec
Q 039172 152 IGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLF-NNIHIGQKD 217 (477)
Q Consensus 152 ~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~ll-DgvyvG~~~ 217 (477)
.|||+|||||||+++||+||..+++|+++|+|+++|++... ..+...|+++.. +.||.+.|.
T Consensus 74 ~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~l~a~a~~~~----~~~~v~~~iDARr~eVY~a~y~ 136 (218)
T 2a6a_A 74 IGPGGLTGLRVGIATVVGLVSPYDIPVAPLNSFEMTAKSCP----ADGVVLVARRARKGYHYCAVYL 136 (218)
T ss_dssp CCSSCHHHHHHHHHHHHHHHGGGTCCEEEECHHHHHHHTCS----SCEEEEEEEECSTTEEEEEEEE
T ss_pred cCCCchHhHHHHHHHHHHHHHHcCCCEEEeCcHHHHHhhcc----cCCcEEEEEECCCCcEEEEEEe
Confidence 99999999999999999999999999999999999986532 011223444444 448887763
No 12
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.66 E-value=2.4e-14 Score=141.41 Aligned_cols=235 Identities=17% Similarity=0.298 Sum_probs=159.0
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|++||||..+..+.++|+|++|++++.... +++| .|.. .+..+++++.+ +++...+|+.|++|
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~g~i~~~~~~-------~~~~-~~~~-------~~~~~l~~l~~-~~~~~~~i~~i~~T- 65 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKEIVAKSLV-------AVGT-GTSG-------PARSISEVLEN-AHMKKEDMAFTLAT- 65 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEE-------ECCS-SCCH-------HHHHHHHHHHH-HTCCGGGCSEEEEE-
T ss_pred cEEEEEEeccceEEEEEEeCCCCEEEEEEe-------cCCC-CHHH-------HHHHHHHHHHH-cCCChhHEEEEEEe-
Confidence 678999999999999999988999887532 2233 4542 23345555543 46667788999886
Q ss_pred CCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccCCc
Q 039172 153 GPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQ 232 (477)
Q Consensus 153 GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~ 232 (477)
|-|- .+ +.. +..| .++|..||+..+.+. ..+ ...+ + ++ .|+++.++.++ .+.
T Consensus 66 G~g~--~~---------~~~-~~~~--~v~Ei~ah~~ga~~~--~~~--~~~v--i---di----GGqd~k~i~~~-~g~ 117 (270)
T 1hux_A 66 GYGR--NS---------LEG-IADK--QMSELSCHAMGASFI--WPN--VHTV--I---DI----GGQDVKVIHVE-NGT 117 (270)
T ss_dssp STTT--TT---------TTT-TCSE--EECHHHHHHHHHHHH--CTT--CCEE--E---EE----ETTEEEEEEEE-TTE
T ss_pred Cccc--cc---------hhh-cCCC--CcccHHHHHHHHHHh--CCC--CCEE--E---EE----CCCceEEEEEe-CCc
Confidence 3331 10 111 3344 489999999877652 121 1222 2 24 67788888885 454
Q ss_pred ee--EecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhc
Q 039172 233 YT--QLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKN 310 (477)
Q Consensus 233 ~~--iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~ 310 (477)
+. .++..+....|.++|.+|+.||++++ .++++|..++. |.++. ..|. .|. ++.+..++.+.
T Consensus 118 v~~~~mn~~ca~GtG~~le~~a~~lg~~~~-----el~~la~~~~~-----p~~~~--~~c~-vfa--~s~v~~l~~~g- 181 (270)
T 1hux_A 118 MTNFQMNDKCAAGTGRFLDVMANILEVKVS-----DLAELGAKSTK-----RVAIS--STCT-VFA--ESEVISQLSKG- 181 (270)
T ss_dssp EEEEEEESSCCTTSHHHHHHHHHHHTCCTT-----THHHHHTTCCS-----CCCCC--CCSH-HHH--HHHHHHHHHTT-
T ss_pred eeeeccccccchhhHHHHHHHHHHhCCCHH-----HHHHHHhhCCC-----CCCcc--cccc-hhH--hHHHHHHhhCC-
Confidence 32 46777888899999999999999875 67888876431 22332 2343 242 67776665432
Q ss_pred CCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CcEEEEEchhHhhHHHHHHHHHHHHcCCC
Q 039172 311 IDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPS-IKHLVVSGGVASNKYVRARLDRAVKNNSL 389 (477)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~-~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~ 389 (477)
..++||++++.+.++..+.+.+ + ..+ .+.|+++||++.|..+++.+.+.+ +.
T Consensus 182 ---------------~~~~di~~av~e~Va~~i~~~~----~-----~~~~~~~i~~~GG~a~n~~~~~~~~~~l---g~ 234 (270)
T 1hux_A 182 ---------------TDKIDIIAGIHRSVASRVIGLA----N-----RVGIVKDVVMTGGVAQNYGVRGALEEGL---GV 234 (270)
T ss_dssp ---------------CCHHHHHHHHHHHHHHHHHHHH----H-----TTCCCSSEEEESGGGGCHHHHHHHHHHH---CS
T ss_pred ---------------CCHHHHHHHHHHHHHHHHHHHH----h-----cCCCCCeEEEeCccccCHHHHHHHHHHH---CC
Confidence 2479999999999988875432 2 223 367999999999999999998887 56
Q ss_pred EEEcCC
Q 039172 390 QLVCPP 395 (477)
Q Consensus 390 ~l~~Pp 395 (477)
++++|+
T Consensus 235 ~v~~p~ 240 (270)
T 1hux_A 235 EIKTSP 240 (270)
T ss_dssp CEECCG
T ss_pred CeEeCC
Confidence 788876
No 13
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=99.54 E-value=1.1e-12 Score=131.00 Aligned_cols=245 Identities=11% Similarity=0.106 Sum_probs=162.6
Q ss_pred CCCcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEE
Q 039172 70 KDDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVA 149 (477)
Q Consensus 70 ~~~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IA 149 (477)
+.+++.+|||..+..+.+++++ ++++++....+ . . ++++++.. +.+|++.|+
T Consensus 17 ~~~~~~iGIDiGsTt~K~V~~~-~~~i~~~~~~~--------------~-------~----~~~~l~~l--~~~~~~~i~ 68 (287)
T 2ews_A 17 RGSHMKVGIDAGGTLIKIVQEQ-DNQRTFKTELT--------------K-------N----IDQVVEWL--NQQQIEKLC 68 (287)
T ss_dssp ----CEEEEEECSSEEEEEEEC-SSCEEEEEEEG--------------G-------G----HHHHHHHH--HTSCCSEEE
T ss_pred CCCCeEEEEEEChhhEEEEEEc-CCEEEEEEech--------------H-------H----HHHHHHHh--cccCceEEE
Confidence 4567899999999999999996 67887664321 1 1 22223222 235788888
Q ss_pred EecCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhc-CCcCceeeeeccceeeeeccCCceEEEEEc
Q 039172 150 VTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMT-RMQNDFLDLFNNIHIGQKDTSGHNLLVLAH 228 (477)
Q Consensus 150 vt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~-~~~~P~l~llDgvyvG~~~SGGht~lv~v~ 228 (477)
+| |=| +..++..+++|+..++.+.||+..+.+..... ...+|++.+= + ||.+.++.++
T Consensus 69 ~T-G~G-----------~~~~~~~l~~~~~~v~Ei~~~~~Ga~~l~~~~~~~~~~~~vId----I-----Gg~dsii~v~ 127 (287)
T 2ews_A 69 LT-GGN-----------AGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFAN----V-----GTGTSLHYFD 127 (287)
T ss_dssp EE-STT-----------HHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTTCCCSCEEEEE----E-----SSSEEEEEEC
T ss_pred EE-Chh-----------HHhHhHhhCCCcceeehhHHHHHHHHHhcccCCCCcCCeEEEE----e-----CCCeEEEEEc
Confidence 87 434 12344567899999999999999887631110 0124765443 4 4444477777
Q ss_pred cCCceeEecccccchhhhHHHHHHHHcCC-CCCCCChhHHHHhhhcCCCcccccc---------ccccCCCCceeecchH
Q 039172 229 NLGQYTQLGTTIDDAIGEAFDKTAKWLGL-DMRRSGGPAVEKLALEGDAESVKFS---------TPMKQHKDCNFSYAGL 298 (477)
Q Consensus 229 ~~~~~~iLg~t~D~S~Ge~fDkvAr~LGl-~~~~~gG~~iE~LA~~g~~~~~~fp---------~p~~~~~~~~fSFSGl 298 (477)
.++|+..+.+.--. |.++|.++.+||. +++ .+..||..|+...+++. .|+.....|. +|.
T Consensus 128 -~~~f~r~~g~aaGg-GtFl~l~a~ll~~~~~~-----el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as-~Fg-- 197 (287)
T 2ews_A 128 -GQSQRRVGGIGTGG-GMIQGLGYLLSQITDYK-----QLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAA-NFG-- 197 (287)
T ss_dssp -SSCEEEEEEESCSH-HHHHHHHHHHHCCCCHH-----HHHHHHTTCCCTTTCEETTTC-------CCTTSEEE-TTT--
T ss_pred -CCceEEcCccccch-hhHHHHHHHHhCCCCHH-----HHHHHHHcCCccccccchhhhcCCCCCCcCcchhhH-HHH--
Confidence 56899888877766 9999999999995 664 66678988875422210 0111111122 243
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEch-hHhhHHHH
Q 039172 299 KTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGG-VASNKYVR 377 (477)
Q Consensus 299 ktav~~~i~~~~~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGG-VA~N~~Lr 377 (477)
|+ ..++. ...+++|||+++..++.+.+...+....+ ..++++|+++|| |+.|..++
T Consensus 198 k~--~~l~~----------------~g~~~eDIaasl~~sV~~~I~~la~~~a~-----~~~i~~Vvf~Gg~l~~n~~l~ 254 (287)
T 2ews_A 198 HV--LHHLD----------------ADFTPSNKLAAVIGVVGEVVTTMAITVAR-----EFKTENIVYIGSSFHNNALLR 254 (287)
T ss_dssp TG--GGCTT----------------SCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HTTCCEEEEESGGGTTCHHHH
T ss_pred HH--HHHHh----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCeEEEeCCchhcCHHHH
Confidence 21 11110 12458999999999999888877665444 457789999999 99999999
Q ss_pred HHHHHHHHcCCCEEEcCCC
Q 039172 378 ARLDRAVKNNSLQLVCPPP 396 (477)
Q Consensus 378 ~~L~~~~~~~g~~l~~Pp~ 396 (477)
+.|.+.....+.++++|+.
T Consensus 255 ~~l~~~~~~~~~~~~~p~~ 273 (287)
T 2ews_A 255 KVVEDYTVLRGCKPYYVEN 273 (287)
T ss_dssp HHHHHHHHHTTCEEEECTT
T ss_pred HHHHHHHhhCCceEEECCC
Confidence 9999987777899999974
No 14
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=98.76 E-value=3.7e-07 Score=93.53 Aligned_cols=218 Identities=12% Similarity=0.080 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhc--------
Q 039172 127 IDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMT-------- 198 (477)
Q Consensus 127 l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~-------- 198 (477)
+..+++.+ ++.++. .+++.|++|- =|.+- +...+...+++++.-+..+++|+..+.+.....
T Consensus 84 ~~~~l~~~-~~~~~~-~~~~~i~aTG-gGa~k-------~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~ 153 (360)
T 2i7n_A 84 MHRFIQMG-SEKNFS-SLHTTLCATG-GGAFK-------FEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECY 153 (360)
T ss_dssp HHHHHHHC--------------CEES-TTTTG-------GGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEE
T ss_pred HHHHHHHH-HHcCCC-ccCcEEEEEC-CcHHH-------HHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeE
Confidence 33344333 333554 3456677763 34221 112233346778888999999999877632100
Q ss_pred ------------------CCcCceeeeeccceeeeeccCCceEEEEEccCCceeEecccccchhhhHHHHHHHHcC-CCC
Q 039172 199 ------------------RMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEAFDKTAKWLG-LDM 259 (477)
Q Consensus 199 ------------------~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~~~iLg~t~D~S~Ge~fDkvAr~LG-l~~ 259 (477)
.-.+|+|.+= + |+-+.++.+++.++|+.++.+ ...-|.++.-++.++| ..+
T Consensus 154 t~~~~~~~~~~~~~~~~~~~~~PyllVn----I-----GsGvSiikv~~~~~f~rvgG~-siGGGTflGL~~lLtg~~~~ 223 (360)
T 2i7n_A 154 YFENPTNPELCQKKPYCLDNPYPMLLVN----M-----GSGVSILAVYSKDNYKRVTGT-SLGGGTFLGLCCLLTGCETF 223 (360)
T ss_dssp EEESTTCTTTCEEEEECCSSCCSEEEEE----E-----SSSEEEEEEEETTEEEEEEEE-SCSHHHHHHHHHHHHCCCSH
T ss_pred EeccccccccccccccccccCCceEEEE----e-----CCCcEEEEEcCCCCEEEeccc-cCccHhHHHHHHHHhCCCCH
Confidence 1126777654 4 544678888888899998764 4566899998886665 445
Q ss_pred CCCChhHHHHhhhcCCCcccc-------------ccccccCCCCceeecchHHHHHHHHHHhhcCCCCCCCCCCcccccC
Q 039172 260 RRSGGPAVEKLALEGDAESVK-------------FSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSRIPISSTSCQDRK 326 (477)
Q Consensus 260 ~~~gG~~iE~LA~~g~~~~~~-------------fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~~~~~~~~~~~~~~~ 326 (477)
+ .+-.||.+|+...++ +..|. + -.--||.-+ ....+. ...
T Consensus 224 d-----El~~lA~~Gd~~~vDllV~DIYg~~y~~~gL~~--~-~~ASsFGk~----~~~~~~---------------~~~ 276 (360)
T 2i7n_A 224 E-----EALEMAAKGDSTNVDKLVKDIYGGDYERFGLQG--S-AVASSFGNM----MSKEKR---------------DSI 276 (360)
T ss_dssp H-----HHHHHHHHCCGGGTSEEHHHHHSSCBGGGTBCT--T-SEEETTTTT----TSHHHH---------------TTC
T ss_pred H-----HHHHHHHcCCCCcccceeeecccCcccccCCCc--c-ceeehhhhH----hhHhhh---------------cCC
Confidence 4 666799889874322 11221 1 122245322 111111 123
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEch-hHhhHHHHHHHHHHHH---cCCCEEEcCCC
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGG-VASNKYVRARLDRAVK---NNSLQLVCPPP 396 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGG-VA~N~~Lr~~L~~~~~---~~g~~l~~Pp~ 396 (477)
+++|||++++.++++.+...+....+ ..++++|+++|| |+.|..+++.|.+.+. +.+.++++|+.
T Consensus 277 ~~eDIa~gll~sVa~~I~~lA~l~A~-----~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~ 345 (360)
T 2i7n_A 277 SKEDLARATLVTITNNIGSIARMCAL-----NENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEH 345 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-----HHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCC
Confidence 58999999999999998877644333 346778999999 9999999999998875 24678888863
No 15
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.08 E-value=0.00058 Score=67.61 Aligned_cols=109 Identities=15% Similarity=0.167 Sum_probs=76.8
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
++||||-..+.+.++++|.+|+++......- ..+ .....-.+.+...+++++++.+++..++.+|+++.
T Consensus 7 ~~lgiDiggt~~~~~l~d~~g~il~~~~~~~----~~~------~~~~~~~~~l~~~i~~~~~~~~~~~~~i~~igi~~- 75 (326)
T 2qm1_A 7 KIIGIDLGGTTIKFAILTTDGVVQQKWSIET----NIL------EDGKHIVPSIIESIRHRIDLYNMKKEDFVGIGMGT- 75 (326)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEEC----CCT------TTTTTHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-
T ss_pred EEEEEEECCCEEEEEEECCCCCEEEEEEEcC----CCC------CCHHHHHHHHHHHHHHHHHHcCCCccceeEEEEec-
Confidence 7999999999999999998899887654321 000 11122345677788999999888778899998875
Q ss_pred CCcch---hh-H-------HHH-HHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 154 PGLSL---CL-R-------VGV-QKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 154 PG~~t---~L-r-------vG~-~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
||.+. +. . .+. .+.+.|...+++|++-.|...+.+++-+.
T Consensus 76 pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~ 127 (326)
T 2qm1_A 76 PGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERW 127 (326)
T ss_dssp SSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred ccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHH
Confidence 66531 11 0 123 55677888889999888888877766543
No 16
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=97.92 E-value=0.00091 Score=68.59 Aligned_cols=287 Identities=17% Similarity=0.188 Sum_probs=147.8
Q ss_pred cEEEEEec--ccccceEEEEecCC--eEEEEeeehh-----hhhhhhcC-C-ccchhc---HHHHHHhHHHHHHHHHHHC
Q 039172 73 LIILGIET--SCDDTAAAVVRGNG--EILSQVVSSQ-----ADLLAKYG-G-VAPKMA---EEAHSLAIDPVVQEALHKA 138 (477)
Q Consensus 73 m~iLgIeT--S~ddtsvAlv~~dg--~il~~~~~sq-----~~~h~~~g-G-v~P~~a---~~~H~~~l~~~i~~~L~~a 138 (477)
|+++|+-| |-|-.=+|+++-++ +++......- ..+..-.. + .-++.. ...-.+....+++++|+++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~~~~~l~~~~~~py~~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~l~~~ 81 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGPDEIARAAEVEQRWVALAAQGVRELLLQQ 81 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEESSSEEEEEEEEEECCHHHHHHHHHTTSCCBTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEecccChhhhhEEEEEecCCceecceeeecCCHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 67888876 55666677776544 4544332110 01111111 1 111111 1111233457899999999
Q ss_pred CCCCCCcCEEEEe-----cCCCcchhhHHHHHHHHHHHhhcC------------------CCEEEeccHHHHHHHHHHhh
Q 039172 139 NLTERDLSAVAVT-----IGPGLSLCLRVGVQKARKIAGQFN------------------LPIVGVHHMEAHALVARQWL 195 (477)
Q Consensus 139 gi~~~did~IAvt-----~GPG~~t~LrvG~~~Ak~La~~~~------------------~Pli~V~H~~AHa~sa~~~~ 195 (477)
++++++||+|++- .-|+.-..+.+|-. ..||...+ .|++++-|.. .+
T Consensus 82 ~~~~~~Id~IGsHGQTv~H~P~~~~TlQiGd~--~~iA~~Tgi~vV~DFR~~DvAaGGQGAPLvP~~h~~------lf-- 151 (371)
T 3qbx_A 82 QMSPDEVRAIGSHGQTIRHEPARHFTVQIGNP--ALLAELTGIDVVADFRRRDVAAGGQGAPLVPAFHQA------LF-- 151 (371)
T ss_dssp TCCGGGCCEEEECCEEEEEEGGGTEEEEECCH--HHHHHHHSSCEEECCSHHHHHTTSCCCCCCHHHHHH------HH--
T ss_pred CCCcccccEEEeCCccCccCCCCCCeeecCCH--HHHHHHHCcCEEeeChHHHHhccCCCCCcchHHHHH------Hh--
Confidence 9999999999852 12432223333322 22444444 4555543321 11
Q ss_pred hhcCCcCceeeeeccceeeeeccCCceEEEEEccCCceeEecccccchhhhH-HHHHHH-HcCCCCCCCChhHHHHhhhc
Q 039172 196 TMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLGQYTQLGTTIDDAIGEA-FDKTAK-WLGLDMRRSGGPAVEKLALE 273 (477)
Q Consensus 196 ~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~~~~iLg~t~D~S~Ge~-fDkvAr-~LGl~~~~~gG~~iE~LA~~ 273 (477)
.....+.+++= .||-.-+.+....+ .++ -+|...|.+ .|...+ ..|..|.. +| ++|..
T Consensus 152 --~~~~~~r~~lN---------IGGIaNiT~l~~~~--~v~--afDtGPgN~liD~~~~~~~~~~yD~-dG----~~A~~ 211 (371)
T 3qbx_A 152 --GDDDTSRAVLN---------IGGFSNVSLLSPGK--PVR--GFDCGPGNVLMDAWIHHQRGEHFDR-DG----AWAAS 211 (371)
T ss_dssp --C----CEEEEE---------ESSEEEEEEECTTS--CCE--EEEEEESSHHHHHHHHHHHCCSSCG-GG----HHHHT
T ss_pred --CCCCCceEEEe---------cCCceEEEEeCCCC--CEE--EEecCccHHHHHHHHHHHhCCCccc-Cc----chhcC
Confidence 11122333322 46644344433222 222 358888875 566655 77888873 22 25666
Q ss_pred CCCc-----------cccccccccCCCCceeecchHHHHHHHHHHhhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHH
Q 039172 274 GDAE-----------SVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRVAVLH 342 (477)
Q Consensus 274 g~~~-----------~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~ 342 (477)
|+.+ .|..|.|.+. ..-.|. ...+...++... ....+|+.|.+-+-.+..
T Consensus 212 G~v~~~lL~~ll~~pyf~~~pPKSt-GRE~F~----~~~l~~~l~~~~--------------~ls~~Dv~ATLt~~TA~s 272 (371)
T 3qbx_A 212 GQVNHALLASLLADEFFAARGPKST-GRERFN----LPWLQEHLARHP--------------ALPAADIQATLLELSARS 272 (371)
T ss_dssp SCCCHHHHHHHHTSHHHHCCSSCCC-CTTTSS----HHHHHHHC-------------------CCHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHhcCchhcCCCCCcc-CHHHhC----HHHHHHHHHhcc--------------CCCHHHHHHHHHHHHHHH
Confidence 6432 2344545432 222443 122222332110 124688877776666666
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCC-CCCCc--HHHHHHHHHHHHHHcCC
Q 039172 343 LEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPP-SLCTD--NGVMVAWTGIEHFCVGR 418 (477)
Q Consensus 343 L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~-~~ctD--NGamIa~ag~~~~~~g~ 418 (477)
+++-+++. ....++|+++||=+-|..|.++|++.+. +.+|..... -...| -+++.||.|++.+. |.
T Consensus 273 Ia~~~~~~-------~~~~~~v~vcGGGa~N~~Lm~~L~~~l~--~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l~-g~ 341 (371)
T 3qbx_A 273 ISESLLDA-------QPDCEEVLVCGGGAFNTALMKRLAMLMP--EARVASTDEYGIPPAWMEGMAFAWLAHRFLE-RL 341 (371)
T ss_dssp HHHHHHHH-------CTTCCEEEEESGGGGCHHHHHHHHHHCT--TSEEEEGGGGTCCTTTHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHhc-------cCCCceEEEECCccCcHHHHHHHHHhCC--CCEEeCHHHcCCChhHHHHHHHHHHHHHHHc-CC
Confidence 65544331 1235789999999999999999998763 456654432 11223 26777899988875 44
No 17
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=97.75 E-value=0.0039 Score=62.33 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=69.0
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+|++||||-..+.+.++++|.+|+++...... .|......-.+.+..++++++++.+ .+.+|+++
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~-----------~~~~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~ 87 (327)
T 4db3_A 23 NAMYYGFDVGGTKIEFGAFNEKLERVATERVP-----------TPTDDYPLLLETIAGLVAKYDQEFA----CEGKIGLG 87 (327)
T ss_dssp SCCEEEEEECSSEEEEEEECTTCCEEEEEEEE-----------CCTTCHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred CcEEEEEEECCCEEEEEEEeCCCcEEEEEEec-----------CCCCCHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 34689999999999999999899988765432 1111223344556667777776543 36677776
Q ss_pred cCCCcch---h------h--HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHH
Q 039172 152 IGPGLSL---C------L--RVGVQKARKIAGQFNLPIVGVHHMEAHALVAR 192 (477)
Q Consensus 152 ~GPG~~t---~------L--rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~ 192 (477)
. ||.+. + + --++.+.+.|...+++|++-.|-..+-+++-+
T Consensus 88 ~-pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~ 138 (327)
T 4db3_A 88 L-PGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEA 138 (327)
T ss_dssp E-SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHH
T ss_pred e-eccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHH
Confidence 4 55432 1 0 12345677788889999988887777666544
No 18
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.64 E-value=0.017 Score=56.23 Aligned_cols=97 Identities=19% Similarity=0.271 Sum_probs=66.2
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|++||||-..+.+.++++|.+|+++...... .| . -.+.+...+.+++++ .++.+|+++.
T Consensus 4 m~~lgidiggt~i~~~l~d~~g~il~~~~~~-----------~~-~----~~~~~~~~i~~~i~~-----~~i~gigi~~ 62 (292)
T 2gup_A 4 MTIATIDIGGTGIKFASLTPDGKILDKTSIS-----------TP-E----NLEDLLAWLDQRLSE-----QDYSGIAMSV 62 (292)
T ss_dssp CCEEEEEEETTEEEEEEECTTCCEEEEEEEC-----------CC-S----SHHHHHHHHHHHHTT-----SCCSEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEEe-----------CC-C----CHHHHHHHHHHHHHh-----CCCcEEEEEe
Confidence 5699999999999999999889988765321 01 1 123345556666664 5788888875
Q ss_pred CCCcch---h-------hH--HHHHHHHHHHhhcCCCEEEeccHHHHHHHHH
Q 039172 153 GPGLSL---C-------LR--VGVQKARKIAGQFNLPIVGVHHMEAHALVAR 192 (477)
Q Consensus 153 GPG~~t---~-------Lr--vG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~ 192 (477)
||.+. + +. -++.+.+.| ..+++|++-.|...+.+++.+
T Consensus 63 -pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~ 112 (292)
T 2gup_A 63 -PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSEL 112 (292)
T ss_dssp -SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHH
T ss_pred -cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHH
Confidence 55432 1 10 134567788 889999988888877766544
No 19
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.61 E-value=0.008 Score=62.29 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=78.5
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
..++||||-..+.+.++++|.+|+++......- |......-.+.+...+++++++.++...++.+|+++
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~ 175 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDI-----------HEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAIT 175 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEEC-----------CCCBHHHHHHHHHHHHHHHHHHTTTTCCEEEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcC-----------CCCCHHHHHHHHHHHHHHHHHhcCCCcCceEEEEEe
Confidence 457999999999999999998999987654321 111233345677788999999988877788888877
Q ss_pred cCCCcch---hhH--------HHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 152 IGPGLSL---CLR--------VGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 152 ~GPG~~t---~Lr--------vG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
. ||.+. +.- -++.+++.|...+++|++-.|-..+-+++-+.
T Consensus 176 ~-pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~ 227 (429)
T 1z05_A 176 L-PGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKL 227 (429)
T ss_dssp E-SSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred c-cCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHH
Confidence 3 55432 110 12456677888889999988888877766543
No 20
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.59 E-value=0.011 Score=57.33 Aligned_cols=103 Identities=18% Similarity=0.252 Sum_probs=63.6
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|++||||-..+.+.++++|.+|+++......- |.... .+.+...+.+++++. .++++.|++..
T Consensus 1 m~~lgidiggt~~~~~l~d~~g~il~~~~~~~-----------~~~~~---~~~~~~~i~~~i~~~---~~~~~~igi~~ 63 (289)
T 2aa4_A 1 MTTLAIDIGGTKLAAALIGADGQIRDRRELPT-----------PASQT---PEALRDALSALVSPL---QAHAQRVAIAS 63 (289)
T ss_dssp CCEEEEEECSSEEEEEEECTTCCEEEEEEEEC-----------CSSCC---HHHHHHHHHHHHTTT---GGGCSEEEEEE
T ss_pred CeEEEEEeCCCEEEEEEECCCCCEEEEEEecC-----------CCCCC---HHHHHHHHHHHHHHH---HhhCCEEEEEe
Confidence 57899999999999999998899887654320 00000 122333344444332 12356777765
Q ss_pred CCCcch----------hh--HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 153 GPGLSL----------CL--RVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 153 GPG~~t----------~L--rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
||.+. .+ --++.+.+.|...+++|++-.|...+.+++.+.
T Consensus 64 -pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~ 115 (289)
T 2aa4_A 64 -TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQ 115 (289)
T ss_dssp -SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred -ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHH
Confidence 55421 11 113446777888889999888888887776544
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.58 E-value=0.046 Score=52.31 Aligned_cols=240 Identities=12% Similarity=0.063 Sum_probs=125.1
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.+++|||-.+..+.+.+++.+++++........- -+ .|++-. ...-.+.+..+++.+....+.. +..++++
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~~~--l~-~g~i~d--~~~~~~~l~~~~~~~~~~~~~~---~~~~v~t- 98 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEGIPVAGALKWASV--VK-DGLVVD--YIGAIQIVRELKAKVERLLGSE---LFQAATA- 98 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTCCEEEEEEEECCC--CB-TTBCTT--HHHHHHHHHHHHHHHHHHSSSC---CCEEEEE-
T ss_pred CEEEEEEcccceEEEEEECCCCcEEEEEeecccc--cC-CCEEEc--HHHHHHHHHHHHHHHHHhcCCc---cCeEEEE-
Confidence 4689999999999999988777777654321100 01 122211 1122233344555555555653 3444444
Q ss_pred CCCcchhhHHHHHHHHHHHhhcCCCEEEe-ccHHHHHHHHHHhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccCC
Q 039172 153 GPGLSLCLRVGVQKARKIAGQFNLPIVGV-HHMEAHALVARQWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNLG 231 (477)
Q Consensus 153 GPG~~t~LrvG~~~Ak~La~~~~~Pli~V-~H~~AHa~sa~~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~~ 231 (477)
-|..++.- .-.+.+......++++..+ ..-+|++.+ + +... . .++| + .||.|.+..+.+ +
T Consensus 99 vp~~~~~~--~~~~~~~~~~~~g~~~~~i~~e~~A~a~~--~-----~~~~-~-~viD---i----Gggst~~~~~~~-g 159 (272)
T 3h1q_A 99 IPPGTVGR--NAEACGHVVAGAGLELVTLVDEPVAAARA--L-----GIND-G-IVVD---I----GGGTTGIAVIEK-G 159 (272)
T ss_dssp CCSCC-----CTTHHHHHHHHTTCEEEEEECHHHHHHHH--H-----TCSS-E-EEEE---E----CSSCEEEEEEET-T
T ss_pred cCCCCCHH--HHHHHHHHHHHcCCeeeecccHHHHHHHH--H-----cCCC-E-EEEE---E----CCCcEEEEEEEC-C
Confidence 44433321 1123444556678876554 445555433 2 1111 1 2222 4 567777766653 3
Q ss_pred ceeEecccccchhhhHHHHHHHHcCCCCCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhcC
Q 039172 232 QYTQLGTTIDDAIGEAFDKTAKWLGLDMRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNI 311 (477)
Q Consensus 232 ~~~iLg~t~D~S~Ge~fDkvAr~LGl~~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~ 311 (477)
... ....++...+++-+.+++.|+++.+ ..|++... + + + ..
T Consensus 160 ~~~-~~~~~~~Gg~~~~~~l~~~l~~~~~-----~ae~~k~~-------~------------~-~--~~----------- 200 (272)
T 3h1q_A 160 KIT-ATFDEPTGGTHLSLVLAGSYKIPFE-----EAETIKKD-------F------------S-R--HR----------- 200 (272)
T ss_dssp EEE-EECCBSCCHHHHHHHHHHHHTCCHH-----HHHHHHHS-------S------------T-T--HH-----------
T ss_pred EEE-EEecCCCcHHHHHHHHHHHhCCCHH-----HHHHHHHh-------c------------C-C--HH-----------
Confidence 332 3345566656666667777765432 22222111 0 0 0 00
Q ss_pred CCCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CcEEEEEchhHhhHHHHHHHHHHHHcCCCE
Q 039172 312 DSRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPS-IKHLVVSGGVASNKYVRARLDRAVKNNSLQ 390 (477)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~-~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~ 390 (477)
...+++..+ .+.+.+.+.+.++ ..+ ++.|+++||.+.+..+++.|.+.+ +.+
T Consensus 201 ---------------~~~~~~~~~----~~~i~~~i~~~l~-----~~~~~~~ivL~GG~a~~~~l~~~l~~~l---~~~ 253 (272)
T 3h1q_A 201 ---------------EIMRVVRPV----IEKMALIVKEVIK-----NYDQTLPVYVVGGTAYLTGFSEEFSRFL---GKE 253 (272)
T ss_dssp ---------------HHHHHHHHH----HHHHHHHHHHHTT-----TSCSSCCEEEESGGGGSTTHHHHHHHHH---SSC
T ss_pred ---------------HHHHHHHHH----HHHHHHHHHHHHH-----hcCCCCEEEEECCccchhhHHHHHHHHh---CCC
Confidence 012232222 2334445555444 345 778999999999999999999876 456
Q ss_pred EEcCCCCCCCcHHHHHHHH
Q 039172 391 LVCPPPSLCTDNGVMVAWT 409 (477)
Q Consensus 391 l~~Pp~~~ctDNGamIa~a 409 (477)
+..|+ -.|-++.+|++
T Consensus 254 v~~~~---~p~~a~a~Gaa 269 (272)
T 3h1q_A 254 VQVPI---HPLLVTPLGIA 269 (272)
T ss_dssp CBCCS---SGGGHHHHHHH
T ss_pred ccccC---ChHHHHHHHHH
Confidence 66654 24556666654
No 22
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=97.43 E-value=0.014 Score=58.01 Aligned_cols=103 Identities=24% Similarity=0.222 Sum_probs=66.6
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.++||||-..+.+.++++|.+|+++...... + | .....-.+.+...+++++++ .++.+|+++.
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~-------~----~-~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~~ 64 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVA-------T----P-PTAEGIVDAICAAVAGASEG-----HDVEAVGIGA 64 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEE-------C----C-SSHHHHHHHHHHHHHHHHTT-----CCEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEee-------C----C-CCHHHHHHHHHHHHHHHHhh-----cCceEEEEec
Confidence 4799999999999999999889887654321 0 1 11223334555566666543 3678888774
Q ss_pred CCCcchh---h-H-------HHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 153 GPGLSLC---L-R-------VGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 153 GPG~~t~---L-r-------vG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
||.+.. . . -+..+.+.|...+++|++-.|-..+-+++-+.
T Consensus 65 -pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~ 115 (321)
T 3vgl_A 65 -AGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYR 115 (321)
T ss_dssp -SSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred -cccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHH
Confidence 554321 0 0 12345677888889999888887777666543
No 23
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.41 E-value=0.0059 Score=60.31 Aligned_cols=105 Identities=22% Similarity=0.259 Sum_probs=66.1
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|++||||-..+.+.++++|.++ ++...... .|......-.+.+..++++++++. ..++.+|+++.
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~~-~l~~~~~~-----------~~~~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~ 65 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGKR-LLSKVVVP-----------TPKEGGERVAEALAEAAERAEREA---GVRGEAIGLGT 65 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSSS-BSCCEEEE-----------CCSSCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE
T ss_pred CEEEEEEEcCCEEEEEEEeCCC-cEEEEEEc-----------CCCCChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe
Confidence 6899999999999999999764 44222111 111222233445666777777654 35688888774
Q ss_pred CCCcch---h-------h--HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 153 GPGLSL---C-------L--RVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 153 GPG~~t---~-------L--rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
||.+. + + --++.+.+.|...+++|++-.|-..+-+++-+.
T Consensus 66 -pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~ 117 (302)
T 3vov_A 66 -PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHH 117 (302)
T ss_dssp -SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHH
T ss_pred -cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHH
Confidence 45321 1 1 012446677888899999888877777666543
No 24
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=97.41 E-value=0.052 Score=57.80 Aligned_cols=76 Identities=16% Similarity=0.227 Sum_probs=55.7
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++||||-++..+-++|+|.+|++++....+- ..+.+..|.+ |.....-.+.+...++++++++++.+++|.+|++|
T Consensus 5 YvlgID~GTss~Ka~l~d~~G~~va~~~~~~-~~~~p~~G~~-Eqdp~~~w~~~~~~i~~~l~~~~~~~~~I~aIgis 80 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHDANIISVSQREF-EQIYPKPGWV-EHDPMEIWATQSSTLVEVLAKADISSDQIAAIGIT 80 (526)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEEEccccceeeeEEcCCCCEEEEEEEec-CcccCCCCcE-EECHHHHHHHHHHHHHHHHHHcCCChhhEEEEEEe
Confidence 7999999999999999999999997654331 1112223332 12233445667788899999999999999999986
No 25
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=97.40 E-value=0.017 Score=57.28 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=69.1
Q ss_pred CCCcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEE
Q 039172 70 KDDLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVA 149 (477)
Q Consensus 70 ~~~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IA 149 (477)
.+..++||||-..+.+.++++|.+|+++......- . .+ .....-.+.+...++++++ ...++.+|+
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~-~---~~------~~~~~~~~~i~~~i~~~~~----~~~~i~gig 81 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGEIQNATRFMT-A---DW------VNGIGFVESMKLEIGNFLK----QYPIVKGVG 81 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCCEEEEEEEEH-H---HH------HTTTCHHHHHHHHHHHHHH----HCTTCCEEE
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeC-C---CC------CCHHHHHHHHHHHHHHHHh----ccCCeeEEE
Confidence 34457999999999999999998899887654321 0 00 0011123345556666665 335788888
Q ss_pred EecCCCcch---h-------h--HHHHHHHHHHHhhc-CCCEEEeccHHHHHHHHHH
Q 039172 150 VTIGPGLSL---C-------L--RVGVQKARKIAGQF-NLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 150 vt~GPG~~t---~-------L--rvG~~~Ak~La~~~-~~Pli~V~H~~AHa~sa~~ 193 (477)
++. ||.+. + + --++.+++.|...+ ++|++-.|-..+-+++-+.
T Consensus 82 i~~-pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~ 137 (321)
T 3r8e_A 82 IGW-PGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYY 137 (321)
T ss_dssp EEE-SSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHH
T ss_pred EEe-cccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHH
Confidence 875 66432 1 1 01345677888889 9999888887777666543
No 26
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=97.40 E-value=0.0078 Score=61.72 Aligned_cols=110 Identities=11% Similarity=0.106 Sum_probs=76.0
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
..++||||-..+.+.++++|.+|+++......- |+.....-.+.+...+++++++.++...++.+|+++
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~ 152 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQEL-----------ALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAIT 152 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEEC-----------CSSCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEE
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecC-----------CCCCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEE
Confidence 457899999999999999998899987654321 111111234566778889999888777788888877
Q ss_pred cCCCcch---h-------h--HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 152 IGPGLSL---C-------L--RVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 152 ~GPG~~t---~-------L--rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
. ||.+. + + --++.+++.|...+++|++-.|-..+.+++-+.
T Consensus 153 ~-pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~ 205 (406)
T 1z6r_A 153 L-PGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEAL 205 (406)
T ss_dssp E-SSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHH
T ss_pred e-ecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHH
Confidence 3 44321 1 1 013456677888889999888887777766543
No 27
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.39 E-value=0.043 Score=53.86 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=65.6
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.|++||||-..+.+.++++|.+|+++......- |.... +.+...+.+.+++ ..++.+|+++
T Consensus 3 ~m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~-----------~~~~~----~~~~~~i~~~~~~----~~~i~gigi~ 63 (297)
T 4htl_A 3 AMKIAAFDIGGTALKMGVVLPHGEIILTKSAEI-----------SGSDG----DQILAEMKVFLAE----NTDVTGIAVS 63 (297)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEEEEEEC-----------STTCH----HHHHHHHHHHHHT----CTTCCEEEEE
T ss_pred ccEEEEEEeCCCeEEEEEECCCCCEEEEEEecC-----------CCCCH----HHHHHHHHHHHhh----cCCeeEEEEe
Confidence 378999999999999999999999987654320 11111 2344445555553 2468888877
Q ss_pred cCCCcch----------hh--HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 152 IGPGLSL----------CL--RVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 152 ~GPG~~t----------~L--rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
. ||.+. .+ --++.+.+.|...+++|++-.|-..+-+++-+.
T Consensus 64 ~-pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~ 116 (297)
T 4htl_A 64 A-PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKW 116 (297)
T ss_dssp E-SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred c-CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHH
Confidence 4 55321 11 012346677888899999888877776665543
No 28
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=97.38 E-value=0.016 Score=59.01 Aligned_cols=111 Identities=17% Similarity=0.197 Sum_probs=77.1
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
..++||||-..+.+.++++|.+|+++......- . +......-.+.+...+++++++.++...++.+|+++
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~-----~-----~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~ 155 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNILAHEAHPL-----P-----SQSDREETLNVMYRIIDRAKDMMEKLGSKLSALTVA 155 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEEC-----C-----SSCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEEEEEEEcc-----C-----CCCCHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEE
Confidence 457999999999999999998999987654321 0 011233345667778888888887777789999887
Q ss_pred cCCCcch---hhH--------HHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 152 IGPGLSL---CLR--------VGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 152 ~GPG~~t---~Lr--------vG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
. ||... +.- -++.+++.|...+++|++-.|-..+-+++-+.
T Consensus 156 ~-pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~ 207 (380)
T 2hoe_A 156 A-PGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKW 207 (380)
T ss_dssp E-SSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHH
T ss_pred e-eccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHH
Confidence 3 55432 110 12456677888889999888887777766543
No 29
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=97.35 E-value=0.029 Score=59.63 Aligned_cols=77 Identities=17% Similarity=0.153 Sum_probs=55.5
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.++||||-+...+.++|+|.+|++++....+- ....+..|.+ +.....-.+.+...++++++++++...+|.+|+++
T Consensus 7 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~-~~~~p~~g~~-e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis 83 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRLPDTVVAVASRPT-TLSSPHPGWA-EEDPAQWWDNARAVLAELKTTAGESDWRPGGICVT 83 (508)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHHCGGGCCEEEEEEE
T ss_pred CEEEEEEecCcceEEEEECCCCCEEEEEEEec-ceecCCCCce-EECHHHHHHHHHHHHHHHHHhcCCChhheEEEEEE
Confidence 47999999999999999999999998754321 1111112321 22334456677788889999889888899999987
No 30
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.33 E-value=0.14 Score=50.84 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=75.8
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccc-hhcHHHHHHhHHHHHHHHHHHCCCCCC-CcCEEEE
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAP-KMAEEAHSLAIDPVVQEALHKANLTER-DLSAVAV 150 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P-~~a~~~H~~~l~~~i~~~L~~agi~~~-did~IAv 150 (477)
|++||||-..+.+.++++|.+|+++....... ..+ +.....-.+.+...+++++++.++..+ ++.+|++
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~---------~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi 76 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSEDGKILAEADGLS---------TNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGL 76 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETTSCEEEEEEECC---------CCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEE
T ss_pred eEEEEEEcCccceEEEEEeCCCCEEEEEeCCC---------CCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEE
Confidence 47999999999999999998899887654310 000 012233456677888899998888776 7999988
Q ss_pred ecCCCcchhhHHHHHHHHHHHhhcC---CCEEEeccHHHHHHH
Q 039172 151 TIGPGLSLCLRVGVQKARKIAGQFN---LPIVGVHHMEAHALV 190 (477)
Q Consensus 151 t~GPG~~t~LrvG~~~Ak~La~~~~---~Pli~V~H~~AHa~s 190 (477)
+ -||.... .....+.+.|...++ +|++-.|-..+.+++
T Consensus 77 ~-~pG~vd~-~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 77 S-LSGGDQE-DAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp E-ETTTTCH-HHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred e-ccCCCch-HHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 7 3665532 134566777888886 899888877776655
No 31
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=97.17 E-value=0.062 Score=55.03 Aligned_cols=286 Identities=16% Similarity=0.208 Sum_probs=146.1
Q ss_pred cEEEEEec--ccccceEEEEecCCe---EEEEeeeh-----hhhhhhhcCCccch---hcH--HHHHHhHHHHHHHHHHH
Q 039172 73 LIILGIET--SCDDTAAAVVRGNGE---ILSQVVSS-----QADLLAKYGGVAPK---MAE--EAHSLAIDPVVQEALHK 137 (477)
Q Consensus 73 m~iLgIeT--S~ddtsvAlv~~dg~---il~~~~~s-----q~~~h~~~gGv~P~---~a~--~~H~~~l~~~i~~~L~~ 137 (477)
++++|+-| |-|-.=+|+++-+++ ++...... +..+..-..+-.-+ .+. ..-.+....+++++|++
T Consensus 5 ~~~iGlMSGTSlDGiD~alv~~~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~~~~~~~~~~l~~~lg~~~a~av~~~l~~ 84 (370)
T 3cqy_A 5 AYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLGRLDRSVGKLFALAVNNLLAK 84 (370)
T ss_dssp CEEEEEEECTTCCCEEEEEEECSSSSCEEEEEEEECCCHHHHHHHHGGGCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecccchhhHeEEEEEEeCCeEEEEeeeeecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788875 667777888876553 44433211 11111111111111 111 11122345788999999
Q ss_pred CCCCCCCcCEEEEe-----cCC-C-cchhhHHHHHHHHHHHhhcCC------------------CEEEeccHHHHHHHHH
Q 039172 138 ANLTERDLSAVAVT-----IGP-G-LSLCLRVGVQKARKIAGQFNL------------------PIVGVHHMEAHALVAR 192 (477)
Q Consensus 138 agi~~~did~IAvt-----~GP-G-~~t~LrvG~~~Ak~La~~~~~------------------Pli~V~H~~AHa~sa~ 192 (477)
+++++++||+|++- .-| | .-..+.+|-. ..||...++ |+++.-|...
T Consensus 85 ~~~~~~~i~~IGsHGQTv~H~P~~~~~~TlQiGd~--~~iA~~tgi~vV~DFR~~DvAaGGQGAPLvP~fh~~l------ 156 (370)
T 3cqy_A 85 TKIAKDEIIAIGSHGQTVRHMPNLEVGFTLQIGDP--NTIATETGIDVIADFRRKDIALGGQGAPLVPAFHQQT------ 156 (370)
T ss_dssp HCCCGGGEEEEEEEEEEEEEETTSSSCEEEEESCH--HHHHHHHSSCEEECCHHHHHHTTSCCCCCHHHHHHHH------
T ss_pred cCCCcccccEEEeCCcccccCCCCCCCceEecCCH--HHHHHHHCcCEEeeChhhHhhCCCCCCCchHHHHHHH------
Confidence 99999999999954 235 2 1123444422 224444444 5554333211
Q ss_pred HhhhhcCCcCceeeeeccceeeeeccCCceEEEEEccC-CceeEecccccchhhhH-HHHHHH-HcCCCCCCCChhHHHH
Q 039172 193 QWLTMTRMQNDFLDLFNNIHIGQKDTSGHNLLVLAHNL-GQYTQLGTTIDDAIGEA-FDKTAK-WLGLDMRRSGGPAVEK 269 (477)
Q Consensus 193 ~~~~~~~~~~P~l~llDgvyvG~~~SGGht~lv~v~~~-~~~~iLg~t~D~S~Ge~-fDkvAr-~LGl~~~~~gG~~iE~ 269 (477)
+ .++ ..+-+++= .||-.-+.+.... +. ++ -+|...|.+ .|...+ ..|.+|..+ | +
T Consensus 157 f---~~~-~~~r~~lN---------IGGIaNiT~l~~~~~~--v~--~fDtGPgN~LiD~~~~~~~~~~yD~~-G----~ 214 (370)
T 3cqy_A 157 F---AQV-GKKRVILN---------IGGIANITYLPGNSEE--VL--GFDTGPGNTLIDAWVQQVKNESYDKN-G----A 214 (370)
T ss_dssp H---CCT-TCCEEEEE---------ESSEEEEEEECSSSSC--CE--EEEEEESSHHHHHHHHHHHCCSSCGG-G----H
T ss_pred h---CCC-CCCeEEEE---------ccceEEEEEEcCCCCC--eE--EEeCCchhHHHHHHHHHHHCcCCCCC-C----H
Confidence 1 111 12222221 4664444444222 21 22 357777765 565554 468888732 3 2
Q ss_pred hhhcCCCc-----------cccccccccCCCCceeecchHHHHHHHHHHhhcCCCCCCCCCCcccccCCHHHHHHHHHHH
Q 039172 270 LALEGDAE-----------SVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNIDSRIPISSTSCQDRKSRANIAASFQRV 338 (477)
Q Consensus 270 LA~~g~~~-----------~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~~~~~~~~~~~~~~~~~~dIAasfQ~a 338 (477)
+|..|+.+ .|..|.|.+ ...-.|. ...+...++... ....+|+.|.+-+-
T Consensus 215 ~A~~G~v~~~lL~~ll~~pyf~~~pPKS-tGRE~F~----~~~l~~~l~~~~--------------~l~~~Dv~ATLt~~ 275 (370)
T 3cqy_A 215 WAASGKTDPQLLAQLLSHPYFSLAYPKS-TGRELFN----QAWLEQQLSAFN--------------QLNEEDIQSTLLDL 275 (370)
T ss_dssp HHHHSCCCHHHHHHHHTCGGGGSCSSCC-CCSSSSS----HHHHHHHTTTCT--------------TSCHHHHHHHHHHH
T ss_pred hhcCCCccHHHHHHHhcCccccCCCCCc-cChhhcC----HHHHHHHHHhcc--------------CCCHHHHHHHHHHH
Confidence 45555432 344455543 2223443 111222222110 12367887766666
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCC-CCCCCc--HHHHHHHHHHHHHH
Q 039172 339 AVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPP-PSLCTD--NGVMVAWTGIEHFC 415 (477)
Q Consensus 339 v~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp-~~~ctD--NGamIa~ag~~~~~ 415 (477)
.+..+++-+++ + . ..++|+++||=+.|..|.++|++.+. +.+|.-.. .-...| -+++.||.|++.+.
T Consensus 276 TA~sIa~~~~~----~---~-~~~~v~vcGGGa~N~~Lm~~L~~~l~--~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~l~ 345 (370)
T 3cqy_A 276 TCHSIAQDILK----L---A-QEGELFVCGGGAFNAELMQRLAALLP--GYRIDTTSALGVDPKWAEGIAFAWLAMRYQL 345 (370)
T ss_dssp HHHHHHHHHHH----H---C-SSEEEEEESGGGGCHHHHHHHHHHCT--TEEEEEGGGGTCCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh----c---C-CCCEEEEECCCcCCHHHHHHHHHhCC--CCeeeeHHHhCCChhHHHHHHHHHHHHHHHc
Confidence 65555544332 1 1 34689999999999999999998763 34443211 111223 46777999988875
Q ss_pred cCC
Q 039172 416 VGR 418 (477)
Q Consensus 416 ~g~ 418 (477)
|.
T Consensus 346 -g~ 347 (370)
T 3cqy_A 346 -GL 347 (370)
T ss_dssp -TC
T ss_pred -CC
Confidence 54
No 32
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=97.01 E-value=0.078 Score=52.85 Aligned_cols=109 Identities=21% Similarity=0.212 Sum_probs=72.6
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.+++||||-..+.+.++++|.+|+++......- |. ....-.+.+...+++++++.+....++.+|+++
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~-----------~~-~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~ 96 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFN-----------PK-TYEERINLILQMCVEAAAEAVKLNCRILGVGIS 96 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSCEEEEEEEEC-----------CS-SHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCCCcEEEEEEEcC-----------CC-CHHHHHHHHHHHHHHHHHhcccccCceEEEEEe
Confidence 468999999999999999998999987653210 11 122334566777888887765555678888876
Q ss_pred cCCCcch---h-------h---HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 152 IGPGLSL---C-------L---RVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 152 ~GPG~~t---~-------L---rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
. ||.+. + + --++.+++.|...+++|++-.|-..+-+++.+.
T Consensus 97 ~-pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~ 150 (343)
T 2yhw_A 97 T-GGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERK 150 (343)
T ss_dssp E-SSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred c-ccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHH
Confidence 3 55321 1 1 012335667777889999888887777666543
No 33
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=96.74 E-value=0.084 Score=52.17 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=66.1
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
+++||||-..+.+.++++|.+|+++......- |......-.+.+..++++++.+.+ ++.+|++..
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~~ 88 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDSTRRLQWEKRVPT-----------PHTSYSAFLDAVCELVEEADQRFG----VKGSVGIGI 88 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEEEEEEEEC-----------CCSCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCCCCEEEEEEecC-----------CCCCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 46999999999999999998899887653220 001122334555566666665432 477777653
Q ss_pred CCCcch---h-h-------HHHHHHHHHHHhhcCCCEEEeccHHHHHHHHH
Q 039172 153 GPGLSL---C-L-------RVGVQKARKIAGQFNLPIVGVHHMEAHALVAR 192 (477)
Q Consensus 153 GPG~~t---~-L-------rvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~ 192 (477)
||.+. + + --++.+.+.|...+++|++-.|-..+.+++.+
T Consensus 89 -pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~ 138 (327)
T 2ap1_A 89 -PGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEA 138 (327)
T ss_dssp -SSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHH
T ss_pred -eeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHH
Confidence 34321 1 0 02344566777788999988888877766544
No 34
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.65 E-value=0.54 Score=45.57 Aligned_cols=101 Identities=14% Similarity=0.120 Sum_probs=62.4
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
||++||||-..+.+.++++|.+|+++......- .+.. +.....-.+.+...+++++++. +..|++.
T Consensus 1 mM~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~-------~~~~-~~~~~~~~~~i~~~i~~~~~~~------~~~igi~ 66 (299)
T 2e2o_A 1 MMIIVGVDAGGTKTKAVAYDCEGNFIGEGSSGP-------GNYH-NVGLTRAIENIKEAVKIAAKGE------ADVVGMG 66 (299)
T ss_dssp CCCEEEEEECSSCEEEEEECTTSCEEEEEEESC-------CCHH-HHCHHHHHHHHHHHHHHHHTSC------CSEEEEE
T ss_pred CeEEEEEEeCCCcEEEEEEcCCCCEEEEEeCCC-------CCcc-cCCHHHHHHHHHHHHHHHHhcC------CCEEEEE
Confidence 357999999999999999998899887653220 0000 0112223445556666665532 6678776
Q ss_pred c-CCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHH
Q 039172 152 I-GPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALV 190 (477)
Q Consensus 152 ~-GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~s 190 (477)
. ||..-++. ..+.+.|.. +++|++-.|-..+-+++
T Consensus 67 ~~G~~~~~~~---~~l~~~l~~-~~~pv~v~ND~~aaa~~ 102 (299)
T 2e2o_A 67 VAGLDSKFDW---ENFTPLASL-IAPKVIIQHDGVIALFA 102 (299)
T ss_dssp ETTCCSHHHH---HHHHHHHTT-SSSEEEEEEHHHHHHHH
T ss_pred cCCCCchhHH---HHHHHHHHh-CCCCEEEeCcHHHHHhh
Confidence 3 44222222 456667777 88999877776666554
No 35
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=96.36 E-value=0.52 Score=45.82 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=60.8
Q ss_pred EEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchh-cHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKM-AEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 75 iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~-a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+||||-....+.++++| +|+++...... ...|.. ....-.+.+..++++.+ ++...++..|++..
T Consensus 2 ~lgiDiGGT~~~~~l~d-~g~il~~~~~~---------~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~- 67 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-EGKSLGRFQTS---------GINPFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG- 67 (291)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEE---------CCCTTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE-
T ss_pred EEEEEeCccceEEEEEe-CCeEEEEEECC---------CCCcccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC-
Confidence 79999999999999999 99988765321 001100 11222333444444433 34556788888763
Q ss_pred CCcchhhHHHHHHHHHHHhhcC--CCEEEeccHHHHHHH
Q 039172 154 PGLSLCLRVGVQKARKIAGQFN--LPIVGVHHMEAHALV 190 (477)
Q Consensus 154 PG~~t~LrvG~~~Ak~La~~~~--~Pli~V~H~~AHa~s 190 (477)
||.. -..+..+.+.|...++ +|+.-.|...+-++.
T Consensus 68 pG~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~g 104 (291)
T 1zbs_A 68 AGCT--PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARA 104 (291)
T ss_dssp TTCC--TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHH
T ss_pred CCCC--hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHh
Confidence 6643 2234456677777788 488777766665443
No 36
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.28 E-value=0.87 Score=46.32 Aligned_cols=106 Identities=14% Similarity=0.140 Sum_probs=64.1
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
+++||||-..+.+.++++|.+ +++......- .... ..+ |+.. ....+.....+.+++++.++..+++.+| +..
T Consensus 2 ~~vlgidiGgt~ik~al~d~~-~il~~~~~~~-~~~~-~~~--~~~~-~~~~~~~~~~i~~~l~~~~~~~~~i~gI-i~~ 74 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE-RMVKMQNFSH-SPDE-LGR--FQKI-LDQLEFREKIARQFVEETGYSLSSFSAF-VSR 74 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT-EEEEEEEEEC-CHHH-HHT--CSSG-GGGHHHHHHHHHHHHHTTTCCGGGCSEE-EEE
T ss_pred CeEEEEECCccceeEEEEecc-hheeeeeccc-Cccc-ccc--hhhH-HHHHHHHHHHHHHHHHHcCCCccCceEE-Eec
Confidence 479999999999999999965 7776543221 0000 000 1100 0111112567788888888777789998 553
Q ss_pred -CC-----Ccc------------------hhhHHHHHHHHHHHhhcCCCEEEeccHH
Q 039172 153 -GP-----GLS------------------LCLRVGVQKARKIAGQFNLPIVGVHHME 185 (477)
Q Consensus 153 -GP-----G~~------------------t~LrvG~~~Ak~La~~~~~Pli~V~H~~ 185 (477)
|| |.. ..-..+...++.|...+++|++-.|-..
T Consensus 75 pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan 131 (381)
T 1saz_A 75 GGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVV 131 (381)
T ss_dssp CCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTT
T ss_pred CCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCc
Confidence 21 211 1112266777888888999998777654
No 37
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=94.93 E-value=2.6 Score=42.82 Aligned_cols=103 Identities=16% Similarity=0.194 Sum_probs=64.6
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEe-eehhhhhhhhcCCccchhcHHHHHHhHHHHHHH---HHHHCCCCCCCcCE
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQV-VSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQE---ALHKANLTERDLSA 147 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~-~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~---~L~~agi~~~did~ 147 (477)
..++||||-..+.+.++++| +|+++... ... .... ..+.+...+.+ .+++. +. .++.+
T Consensus 8 ~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~-------------~~~~--~~~~~l~~i~~~~~~i~~~-~~-~~i~g 69 (366)
T 3mcp_A 8 NRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLP-------------ACAD--CLDKCLGNLVEGFKAIQAG-LP-EAPVA 69 (366)
T ss_dssp CCEEEEEECSSSEEEEEEEE-TTEECSCCEEEE-------------CCTT--CHHHHHHHHHHHHHHHHTT-CS-SCCCE
T ss_pred CCEEEEEEECcceEEEEEEE-CCEEEEEEEEEE-------------CCCC--CHHHHHHHHHHHHHHHHHH-hh-cCCeE
Confidence 44799999999999999999 99987543 211 0100 11222333333 44332 11 57888
Q ss_pred EEEecCCCcch-------------hhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 148 VAVTIGPGLSL-------------CLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 148 IAvt~GPG~~t-------------~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
|++.. ||.+. +++-++.+++.|...+++|++-.|-..+-+++-..
T Consensus 70 IGIav-PG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~ 127 (366)
T 3mcp_A 70 ISFAF-PGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEAL 127 (366)
T ss_dssp EEEEC-CSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHH
T ss_pred EEEEe-cceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHH
Confidence 98875 55431 22114566778888999999888887777766544
No 38
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=94.14 E-value=4.7 Score=39.47 Aligned_cols=102 Identities=15% Similarity=0.198 Sum_probs=62.8
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.++||||-..+.+.++++|.+|+++......- |+.....-.+.+..++++++++.+. ++.+|++..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~~---~i~gigi~~ 72 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAEGETLHCEKKRT-----------AEVIAPGLVSGIGEMIDEQLRRFNA---RCHGLVMGF 72 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEH-----------HHHHTTCHHHHHHHHHHHHHHHHTE---EEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEECCCCCEEEEEEecC-----------ccccHHHHHHHHHHHHHHHHHhcCC---CeeEEEEec
Confidence 47999999999999999999999987653221 0000011123444566666665443 466777663
Q ss_pred CCCcch---h-------h--HH--HHHHHHHHHhhcCCCEEEeccHHHHHH
Q 039172 153 GPGLSL---C-------L--RV--GVQKARKIAGQFNLPIVGVHHMEAHAL 189 (477)
Q Consensus 153 GPG~~t---~-------L--rv--G~~~Ak~La~~~~~Pli~V~H~~AHa~ 189 (477)
||.+. + + .- +..+++.|...+++|++-.|-..+-++
T Consensus 73 -pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~ 122 (310)
T 3htv_A 73 -PALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLS 122 (310)
T ss_dssp -SSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHH
T ss_pred -cccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHH
Confidence 44321 1 1 11 135677888889999987776655443
No 39
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=93.99 E-value=5.1 Score=39.41 Aligned_cols=98 Identities=10% Similarity=0.123 Sum_probs=63.0
Q ss_pred CCCcEEEEEecccccceEEEEe-cCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEE
Q 039172 70 KDDLIILGIETSCDDTAAAVVR-GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAV 148 (477)
Q Consensus 70 ~~~m~iLgIeTS~ddtsvAlv~-~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~I 148 (477)
.++.++||||-....+.++++| .+|+++...... .. ..+.+...+++++++.+ .++.+|
T Consensus 11 ~~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~-------------~~----~~~~~~~~i~~~~~~~~---~~i~gi 70 (332)
T 1sz2_A 11 GSTKYALVGDVGGTNARLALCDIASGEISQAKTYS-------------GL----DYPSLEAVIRVYLEEHK---VEVKDG 70 (332)
T ss_dssp ---CEEEEEEEETTEEEEEEEETTTCCEEEEEEEE-------------GG----GCSCHHHHHHHHHHHSC---CCCCEE
T ss_pred CCCCEEEEEEechhheEEEEEECCCCcEEEEEEec-------------CC----CcCCHHHHHHHHHHhcC---CCccEE
Confidence 3466899999999999999999 578887543211 10 01234567778887765 267788
Q ss_pred EEecCCCcch---------hhHHHHHHHHHHHhhcCCC-EEEeccHHHHHHHH
Q 039172 149 AVTIGPGLSL---------CLRVGVQKARKIAGQFNLP-IVGVHHMEAHALVA 191 (477)
Q Consensus 149 Avt~GPG~~t---------~LrvG~~~Ak~La~~~~~P-li~V~H~~AHa~sa 191 (477)
++.. ||... +.+ +. .+.|...+++| ++-.|-..+.+++-
T Consensus 71 gi~~-pG~vd~~~~~~~nl~w~--~~-~~~l~~~~~~p~V~v~NDanaaalgE 119 (332)
T 1sz2_A 71 CIAI-ACPITGDWVAMTNHTWA--FS-IAEMKKNLGFSHLEIINDFTAVSMAI 119 (332)
T ss_dssp EEEE-SSCCCSSEECCSSSCCC--EE-HHHHHHHHTCSEEEEEEHHHHHHHHG
T ss_pred EEEE-eCceeCCEEeeeCCCCc--CC-HHHHHHHhCCCcEEEEeCHhHHhccc
Confidence 7763 44321 111 22 35677788999 88888888876654
No 40
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=92.84 E-value=1.3 Score=43.08 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=66.4
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCc--CEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDL--SAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~di--d~IAvt 151 (477)
++||||-....+.++++|.+|+++....... ..+......-.+.+..++++++++.+++.++| ..|++.
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~---------~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~igig 82 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTPLAMAEGGA---------SALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLG 82 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCEEEEEEESC---------CCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEE
T ss_pred EEEEEEcCccceEEEEEcCCCCEEEEEeCCC---------CCcccCHHHHHHHHHHHHHHHHHhcCCChhhhccceEEEE
Confidence 6999999999999999998899887653210 00111223345677788999999988887787 567765
Q ss_pred cCCCcchhhHHHHHHHHHHHhhc--CCCEEEeccHHHHHH
Q 039172 152 IGPGLSLCLRVGVQKARKIAGQF--NLPIVGVHHMEAHAL 189 (477)
Q Consensus 152 ~GPG~~t~LrvG~~~Ak~La~~~--~~Pli~V~H~~AHa~ 189 (477)
. ||....-. +. .|...+ ++|+.-.|-..+-++
T Consensus 83 ~-pG~v~~~~-~~----~l~~~~~~~~pv~v~NDa~aaa~ 116 (305)
T 1zc6_A 83 L-SGVHNRQW-AG----EFESQAPGFARLSLATDGYTTLL 116 (305)
T ss_dssp E-SCCCTTSH-HH----HHHHTCCCCSEEEEECHHHHHHH
T ss_pred e-cCCCchHH-HH----HHHHhCCCCceEEEECCHHHHHH
Confidence 3 55432211 11 155556 688887776666443
No 41
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.77 E-value=0.23 Score=52.58 Aligned_cols=79 Identities=15% Similarity=0.200 Sum_probs=56.6
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++++||||-+...+.++|+|.+|++++....+- ..+.+..|.+ +.....-.+.+...++++++++++...+|.+|+++
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~-~~~~p~~g~~-e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis 79 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHDANIISVSQREF-EQIYPKPGWV-EHDPMEIWATQSSTLVEVLAKADISSDQIAAIGIT 79 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred CcEEEEEEcCCcceEEEEECCCCCEEEEEEEec-ccccCCCCcE-EECHHHHHHHHHHHHHHHHHHcCCChhheEEEEEe
Confidence 457999999999999999999999988654321 1111112321 22234455677788899999999988999999987
Q ss_pred c
Q 039172 152 I 152 (477)
Q Consensus 152 ~ 152 (477)
.
T Consensus 80 ~ 80 (510)
T 2p3r_A 80 N 80 (510)
T ss_dssp E
T ss_pred C
Confidence 4
No 42
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=92.36 E-value=0.37 Score=51.39 Aligned_cols=81 Identities=12% Similarity=0.101 Sum_probs=53.0
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhc---CCcc--c----hhcHHHHHHhHHHHHHHHHHHCCCCC
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKY---GGVA--P----KMAEEAHSLAIDPVVQEALHKANLTE 142 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~---gGv~--P----~~a~~~H~~~l~~~i~~~L~~agi~~ 142 (477)
+.++||||-++..+.++|+|.+|++++....+-...+.++ +|.+ | |.....-.......+.++|+++++..
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l~~~~~~~ 88 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMKASGFDF 88 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHHHHcCCCh
Confidence 3489999999999999999999999987755422122222 5654 1 11111112222334445677888888
Q ss_pred CCcCEEEEec
Q 039172 143 RDLSAVAVTI 152 (477)
Q Consensus 143 ~did~IAvt~ 152 (477)
++|.+|+++.
T Consensus 89 ~~I~aIgis~ 98 (538)
T 4bc3_A 89 SQVLALSGAG 98 (538)
T ss_dssp GGEEEEEEEE
T ss_pred HHeEEEEecc
Confidence 9999999874
No 43
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=91.75 E-value=0.45 Score=50.49 Aligned_cols=76 Identities=25% Similarity=0.285 Sum_probs=54.5
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++||||-....+.++|+|.+|+++.....+- ..+.+..|.+ +.....-.+.+...++++++++++...+|.+|+++
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~-~~~~p~~g~~-e~dp~~~~~~i~~~i~~~~~~~~~~~~~I~~Igis 102 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQKIAGVGQKEF-KQHFPKSGWV-EHDPEEIWQTVVSTVKEAIEKSGITANDIAAIGIT 102 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEE
T ss_pred eEEEEEeCCcceEEEEECCCCCEEEEEEEec-ccccCCCCcE-EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 6999999999999999999999988754321 1111112221 22234455677788899999999988899999987
No 44
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=91.67 E-value=0.35 Score=51.14 Aligned_cols=78 Identities=10% Similarity=0.208 Sum_probs=55.3
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.++||||-+...+.++|+|.+|++++....+-...+ +..|.+ +.....-.+.+...++++++++++...+|.+|+++.
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~-p~~g~~-e~dp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 82 (506)
T 3h3n_X 5 NYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYF-PKSGWV-EHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITN 82 (506)
T ss_dssp CEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBC-SSTTCC-EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEE
T ss_pred CEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccC-CCCCcE-EECHHHHHHHHHHHHHHHHHHcCCChhheEEEEeeC
Confidence 479999999999999999999999886543211111 112221 222344456677888899999999888999999873
No 45
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=91.50 E-value=0.37 Score=50.70 Aligned_cols=76 Identities=16% Similarity=0.143 Sum_probs=54.5
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++||||-+...+.++|+|.+|+++......-...+.+.|.+ +.....-.+.+...++++++++++...+|.+|+++
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis 78 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWV--EHDPLEIWETTLWAAREVLRRAGAEAGEVLALGIT 78 (495)
T ss_dssp CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCC--EECHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred EEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcE--eeCHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 58999999999999999999998876543211111122222 22334456677788899999988888899999987
No 46
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=91.39 E-value=0.29 Score=52.40 Aligned_cols=80 Identities=13% Similarity=0.221 Sum_probs=57.4
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+.++||||-+...+.++|+|.+|++++....+- ..+.+..|.+ +.....-.+.+...++++++++++...+|.+|+++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~-~~~~p~~g~~-eqdp~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis 81 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQGRMVGQASREI-TMFKPKADFV-EQSSENIWQAVCNAVRDAVNQADINPIQVKGLGFD 81 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETTSCEEEEEEEEC-CCEEEETTEE-EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred CcEEEEEEECcccEEEEEECCCCCEEEEEEEec-ccccCCCCcc-ccCHHHHHHHHHHHHHHHHHHcCCCHhHEEEEEEc
Confidence 347999999999999999999999998654321 1111222321 22334456677788899999999988999999987
Q ss_pred cC
Q 039172 152 IG 153 (477)
Q Consensus 152 ~G 153 (477)
..
T Consensus 82 ~~ 83 (554)
T 3l0q_A 82 AT 83 (554)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 47
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=91.34 E-value=0.39 Score=50.62 Aligned_cols=77 Identities=14% Similarity=0.214 Sum_probs=54.9
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
++||||-+...+.++|+|.+|++++....+- ..+.+..|.+ +.....-.+.+...++++++++++...+|.+|+++.
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~-~~~~p~~g~~-e~d~~~~~~~~~~~i~~~~~~~~~~~~~I~~Igis~ 83 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKGEIAGVAQREF-KQYFPQSGWV-EHDANEIWTSVLAVMTEVINENDVRADQIAGIGITN 83 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEE
T ss_pred EEEEEEeCccceEEEEEcCCCCEEEEEEeec-ccccCCCCcE-EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEEC
Confidence 7999999999999999999999988654321 1111112221 222334456677888999999999889999999873
No 48
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=91.27 E-value=0.37 Score=50.72 Aligned_cols=76 Identities=16% Similarity=0.183 Sum_probs=54.3
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++||||-+...+.++|+|.+|+++......-...+.+.|.+ +.....-.+.+...++++++++++..++|.+|+++
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~--e~d~~~~~~~~~~~i~~~~~~~~~~~~~i~~Igis 79 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWV--EHNPEEIWDAQLRAIKDAIQSARIEPNQIAAIGVT 79 (497)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCC--EECHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred EEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcE--EECHHHHHHHHHHHHHHHHHhcCCCcccEEEEEEe
Confidence 68999999999999999988998876643211111222222 22234445677788888898888888899999987
No 49
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=90.98 E-value=1.7 Score=45.76 Aligned_cols=83 Identities=11% Similarity=0.140 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
.+.++++++.+.++-.+.+.++...+.. ...+++|.++||.+.|..+++.+.+.+ |.+|.+|.. .+ +.++
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~---g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~---~e-~~al 442 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDS---GIDIPLLKVDGGAAKNDLLMQFQADIL---DIDVQRAAN---LE-TTAL 442 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH---CSCCCEEEEESGGGGCHHHHHHHHHHH---TSEEEECSS---SC-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCEEEEecccccCHHHHHHHHHHh---CCeEEecCC---Cc-chhH
Confidence 4788998888877766555444322111 234689999999999999999888876 679988862 33 5566
Q ss_pred HHHHHHHHHcCCC
Q 039172 407 AWTGIEHFCVGRF 419 (477)
Q Consensus 407 a~ag~~~~~~g~~ 419 (477)
|.|-+-.+..|..
T Consensus 443 GaA~lA~~a~G~~ 455 (506)
T 3h3n_X 443 GAAYLAGLAVGFW 455 (506)
T ss_dssp HHHHHHHHHTTSS
T ss_pred HHHHHHHHHhCcc
Confidence 7766666666764
No 50
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=90.96 E-value=1.2 Score=46.96 Aligned_cols=83 Identities=12% Similarity=0.140 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
.+.++++++.+.++-.+.+.++...+. ....+++|.++||.+.|..+++.+.+.+ |.+|.+|.. .+ +.++
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~---~g~~~~~i~~~GG~aks~~~~Qi~Adv~---g~pV~~~~~---~e-~~al 443 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKD---SGIDVQSLRVDGGAVKNNFIMQFQADIV---NTSVERPEI---QE-TTAL 443 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH---SSCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEESC---CC-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCcEEEEecchhcCHHHHHHHHHHh---CCceEecCC---Cc-chHH
Confidence 478898887777766555544332110 1234689999999999999999888876 678988762 33 4566
Q ss_pred HHHHHHHHHcCCC
Q 039172 407 AWTGIEHFCVGRF 419 (477)
Q Consensus 407 a~ag~~~~~~g~~ 419 (477)
|.|-+-.+..|..
T Consensus 444 GaA~la~~a~G~~ 456 (501)
T 3g25_A 444 GAAFLAGLAVGFW 456 (501)
T ss_dssp HHHHHHHHHTTSS
T ss_pred HHHHHHHHHhCcc
Confidence 7766666666765
No 51
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=90.85 E-value=1.3 Score=47.07 Aligned_cols=82 Identities=17% Similarity=0.258 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
.+.++++++.+.++-.+.+.++. ++ +....+++|.++||.+.|..+++.+.+.+ |.+|++|.. .+ +.++
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~~-l~---~~g~~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~~---~e-~~al 463 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLEL-IR---SLGASITRILLIGGGAKSEAIRTLAPSIL---GMDVTRPAT---DE-YVAI 463 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH-HH---HTTCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEECC---CC-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HH---HcCCCCCEEEEECchhcCHHHHHHHHHHh---CCceEecCC---cc-cHHH
Confidence 57899988888777665554433 22 22334689999999999999999988876 678888762 33 4556
Q ss_pred HHHHHHHHHcCCC
Q 039172 407 AWTGIEHFCVGRF 419 (477)
Q Consensus 407 a~ag~~~~~~g~~ 419 (477)
|.|-+-.+..|..
T Consensus 464 GAA~lA~~a~G~~ 476 (515)
T 3i8b_A 464 GAARQAAWVLSGE 476 (515)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCC
Confidence 6655555555553
No 52
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=90.65 E-value=1.6 Score=46.52 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=54.2
Q ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHH
Q 039172 327 SRANI---AASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNG 403 (477)
Q Consensus 327 ~~~dI---AasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNG 403 (477)
.+.++ .+++.+.++-.+-+. ++...+....+++|.++||.+.|..+++.+.+.+ |.+|.+|.. ..+
T Consensus 410 ~~~~l~r~~rAvlEgia~~~r~~----~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~---g~pV~~~~~----~e~ 478 (554)
T 3l0q_A 410 TPEDMALRYLATIQALALGTRHI----IETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT---GCAMLLPEE----SEA 478 (554)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH----HHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH---CCEEEEESC----SCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH----HHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh---CCeEEecCC----Ccc
Confidence 47788 445555554444433 3333222334689999999999999999888876 789999862 345
Q ss_pred HHHHHHHHHHHHcCCC
Q 039172 404 VMVAWTGIEHFCVGRF 419 (477)
Q Consensus 404 amIa~ag~~~~~~g~~ 419 (477)
.++|+|-+-.+..|..
T Consensus 479 ~alGAA~lA~~a~G~~ 494 (554)
T 3l0q_A 479 MLLGSAMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHcCCc
Confidence 5667665555556654
No 53
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=90.05 E-value=1.8 Score=45.63 Aligned_cols=83 Identities=12% Similarity=0.141 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
.+.++++++.+.++-.+.+.++...+.. ...++.|.++||.+.|..+++.+.+.+ |.+|.+|. ..+ +.++
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~---g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~---~~e-~~al 440 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADS---GIRLHALRVDGGAVANNFLMQFQSDIL---GTRVERPE---VRE-VTAL 440 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEEES---CCC-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCccEEEEeCchhcCHHHHHHHHHHh---CCceEecC---CCC-cHHH
Confidence 4788988888777665555443322110 235789999999999999999888876 67998876 233 4456
Q ss_pred HHHHHHHHHcCCC
Q 039172 407 AWTGIEHFCVGRF 419 (477)
Q Consensus 407 a~ag~~~~~~g~~ 419 (477)
|.|-+-.+..|..
T Consensus 441 GaA~lA~~a~G~~ 453 (510)
T 2p3r_A 441 GAAYLAGLAVGFW 453 (510)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHhCcc
Confidence 6665555555654
No 54
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=90.01 E-value=0.62 Score=49.29 Aligned_cols=79 Identities=13% Similarity=0.129 Sum_probs=56.1
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec-
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI- 152 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~- 152 (477)
++||||-+...+.++|+|.+|++++....+- ..+.+..|.+ +.....-.+.+...+++++ ++++...+|.+|+++.
T Consensus 6 ~~lgIDiGtts~k~~l~d~~G~il~~~~~~~-~~~~p~~g~~-e~dp~~~~~~~~~~i~~~~-~~~~~~~~I~~Igis~q 82 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRDGGLHFQRSIAL-ETYGDGNGPV-EQDAGDWYDAVQRIASSWW-QSGVDARRVSAIVLSGQ 82 (511)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEEC-CCBSTTSSCC-EECHHHHHHHHHHHHHHHH-TTTCCGGGEEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEECCCCCEEEEEEeec-ceecCCCCCE-EECHHHHHHHHHHHHHHHH-hcCCChhHeEEEEEecc
Confidence 7999999999999999999999988764321 1222223332 2233445666777888888 7888888999999884
Q ss_pred CCC
Q 039172 153 GPG 155 (477)
Q Consensus 153 GPG 155 (477)
+.+
T Consensus 83 ~~~ 85 (511)
T 3hz6_A 83 MQN 85 (511)
T ss_dssp CSC
T ss_pred ccc
Confidence 444
No 55
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=89.98 E-value=1.7 Score=45.82 Aligned_cols=76 Identities=29% Similarity=0.362 Sum_probs=54.1
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++||||-+...+.++|+|.+|+++......-...+.+.|.+ +.....-.+.+...++++++++++...+|.+|+++
T Consensus 3 ~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~--e~d~~~~~~~i~~~i~~~~~~~~~~~~~i~~Igis 78 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWV--EHNPEQIWNNVREVVGLALTRGNLTHEDIAAVGIT 78 (504)
T ss_dssp EEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCC--EECHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEE
T ss_pred EEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCce--eECHHHHHHHHHHHHHHHHHHcCCCcccEEEEEEe
Confidence 68999999999999999999998876643321111122222 22234445677788889999888888889999987
No 56
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=89.90 E-value=1.2 Score=46.73 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
.+.++++++.+.++-.+.+.++ ...+.. .+++|.++||.+.|..+++.+.+.+ |.+|++|.. .+ +.++
T Consensus 365 ~~~~l~rAvlEgia~~~~~~l~----~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~---~e-~~al 432 (497)
T 2zf5_O 365 GREHLARATLEAIAYLTRDVVD----EMEKLV-QIKELRVDGGATANDFLMQFQADIL---NRKVIRPVV---KE-TTAL 432 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH----HHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC---SC-HHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH----HHHhcC-CcceEEEeCccccCHHHHHHHHhhc---CCeEEEcCC---Cc-chHH
Confidence 4788988877777655554433 222222 5678999999999999999988876 678888763 33 5666
Q ss_pred HHHHHHHHHcCCC
Q 039172 407 AWTGIEHFCVGRF 419 (477)
Q Consensus 407 a~ag~~~~~~g~~ 419 (477)
|+|-+-.+..|..
T Consensus 433 GaA~lA~~~~g~~ 445 (497)
T 2zf5_O 433 GAAYLAGLAVDYW 445 (497)
T ss_dssp HHHHHHHHHTTSS
T ss_pred HHHHHHHHHhCcc
Confidence 7666555556653
No 57
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=89.83 E-value=1.2 Score=46.63 Aligned_cols=81 Identities=17% Similarity=0.213 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKI-EPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVM 405 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~-~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGam 405 (477)
.+.++++++.+.++-.+.+.++. ++ +. ...+++|.++||.+.|..+++.+.+.+ |.+|+++.. .+ +.+
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~-l~---~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~---g~pV~~~~~---~e-~~a 436 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLA-ME---EEAGVRLKVLKADGGMAQNRLFLKIQADLL---GVPVAVPEV---TE-TTA 436 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HH---TTTSCCCCCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC---SC-HHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HH---HhcCCCCcEEEEecccccCHHHHHHHHHHh---CCeeEecCC---cc-cHH
Confidence 47899988888777666555443 22 10 223578999999999999999998886 678887752 23 455
Q ss_pred HHHHHHHHHHcCC
Q 039172 406 VAWTGIEHFCVGR 418 (477)
Q Consensus 406 Ia~ag~~~~~~g~ 418 (477)
+|.|-+-.+..|.
T Consensus 437 lGaA~la~~a~G~ 449 (495)
T 2dpn_A 437 LGAALMAGVGAGA 449 (495)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHhhcCc
Confidence 5665544444454
No 58
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=89.60 E-value=1.5 Score=39.45 Aligned_cols=23 Identities=39% Similarity=0.549 Sum_probs=20.3
Q ss_pred cEEEEEecccccceEEEEecCCe
Q 039172 73 LIILGIETSCDDTAAAVVRGNGE 95 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~ 95 (477)
|.|||||-+...|+.++++.+|+
T Consensus 1 m~ILGIDPGl~~tG~gvi~~~g~ 23 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIRQVGR 23 (158)
T ss_dssp CEEEEEECCSSEEEEEEEEEETT
T ss_pred CEEEEEccCCCCeeEEEEEecCC
Confidence 78999999999999999986554
No 59
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=89.43 E-value=1.9 Score=45.37 Aligned_cols=84 Identities=12% Similarity=0.097 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-cEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHH
Q 039172 326 KSRANIAASFQRVAVLHLEERCERAIEWALKIEPSI-KHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGV 404 (477)
Q Consensus 326 ~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~-~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGa 404 (477)
..+.++++++.+.++-.+.+.++...+.. ...+ ++|.++||.+.|..+++.+.+.+ |.+|+++.. .+ +.
T Consensus 375 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~---g~~~~~~i~~~GG~a~s~~~~Q~~Adv~---g~pV~~~~~---~e-~~ 444 (503)
T 2w40_A 375 TERSHIVRALLEGIAFQLNEIVDSLTSDM---GIEMLHVLRCDGGMTKNKPFMQFNSDII---NTKIEVSKY---KE-VT 444 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCSCCSCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC---SC-HH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCccceEEEeCccccCHHHHHHHHHHH---CCeEEecCC---Cc-ch
Confidence 35789999888887766665544322111 2235 78999999999999999998886 678887752 23 45
Q ss_pred HHHHHHHHHHHcCCC
Q 039172 405 MVAWTGIEHFCVGRF 419 (477)
Q Consensus 405 mIa~ag~~~~~~g~~ 419 (477)
++|.|-+-.+..|..
T Consensus 445 alGaA~la~~~~G~~ 459 (503)
T 2w40_A 445 SLGAAVLAGLEVKIW 459 (503)
T ss_dssp HHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCcc
Confidence 567665555555653
No 60
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=89.21 E-value=1.7 Score=45.82 Aligned_cols=83 Identities=12% Similarity=0.152 Sum_probs=58.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHH
Q 039172 326 KSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVM 405 (477)
Q Consensus 326 ~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGam 405 (477)
..+.++++++.+.++-.+.+.++. ..+....+++|.++||.+.|..+++.+.+.+ |.+|.+|.. .+ +.+
T Consensus 363 ~~~~~l~RAvlEgia~~~r~~~~~----l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~---~e-~~a 431 (504)
T 3ll3_A 363 HQKPEMARAVIEGIIFNLYDAASN----LIKNTKKPVAINATGGFLKSDFVRQLCANIF---NVPIVTMKE---QQ-SGT 431 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH----HHTTSCCCSEEEEESGGGCSHHHHHHHHHHH---TSCEEEESC---SC-HHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH----HHHcCCCCCEEEEeCchhcCHHHHHHHHHhh---CCeEEecCC---CC-chh
Confidence 357899988888776655554432 2222234689999999999999999888876 678888752 33 566
Q ss_pred HHHHHHHHHHcCCC
Q 039172 406 VAWTGIEHFCVGRF 419 (477)
Q Consensus 406 Ia~ag~~~~~~g~~ 419 (477)
+|.|-+-.+..|..
T Consensus 432 lGaA~lA~~a~G~~ 445 (504)
T 3ll3_A 432 LAAMFLARQALGLN 445 (504)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHcCcc
Confidence 77776666666764
No 61
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=89.13 E-value=0.63 Score=49.04 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=52.9
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHC--CCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKA--NLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~a--gi~~~did~IAvt 151 (477)
++||||-....+.++|+|.+|+++......-...+.+.|.+ +.....-.+.+...++++++++ ++...+|.+|+++
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~--e~d~~~~~~~i~~~i~~~~~~~~~~~~~~~i~~Igis 82 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWY--EHDPIEIMTNLYNLMNEGIKVLKDKYTSVIIKCIGIT 82 (503)
T ss_dssp EEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCC--EECHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEE
T ss_pred EEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcE--EECHHHHHHHHHHHHHHHHHHhhcCCCccceEEEEEc
Confidence 68999999999999999999998876543211111222222 2223344566777888888876 7777789999987
Q ss_pred c
Q 039172 152 I 152 (477)
Q Consensus 152 ~ 152 (477)
.
T Consensus 83 ~ 83 (503)
T 2w40_A 83 N 83 (503)
T ss_dssp E
T ss_pred C
Confidence 3
No 62
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=89.07 E-value=0.81 Score=48.24 Aligned_cols=84 Identities=15% Similarity=0.188 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHH
Q 039172 326 KSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVM 405 (477)
Q Consensus 326 ~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGam 405 (477)
..+.++++++.+.++-.+.+.++...+.. ...+++|.++||.+.|..+++.+.+.+ |.+|++|.. . .+.+
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~---g~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~---~-e~~a 441 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADS---GVDLTELRVDGGMVANELLMQFQADQL---GVDVVRPKV---A-ETTA 441 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH---SCCCCEEEEESGGGGCHHHHHHHHHHH---TSCEEEESC---S-CHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcceEEEeCCcccCHHHHHHHHHHh---CCeEEeCCC---C-cchH
Confidence 35789999888887766665544322111 234688999999999999999888886 678887753 2 3455
Q ss_pred HHHHHHHHHHcCCC
Q 039172 406 VAWTGIEHFCVGRF 419 (477)
Q Consensus 406 Ia~ag~~~~~~g~~ 419 (477)
+|.|-+-.+..|..
T Consensus 442 lGaA~lA~~~~G~~ 455 (504)
T 2d4w_A 442 LGAAYAAGIAVGFW 455 (504)
T ss_dssp HHHHHHHHHHHTSS
T ss_pred HHHHHHHHhhcCcc
Confidence 66665555555653
No 63
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=89.02 E-value=1.7 Score=45.28 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHH
Q 039172 326 KSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVM 405 (477)
Q Consensus 326 ~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGam 405 (477)
..+.++++++.+.++-.+.+.++...+.. ...+++|.++||.+.|..+++.+.+.+ |.+|..++ ..+..
T Consensus 362 ~t~~~l~RAvlEgia~~~r~~~~~l~~~~---g~~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~-----~e~~a 430 (489)
T 2uyt_A 362 ESDAELARCIFDSLALLYADVLHELAQLR---GEDFSQLHIVGGGCQNTLLNQLCADAC---GIRVIAGP-----VEAST 430 (489)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCCCSEEEEESGGGGCHHHHHHHHHHH---TSEEEECC-----TTHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEeCChhhhHHHHHHHHHHH---CCeeecCC-----ccHhH
Confidence 35788988888877766655544322101 234689999999999999999888876 67888764 24566
Q ss_pred HHHHHHHHHHcC
Q 039172 406 VAWTGIEHFCVG 417 (477)
Q Consensus 406 Ia~ag~~~~~~g 417 (477)
+|.+.+-.+..+
T Consensus 431 lGaa~~A~~a~~ 442 (489)
T 2uyt_A 431 LGNIGIQLMTLD 442 (489)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 777655555443
No 64
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=88.90 E-value=1.4 Score=46.10 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=56.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHH
Q 039172 326 KSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVM 405 (477)
Q Consensus 326 ~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGam 405 (477)
..+.++++++.+.++-.+.+.++. ++ +....+++|.++||.+.|..+++.+.+.+ |.+|.+|+. .+.+.+
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~~~~-l~---~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~---g~pV~~~~~---~e~~~a 425 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADGMDV-VH---ACGIKPQSVTLIGGGARSEYWRQMLADIS---GQQLDYRTG---GDVGPA 425 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-HH---TTTCCCSCEEEESGGGCCHHHHHHHHHHH---CCCEEEESC---TTSCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HH---HcCCCcceEEEEeccccCHHHHHHHHHHh---CCeEEeCCC---CCcccH
Confidence 357899988888876665554433 22 21234578999999999999999998886 678988873 333345
Q ss_pred HHHHHHHHHHcCCC
Q 039172 406 VAWTGIEHFCVGRF 419 (477)
Q Consensus 406 Ia~ag~~~~~~g~~ 419 (477)
+|+|-+-.+..|..
T Consensus 426 lGAA~lA~~~~g~~ 439 (484)
T 2itm_A 426 LGAARLAQIAANPE 439 (484)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCc
Confidence 55554444444543
No 65
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=88.88 E-value=1.4 Score=40.09 Aligned_cols=23 Identities=22% Similarity=0.450 Sum_probs=20.7
Q ss_pred cEEEEEecccccceEEEEecCCe
Q 039172 73 LIILGIETSCDDTAAAVVRGNGE 95 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~ 95 (477)
|.|||||-+...|+.++++.+|.
T Consensus 1 MrILGIDPGl~~tG~gvi~~~g~ 23 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAVEGK 23 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEECSS
T ss_pred CEEEEEccccCceEEEEEEecCC
Confidence 78999999999999999987664
No 66
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=88.63 E-value=0.58 Score=52.36 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=76.6
Q ss_pred cccccchhhhHHHHHHHHcCCC----CCCCChhHHHHhhhcCCCccccccccccCCCCceeecchHHHHHHHHHHhhcCC
Q 039172 237 GTTIDDAIGEAFDKTAKWLGLD----MRRSGGPAVEKLALEGDAESVKFSTPMKQHKDCNFSYAGLKTQVRLAIESKNID 312 (477)
Q Consensus 237 g~t~D~S~Ge~fDkvAr~LGl~----~~~~gG~~iE~LA~~g~~~~~~fp~p~~~~~~~~fSFSGlktav~~~i~~~~~~ 312 (477)
+.+.++|+|++||++|.+||+. |+++....+|.+|..+.. .+.++.++. +..+++..+...+...+....
T Consensus 604 n~p~tSS~GRlFDavAallGl~~~~sYEGqaAm~LE~la~~~~~-~~~~~~~~~---~~~id~~~l~~~~~~~l~~~~-- 677 (772)
T 4g9i_A 604 NTAYASSTGRVLDAIAVLLNVAYRRHYEGEPAMKLESFAFKGKN-DLKFEVPVE---GELIRVEELFQSILEAIEGAS-- 677 (772)
T ss_dssp SCEEEEEHHHHHHHHHHSSSSCCSCCSSSCHHHHHHHHHHTCCS-CCCCCCCCB---TTBBCHHHHHHHHHHHHTTSC--
T ss_pred CCccccccchhhHHHHHHcCCcccccccchhhHHHHHhhhhccc-ccCCCcCcc---ccccchHHHHHHHHhhhcCCC--
Confidence 4567899999999999999995 552233567889876653 223333332 223444444444332221100
Q ss_pred CCCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEE
Q 039172 313 SRIPISSTSCQDRKSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLV 392 (477)
Q Consensus 313 ~~~~~~~~~~~~~~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~ 392 (477)
...-...+=..+.+.+++.+....++.-....-..-|+ +==..+|..+++.+++.--+--++-.
T Consensus 678 -----------~~dIAasfQ~al~~~L~~~~~~a~~~tg~~~VvLSGGV-----a~N~~L~~~l~~~L~~~G~~v~~p~~ 741 (772)
T 4g9i_A 678 -----------PADIAYSAHLALARAFAHTAVERAREFGVKNVALSGGV-----AYNELITKMIRKVVEANGLNFHVTTE 741 (772)
T ss_dssp -----------HHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCCCEESST-----TCCHHHHHHHHHHGGGSSCCCCCCTT
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEEchH-----HHHHHHHHHHHHHHHHCCCEEEccCC
Confidence 00112334445555555554444333211000001122 00134577777766553211112222
Q ss_pred cCCCCCC-CcHHHHHHHHHHHHHHcC
Q 039172 393 CPPPSLC-TDNGVMVAWTGIEHFCVG 417 (477)
Q Consensus 393 ~Pp~~~c-tDNGamIa~ag~~~~~~g 417 (477)
+|+..-. .=+.+|||++.++.+...
T Consensus 742 vP~nDgGiALGQA~iA~~~L~~~l~~ 767 (772)
T 4g9i_A 742 VPRGDNGVNVGQAFLGGLYLEGYLTK 767 (772)
T ss_dssp SCSSGGGHHHHHHHHHHHHHHTSSCT
T ss_pred CCCCcchHHHHHHHHHHHHHhccCch
Confidence 4443222 224578888888876653
No 67
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=88.50 E-value=2.7 Score=44.36 Aligned_cols=80 Identities=20% Similarity=0.132 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEE-EcCCCCCCCcHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQL-VCPPPSLCTDNGVM 405 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l-~~Pp~~~ctDNGam 405 (477)
.+.++++++.+.++-.+.+.+ +...+ .. +++|.++||.+.|..+++.+.+.+ |.+| ++|. ...+.+
T Consensus 375 ~~~~l~RAvlEgia~~~~~~~----~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~----~~e~~a 441 (511)
T 3hz6_A 375 TRAQILLAVLEGAALSLRWCA----ELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL---NVSLLVKPD----AHLHPL 441 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH----HHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH---TCEEEECCC----GGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH----HHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH---CCeeEEecC----CCCchH
Confidence 478888887777765555443 32222 23 789999999999999999888876 6799 8876 345666
Q ss_pred HHHHHHHHHHcCCC
Q 039172 406 VAWTGIEHFCVGRF 419 (477)
Q Consensus 406 Ia~ag~~~~~~g~~ 419 (477)
+|.|-+-.+..|..
T Consensus 442 lGaA~lA~~a~G~~ 455 (511)
T 3hz6_A 442 RGLAALAAVELEWS 455 (511)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHhCCc
Confidence 77776666666654
No 68
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=88.30 E-value=1.6 Score=46.30 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKI----EPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDN 402 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~----~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDN 402 (477)
.+.++++++.+.++-.+.+.++.. + +. . .+++|.++||.+.|..+++.+.+.+ |.+|.+|.. .+
T Consensus 393 ~~~~l~RAvlEgia~~~r~~l~~l-~---~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvl---g~pV~~~~~---~e- 460 (520)
T 4e1j_A 393 GPAEFARAALEAVCYQTRDLLEAM-H---KDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLL---DAPVDRPVI---LE- 460 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH-H---HHCC------CCEEEESGGGGCHHHHHHHHHHH---TSCEEEESC---CC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-H---HhhccCC-CcceEEEeCccccCHHHHHHHHHHh---CCeEEecCC---Cc-
Confidence 478898888887766555444332 2 21 2 4678999999999999999988876 678888752 33
Q ss_pred HHHHHHHHHHHHHcCCC
Q 039172 403 GVMVAWTGIEHFCVGRF 419 (477)
Q Consensus 403 GamIa~ag~~~~~~g~~ 419 (477)
+.++|+|-+-.+..|..
T Consensus 461 ~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 461 TTALGVAWLAGSRAGVW 477 (520)
T ss_dssp HHHHHHHHHHHHHHTSS
T ss_pred cHHHHHHHHHHHHcCCc
Confidence 45566665555555654
No 69
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=87.89 E-value=0.9 Score=48.75 Aligned_cols=81 Identities=7% Similarity=0.121 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhH-hhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHH
Q 039172 326 KSRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVA-SNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGV 404 (477)
Q Consensus 326 ~~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA-~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGa 404 (477)
..+.++++++.+.++-.+.+.++. ++ +....+++|.++||.+ .|..+++.+.+.+ |.+|.+|.. ..+.
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~~~-l~---~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~---g~pV~~~~~----~e~~ 477 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIVDA-FH---GRGVEVHELYACGGLPQKNHLLMQIFADVT---NREIKVAAS----KQTP 477 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-HH---TTTCCEEEEEEESSHHHHCHHHHHHHHHHH---TSCEEEBCC----SSHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HH---HcCCCcCEEEEEcCchhhCHHHHHHHHHHH---CCeeEecCC----CccH
Confidence 357899888888776665554432 22 2123467899999999 9999999988876 678888763 3345
Q ss_pred HHHHHHHHHHHcC
Q 039172 405 MVAWTGIEHFCVG 417 (477)
Q Consensus 405 mIa~ag~~~~~~g 417 (477)
++|.|-+-.+..|
T Consensus 478 alGaA~lA~~a~G 490 (572)
T 3jvp_A 478 ALGAAMFASVAAG 490 (572)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC
Confidence 5666555445555
No 70
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=87.53 E-value=1.2 Score=47.07 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=52.5
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.++||||-+...+.++|+|.+|++++....+- ..+.+..|.+ +.....-.+.+...+++++++.+ .+|.+|+++.
T Consensus 4 ~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~-~~~~p~~g~~-e~dp~~~~~~~~~~i~~~~~~~~---~~I~~Igis~ 78 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDINGKAVASVSKGY-PLIQTKVGQA-EEDPKLIFDAVQEIIFDLTQKID---GKIAAISWSS 78 (504)
T ss_dssp EEEEEEEECSSEEEEEEEETTSCEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHTCS---SEEEEEEEEE
T ss_pred CEEEEEEecCCceEEEEEcCCCCEEEEEEeec-ceecCCCCcE-EECHHHHHHHHHHHHHHHHHhCC---CCeEEEEEEC
Confidence 47999999999999999999999988764421 1111222321 22234445666777888888766 6899999874
Q ss_pred -CCC
Q 039172 153 -GPG 155 (477)
Q Consensus 153 -GPG 155 (477)
+.+
T Consensus 79 q~~~ 82 (504)
T 3ll3_A 79 QMHS 82 (504)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 443
No 71
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=87.31 E-value=2 Score=41.74 Aligned_cols=66 Identities=17% Similarity=0.233 Sum_probs=45.9
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe-
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT- 151 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt- 151 (477)
+++|+||-....+.+++++ +++++.....+ .. .+-.+.+...+.+++++.++++++|+.|+++
T Consensus 2 ~MlL~IDIGNT~iK~gl~d-~~~l~~~~r~~-------------T~--~~t~de~~~~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 2 SLILCIDVGNSHIYGGVFD-GDEIKLRFRHT-------------SK--VSTSDELGIFLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp -CEEEEEECSSEEEEEEEE-TTEEEEEEEEE-------------CS--CCCHHHHHHHHHHHHHTTTCCGGGCCEEEEEE
T ss_pred ceEEEEEECCCeEEEEEEE-CCEEEEEEEec-------------CC--CCCHHHHHHHHHHHHHHcCCChhhceEEEEec
Confidence 3689999999999999999 46776544321 00 0011234557788889999988999988866
Q ss_pred cCC
Q 039172 152 IGP 154 (477)
Q Consensus 152 ~GP 154 (477)
.+|
T Consensus 66 Vvp 68 (266)
T 3djc_A 66 VVP 68 (266)
T ss_dssp SCH
T ss_pred chH
Confidence 444
No 72
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=86.36 E-value=1.4 Score=39.10 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=54.3
Q ss_pred cEEEEEecccccceEEEEecCCeEEE--EeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEE
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILS--QVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAV 150 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~--~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAv 150 (477)
|.|||||-....+++|+.|..|.+.. ..+.. .. ...+.+...+.+++++. +++.|+|
T Consensus 3 mriLGiDpG~~riGvAv~d~~g~~a~p~~~I~~--------------~~--~r~~~~~~~l~~li~~~-----~~~~ivV 61 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMGWTAQGIETIKI--------------NE--AEGDYGLSRLSELIKDY-----TIDKIVL 61 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTSSSEEEEEEEEC--------------BG--GGTBCCHHHHHHHHTTS-----EEEEEEE
T ss_pred CEEEEEEccCCEEEEEEEECCCCEEeeEEEEEc--------------CC--cchHHHHHHHHHHHHHc-----CCCEEEE
Confidence 78999999999999999997776543 12211 00 01123345566666643 6889998
Q ss_pred e-----cCCCcchhhHHH--HHHHHHHHhhcCCCEEEec
Q 039172 151 T-----IGPGLSLCLRVG--VQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 151 t-----~GPG~~t~LrvG--~~~Ak~La~~~~~Pli~V~ 182 (477)
. .|-. +...+ -.|++.|+...++|++-|+
T Consensus 62 GlP~~~nGt~---~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 62 GFPKNMNGTV---GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp ECCCCBTTBC---CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eeeecCCcch---hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 8 4433 22322 3566667666789998854
No 73
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=86.32 E-value=11 Score=35.65 Aligned_cols=112 Identities=17% Similarity=0.242 Sum_probs=66.7
Q ss_pred CCCcEEEEEecccccceEEEEecC-CeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEE
Q 039172 70 KDDLIILGIETSCDDTAAAVVRGN-GEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAV 148 (477)
Q Consensus 70 ~~~m~iLgIeTS~ddtsvAlv~~d-g~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~I 148 (477)
...|++||||-..+.+.++++|.+ |+++.....- .. . +......-.+.+..++++++++.+. ...+.+|
T Consensus 9 ~~~~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~--~~--~-----~~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~i 78 (267)
T 1woq_A 9 HKNAPLIGIDIGGTGIKGGIVDLKKGKLLGERFRV--PT--P-----QPATPESVAEAVALVVAELSARPEA-PAAGSPV 78 (267)
T ss_dssp --CCCEEEEEECSSEEEEEEEETTTTEEEEEEEEE--EC--C-----SSCCHHHHHHHHHHHHHHHHTSTTC-CCTTCCE
T ss_pred CCCCEEEEEEECCCEEEEEEEECCCCeEEEEEEec--CC--C-----ccCCHHHHHHHHHHHHHHHHHhccc-cCccceE
Confidence 345789999999999999999965 7777432110 00 0 0011223345566677777664431 2234556
Q ss_pred EEecCCCcch------------hhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 149 AVTIGPGLSL------------CLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 149 Avt~GPG~~t------------~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
++.. ||.+. +.+ ++.+++.|...+++|++-.|-..+-+++-+.
T Consensus 79 gi~~-pG~v~~g~v~~~~~l~~~w~-~~~l~~~l~~~~~~pV~v~NDanaaalaE~~ 133 (267)
T 1woq_A 79 GVTF-PGIIQHGVVHSAANVDKSWL-NTDIDALLTARLGRPVEVINDADAAGLAEAR 133 (267)
T ss_dssp EEEE-SSCEETTEECCCTTSCGGGT-TCBHHHHHHHHHTSCEEEEEHHHHHHHHHHH
T ss_pred EEEc-cceEcCCEEEeCCCCCCCCC-CCCHHHHHHHHHCCCEEEeehhHHHHHHHHH
Confidence 6553 44321 121 3456677888889999888888777766543
No 74
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=84.80 E-value=6.4 Score=38.41 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=63.7
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.|++||||-....+.++++|.+|+++...... .... +.+...+.+.+++ .++.+|+++
T Consensus 2 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~-------------t~~~----~~~l~~i~~~~~~-----~~i~gigi~ 59 (302)
T 3epq_A 2 NAMLGGIEAGGTXFVCAVGREDGTIIDRIEFP-------------TXMP----DETIEXVIQYFSQ-----FSLQAIGIG 59 (302)
T ss_dssp -CCEEEEEECSSEEEEEEECTTSCEEEEEEEE-------------CCCH----HHHHHHHHHHHTT-----SCCSEEEEE
T ss_pred CcEEEEEEECcceeEEEEEECCCcEEEEEEec-------------CCCh----HHHHHHHHHHhcc-----CCceEEEEE
Confidence 46799999999999999999899988754321 1111 1222333344432 368888887
Q ss_pred cCCCcch--------h-hH-------HHHHHHHHHHhhcCCCEEEeccHHHHHHHHHH
Q 039172 152 IGPGLSL--------C-LR-------VGVQKARKIAGQFNLPIVGVHHMEAHALVARQ 193 (477)
Q Consensus 152 ~GPG~~t--------~-Lr-------vG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~ 193 (477)
. ||.+. + +. -++.+.+.|...+++|++-.|-..+.+++-+.
T Consensus 60 ~-pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~ 116 (302)
T 3epq_A 60 S-FGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFL 116 (302)
T ss_dssp E-CSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHH
T ss_pred e-ceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHH
Confidence 4 44321 1 00 13456788888899999888887777766544
No 75
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=84.09 E-value=3.4 Score=43.84 Aligned_cols=80 Identities=10% Similarity=-0.007 Sum_probs=52.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHH
Q 039172 327 SRANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMV 406 (477)
Q Consensus 327 ~~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamI 406 (477)
.+.++++++.+.++-.+-+.+ +...+....+++|.++||.+.|..+++.+.+.+ |.+|.+|.. ..+.++
T Consensus 405 ~~~~l~RAvlEgia~~~r~~~----~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~---g~pV~~~~~----~e~~al 473 (538)
T 4bc3_A 405 PGDVEVRALIEGQFMAKRIHA----EGLGYRVMSKTKILATGGASHNREILQVLADVF---DAPVYVIDT----ANSACV 473 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH----HHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH---TSCEEECCC----TTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH----HHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh---CCceEecCC----CCchHH
Confidence 468888888887766554433 222221223578999999999999999888876 678998863 234445
Q ss_pred HHHHHHHHHcC
Q 039172 407 AWTGIEHFCVG 417 (477)
Q Consensus 407 a~ag~~~~~~g 417 (477)
|.|-+-.+-.|
T Consensus 474 GaA~lA~~a~G 484 (538)
T 4bc3_A 474 GSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 54433333333
No 76
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=84.06 E-value=3.7 Score=43.93 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=51.4
Q ss_pred cEEEEEecccccceEEEEec-CCeEEEEeeehhhh----hhhhc------CCccchhcHHHHHHhHHHHHHHHHHHCCCC
Q 039172 73 LIILGIETSCDDTAAAVVRG-NGEILSQVVSSQAD----LLAKY------GGVAPKMAEEAHSLAIDPVVQEALHKANLT 141 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~-dg~il~~~~~sq~~----~h~~~------gGv~P~~a~~~H~~~l~~~i~~~L~~agi~ 141 (477)
.++||||-++..+.++|+|. +|++++....+-.. .+.+. .|.+ +.....-.+.+...++++++++++.
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-eqdp~~~~~~~~~~i~~~l~~~~~~ 83 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWA-LQHPLDYVEVLTTSVPAVMKESGVD 83 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCC-EECHHHHHHHHTTHHHHHHHC---C
T ss_pred CEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcE-EECHHHHHHHHHHHHHHHHHHcCCC
Confidence 47999999999999999997 99998876543110 11111 1211 1222233456677888999998988
Q ss_pred CCCcCEEEEec
Q 039172 142 ERDLSAVAVTI 152 (477)
Q Consensus 142 ~~did~IAvt~ 152 (477)
..+|.+|+++.
T Consensus 84 ~~~I~~Igis~ 94 (572)
T 3jvp_A 84 ADDVIGIGVDF 94 (572)
T ss_dssp CSCEEEEEEEE
T ss_pred hhHEEEEEEec
Confidence 88999999874
No 77
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=82.17 E-value=3.2 Score=43.26 Aligned_cols=73 Identities=12% Similarity=0.163 Sum_probs=49.4
Q ss_pred EEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 75 iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+||||-+...+.++|+|.+|+++......- ..+.+..|.+ +.....-.+.+...+++++++.+ .++|.+|+++
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~-~~~~p~~g~~-e~d~~~~~~~i~~~i~~~~~~~~--~~~i~~Igis 74 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEVVAAQTEKL-TVSRPHPLWS-EQDPEQWWQATDRAMKALGDQHS--LQDVKALGIA 74 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEEC-CCBCSSTTCC-EECHHHHHHHHHHHHHHHHHHSC--CTTCCEEEEE
T ss_pred EEEEEecCcccEEEEECCCCCEEEEEEecc-ccccCCCCCE-eECHHHHHHHHHHHHHHHHHhCC--ccceEEEEEc
Confidence 699999999999999999999987754321 1111112222 22334456677778888877753 5689999987
No 78
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=81.60 E-value=3.6 Score=43.55 Aligned_cols=67 Identities=22% Similarity=0.175 Sum_probs=48.5
Q ss_pred cEEEEEecccccceEEEEe-cCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 73 LIILGIETSCDDTAAAVVR-GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~-~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.++||||-+...+.++|+| .+|+++...... |.|.+ +. ..+.+...+.+++++++. ..+|.+|+++
T Consensus 5 ~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~-------~~g~~-e~----d~~~~~~~i~~~l~~~~~-~~~I~~Igis 71 (515)
T 3i8b_A 5 TLVAGVDTSTQSCKVRVTDAETGELVRFGQAK-------HPNGT-SV----DPSYWWSAFQEAAEQAGG-LDDVSALAVG 71 (515)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEE-------CCSSS-EE----CTHHHHHHHHHHHHHTTC-STTEEEEEEE
T ss_pred cEEEEEEeccccEEEEEEECCCCeEEEEEEEe-------CCCCc-eE----CHHHHHHHHHHHHHhcCC-ccCceEEEEe
Confidence 4799999999999999999 899999876432 22211 11 123455567788888876 5889999987
Q ss_pred c
Q 039172 152 I 152 (477)
Q Consensus 152 ~ 152 (477)
.
T Consensus 72 ~ 72 (515)
T 3i8b_A 72 G 72 (515)
T ss_dssp E
T ss_pred C
Confidence 3
No 79
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=80.98 E-value=3.2 Score=41.73 Aligned_cols=70 Identities=17% Similarity=0.073 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHHHHH
Q 039172 341 LHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFC 415 (477)
Q Consensus 341 ~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~~~~ 415 (477)
+.+.+.+.++++.+......++.|+++||-+....+++.|++.+. +.++..++ --|.++.+|++-+-.+.
T Consensus 332 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~~a~~l 401 (404)
T 3i33_A 332 RGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAIL 401 (404)
T ss_dssp HHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTT--TCCCBCSS---CTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcC--CCCCCCCc---CHHHHHHHHHHHHHHHh
Confidence 334445555555332212356889999999999999999999863 34444443 24567777776544333
No 80
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=78.52 E-value=67 Score=33.38 Aligned_cols=114 Identities=9% Similarity=0.002 Sum_probs=64.3
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchh----cHHHHHHhHHHHHHHHHHHCCCCCCCcCE
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKM----AEEAHSLAIDPVVQEALHKANLTERDLSA 147 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~----a~~~H~~~l~~~i~~~L~~agi~~~did~ 147 (477)
.-..||||-....+-+++++.+|++-......+. ..|.. ....-...|...|++.+++.+....+.-.
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~--------~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~~~~~~ 131 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRS--------LAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSXAGSVP 131 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEE--------CCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSCSSCEE
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEE--------EcCCccCCCCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 3357999999999999999877876222211110 01222 33455667778888888775543333333
Q ss_pred EEEe-cCCCcchhhH------H--HH------HHHHHHHhhc---CCC---EEEeccHHHHHHHHHH
Q 039172 148 VAVT-IGPGLSLCLR------V--GV------QKARKIAGQF---NLP---IVGVHHMEAHALVARQ 193 (477)
Q Consensus 148 IAvt-~GPG~~t~Lr------v--G~------~~Ak~La~~~---~~P---li~V~H~~AHa~sa~~ 193 (477)
++++ .+|+.-+.+. - |. .+.+.|...+ ++| +.-+|--.+-+++..+
T Consensus 132 lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~ 198 (457)
T 2yhx_A 132 LGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNY 198 (457)
T ss_dssp EEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred eeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcCCcceeEEEEecchhhccchhh
Confidence 4444 3566411111 1 11 3334454555 678 6667776666666555
No 81
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=78.30 E-value=4.4 Score=40.33 Aligned_cols=65 Identities=12% Similarity=0.052 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHH
Q 039172 341 LHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTG 410 (477)
Q Consensus 341 ~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag 410 (477)
+.+.+.+.++++.+......++.|+++||.+....+++.+.+.+. +.++..++ -.|.++.+|++-
T Consensus 324 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~--~~~v~~~~---~p~~ava~Gaa~ 388 (394)
T 3qfu_A 324 KKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFD--GKKASKGI---NPDEAVAYGAAV 388 (394)
T ss_dssp HHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTT--TCCCBCCS---CTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcC--CCCCCCCc---CHHHHHHHHHHH
Confidence 344455555555443212346899999999999999999999863 34454443 235566677653
No 82
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=77.58 E-value=1e+02 Score=34.93 Aligned_cols=110 Identities=11% Similarity=0.102 Sum_probs=60.6
Q ss_pred CcEEEEEecccccceEEEEecCCe----E-EEEeeehhhhhhhhcCCccch----hcHHHHHHhHHHHHHHHHHHCCCCC
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGE----I-LSQVVSSQADLLAKYGGVAPK----MAEEAHSLAIDPVVQEALHKANLTE 142 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~----i-l~~~~~sq~~~h~~~gGv~P~----~a~~~H~~~l~~~i~~~L~~agi~~ 142 (477)
....||||-....+-+++++.+|+ + +...... .|+ .....-.+.|...|++.+++.++..
T Consensus 77 ~G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~-----------ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~~ 145 (917)
T 1cza_N 77 KGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYD-----------TPENIVHGSGSQLFDHVAECLGDFMEKRKIKD 145 (917)
T ss_dssp CEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEEC-----------CCHHHHSSBHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred cceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEE-----------CCcccccCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 456799999999999999987665 4 2222111 122 1234445667778888887766543
Q ss_pred CCcCEEEEe-cCCCcch------------h--h--HHHHHHHHHHHhhcC----CC---EEEeccHHHHHHHHHH
Q 039172 143 RDLSAVAVT-IGPGLSL------------C--L--RVGVQKARKIAGQFN----LP---IVGVHHMEAHALVARQ 193 (477)
Q Consensus 143 ~did~IAvt-~GPG~~t------------~--L--rvG~~~Ak~La~~~~----~P---li~V~H~~AHa~sa~~ 193 (477)
+++ .++++ .+|+..+ + + -.|..+.+.|...++ +| +.-+|=-.+-+++..+
T Consensus 146 ~~~-~lGi~fs~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~ 219 (917)
T 1cza_N 146 KKL-PVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGY 219 (917)
T ss_dssp SCC-CEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHH
T ss_pred Ccc-cEEEEEccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhc
Confidence 322 23333 2444210 1 1 124445555555443 54 5556766666666554
No 83
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=77.51 E-value=6.2 Score=39.73 Aligned_cols=82 Identities=15% Similarity=0.147 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcC---CCCCCCcHHH
Q 039172 328 RANIAASFQRVAVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCP---PPSLCTDNGV 404 (477)
Q Consensus 328 ~~dIAasfQ~av~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~P---p~~~ctDNGa 404 (477)
..++...++. +++.+.+.+.++++.+......++.|+|+||-+.-..+++.+++.+.. ..++.-| ....-.|-++
T Consensus 313 r~~~~~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~-~~~v~~P~~~~~~~~p~~av 390 (409)
T 4gni_A 313 RLRYETIART-VFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPE-STRILAPSTDPSALNPSELQ 390 (409)
T ss_dssp HHHHHHHTHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCT-TSEEESTTTCTTCCCTTTHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCC-ccccccccccCCCcCHHHHH
Confidence 3344333333 334455556666654322123468999999999999999999998642 2356555 2334567778
Q ss_pred HHHHHHH
Q 039172 405 MVAWTGI 411 (477)
Q Consensus 405 mIa~ag~ 411 (477)
..|+|-+
T Consensus 391 a~GAa~~ 397 (409)
T 4gni_A 391 ARGAALQ 397 (409)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8886644
No 84
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=76.73 E-value=0.87 Score=47.60 Aligned_cols=78 Identities=8% Similarity=0.083 Sum_probs=44.7
Q ss_pred CcEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcH-HHHHHhHHHHHHHHHHHCCCCCCCcCEEEE
Q 039172 72 DLIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAE-EAHSLAIDPVVQEALHKANLTERDLSAVAV 150 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~-~~H~~~l~~~i~~~L~~agi~~~did~IAv 150 (477)
++++||||-+...+.++|+|.+|+++..... +.+..+.+..|.... ....+.+...+.+++++......+|.+|++
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~~g~~~~~~~~---~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~~~~i~~Igi 79 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARYERECRSLTLR---EIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAAGIAIDSIGI 79 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEEEGGGTEEEEE---EEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred cceEEEEEecCCCceEEEEEecCccceEEEE---EEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 4579999999999999999988876654322 122222233332110 011233444555555543223457999998
Q ss_pred ec
Q 039172 151 TI 152 (477)
Q Consensus 151 t~ 152 (477)
+.
T Consensus 80 s~ 81 (489)
T 2uyt_A 80 DT 81 (489)
T ss_dssp EE
T ss_pred ec
Confidence 75
No 85
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=76.71 E-value=5.7 Score=39.54 Aligned_cols=64 Identities=14% Similarity=0.037 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHH
Q 039172 341 LHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTG 410 (477)
Q Consensus 341 ~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag 410 (477)
+.+.+.+.++++.+.-....++.|+++||.+....+++++++.+. .++..++ -.|.++.+|++-
T Consensus 314 ~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~---~~v~~~~---~p~~ava~Gaa~ 377 (383)
T 1dkg_D 314 NRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFG---KEPRKDV---NPDEAVAIGAAV 377 (383)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHS---SCCBCSS---CTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhC---CCCCCCc---ChHHHHHHHHHH
Confidence 344555556665332112346899999999999999999999874 3444443 236677777653
No 86
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=76.43 E-value=8.5 Score=39.80 Aligned_cols=72 Identities=17% Similarity=0.155 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhH-hhHHHHHHHHHHHHcCCC-------------------------EEE
Q 039172 339 AVLHLEERCERAIEWALKIEPSIKHLVVSGGVA-SNKYVRARLDRAVKNNSL-------------------------QLV 392 (477)
Q Consensus 339 v~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA-~N~~Lr~~L~~~~~~~g~-------------------------~l~ 392 (477)
+.++++.++.+.+-.+...-.+++.||++||++ -+..+|+++.+.+...|+ +++
T Consensus 309 A~d~f~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~~~Is~~~s~v~V~ 388 (415)
T 2e1z_A 309 AIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICA 388 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTTGGGTCCBCHHHHHSCGGGCSEECBCTTCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhHhhcCccccHhHhcccccCCCceeeCCCCCceEE
Confidence 556777777766543322235799999999999 778899999888776662 444
Q ss_pred cCCCCCCCcHHHHHHHHHHHHH
Q 039172 393 CPPPSLCTDNGVMVAWTGIEHF 414 (477)
Q Consensus 393 ~Pp~~~ctDNGamIa~ag~~~~ 414 (477)
+= +||.=.|||..++..+
T Consensus 389 Vi----PtnEEl~IA~~~~~ll 406 (415)
T 2e1z_A 389 VI----PTNEEKMIALDAIHLG 406 (415)
T ss_dssp EC----CCCHHHHHHHHHHHHT
T ss_pred EE----CChHHHHHHHHHHHHh
Confidence 44 4899999998887665
No 87
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=75.31 E-value=12 Score=36.26 Aligned_cols=63 Identities=14% Similarity=0.223 Sum_probs=43.7
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
|+|.||.....+..++++ +++++.....+- . ..+-...+...+.++++..++.+.+++.|+++
T Consensus 1 MlL~IDIGNT~ik~gl~~-~~~l~~~~r~~T-------------~-~~~t~de~~~~l~~ll~~~~~~~~~i~~iiIS 63 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFE-EGELRQHWRMET-------------D-RHKTEDEYGMLVKQLLEHEGLSFEDVKGIIVS 63 (268)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEEC-------------C-TTCCHHHHHHHHHHHHHHTTCCGGGCCEEEEE
T ss_pred CEEEEEECcCcEEEEEEE-CCEEEEEEEecC-------------C-CcCCHHHHHHHHHHHHHHcCCCcccCcEEEEE
Confidence 379999999999999999 567765443210 0 01112344556788888899988899988765
No 88
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=74.80 E-value=10 Score=39.16 Aligned_cols=73 Identities=12% Similarity=0.138 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhH-hhHHHHHHHHHHHHcCCC-----------------------EEEcC
Q 039172 339 AVLHLEERCERAIEWALKIEPSIKHLVVSGGVA-SNKYVRARLDRAVKNNSL-----------------------QLVCP 394 (477)
Q Consensus 339 v~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA-~N~~Lr~~L~~~~~~~g~-----------------------~l~~P 394 (477)
+.++++.++.+.+-.+...-.+++.||++||++ -+..+|+++.+.+...|+ ++++=
T Consensus 301 A~d~f~yri~k~IGa~~a~LggvDaiVFTgGIGEns~~vR~~i~~~l~~lGi~lD~~~N~~~~~~~~Is~~~s~v~V~Vi 380 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNKIRGQEIDISTPDAKVRVFVI 380 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHHHHCHHHHHHHHTTCGGGTCCBCTTGGGCCSSCEECBCTTCSSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCEEEECccccccCHHHHHHHHhhhhhhCccccHhhhhccCccceecCCCCCceEEEE
Confidence 456666676665542221135799999999999 778889988887765552 34443
Q ss_pred CCCCCCcHHHHHHHHHHHHHH
Q 039172 395 PPSLCTDNGVMVAWTGIEHFC 415 (477)
Q Consensus 395 p~~~ctDNGamIa~ag~~~~~ 415 (477)
+||.=.|||..++..+.
T Consensus 381 ----Pt~Eel~IA~~~~~~l~ 397 (408)
T 1g99_A 381 ----PTNEELAIARETKEIVE 397 (408)
T ss_dssp ----CCCHHHHHHHHHHHHHH
T ss_pred ----CChHHHHHHHHHHHHHh
Confidence 48889999998887765
No 89
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=73.48 E-value=4.6 Score=41.62 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHH-HhhcCCCCcEEEEEchhHhh-HHHHHHHHHHHHcCCC
Q 039172 339 AVLHLEERCERAIEW-ALKIEPSIKHLVVSGGVASN-KYVRARLDRAVKNNSL 389 (477)
Q Consensus 339 v~~~L~~~~~ral~~-~~~~~~~~~~lvlsGGVA~N-~~Lr~~L~~~~~~~g~ 389 (477)
+.++++.++.+.+-. +-. -.|++.||++||++.| ..+|+++.+.++..|+
T Consensus 305 A~d~f~yri~k~IGa~aa~-L~GvDaIVFTgGIGEns~~vR~~i~~~l~~lGi 356 (404)
T 4h0o_A 305 AFDVYIKQLAKTIGGLMVE-IGGLDLLVFTDQMGLEVWQVRKAICDKMKFLGI 356 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTCCSEEEEEHHHHHHCHHHHHHHHHHTGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHH-hcCCCEEEECCccccCcHHHHHHHHhhhhhcCe
Confidence 345556666555431 112 2469999999999988 8899998887765554
No 90
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=72.95 E-value=7.9 Score=39.61 Aligned_cols=51 Identities=18% Similarity=0.308 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHH-hhcCCCCcEEEEEchhHhhH-HHHHHHHHHHHcCCCE
Q 039172 339 AVLHLEERCERAIEWA-LKIEPSIKHLVVSGGVASNK-YVRARLDRAVKNNSLQ 390 (477)
Q Consensus 339 v~~~L~~~~~ral~~~-~~~~~~~~~lvlsGGVA~N~-~Lr~~L~~~~~~~g~~ 390 (477)
+.++++.++.+.+-.+ -.+ .+++.||++||++-|+ .+|+++.+.++..|++
T Consensus 292 A~d~f~yri~k~IGa~aa~L-~gvDaIVFTgGIgEns~~iR~~i~~~l~~lGi~ 344 (384)
T 3khy_A 292 AIEIFSHRVAKFVASYMIYF-NKLDALVFTGGIGENAANIRKNIISKLANLGFM 344 (384)
T ss_dssp HHHHHHHHHHHHHHHHGGGC-SSCCEEEEEHHHHHHCHHHHHHHHHHTGGGTCC
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCEEEECCccccCcHHHHHHHHhhcccccEE
Confidence 4566777776665422 222 3899999999999775 5999998888766653
No 91
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=70.77 E-value=24 Score=28.82 Aligned_cols=88 Identities=5% Similarity=-0.070 Sum_probs=50.4
Q ss_pred cEEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
|.+||||-....+++|+-|..+.+ +.-.. +++.... +.....+.+.+++. +++.|+|..
T Consensus 1 mriLglD~G~kriGvAvsd~~~~~-A~pl~-----------ti~~~~~----~~~~~~l~~li~e~-----~v~~iVvGl 59 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEGVPL-ASGRG-----------YLVRKTL----EEDVEALLDFVRRE-----GLGKLVVGL 59 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSCCSS-CCCEE-----------EEECCCH----HHHHHHHHHHHHHH-----TCCEEEEEC
T ss_pred CcEEEEEeCCCEEEEEEEeCCCCe-eeeeE-----------EEEccCc----HHHHHHHHHHHHHc-----CCCEEEEee
Confidence 569999999999999999865533 21110 0100111 22233445555543 578898882
Q ss_pred ---CCCcch-hhHHHHHHHHHHHhhcCCCEEEec
Q 039172 153 ---GPGLSL-CLRVGVQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 153 ---GPG~~t-~LrvG~~~Ak~La~~~~~Pli~V~ 182 (477)
.-|..+ .-+....|++.|... ++|++-++
T Consensus 60 P~~mdGt~~~~~~~~~~f~~~L~~~-~lpV~~~D 92 (98)
T 1iv0_A 60 PLRTDLKESAQAGKVLPLVEALRAR-GVEVELWD 92 (98)
T ss_dssp CCCCCSSSCCCSSTTHHHHHHHHHT-TCEEEEEC
T ss_pred ccCCCCCcCHHHHHHHHHHHHHhcC-CCCEEEEC
Confidence 012211 112334678888877 88887765
No 92
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=68.31 E-value=3.6 Score=42.35 Aligned_cols=73 Identities=23% Similarity=0.256 Sum_probs=43.7
Q ss_pred cCCCCCcEEEEEecccccceEEEEecCCe-EEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCC--C
Q 039172 67 MSAKDDLIILGIETSCDDTAAAVVRGNGE-ILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTE--R 143 (477)
Q Consensus 67 ~~~~~~m~iLgIeTS~ddtsvAlv~~dg~-il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~--~ 143 (477)
.....+|+||.|++.+..+..+|++.+.+ ++..-..+++ | .. ....|.+.+. .|.+.|++.++.. +
T Consensus 17 ~~~~~m~~ILviN~GSSS~K~~l~~~~~~~~l~~g~~e~i------g-~~---~~~dh~~a~~-~il~~L~~~~~~~~~~ 85 (398)
T 4ijn_A 17 QGPGSMVTVLVVNSGSSSLKYAVVRPASGEFLADGIIEEI------G-SG---AVPDHDAALR-AAFDELAAAGLHLEDL 85 (398)
T ss_dssp -----CCEEEEEEECSSCEEEEEECTTTCCEEEEEEECST------T-BT---TBCSHHHHHH-HHHHHHHHTTCCGGGS
T ss_pred ccccccccEEEEeCCchhheEEEEECCCCceeeeeeeeec------C-CC---CccCHHHHHH-HHHHHHHHcCCCcccc
Confidence 34457889999999999999999985443 5554333321 1 11 1234555444 4455667777654 6
Q ss_pred CcCEEEE
Q 039172 144 DLSAVAV 150 (477)
Q Consensus 144 did~IAv 150 (477)
+|++|+.
T Consensus 86 ~i~aVGh 92 (398)
T 4ijn_A 86 DLKAVGH 92 (398)
T ss_dssp CEEEEEE
T ss_pred ceeEEec
Confidence 8888864
No 93
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=65.83 E-value=7.4 Score=37.48 Aligned_cols=97 Identities=25% Similarity=0.267 Sum_probs=49.7
Q ss_pred EEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchh-cHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 75 ILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKM-AEEAHSLAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 75 iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~-a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+||||-....+.++++| +|+++...... ...|.. ....-.+.+..+++++++ ..++..|++. -
T Consensus 2 ~lgiDiGGT~i~~~l~d-~g~il~~~~~~---------~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig-~ 65 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-NGAVIKRLGTK---------GINPFFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFY-G 65 (291)
T ss_dssp --CEECCTTCEEEEEEC-SSSEEEEEEEC---------CCCTTTSCSTTTTTTTTC------------------CEEE-C
T ss_pred EEEEEeccccEEEEEEc-CCeEEEEEECC---------CCCcccCCHHHHHHHHHHHHHHhcC-----cccccEEEEE-c
Confidence 79999999999999999 99988765321 100100 001112334444554442 2467777776 3
Q ss_pred CCcchhhHHHHHHHHHHHhhcC--CCEEEeccHHHHHH
Q 039172 154 PGLSLCLRVGVQKARKIAGQFN--LPIVGVHHMEAHAL 189 (477)
Q Consensus 154 PG~~t~LrvG~~~Ak~La~~~~--~Pli~V~H~~AHa~ 189 (477)
||.. -..+..+.+.|...++ +|+.-.|...+-++
T Consensus 66 pG~~--~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aal 101 (291)
T 1zxo_A 66 AGCT--PEKAPVLRRAIADSLPVIGNIKANSDMLAAAH 101 (291)
T ss_dssp TTCC--TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHH
T ss_pred CCCC--HHHHHHHHHHHHHhcCCCceEEEECcHHHHHH
Confidence 6643 1223456667777788 59887787766544
No 94
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=65.50 E-value=12 Score=39.34 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHHHHHcC
Q 039172 342 HLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVG 417 (477)
Q Consensus 342 ~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~~~~~g 417 (477)
.+.+.+.++++.+.-....++.|+++||-+....+++++++.+. .++..++ --|.++++|++-+-....|
T Consensus 284 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~---~~~~~~~---~p~~aVa~Gaa~~a~~l~~ 353 (509)
T 2v7y_A 284 RTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELG---KEPHKGV---NPDEVVAIGAAIQGGVIAG 353 (509)
T ss_dssp TTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHS---SCCBCCS---CTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhC---CCcCcCC---CchhhhHhhHHHHHHHhcC
Confidence 34445555555442112347899999999999999999999874 3333332 3467788887655444444
No 95
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=65.14 E-value=5.7 Score=40.80 Aligned_cols=72 Identities=17% Similarity=0.132 Sum_probs=44.2
Q ss_pred CCCcEEEEEecccccceEEEEec-CCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCC--CCcC
Q 039172 70 KDDLIILGIETSCDDTAAAVVRG-NGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTE--RDLS 146 (477)
Q Consensus 70 ~~~m~iLgIeTS~ddtsvAlv~~-dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~--~did 146 (477)
+..|+||.|++.+.....+|++. +.++++.-..+++ | . |+.....|.+.+..++ +.|++.++.. ++|+
T Consensus 9 ~~~M~iLviN~GSSSlK~~l~~~~~~~~l~~G~~e~i------g-~-~~~~~~~h~~a~~~il-~~L~~~~~~~~~~~i~ 79 (391)
T 3r9p_A 9 DGARRVLVINSGSSSLKFQLVDPEFGVAASTGIVERI------G-E-ESSPVPDHDAALRRAF-DMLAGDGVDLNTAGLV 79 (391)
T ss_dssp ---CEEEEEEECSSCEEEEEEETTTTEEEEEEEECCT------T-C-TTCSCCSHHHHHHHHH-HHHHHTTCCTTTTTEE
T ss_pred cCCceEEEEecCchhheeEEEecCCCceEEEEEEeec------C-C-CccCccCHHHHHHHHH-HHHHhcCCCCccccee
Confidence 45589999999999999999984 4456654443322 1 1 1222345766665444 5566676544 6888
Q ss_pred EEEE
Q 039172 147 AVAV 150 (477)
Q Consensus 147 ~IAv 150 (477)
+|+.
T Consensus 80 aVGh 83 (391)
T 3r9p_A 80 AVGH 83 (391)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8864
No 96
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=62.91 E-value=7.5 Score=40.76 Aligned_cols=69 Identities=10% Similarity=0.180 Sum_probs=43.5
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
++||||-....+.++|+|.+|+++.....+- ..+ +..|.+ |. ..+.+...+.+++++.- ..+|.+|+++
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~-~~~-~~~g~~-eq----dp~~~~~~~~~~i~~~~--~~~I~aIgis 75 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDGRMLDRQVRPS-IPL-EIDGIR-RL----DAPDTGRWLLDVLSRYA--DHPVTTIVPV 75 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTSCEEEEEEEEC-CCE-ESSSCE-EC----CHHHHHHHHHHHHHHTT--TSCCCEEEEE
T ss_pred eEEEEEcCCCCeEEEEEECCCcEEEEEEecC-Ccc-cCCCce-eE----CHHHHHHHHHHHHHHHH--hcCCCEEEEe
Confidence 7899999999999999999999987654331 111 112211 11 12344455556666553 2689999987
No 97
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=62.42 E-value=15 Score=39.60 Aligned_cols=73 Identities=15% Similarity=0.074 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHHHHHcCC
Q 039172 340 VLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVGR 418 (477)
Q Consensus 340 ~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~~~~~g~ 418 (477)
++.+.+.++++++.+.-....++.|+++||-+....+++.+.+.+. .++..+ .--|.+++.|+|-+-....|.
T Consensus 313 ~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg---~~~~~~---~nPdeaVA~GAai~a~~l~~~ 385 (605)
T 4b9q_A 313 VNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFG---KEPRKD---VNPDEAVAIGAAVQGGVLTGD 385 (605)
T ss_dssp HHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHT---SCCCSS---SCTTTHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhc---cCcCCC---cChhHHHHHhHHHHHHHhcCC
Confidence 3334445555555332112346899999999999999999999873 333332 235778888877555444454
No 98
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=61.94 E-value=29 Score=34.97 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=36.4
Q ss_pred HHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCE
Q 039172 128 DPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPI 178 (477)
Q Consensus 128 ~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pl 178 (477)
...|++.|+++|++++|+|.|... .+| .+|..+.+.|....+.|+
T Consensus 210 ~~ti~~~l~d~g~~~~d~D~ivtg-dL~-----q~g~~il~~l~~~~g~~~ 254 (347)
T 3lma_A 210 ADTIKQHLEDLGRTPDDYDLILTG-DLS-----GVGSPILKDLLKEEGINV 254 (347)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEEE-SCH-----HHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhCCCHHHcCEEecC-ChH-----HHHHHHHHHHHHHcCCCh
Confidence 356789999999999999999642 233 678888889998888886
No 99
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=57.87 E-value=37 Score=29.46 Aligned_cols=89 Identities=10% Similarity=0.095 Sum_probs=51.0
Q ss_pred EEEEEecccccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEEec-
Q 039172 74 IILGIETSCDDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAVTI- 152 (477)
Q Consensus 74 ~iLgIeTS~ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAvt~- 152 (477)
.+||||-....+++|+-|..+.+ +.-... ++.. ..+.....+.+.+++- +++.|+|..
T Consensus 4 ~iLglD~G~kriGvAvsd~~~~~-A~pl~t-----------i~~~----~~~~~~~~l~~li~e~-----~v~~iVvGlP 62 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRITGT-ARPLPA-----------IKAQ----DGTPDWNIIERLLKEW-----QPDEIIVGLP 62 (138)
T ss_dssp EEEEEECCSSEEEEEEEETTTTE-EEEEEE-----------EEEE----TTEECHHHHHHHHHHH-----CCSEEEEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCCCCE-EeeEEE-----------EEcC----CcchHHHHHHHHHHHc-----CCCEEEEecc
Confidence 59999999999999999976543 222111 0000 0011123445555543 578898882
Q ss_pred --CCCcch-hhHHHHHHHHHHHhhcCCCEEEecc
Q 039172 153 --GPGLSL-CLRVGVQKARKIAGQFNLPIVGVHH 183 (477)
Q Consensus 153 --GPG~~t-~LrvG~~~Ak~La~~~~~Pli~V~H 183 (477)
--|..+ .-+....|++.|...+++|++-|+.
T Consensus 63 ~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp ECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 012222 1123346788887777888877653
No 100
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=56.98 E-value=25 Score=30.90 Aligned_cols=51 Identities=18% Similarity=0.185 Sum_probs=36.7
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~ 182 (477)
+.|...|+++|+++|+.+.+|+.|+.-.-----.+| ..+|..+++|+..++
T Consensus 25 ~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL-------~~~A~~lg~pl~~~~ 75 (145)
T 2w6k_A 25 EHLRALLERTLGEHGRSLAELDALASIDGKRDEPGL-------RQLATLLERPVHFLA 75 (145)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHH-------HHHHHHHTSCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHH-------HHHHHHhCCCcEEeC
Confidence 346678999999999999999999965321111122 356778899998875
No 101
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=56.04 E-value=30 Score=34.39 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=57.5
Q ss_pred CcEEEEEecccccceEEEEec----CCeEEEEee-ehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCC-CCCc
Q 039172 72 DLIILGIETSCDDTAAAVVRG----NGEILSQVV-SSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLT-ERDL 145 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~----dg~il~~~~-~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~-~~di 145 (477)
++++||||-..+.+.++++|. +|+++.... .. ... .+.+...+.+.+++.... ..++
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~~~-------------~~~----~~~~~~~i~~~i~~~~~~~~~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMK-------------RKD----ITEIIEFFNEIIELMPASVMKRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEECT-------------TCB----GGGHHHHHHHHHHHSCHHHHTTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeeecC-------------CCC----HHHHHHHHHHHHHHHhhcccccc
Confidence 568999999999999999997 788876543 11 000 122333444444432211 2356
Q ss_pred CEEEEecCCCcchh--hH------HH-HHHHHHHHhhcCC-CEEEeccHHHHHHH
Q 039172 146 SAVAVTIGPGLSLC--LR------VG-VQKARKIAGQFNL-PIVGVHHMEAHALV 190 (477)
Q Consensus 146 d~IAvt~GPG~~t~--Lr------vG-~~~Ak~La~~~~~-Pli~V~H~~AHa~s 190 (477)
.+|++.. ||.... +. -+ +.+.+-+...+++ |++-.|-..+.+++
T Consensus 91 ~gigi~~-pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 91 KAGVINV-PGPVTGGAVGGPFNNLKGIARLSDYPKALFPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp EEEEEEE-SSCEETTTEECCCSSSBSCEEGGGSCTTTSCTTSEEEEEHHHHHHHH
T ss_pred cEEEEEe-eccccCCEEeccCCCCCCcCCHHHHHHHhcCCCCEEEEccHhHHhcc
Confidence 6776653 443221 00 01 1223333344677 99888988887766
No 102
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=55.49 E-value=13 Score=38.19 Aligned_cols=49 Identities=12% Similarity=0.130 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHH-hhcCCCCcEEEEEchhH-hhHHHHHHHHHHHHcCC
Q 039172 339 AVLHLEERCERAIEWA-LKIEPSIKHLVVSGGVA-SNKYVRARLDRAVKNNS 388 (477)
Q Consensus 339 v~~~L~~~~~ral~~~-~~~~~~~~~lvlsGGVA-~N~~Lr~~L~~~~~~~g 388 (477)
+.++++.++.+.+-.+ -.+ .+++.||++||++ -+..+|+++.+.+...|
T Consensus 301 A~d~f~yri~k~IGa~~a~L-ggvDaIVFTgGIGEns~~vR~~i~~~l~~lG 351 (403)
T 2iir_A 301 VLEIYDYRIAKYIGAYAAAM-NGVDAIVFTAGVGENSPITREDVCSYLEFLG 351 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TCCSEEEEEHHHHTTCHHHHHHHHHTTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCEEEECcccccCCHHHHHHHHhhhhhcc
Confidence 4566666666554322 222 3799999999999 77888898887765444
No 103
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=55.14 E-value=23 Score=37.03 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=27.9
Q ss_pred cEEEEEchhHhhHHHHHHHHHH-HHcCCCEEEcCCC
Q 039172 362 KHLVVSGGVASNKYVRARLDRA-VKNNSLQLVCPPP 396 (477)
Q Consensus 362 ~~lvlsGGVA~N~~Lr~~L~~~-~~~~g~~l~~Pp~ 396 (477)
++|.++||.+.|..+++.+.+. + |.+|.+|..
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv~~---g~pV~~~~~ 421 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASLRP---DCAVYTANA 421 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHST---TSEEEEESS
T ss_pred CeEEEeCCcccCHHHHHHHhhhcC---CCeEEEcCC
Confidence 7899999999999999988887 5 679998863
No 104
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=54.65 E-value=18 Score=38.30 Aligned_cols=72 Identities=17% Similarity=0.098 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHHHHHcC
Q 039172 341 LHLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVG 417 (477)
Q Consensus 341 ~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~~~~~g 417 (477)
+.+.+.+.++++.+.-....++.|+++||-+....+++.+.+.+. +.++..+. --|.+++.|++-+-....|
T Consensus 311 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~--~~~v~~~~---np~~aVA~Gaa~~a~~l~~ 382 (554)
T 1yuw_A 311 RGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILSG 382 (554)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTT--TCCCBCCS---CTTTHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcC--CCccccCC---CchhHHHHHHHHHHHHhcC
Confidence 334445555665332112357899999999999999999998864 23333332 3467788887655444444
No 105
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=53.92 E-value=18 Score=35.23 Aligned_cols=42 Identities=10% Similarity=0.141 Sum_probs=31.1
Q ss_pred cEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHH
Q 039172 362 KHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWT 409 (477)
Q Consensus 362 ~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~a 409 (477)
+.|+++||-+.-..++++|++.+. .++..++. -|.++.+|++
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~~---~~v~~~~~---p~~ava~Gaa 320 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKETG---ISVIRSEE---PLTAVAKGAG 320 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHHS---SCEEECSS---TTTHHHHHHH
T ss_pred CcEEEECccccchHHHHHHHHHHC---CCccccCC---hHHHHHHHHH
Confidence 579999999999999999998873 45666532 2555666654
No 106
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=52.67 E-value=18 Score=36.50 Aligned_cols=55 Identities=22% Similarity=0.175 Sum_probs=35.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhc----CCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQF----NLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~----~~Pli~V~H 183 (477)
+....+++++|+++|++++|||.|.+..--+...+- ..+..++..+ ++|.+.|+.
T Consensus 31 ~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~----~~a~~~~~~lGl~~~~p~~~v~~ 89 (395)
T 4e1l_A 31 QLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQ----NVARQIAINAGIPNSVPSYTVNK 89 (395)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTC----CHHHHHHHHTTCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcc----hHHHHHHHHcCCCCCceEEEccc
Confidence 455678999999999999999999886422111111 1233344443 457888763
No 107
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=51.96 E-value=3e+02 Score=31.02 Aligned_cols=123 Identities=12% Similarity=0.126 Sum_probs=67.5
Q ss_pred CCcEEEEEecccccceEEEEecC-Ce--EEEEeeehhhhhhhhcCCccchh----cHHHHHHhHHHHHHHHHHHCCCCCC
Q 039172 71 DDLIILGIETSCDDTAAAVVRGN-GE--ILSQVVSSQADLLAKYGGVAPKM----AEEAHSLAIDPVVQEALHKANLTER 143 (477)
Q Consensus 71 ~~m~iLgIeTS~ddtsvAlv~~d-g~--il~~~~~sq~~~h~~~gGv~P~~----a~~~H~~~l~~~i~~~L~~agi~~~ 143 (477)
....+||||-....+-|++|+.+ |+ ++... .+. | .+|+. ....-...|...|.+.+++.++..+
T Consensus 524 E~G~~lalDlGGTn~Rv~~V~l~~g~~~~~~~~-~~~------~--~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~~ 594 (917)
T 1cza_N 524 ENGDFLALDLGGTNFRVLLVKIRSGKKRTVEMH-NKI------Y--AIPIEIMQGTGEELFDHIVSCISDFLDYMGIKGP 594 (917)
T ss_dssp CCEEEEEEEESSSSEEEEEEEEECSTTCEEEEE-EEE------E--CCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCCSS
T ss_pred cceEEEEEEECCCcEEEEEEEeCCCcceeEEee-eeE------E--ecCcccccCCHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 45578999999999999999864 43 43111 000 0 12222 2234455677788888888777655
Q ss_pred CcCEEEEec-CCCcchhhH----------------HHHHHHHHHHhhc----CC---CEEEeccHHHHHHHHHHhhhhcC
Q 039172 144 DLSAVAVTI-GPGLSLCLR----------------VGVQKARKIAGQF----NL---PIVGVHHMEAHALVARQWLTMTR 199 (477)
Q Consensus 144 did~IAvt~-GPG~~t~Lr----------------vG~~~Ak~La~~~----~~---Pli~V~H~~AHa~sa~~~~~~~~ 199 (477)
++ .+.+|. +|=--+++. +|..+.+-|..++ ++ |+.-+|--.+-+++..+ . +
T Consensus 595 ~l-~lG~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y---~-~ 669 (917)
T 1cza_N 595 RM-PLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAY---E-E 669 (917)
T ss_dssp CC-EEEEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHT---T-C
T ss_pred ce-eEEEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhcc---C-C
Confidence 66 566663 332111111 2434444444444 56 55556766666555544 1 1
Q ss_pred CcCceeeee
Q 039172 200 MQNDFLDLF 208 (477)
Q Consensus 200 ~~~P~l~ll 208 (477)
....+.++
T Consensus 670 -~~~~iglI 677 (917)
T 1cza_N 670 -PTCEVGLI 677 (917)
T ss_dssp -TTEEEEEE
T ss_pred -CCcEEEEE
Confidence 23566665
No 108
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=51.31 E-value=29 Score=34.93 Aligned_cols=50 Identities=22% Similarity=0.243 Sum_probs=35.1
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEec-CCCcchhhHHHHHHHHHHHhhcCCCEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTI-GPGLSLCLRVGVQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~-GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~ 182 (477)
+....+++++|+++|++++|||.|.+.. -|-.+ .+...++ .+++|.+.|+
T Consensus 57 dLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~----~A~~va~----~LgipafdV~ 107 (347)
T 3lma_A 57 KLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNV----TANYVAR----HLKIPFLCLF 107 (347)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSST----THHHHHH----HHCCCEEEBC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchh----HHHHHHH----HhCCCEEEec
Confidence 3445789999999999999999998753 35322 2222333 3489998885
No 109
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=50.45 E-value=35 Score=37.29 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHHHHHcC
Q 039172 342 HLEERCERAIEWALKIEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCVG 417 (477)
Q Consensus 342 ~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~~~~~g 417 (477)
.+.+.+.++++.+.-....++.|+++||.+.-..+++.+.+.+ |.++..+. --|-++++|++-+-....|
T Consensus 316 ~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f---g~~~~~~~---nPdeaVA~GAa~~a~~ls~ 385 (675)
T 3d2f_A 316 RVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF---GKPLSTTL---NQDEAIAKGAAFICAIHSP 385 (675)
T ss_dssp TTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH---TSCEECCS---CTTTHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc---CCCccccC---CcchHHHHHHHHHHHHhCC
Confidence 3344455555543211235789999999999999999999987 44555443 3477888887755444444
No 110
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=50.27 E-value=28 Score=35.75 Aligned_cols=51 Identities=16% Similarity=0.068 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcEEEEEchhHhhHH-HHHHHHHHHHcCCC
Q 039172 339 AVLHLEERCERAIEWALKIEPSIKHLVVSGGVASNKY-VRARLDRAVKNNSL 389 (477)
Q Consensus 339 v~~~L~~~~~ral~~~~~~~~~~~~lvlsGGVA~N~~-Lr~~L~~~~~~~g~ 389 (477)
+.+.++.++.+.+-.+.-.-.+++.||++||++-|+. +|+++.+.++..|+
T Consensus 302 a~d~f~yriak~Iga~aa~LG~vDaIVfTGGIgEns~~vr~~I~~~l~~lGi 353 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVLGRTDVISFTAGVGENVPPVRRDALAGLGGLGI 353 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHHHTTCGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEEEECCccccccHHHHHHHHHHHhhcCe
Confidence 3455555555544321111136899999999998855 99988877766554
No 111
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=50.23 E-value=19 Score=36.32 Aligned_cols=54 Identities=19% Similarity=0.057 Sum_probs=35.3
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC-CCcchhhHHHHHHHHHHHhhc----CCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG-PGLSLCLRVGVQKARKIAGQF----NLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G-PG~~t~LrvG~~~Ak~La~~~----~~Pli~V~H 183 (477)
+....+++++|+++|++++|||.|.+... |... +- ..+..++..+ ++|.+.|+.
T Consensus 33 ~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~-~~----~~a~~v~~~lGl~~~~p~~~v~~ 91 (396)
T 4dd5_A 33 ELGVTAAKEAIKRANITPDMIDESLLGGVLTAGL-GQ----NIARQIALGAGIPVEKPAMTINI 91 (396)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTS-CS----CHHHHHHHHTTCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCC-Cc----hHHHHHHHHcCCCCCceEEEecc
Confidence 44567899999999999999999988643 2211 11 1233344443 467888874
No 112
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=49.46 E-value=20 Score=36.17 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=35.0
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC-CCcchhhHHHHHHHHHHHhhcC----CCEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG-PGLSLCLRVGVQKARKIAGQFN----LPIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G-PG~~t~LrvG~~~Ak~La~~~~----~Pli~V~ 182 (477)
+....+++++|+++|++++|||.|.+..- |.. .+- ..+..++..++ .|.+.|+
T Consensus 31 ~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~-~~~----~~a~~i~~~lGl~~~~p~~~v~ 88 (394)
T 3ss6_A 31 ELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRT-DEA----NTARTAALAAGFPDTVTGYTIQ 88 (394)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCG-GGC----SHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCC-ccc----hHHHHHHHHcCCCCCceEEEec
Confidence 45567899999999999999999988643 222 111 23444454444 5677775
No 113
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=48.26 E-value=35 Score=33.01 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=29.8
Q ss_pred CCCcEEEEEchhHhhHHHHHHHHHHHHcCC--------------CEEEcCCCCCCCcHHHHHHHHHH
Q 039172 359 PSIKHLVVSGGVASNKYVRARLDRAVKNNS--------------LQLVCPPPSLCTDNGVMVAWTGI 411 (477)
Q Consensus 359 ~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g--------------~~l~~Pp~~~ctDNGamIa~ag~ 411 (477)
.+...|+++||++.+..+.+.+++.+++.- .++.... -+|++.++|++.+
T Consensus 223 ldPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~---lg~~a~l~GAa~l 286 (302)
T 3epq_A 223 LAPXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPR---LGSNAGIIGTLVL 286 (302)
T ss_dssp TCCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCT---TGGGHHHHHHHHH
T ss_pred HCchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECC---cCChHHHHHHHHH
Confidence 456789999999977555555554443321 1122222 3677788887754
No 114
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=45.78 E-value=87 Score=30.64 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhh--cCCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcC
Q 039172 340 VLHLEERCERAIEWALK--IEPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCP 394 (477)
Q Consensus 340 ~~~L~~~~~ral~~~~~--~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~P 394 (477)
.+.+.+.+.+.++.+.. ....++.|+++||.+....+++.+.+.+ +.++...
T Consensus 284 ~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l---~~~v~~~ 337 (377)
T 2ych_A 284 LVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTL---GVNLEPV 337 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHH---TSEEEEC
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHh---CCCeEec
Confidence 44455566666654321 1234789999999999999999999887 4555553
No 115
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=44.10 E-value=32 Score=34.27 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec-CCCc-chhhHHHHHHHHHHHhhcCCCEEEecc
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI-GPGL-SLCLRVGVQKARKIAGQFNLPIVGVHH 183 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~-GPG~-~t~LrvG~~~Ak~La~~~~~Pli~V~H 183 (477)
....+++++|+++|++++|||.|.+.. .|.. ..+ .+..++..|... ++|.+.|+.
T Consensus 77 La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~--~a~~v~~~lGl~-~~~~~~v~~ 133 (359)
T 3h78_A 77 LMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPS--QACLIQPLLGLR-HIPVLDIRA 133 (359)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSC--HHHHHHHHHTCC-SCCEEEEEC
T ss_pred HHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCc--HHHHHHHHcCCC-CCcEEEECC
Confidence 345788999999999999999988764 3422 222 222333333322 457777764
No 116
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=43.58 E-value=1.4e+02 Score=33.24 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=55.7
Q ss_pred CcEEEEEeccc-ccceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCEEEE
Q 039172 72 DLIILGIETSC-DDTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSAVAV 150 (477)
Q Consensus 72 ~m~iLgIeTS~-ddtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~IAv 150 (477)
+-.|||+|-.. +-|.+|++|.+|+++.....- .| .|..... .-...+.+++++. .++.||+
T Consensus 328 ~~~vlg~dpg~r~g~k~a~vd~~G~~l~~~~iy---~~------~~~~~~~----~~~~~l~~li~~~-----~~~~IaI 389 (785)
T 3bzc_A 328 PRATLGLDPGLRTGVKVAVVDATGKLLDTATVY---PH------APKNQWD----QTLAVLAALCAKH-----QVELIAI 389 (785)
T ss_dssp SCCEEEEECCSSSCEEEEEECTTSCEEEEEEEC---CS------GGGCCHH----HHHHHHHHHHHHH-----TCCEEEE
T ss_pred CCeEEEECCCCcCceEEEEECCCCCEEEEEEEe---cC------CchhHHH----HHHHHHHHHHHHc-----CCCEEEE
Confidence 44699999875 557789999999998765421 11 1111111 1122344444443 5899999
Q ss_pred ecCCCcchhhHHHHHHHHHHHhh---cCCCEEEeccHHHHHHH
Q 039172 151 TIGPGLSLCLRVGVQKARKIAGQ---FNLPIVGVHHMEAHALV 190 (477)
Q Consensus 151 t~GPG~~t~LrvG~~~Ak~La~~---~~~Pli~V~H~~AHa~s 190 (477)
+.|..+--.- .+...+-.. .++|.+-|+.--|-+++
T Consensus 390 Gngtasret~----~~v~~l~~~~~~~~i~~v~v~e~gArvy~ 428 (785)
T 3bzc_A 390 GNGTASRETD----KLAGELIKKYPGMKLTKIMVSEAGASVYS 428 (785)
T ss_dssp ESSTTHHHHH----HHHHHHHHHCGGGCCEEEEECCHHHHHHH
T ss_pred CCCccCHHHH----HHHHHHHHhcccCCCCEEEEcCCcCCHHH
Confidence 9986543222 222223222 35788888776555554
No 117
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=42.87 E-value=32 Score=35.47 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CcEEEEEchhHhhH-HHHHHHHHHHHcCCC
Q 039172 339 AVLHLEERCERAIEWALKIEPS-IKHLVVSGGVASNK-YVRARLDRAVKNNSL 389 (477)
Q Consensus 339 v~~~L~~~~~ral~~~~~~~~~-~~~lvlsGGVA~N~-~Lr~~L~~~~~~~g~ 389 (477)
+.+..+.++.+.+-.+-..-.| ++.||++||++-|+ .+|+++.+.++..|+
T Consensus 317 A~d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~l~~lGi 369 (415)
T 3sk3_A 317 AMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGF 369 (415)
T ss_dssp HHHHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHTCGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhhchhcCe
Confidence 3466677776665433222345 89999999999654 566777665554443
No 118
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=41.90 E-value=24 Score=34.48 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=23.3
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
+....+++++|+++|++++|||.|.+..
T Consensus 67 ~la~~Aa~~al~~ag~~~~~Id~vi~~t 94 (333)
T 4dfe_A 67 DLAFIASQRAIEAADIDPQSIDLIIVAT 94 (333)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3445788999999999999999988754
No 119
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=41.56 E-value=9 Score=36.87 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=28.3
Q ss_pred CCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHH
Q 039172 360 SIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTG 410 (477)
Q Consensus 360 ~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag 410 (477)
+...|+++|||+.+ +.+.+++.+++..+++.. +.|.+ ++|++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~-----~~~a~-~~GAa~ 274 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGK-----ILQSP-MEGLIQ 274 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEE-----ECSCT-HHHHHT
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEee-----cCCCH-HHHHHH
Confidence 45689999999988 778888877653334432 23444 467654
No 120
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=41.34 E-value=65 Score=31.07 Aligned_cols=42 Identities=12% Similarity=0.212 Sum_probs=25.8
Q ss_pred CCcEEEEEchhHhhHHHHHHHHHHHHcCCC---EEEcCCCCCCCcHHHHHHHH
Q 039172 360 SIKHLVVSGGVASNKYVRARLDRAVKNNSL---QLVCPPPSLCTDNGVMVAWT 409 (477)
Q Consensus 360 ~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~---~l~~Pp~~~ctDNGamIa~a 409 (477)
.+..|+++||.|.- +.+.+.+.+ +. ++.+++. -+-+.++|++
T Consensus 272 ~~~~vvl~GGga~l--l~~~l~~~~---~~~~~~~~~~~~---P~~a~A~G~~ 316 (320)
T 2zgy_A 272 GYTHVMVIGGGAEL--ICDAVKKHT---QIRDERFFKTNN---SQYDLVNGMY 316 (320)
T ss_dssp CCCEEEEESTTHHH--HHHHHHHTS---CCCGGGEECCSC---GGGHHHHHHH
T ss_pred CCCeEEEECChHHH--HHHHHHHHh---CCCCCceeeCCC---cHHHHHHHHH
Confidence 56889999998864 666666543 33 3555542 2445555654
No 121
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=39.13 E-value=20 Score=38.47 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=35.4
Q ss_pred CCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHH
Q 039172 359 PSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIE 412 (477)
Q Consensus 359 ~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~ 412 (477)
..++.|+++||-+.-..+++.+.+.+. .++..+ .--|.++++|++-+-
T Consensus 332 ~~i~~VvLvGG~srip~v~~~l~~~fg---~~~~~~---~npd~aVA~GAa~~a 379 (605)
T 2kho_A 332 SDIDDVILVGGQTRMPMVQKKVAEFFG---KEPRKD---VNPDEAVAIGAAVQG 379 (605)
T ss_dssp TTCSEEEEESGGGGSHHHHHHHHHHHS---SCCBCS---SCTTTHHHHHHHHHH
T ss_pred hhCceEEEECCcccChHHHHHHHHhcC---CCcCcC---CCcchHHHHHHHHHH
Confidence 357899999999999999999999873 333322 245778888876543
No 122
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=39.08 E-value=39 Score=33.96 Aligned_cols=55 Identities=20% Similarity=0.142 Sum_probs=35.4
Q ss_pred HhHHHHHHHHHHHC-CCCCCCcCEEEEecC-CCcchhhHHHHHHHHHHHhhc----CCCEEEecc
Q 039172 125 LAIDPVVQEALHKA-NLTERDLSAVAVTIG-PGLSLCLRVGVQKARKIAGQF----NLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~a-gi~~~did~IAvt~G-PG~~t~LrvG~~~Ak~La~~~----~~Pli~V~H 183 (477)
+....+++++|+++ |++++|||.|.+... |....+- ..+..++..+ ++|.+.|+.
T Consensus 29 ~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~----~~a~~~~~~~Gl~~~~p~~~v~~ 89 (387)
T 3goa_A 29 DLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGF----NIARNAALLAEIPHSVPAVTVNR 89 (387)
T ss_dssp HHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTT----THHHHHHHHTTCCTTSCCEEEEC
T ss_pred HHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCccccc----HHHHHHHHHcCCCCCCcEeEecC
Confidence 44567899999999 999999999988643 2221111 2233344333 467777874
No 123
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=38.50 E-value=60 Score=31.16 Aligned_cols=43 Identities=14% Similarity=0.308 Sum_probs=37.6
Q ss_pred CCCCcEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCCCCCC
Q 039172 358 EPSIKHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPPSLCT 400 (477)
Q Consensus 358 ~~~~~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~~~ct 400 (477)
..|.+-++.|.|..+...++++|.+.|++.|-++|+|.-...+
T Consensus 82 ~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~vpSGAi~G 124 (253)
T 1j5p_A 82 KNPVNYIIISTSAFADEVFRERFFSELKNSPARVFFPSGAIGG 124 (253)
T ss_dssp TSSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEECCCTTCCC
T ss_pred HCCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEecCCcccc
Confidence 3578888889998899999999999999999999999876655
No 124
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=38.49 E-value=31 Score=35.85 Aligned_cols=90 Identities=11% Similarity=0.148 Sum_probs=49.3
Q ss_pred CCcEEEEEecccccceEEEEec-CCeEEEEeeehhhh-------hhhhc--C-Ccc---c---hhcHHHHHHhHHHHHHH
Q 039172 71 DDLIILGIETSCDDTAAAVVRG-NGEILSQVVSSQAD-------LLAKY--G-GVA---P---KMAEEAHSLAIDPVVQE 133 (477)
Q Consensus 71 ~~m~iLgIeTS~ddtsvAlv~~-dg~il~~~~~sq~~-------~h~~~--g-Gv~---P---~~a~~~H~~~l~~~i~~ 133 (477)
.+..||.|++.+.....+|++- +.++++.-..+++- +..++ + +-. . +... .|.+.+..+++.
T Consensus 4 ~~~~ILviNaGSSSlKf~L~~~~~~~~l~~G~verIg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~A~~~il~~ 82 (438)
T 4h0p_A 4 KAEYLLAINCGSSSIKGKLFAIPSFELLANLAVTNISSSDERVKIKTTWEEGKGKDSEEEADYGDKI-RYASLVPILLDH 82 (438)
T ss_dssp -CEEEEEEEECSSCEEEEEEEETTTEEEEEEEEECCSCSSSEEEEEEEECSSSCCCEEEEEEEGGGS-CGGGHHHHHHHH
T ss_pred cCCEEEEEECCcccceeEEEEcCCCCeeeEEEEeecCCCCCCceEEEeeccCCcccccccccccCCC-CHHHHHHHHHHH
Confidence 3557999999999999999973 44555533332221 11111 2 211 0 1112 577777766666
Q ss_pred HHHHCCCCCCCcCEEEE---ecCCCcchhhHH
Q 039172 134 ALHKANLTERDLSAVAV---TIGPGLSLCLRV 162 (477)
Q Consensus 134 ~L~~agi~~~did~IAv---t~GPG~~t~Lrv 162 (477)
+.+...++..+|++|+. --|. +..+.+|
T Consensus 83 L~~~~~~~~~~i~aVGHRVVHGG~-f~~~v~I 113 (438)
T 4h0p_A 83 LTNSTHVKKEEIKYVCHRVVHGGM-HDKGIRV 113 (438)
T ss_dssp HHTTSSCCGGGEEEEEEEESCCTT-CSSCEEE
T ss_pred HHhcCCCchhcceeEEEEEeecCC-CCCCEEE
Confidence 65544445568888873 2344 4444444
No 125
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=38.20 E-value=52 Score=31.09 Aligned_cols=97 Identities=20% Similarity=0.303 Sum_probs=53.3
Q ss_pred CcEEEEEeccccc--ce---EEEEe-cCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCc
Q 039172 72 DLIILGIETSCDD--TA---AAVVR-GNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDL 145 (477)
Q Consensus 72 ~m~iLgIeTS~dd--ts---vAlv~-~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~di 145 (477)
.-+|.|+|.|..+ .+ +++++ .+.+++...... .+..-+| +|-+=+. .. .+.+-++|++... +.
T Consensus 36 ~~~VaGvDvsy~~~~~a~aa~Vvl~~~~~~~v~~~~~~-~~~~~PY---IPG~LaF---RE-~P~~l~al~~L~~---~P 104 (225)
T 2w36_A 36 PEYVAGVALSFPGKEEGLAVIVVLEYPSFKILEVVSER-GEITFPY---IPGLLAF---RE-GPLFLKAWEKLRT---KP 104 (225)
T ss_dssp CSEEEEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEE-EECCSCC---CTTCTHH---HH-HHHHHHHHTTCCS---CC
T ss_pred ccEEEEEEeeeeCCCcEEEEEEEEECCCCcEEEEEEEE-ecccCCc---ccchHHH---hh-hHHHHHHHHhcCC---CC
Confidence 4578999999853 32 23334 255666554331 2333444 3333221 12 2445567776553 68
Q ss_pred CEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEec
Q 039172 146 SAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 146 d~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~ 182 (477)
|.|-|+ |=|..=.-|.|++. -|...+++|.|||-
T Consensus 105 dlllvD-G~Gi~HpR~~GlA~--HlGv~l~~PtIGVA 138 (225)
T 2w36_A 105 DVVVFD-GQGLAHPRKLGIAS--HMGLFIEIPTIGVA 138 (225)
T ss_dssp SEEEEE-SCSSSSTTSCCHHH--HHHHHHTSCEEEEE
T ss_pred CEEEEe-CeEEEcCCCCCchh--hhhhhhCCCEEEEE
Confidence 999888 44433222444443 35667789999985
No 126
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=37.05 E-value=43 Score=32.77 Aligned_cols=29 Identities=28% Similarity=0.329 Sum_probs=24.5
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.+.+..+++++|+++|++++|||.+++-.
T Consensus 223 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq 251 (323)
T 3il3_A 223 VRELSNVVEETLLANNLDKKDLDWLVPHQ 251 (323)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTCCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcC
Confidence 45677899999999999999999987543
No 127
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=36.90 E-value=39 Score=32.66 Aligned_cols=29 Identities=28% Similarity=0.339 Sum_probs=24.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+....+++++|+++|+.++|||.|.+...
T Consensus 63 ~la~~A~~~al~~ag~~~~~id~vi~~t~ 91 (335)
T 1u6e_A 63 SMATEACRRALSNAGLSAADIDGVIVTTN 91 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 44557889999999999999999987654
No 128
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=36.71 E-value=71 Score=32.68 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHH-HhhcCCCCcEEEEEchhHhh-HHHHHHHHHHHHcCCC
Q 039172 339 AVLHLEERCERAIEW-ALKIEPSIKHLVVSGGVASN-KYVRARLDRAVKNNSL 389 (477)
Q Consensus 339 v~~~L~~~~~ral~~-~~~~~~~~~~lvlsGGVA~N-~~Lr~~L~~~~~~~g~ 389 (477)
+.+.++.++.+.+-. +-.+ .+++.||++||++-| ..+|+++.+.++..|+
T Consensus 293 A~d~f~yri~k~Iga~aa~L-g~vDaIVfTGGIgens~~vR~~i~~~l~~lGi 344 (391)
T 3r9p_A 293 AYSVFTHRLRKYIGAYLAVL-GHTDVISFTAGIGENDAAVRRDAVSGMEELGI 344 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-SSCCEEEEEHHHHHHCHHHHHHHHTTCGGGTB
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCCCEEEECcccccCCHHHHHHHHHHHHhcCc
Confidence 345555555555431 1122 378999999999998 5599988877665554
No 129
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=36.70 E-value=48 Score=32.94 Aligned_cols=54 Identities=20% Similarity=0.260 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec----CCCcchhhHHHHHHHHHHHhhcCCCEEEecc
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI----GPGLSLCLRVGVQKARKIAGQFNLPIVGVHH 183 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~----GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H 183 (477)
....+++++|+++|++++|||.|.+.. +|.... .+..++..|.. .++|.+.|+.
T Consensus 57 La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~---~a~~v~~~lG~-~~~~~~~v~~ 114 (357)
T 3s3l_A 57 MAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWP---AASYVAHEAVG-RHVPAFGLAQ 114 (357)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSC---HHHHHHHHHTC-SSSCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCccccc---HHHHHHHHhCC-CCCcEEEEcC
Confidence 345788999999999999999998865 465432 13334444432 3567877764
No 130
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=36.40 E-value=2e+02 Score=33.04 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=55.3
Q ss_pred cEEEEEeccccc-----ceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCE
Q 039172 73 LIILGIETSCDD-----TAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSA 147 (477)
Q Consensus 73 m~iLgIeTS~dd-----tsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~ 147 (477)
..|||||-...+ +.+|++|.+|+++.....-- | ++ |.....+-. ..+.+++++. .++.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~~G~~l~~~~i~~---~-~~----~~~~~~~~~----~~l~~li~~~-----~~~~ 581 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVD---N-PF----DKTNPEKFE----DTLDNIIQSC-----QPNA 581 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECTTSCEEEEEEECS---C-TT----CSSCCHHHH----HHHHHHHHHH-----CCSE
T ss_pred CeEEEecCCCCCCCCCCeEEEEECCCCCEEEEEEEcC---C-CC----ChhhHHHHH----HHHHHHHHHc-----CCcE
Confidence 469999997643 66899999999987664310 0 10 111111111 2333444443 5789
Q ss_pred EEEecCCCcchhhHHHHHHHHHHHh-------hcCCCEEEeccHHHHHHH
Q 039172 148 VAVTIGPGLSLCLRVGVQKARKIAG-------QFNLPIVGVHHMEAHALV 190 (477)
Q Consensus 148 IAvt~GPG~~t~LrvG~~~Ak~La~-------~~~~Pli~V~H~~AHa~s 190 (477)
||++. |+.-+-+.--.+.+.+.. ..+++++-|+.--|-+++
T Consensus 582 IaIGn--~s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYs 629 (1030)
T 3psf_A 582 IGING--PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 629 (1030)
T ss_dssp EEECC--SSTHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHH
T ss_pred EEECC--CCHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHH
Confidence 99986 444333322222222222 135889999987666654
No 131
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=36.40 E-value=32 Score=34.07 Aligned_cols=26 Identities=8% Similarity=0.032 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 127 IDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 127 l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
...+++++|+++|++++|||.|.+..
T Consensus 70 a~~Aa~~aL~~agi~~~~Id~vi~~t 95 (354)
T 4efi_A 70 CRKAGEKLLAGLGWQADSIDALIFVS 95 (354)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 45688999999999999999988754
No 132
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=35.80 E-value=33 Score=34.20 Aligned_cols=31 Identities=6% Similarity=0.118 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEe-cCCCc
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVT-IGPGL 156 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt-~GPG~ 156 (477)
....+++++|+++|++++|||.|.+. ..|..
T Consensus 83 La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~ 114 (365)
T 3gwa_A 83 LAYEAARKLFAQGAVGADQVDFVILCTQAPDY 114 (365)
T ss_dssp HHHHHHHHHHHTTSCCGGGCCEEEEEESSCSC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCC
Confidence 34578899999999999999998874 45533
No 133
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=35.65 E-value=46 Score=33.13 Aligned_cols=29 Identities=24% Similarity=0.222 Sum_probs=24.4
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.+.+..+++++|+++|++++|||.+++-.
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq 281 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICHQ 281 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC
Confidence 34577899999999999999999987543
No 134
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=35.25 E-value=22 Score=35.33 Aligned_cols=49 Identities=8% Similarity=0.059 Sum_probs=28.8
Q ss_pred CCcEEEEEch-hHhhHHHHH--HHHHHHHc----C---------CCEEEcCCCCCCCcHHHHHHHHHH
Q 039172 360 SIKHLVVSGG-VASNKYVRA--RLDRAVKN----N---------SLQLVCPPPSLCTDNGVMVAWTGI 411 (477)
Q Consensus 360 ~~~~lvlsGG-VA~N~~Lr~--~L~~~~~~----~---------g~~l~~Pp~~~ctDNGamIa~ag~ 411 (477)
+...|+++|| ++.+..+.+ .+++.+.+ . ..++++.. .++++.++|++.+
T Consensus 304 ~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~---~~~~a~l~GAa~l 368 (373)
T 2q2r_A 304 LPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQK---KLLNLNLMGCYRC 368 (373)
T ss_dssp CCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEEC---SCCCHHHHHHHHH
T ss_pred CCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEe---cCCchhHHHHHHH
Confidence 3457999888 777666666 44443322 1 23444432 4667778887764
No 135
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=35.25 E-value=36 Score=33.30 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
....+++++|+++|++++|||.|.+..
T Consensus 61 La~~Aa~~aL~~ag~~~~~Id~vi~~t 87 (323)
T 3il3_A 61 MGFEAAKNAIEAAQINPQDIELIIVAT 87 (323)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 345788999999999999999998754
No 136
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=34.95 E-value=36 Score=33.33 Aligned_cols=44 Identities=30% Similarity=0.442 Sum_probs=31.3
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCC
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLP 177 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~P 177 (477)
+.++..++++|+++|++++|||.+++- ++. .++ -+.++..+++|
T Consensus 249 ~~~~~~i~~~L~~~gl~~~did~~v~H--q~~---~~i----~~~~~~~Lgl~ 292 (350)
T 4ewp_A 249 WSMAKVAREALDAAGVEPEDLAAFIPH--QAN---MRI----IDEFAKQLKLP 292 (350)
T ss_dssp HTHHHHHHHHHHHHTCCGGGEEEEEEC--CSC---HHH----HHHHHHHTTCC
T ss_pred HhhhHHHHHHHHhhcCChhHhceEEec--CCC---HHH----HHHHHHHcCcC
Confidence 467789999999999999999998754 432 233 34455555655
No 137
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=34.22 E-value=41 Score=33.89 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 127 IDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 127 l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
...+.+++|+++|++++|||.|.+..
T Consensus 100 a~~Aa~~AL~~ag~~~~dId~li~~t 125 (387)
T 3oit_A 100 AAEAAKKAIAEWGRPAADITHLVVTT 125 (387)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 34688999999999999999988754
No 138
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=34.17 E-value=41 Score=33.34 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=24.7
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.+.++.+++++|+++|++++|||.+++-.
T Consensus 243 ~~~~~~~i~~~l~~~gl~~~did~~v~Hq 271 (354)
T 4efi_A 243 LNAVPKLVSRTLDIAGRDKDSYDAFLFHQ 271 (354)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCC
Confidence 35677889999999999999999997654
No 139
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=33.95 E-value=56 Score=31.85 Aligned_cols=28 Identities=29% Similarity=0.337 Sum_probs=24.0
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.+.+..+++++|+++|++++|||.+++-
T Consensus 233 ~~~~~~~i~~~l~~~gl~~~did~~~~H 260 (333)
T 4dfe_A 233 VNVLEKVAVEALEKANLSAEQIDWLIPH 260 (333)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 3567789999999999999999998754
No 140
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=33.77 E-value=94 Score=33.79 Aligned_cols=82 Identities=13% Similarity=0.210 Sum_probs=54.5
Q ss_pred CCcEEEEEecccccceEEEEe-cCCeEEEEeeehhhhhhhhcC-CccchhcHH---------HH---HHhHHHHHHHHHH
Q 039172 71 DDLIILGIETSCDDTAAAVVR-GNGEILSQVVSSQADLLAKYG-GVAPKMAEE---------AH---SLAIDPVVQEALH 136 (477)
Q Consensus 71 ~~m~iLgIeTS~ddtsvAlv~-~dg~il~~~~~sq~~~h~~~g-Gv~P~~a~~---------~H---~~~l~~~i~~~L~ 136 (477)
...+-|+||-.+....+.|+| .+|++++...... -...|| -|+.++..- -| .+.|..+++++++
T Consensus 204 ~~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~N--pQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~ 281 (631)
T 3zyy_X 204 QRVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYN--KQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCK 281 (631)
T ss_dssp CCCEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--GGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEecccceeEEEEECCCCCEEEeecccC--CCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 456778999999889999998 5788887654321 124576 343332211 11 1234567778888
Q ss_pred HCCCCCCCcCEEEEecCC
Q 039172 137 KANLTERDLSAVAVTIGP 154 (477)
Q Consensus 137 ~agi~~~did~IAvt~GP 154 (477)
++|+++++|..+++.-.|
T Consensus 282 ~~~i~~~~I~~~~v~GNt 299 (631)
T 3zyy_X 282 EHGVEKKEIMAAVVAGNT 299 (631)
T ss_dssp HHTCCGGGEEEEEEEECH
T ss_pred HcCCCHHHeeEEEEEccH
Confidence 889999999999888654
No 141
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=33.56 E-value=46 Score=32.44 Aligned_cols=41 Identities=29% Similarity=0.285 Sum_probs=30.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHH
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKI 170 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~L 170 (477)
+.+..+++++|+++|++++|||.|.+- ++ +.+++-.+++.|
T Consensus 231 ~~~~~~i~~aL~~agl~~~did~v~~H-~~----~~~~~d~i~~~l 271 (339)
T 1mzj_A 231 ADVVPAAREALEVAGLTVGDLVAFVPH-QA----NLRIIDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHTTTCCGGGCSEEEEC-CS----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC-CC----CHHHHHHHHHHh
Confidence 456789999999999999999998754 32 345555555554
No 142
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=33.30 E-value=43 Score=32.52 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=29.9
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHH
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKI 170 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~L 170 (477)
+.+..+++++|+++|++++|||.|..- ++ +.++.-.+++.|
T Consensus 224 ~~~~~~i~~aL~~agl~~~did~~~~H-~~----~~~~~d~~~~~l 264 (331)
T 2x3e_A 224 TQMSDSVRRVLDRVGWQASDLHHLVPH-QA----NTRILAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC-CC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc-CC----CHHHHHHHHHHc
Confidence 456789999999999999999998753 33 334444555554
No 143
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=32.98 E-value=38 Score=33.17 Aligned_cols=28 Identities=36% Similarity=0.380 Sum_probs=22.7
Q ss_pred HHHHHHHHHHCCCCCCCcCEEEEe-cCCC
Q 039172 128 DPVVQEALHKANLTERDLSAVAVT-IGPG 155 (477)
Q Consensus 128 ~~~i~~~L~~agi~~~did~IAvt-~GPG 155 (477)
..+.+++|+++|++++|||.|.+. .-|.
T Consensus 67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~ 95 (350)
T 4ewp_A 67 VGAAREALERAGLQGSDLDAVIVSTVTFP 95 (350)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEEECSCCS
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeccCC
Confidence 468899999999999999987754 4454
No 144
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=32.88 E-value=41 Score=33.03 Aligned_cols=57 Identities=12% Similarity=0.010 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec-CCCcchhhHHHHHHHHHHHhhcCCCEEEecc
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI-GPGLSLCLRVGVQKARKIAGQFNLPIVGVHH 183 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~-GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H 183 (477)
....+++++|+++|++++|||.|.+.. .|+.... -.+..++..|....+.|.+.|+.
T Consensus 71 La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p-~~a~~v~~~lGl~~~~~~~~v~~ 128 (345)
T 3s21_A 71 AATQAARKALIDANIGIEKIGLLINTSVSRDYLEP-STASIVSGNLGVSDHCMTFDVAN 128 (345)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSS-CHHHHHHHHHTCCTTCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCC-hHHHHHHHHhCCCCCceEEeECC
Confidence 345788999999999999999998764 3544322 11222333332222356666664
No 145
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=32.78 E-value=41 Score=33.51 Aligned_cols=29 Identities=7% Similarity=0.075 Sum_probs=24.4
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
.+.++.+++++|+++|++++|||.+++-.
T Consensus 265 ~~~~~~~i~~~L~~~gl~~~did~~v~Hq 293 (365)
T 3gwa_A 265 LAEVPRAADRLLALAGEPRENIDCFVLHQ 293 (365)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEcC
Confidence 35567899999999999999999997543
No 146
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=32.34 E-value=43 Score=33.65 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=23.4
Q ss_pred HHHHHHHHHHCCCCCCCcCEEEEecCCC
Q 039172 128 DPVVQEALHKANLTERDLSAVAVTIGPG 155 (477)
Q Consensus 128 ~~~i~~~L~~agi~~~did~IAvt~GPG 155 (477)
..+++++|+++|++++|||.|.+...-+
T Consensus 86 ~~Aa~~aL~~ag~~~~dId~li~~t~t~ 113 (379)
T 3euo_A 86 VEASRKAMAEARLVPAQITHMVSTTCTD 113 (379)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCC
Confidence 4688999999999999999998765433
No 147
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=32.27 E-value=50 Score=34.36 Aligned_cols=28 Identities=14% Similarity=0.178 Sum_probs=23.5
Q ss_pred HHHHHHHHHHCCCCCCCcCEEEEecCCC
Q 039172 128 DPVVQEALHKANLTERDLSAVAVTIGPG 155 (477)
Q Consensus 128 ~~~i~~~L~~agi~~~did~IAvt~GPG 155 (477)
..+.+++|+++|++++|||.|.+..-.+
T Consensus 115 ~~Aa~~AL~~agi~~~dId~li~~t~t~ 142 (465)
T 3e1h_A 115 VEASRKAMAEARLVPAQITHMVSTTCTD 142 (465)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEECSSC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeeCC
Confidence 4688999999999999999998875433
No 148
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=32.16 E-value=1.5e+02 Score=28.24 Aligned_cols=96 Identities=22% Similarity=0.340 Sum_probs=53.9
Q ss_pred CcEEEEEeccccc------ceEEEEe-cCCeEEEEeeehhhhhhhhcCCccch-hcHHHHHHhHHHHHHHHHHHCCCCCC
Q 039172 72 DLIILGIETSCDD------TAAAVVR-GNGEILSQVVSSQADLLAKYGGVAPK-MAEEAHSLAIDPVVQEALHKANLTER 143 (477)
Q Consensus 72 ~m~iLgIeTS~dd------tsvAlv~-~dg~il~~~~~sq~~~h~~~gGv~P~-~a~~~H~~~l~~~i~~~L~~agi~~~ 143 (477)
.-.|.|+|.|+.+ .++++++ .+.+++...... .+..-+| +|- ++.| . .+.+-++|++.. .
T Consensus 39 ~~~VaGvDvsy~~~~~~~~Aa~Vvl~~~~l~~v~~~~~~-~~~~~PY---IPG~LaFR----E-~P~ll~al~~L~---~ 106 (237)
T 3goc_A 39 TGRVTGVDVAYDDERDVVVAAAVVLDAATLDVVAEATAV-GEVSFPY---VPGLLAFR----E-IPTVLAALDALP---C 106 (237)
T ss_dssp SSEEEEEEEEECSSSSEEEEEEEEEETTTCCEEEEEEEE-EECCSCC---CTTCGGGG----T-HHHHHHHHHTSS---S
T ss_pred ceEEEEEEEEeecCCceEEEEEEEEECCCCcEEEEEEEe-ccccCCC---Ccchhhhh----h-HHHHHHHHHhcC---C
Confidence 3579999999852 2333344 356666544322 1233344 232 2222 2 245557777654 3
Q ss_pred CcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEec
Q 039172 144 DLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 144 did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~ 182 (477)
+.|.|-|+ |-|..=.-|.|++. -|...+++|.|||-
T Consensus 107 ~PdlllvD-G~GiaHPRr~GlAs--HlGv~l~~PtIGVA 142 (237)
T 3goc_A 107 PPGLIVCD-GYGVAHPRRFGLAS--HLGVLTGLPTIGVA 142 (237)
T ss_dssp CCSEEEEE-SCSSCSTTSCCHHH--HHHHHHCSCEEEEE
T ss_pred CCCEEEEe-CceeecCCCcchhh--eeeeecCCCEEeee
Confidence 68999988 44544333445444 45667889999983
No 149
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=31.90 E-value=58 Score=31.16 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.+..+++++|+++|++++|||.|.+-
T Consensus 219 ~~~~~i~~aL~~agl~~~did~v~~H 244 (317)
T 1hnj_A 219 ELAHIVDETLAANNLDRSQLDWLVPH 244 (317)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 56789999999999999999998654
No 150
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=31.33 E-value=61 Score=30.89 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=23.6
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+....+++++|+++|++++|||.|.+...
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~~~~ 81 (313)
T 1zow_A 53 DLAYEASVKAIADAGIQPEDIDMIIVATA 81 (313)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 34457889999999999999999887643
No 151
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=31.32 E-value=74 Score=28.08 Aligned_cols=53 Identities=19% Similarity=0.302 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEecCCCc---chhhHHHHHHHHHHHhhcCCCEEEeccH
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTIGPGL---SLCLRVGVQKARKIAGQFNLPIVGVHHM 184 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~GPG~---~t~LrvG~~~Ak~La~~~~~Pli~V~H~ 184 (477)
....++++++++.+++++||-.|-+|.-|-+ |++ ..|+.+ -..++|++..+.+
T Consensus 52 At~ELl~eii~~N~l~~eDIvSv~FTvT~DL~A~FPA-----~aaR~~-Gw~~VPLmc~qEm 107 (148)
T 1xho_A 52 ETQKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPA-----IAARNM-GWTSTALMCMNEI 107 (148)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTH-----HHHHHT-TCTTSEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChH-----HHHHHc-CCCccchhhcccC
Confidence 3446788999999999999999999988875 443 455554 2335788776654
No 152
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=30.99 E-value=47 Score=32.35 Aligned_cols=53 Identities=13% Similarity=0.207 Sum_probs=34.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEec-CCCcchhhHHHHHHHHHHHhhcC---CCEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTI-GPGLSLCLRVGVQKARKIAGQFN---LPIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~-GPG~~t~LrvG~~~Ak~La~~~~---~Pli~V~ 182 (477)
+....+++++|+++|++++|||.|.+.. -|+.... +.|..++..++ +|.+.|+
T Consensus 54 ~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p-----~~a~~v~~~lGl~~~~~~~v~ 110 (321)
T 3il6_A 54 DLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMP-----SVACQVQGAIGATEAFAFDIS 110 (321)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSS-----CHHHHHHHHTTCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCC-----cHHHHHHHHcCCCCceEEEeC
Confidence 3445788999999999999999988754 4554322 12333444444 4566665
No 153
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=30.94 E-value=56 Score=32.95 Aligned_cols=26 Identities=4% Similarity=0.142 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 127 IDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 127 l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
...+.+++|+++|++++|||.|.+..
T Consensus 106 a~~Aa~~aL~~ag~~~~dId~vi~~t 131 (393)
T 3ov2_A 106 AKEAAEKAIKEWGRPKSEITHLVFCS 131 (393)
T ss_dssp HHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 34688999999999999999988754
No 154
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=30.88 E-value=51 Score=31.65 Aligned_cols=55 Identities=11% Similarity=0.004 Sum_probs=33.9
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC-CCc-chhhHHHHHHHHHHHhhcCCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG-PGL-SLCLRVGVQKARKIAGQFNLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G-PG~-~t~LrvG~~~Ak~La~~~~~Pli~V~H 183 (477)
+....+++++|+++|++++|||.|.+... |.. ..+ .+..++..|. ++.|.+.|+.
T Consensus 52 ~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~--~a~~v~~~lg--l~~~~~~v~~ 108 (322)
T 1ub7_A 52 DLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPD--TAALVQARFG--LKAFAYDLLA 108 (322)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESC--HHHHHHHHTT--CCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCc--HHHHHHHHhC--CCCEEEeeCc
Confidence 34457889999999999999998876543 433 221 1222232222 2567777763
No 155
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=30.80 E-value=57 Score=31.02 Aligned_cols=29 Identities=24% Similarity=0.336 Sum_probs=24.1
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+....+++++|+++|++++|||.|.+...
T Consensus 52 ~l~~~a~~~al~~ag~~~~~id~v~~~~~ 80 (309)
T 2ebd_A 52 YMATQAAKEALREANLSPEELDLIILATL 80 (309)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 44557889999999999999999987654
No 156
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=30.69 E-value=70 Score=30.47 Aligned_cols=41 Identities=17% Similarity=0.250 Sum_probs=29.4
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHH
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKI 170 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~L 170 (477)
+.+..+++++|+++|++++|||.|.+- ++| .+++-.+.+.|
T Consensus 212 ~~~~~~i~~al~~agl~~~did~~~~H-~~~----~~~~d~~~~~l 252 (313)
T 1zow_A 212 RIMGDASTRVVEKANLTSDDIDLFIPH-QAN----IRIMESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEC-CSC----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc-CCC----HHHHHHHHHHh
Confidence 466789999999999999999998754 333 34444444444
No 157
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=30.33 E-value=39 Score=32.06 Aligned_cols=26 Identities=8% Similarity=0.264 Sum_probs=21.2
Q ss_pred cEEEEEecccccceEEEEecCCeEEEE
Q 039172 73 LIILGIETSCDDTAAAVVRGNGEILSQ 99 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~dg~il~~ 99 (477)
+++|+||-....+..++++ +++++..
T Consensus 3 ~M~L~IDIGNT~ik~gl~~-~~~l~~~ 28 (249)
T 3bex_A 3 PMYLLVDVGNTHSVFSITE-DGKTFRR 28 (249)
T ss_dssp CEEEEEEECSSEEEEEEES-SSSSCEE
T ss_pred ceEEEEEECCCeEEEEEEE-CCEEEEE
Confidence 3589999999999999998 5566544
No 158
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=29.73 E-value=58 Score=31.92 Aligned_cols=27 Identities=7% Similarity=0.030 Sum_probs=23.5
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+.+...++++|+++|++++|||.+++-
T Consensus 246 ~~~~~~i~~~l~~~gl~~~did~~v~H 272 (345)
T 3s21_A 246 KLAQKTFVAAKQVLGWAVEELDQFVIH 272 (345)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 456788999999999999999999864
No 159
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=29.23 E-value=49 Score=33.45 Aligned_cols=30 Identities=10% Similarity=0.075 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEe-cCCC
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVT-IGPG 155 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt-~GPG 155 (477)
....+++++|+++|++++|||.|.+. ..|.
T Consensus 120 La~~Aa~~AL~~agi~~~dId~vi~~t~t~~ 150 (392)
T 3led_A 120 MAVTAAEQAIERWGKPRERIGAVLCACSNMQ 150 (392)
T ss_dssp HHHHHHHHHHHHHCSCGGGEEEEEEESSCCS
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCC
Confidence 34578899999999999999999874 4453
No 160
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=29.10 E-value=3.1e+02 Score=32.19 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=54.4
Q ss_pred cEEEEEecccc-----cceEEEEecCCeEEEEeeehhhhhhhhcCCccchhcHHHHHHhHHHHHHHHHHHCCCCCCCcCE
Q 039172 73 LIILGIETSCD-----DTAAAVVRGNGEILSQVVSSQADLLAKYGGVAPKMAEEAHSLAIDPVVQEALHKANLTERDLSA 147 (477)
Q Consensus 73 m~iLgIeTS~d-----dtsvAlv~~dg~il~~~~~sq~~~h~~~gGv~P~~a~~~H~~~l~~~i~~~L~~agi~~~did~ 147 (477)
..|||||-... -+.+|++|.+|+++.....-- | ++ |.....+-.+ .+.+++++. +++.
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~~G~vl~~~~i~~---~-~~----~~~~~~~a~~----~l~~li~~~-----~~~v 578 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVD---N-PF----DKTNPEKFED----TLDNIIQSC-----QPNA 578 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECTTSCEEEEEEECS---C-TT----CSSCSHHHHH----HHHHHHHHH-----CCSE
T ss_pred CeEEEecCCCCCCCCCceEEEEECCCCCEEEEEEEcC---C-CC----ChhhHHHHHH----HHHHHHHHc-----CCcE
Confidence 46999999775 356799999999987654310 0 00 1111111112 333444443 5799
Q ss_pred EEEecCCCcchhhHHHHHHHHHHHh-------hcCCCEEEeccHHHHHHH
Q 039172 148 VAVTIGPGLSLCLRVGVQKARKIAG-------QFNLPIVGVHHMEAHALV 190 (477)
Q Consensus 148 IAvt~GPG~~t~LrvG~~~Ak~La~-------~~~~Pli~V~H~~AHa~s 190 (477)
||++. |+.-+-+.--.+.+.+.. ..+++++-|+---|-+++
T Consensus 579 IaIGn--~sret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYs 626 (1219)
T 3psi_A 579 IGING--PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 626 (1219)
T ss_dssp EEECC--SSTHHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHH
T ss_pred EEECC--CCHHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHh
Confidence 99986 343333222222222221 135889999876666554
No 161
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=28.51 E-value=1.8e+02 Score=28.42 Aligned_cols=28 Identities=11% Similarity=0.044 Sum_probs=23.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
+....+++++|+++|++++|||.|.+..
T Consensus 97 ~la~~Aa~~al~~ag~~~~~id~vi~~t 124 (374)
T 2h84_A 97 DLAQQACLRALKDWGGDKGDITHIVSVT 124 (374)
T ss_dssp HHHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 3445788999999999999999998653
No 162
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=28.38 E-value=75 Score=32.26 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=35.6
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhc----CCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQF----NLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~----~~Pli~V~H 183 (477)
+....+++++|+++|++++|||.|.+...-+-.. +-..++.++..+ +.|.+.|+.
T Consensus 57 ~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~----~~~~a~~~a~~lGl~~~~p~~~v~~ 115 (418)
T 2iik_A 57 ELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGA----GAIMARIAQFLSDIPETVPLSTVNR 115 (418)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGG----GHHHHHHHHHHTTCCTTSCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccc----cccHHHHHHHHcCCCCCceEEEeCC
Confidence 4455788999999999999999988765322221 123444444444 457777753
No 163
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=28.33 E-value=59 Score=31.37 Aligned_cols=42 Identities=10% Similarity=0.168 Sum_probs=29.8
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHH
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIA 171 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La 171 (477)
+.+..+++++|+++|++++|||.|.+- ++ +.++.-.+++.|.
T Consensus 232 ~~~~~~i~~al~~agl~~~dId~~~~H-~~----~~~~~~~~~~~lg 273 (335)
T 1u6e_A 232 FKMGDVGRRAMDAAGVRPDQIDVFVPH-QA----NSRINELLVKNLQ 273 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEC-CS----CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC-CC----CHHHHHHHHHHcC
Confidence 356678999999999999999998754 33 3344445555543
No 164
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=27.86 E-value=60 Score=32.44 Aligned_cols=28 Identities=29% Similarity=0.359 Sum_probs=24.2
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.+.+..+++++|+++|++++|||.|.+-
T Consensus 286 ~~~~~~~i~~aL~~agl~~~dId~~~~H 313 (393)
T 1ted_A 286 FSGVAPVVTEMLWDNGLQISDIDLWAIH 313 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSCEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEEC
Confidence 4567789999999999999999998763
No 165
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=27.41 E-value=1.5e+02 Score=28.32 Aligned_cols=94 Identities=19% Similarity=0.274 Sum_probs=52.3
Q ss_pred cEEEEEeccccc--------ceEEEEe-cCCeEEEEeeehhhhhhhhcCCccch-hcHHHHHHhHHHHHHHHHHHCCCCC
Q 039172 73 LIILGIETSCDD--------TAAAVVR-GNGEILSQVVSSQADLLAKYGGVAPK-MAEEAHSLAIDPVVQEALHKANLTE 142 (477)
Q Consensus 73 m~iLgIeTS~dd--------tsvAlv~-~dg~il~~~~~sq~~~h~~~gGv~P~-~a~~~H~~~l~~~i~~~L~~agi~~ 142 (477)
-+|-|+|.|+.+ .++++++ .+.+++...... .+..-+| +|- ++.| . .+.+-++|++..
T Consensus 40 ~~VaGvDvsy~~~~~~~~~~aa~Vvl~~~~l~vv~~~~~~-~~~~~PY---IPG~LaFR----E-~P~ll~al~~L~--- 107 (246)
T 3ga2_A 40 NTTAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHSM-GRISVPY---VSGFLAFR----E-LPLIIEAAKKLE--- 107 (246)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEETTTCCEEEEEEEE-EECCCCS---SSSCGGGG----T-HHHHHHHHHHCS---
T ss_pred eEEEEEEeeeecCCCCeEEEEEEEEEECCCCcEEEEEEEE-cccCCCC---CCCchhhh----h-HHHHHHHHHhcC---
Confidence 478999999832 2233444 355666544322 1223344 232 2222 2 245557777654
Q ss_pred CCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEe
Q 039172 143 RDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGV 181 (477)
Q Consensus 143 ~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V 181 (477)
.+.|.|.|+ |-|..=.-|.|++. -|...+++|.|||
T Consensus 108 ~~PdlllvD-G~GiaHPRr~GlAs--HlGv~l~~PtIGV 143 (246)
T 3ga2_A 108 TEPDVFLFD-GNGYLHYNHMGVAT--HAAFFLGKPTIGI 143 (246)
T ss_dssp SCCSCEEEE-BCSSSSTTSCCHHH--HHHHHHTSCEEEE
T ss_pred CCCCEEEEc-CcEEecCCCcchhh--eeeeecCCCEEee
Confidence 368889888 44544333444443 4566678899997
No 166
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=27.15 E-value=80 Score=30.15 Aligned_cols=57 Identities=11% Similarity=0.076 Sum_probs=33.9
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC-CCcchhhHHHHHHHHHHHhhcCCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG-PGLSLCLRVGVQKARKIAGQFNLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G-PG~~t~LrvG~~~Ak~La~~~~~Pli~V~H 183 (477)
+....+++++|+++|++++|||.|.+... |..... .++..++..|... +.|.+.|+.
T Consensus 53 ~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~-~~a~~v~~~lgl~-~~~~~~v~~ 110 (317)
T 1hnj_A 53 TMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFP-SAACQIQSMLGIK-GCPAFDVAA 110 (317)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSS-CHHHHHHHHHTCC-SSCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCC-cHHHHHHHHhCCC-CCeEEeeCc
Confidence 34457889999999999999999776543 443221 1122223322211 157777764
No 167
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=26.45 E-value=1.1e+02 Score=26.12 Aligned_cols=54 Identities=22% Similarity=0.388 Sum_probs=39.5
Q ss_pred HhHHHHHHHHHHHCCCCC-CCcCEEEEecCCCc---chhhHHHHHHHHHHHhhcCCCEEEeccH
Q 039172 125 LAIDPVVQEALHKANLTE-RDLSAVAVTIGPGL---SLCLRVGVQKARKIAGQFNLPIVGVHHM 184 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~-~did~IAvt~GPG~---~t~LrvG~~~Ak~La~~~~~Pli~V~H~ 184 (477)
+.-..++++.+++.++++ +||-.|-+|.-|-+ |++ ..|+.+ -..++|++..+.+
T Consensus 21 ~at~eLl~~i~~~N~l~~~~divSv~FT~T~DL~a~FPA-----~aaR~~-g~~~VpL~c~qE~ 78 (122)
T 1ufy_A 21 QATRELLLKMLEANGIQSYEELAAVIFTVTEDLTSAFPA-----EAARQI-GMHRVPLLSAREV 78 (122)
T ss_dssp HHHHHHHHHHHHHHTCCCGGGEEEEEEEECTTCCSCCHH-----HHHHHT-TGGGSCEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCChHhEEEEEEEeCCccCccChH-----HHHHHc-CCCccchhhcccC
Confidence 334567889999999999 99999999988875 443 455555 2345888887654
No 168
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=26.36 E-value=66 Score=32.88 Aligned_cols=25 Identities=20% Similarity=0.264 Sum_probs=21.9
Q ss_pred HHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 128 DPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 128 ~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
..+++++|+++|++++|||.|.+..
T Consensus 142 ~~Aa~~AL~~agi~~~dId~li~~t 166 (413)
T 3v7i_A 142 ERAARGALQIAGLDVADVDCLITSN 166 (413)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEEC
T ss_pred HHHHHHHHHHhCcCHHHCCEEEEEc
Confidence 4688999999999999999998754
No 169
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=25.76 E-value=75 Score=31.70 Aligned_cols=27 Identities=7% Similarity=0.054 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
....+++++|+++|++++|||.|.+..
T Consensus 101 La~~Aa~~aL~~ag~~~~~Id~li~~t 127 (387)
T 3a5r_A 101 LGKEAALKAIKEWGQPKSKITHLIVCC 127 (387)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 345688999999999999999888653
No 170
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=25.44 E-value=62 Score=32.82 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=23.9
Q ss_pred HhHHHHHHHHHHH-CCCCCCCcCEEEEec
Q 039172 125 LAIDPVVQEALHK-ANLTERDLSAVAVTI 152 (477)
Q Consensus 125 ~~l~~~i~~~L~~-agi~~~did~IAvt~ 152 (477)
+....+++++|++ +|++++|||.|.+..
T Consensus 34 ~L~~~A~~~AL~~~AGl~~~dId~vi~g~ 62 (407)
T 3svk_A 34 NLVVGLVDELRRRYPDLDETLISDMILGV 62 (407)
T ss_dssp HHHHHHHHHHHHHSTTCCGGGEEEEEEEC
T ss_pred HHHHHHHHHHHhhhcCcCHHHCCEEEEEe
Confidence 4456789999999 999999999998864
No 171
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=25.44 E-value=78 Score=30.70 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=23.7
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
+....+++++|+++|++++|||.|.+...
T Consensus 62 ~la~~Aa~~al~~ag~~~~~id~vi~gt~ 90 (339)
T 1mzj_A 62 VMGVAASRRALEHAGVDPAEIDLVVVSTM 90 (339)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 44557889999999999999998886643
No 172
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=24.17 E-value=85 Score=27.04 Aligned_cols=55 Identities=13% Similarity=0.308 Sum_probs=38.0
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCc---chhhHHHHHHHHHHHhhcCCCEEEeccH
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGL---SLCLRVGVQKARKIAGQFNLPIVGVHHM 184 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~---~t~LrvG~~~Ak~La~~~~~Pli~V~H~ 184 (477)
+....++++.+++.+++++||-.|-+|.-|-+ |++ ..|+.+.-..++|++..+.+
T Consensus 22 ~at~eLl~~i~~~N~l~~~dIvSv~FT~T~DL~a~FPA-----~aaR~~~gw~~VpL~c~qEm 79 (127)
T 1dbf_A 22 QKTKQLLEKIIEENHTKPEDVVQMLLSATPDLHAVFPA-----KAVRELSGWQYVPVTCMQEM 79 (127)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEEEEECTTCCSSCTH-----HHHHTSTTCTTSCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEEEEEeCCccCccChH-----HHHhccCCCCccchhhcccC
Confidence 33456788999999999999999999988875 443 34443322235788776654
No 173
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=23.43 E-value=87 Score=31.41 Aligned_cols=54 Identities=7% Similarity=-0.037 Sum_probs=34.9
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecC-CCcchhhHHHHHHHHHHHhhcCC----CEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIG-PGLSLCLRVGVQKARKIAGQFNL----PIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~G-PG~~t~LrvG~~~Ak~La~~~~~----Pli~V~ 182 (477)
+....+++++|+++|++++|||.|.+... |+...+ -..+..++..+++ |.+.|+
T Consensus 28 ~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~----~~~a~~va~~lGl~~~~p~~~v~ 86 (401)
T 1ulq_A 28 DLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDN----RNVARMALLLAGFPVEVAGCTVN 86 (401)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTT----TTHHHHHHHHTTCCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCC----ChHHHHHHHHhCCCCCccEeecc
Confidence 34456889999999999999999988653 222111 1234455555544 566776
No 174
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=23.27 E-value=1.5e+02 Score=31.96 Aligned_cols=35 Identities=17% Similarity=0.082 Sum_probs=29.9
Q ss_pred cEEEEEchhHhhHHHHHHHHHHHHcCCCEEEcCCC
Q 039172 362 KHLVVSGGVASNKYVRARLDRAVKNNSLQLVCPPP 396 (477)
Q Consensus 362 ~~lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~Pp~ 396 (477)
..+||+||-|+=..+.+...+.+..+++.+-.|..
T Consensus 550 ~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~ 584 (610)
T 2d0o_A 550 PFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNI 584 (610)
T ss_dssp CEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCG
T ss_pred CCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCc
Confidence 78999999999999999998888876787777764
No 175
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=23.26 E-value=67 Score=31.96 Aligned_cols=45 Identities=11% Similarity=0.023 Sum_probs=31.2
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCE
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPI 178 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pl 178 (477)
.+.+. +++++|+++|++++|||.|..-. + +.++.-. ++..+++|-
T Consensus 252 ~~~~~-~i~~aL~~agl~~~dId~v~~H~-~----~~~i~d~----~~~~lgl~~ 296 (382)
T 1u0m_A 252 EPLAP-ALKELAGEHGWDASDLDFYIVHA-G----GPRILDD----LSTFLEVDP 296 (382)
T ss_dssp HHHHH-HHHHHHHTTSCCSSCCSCCEEEC-S----HHHHHHH----HHHHSCSCG
T ss_pred HHHHH-HHHHHHHHcCCCHHHCCEEEECC-C----CHHHHHH----HHHHcCCCH
Confidence 34567 89999999999999999997643 2 3444444 444556653
No 176
>3by5_A Cobalamin biosynthesis protein; structural genomics, unknown function; 2.52A {Agrobacterium tumefaciens str} SCOP: c.151.1.1
Probab=23.18 E-value=1.6e+02 Score=26.11 Aligned_cols=48 Identities=21% Similarity=0.053 Sum_probs=33.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCCEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLPIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~ 182 (477)
+.|...|+++|+++|+. |+.|+.-.-----.+| ..+|..+++|+..++
T Consensus 24 ~~i~~ai~~aL~~~gl~---v~~lATid~K~dE~gL-------~e~A~~lgvPl~~~~ 71 (155)
T 3by5_A 24 DAIIAAVRAAERAFGVT---VDYLATAPLKADEAGL-------AEAAKGLSLSLEIVA 71 (155)
T ss_dssp HHHHHHHHHHHHHHTCC---CCEEEESSCCSCCHHH-------HHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHHHCCCC---eEEEEchhhhCCCHHH-------HHHHHHhCCCeEEEC
Confidence 34667899999999996 8888855321111122 457788999998875
No 177
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=22.82 E-value=4.8e+02 Score=26.59 Aligned_cols=133 Identities=14% Similarity=0.187 Sum_probs=66.6
Q ss_pred cEEEEEecccccceEEEEec-CCeEEEEeeehhhh-----hhhhcCCccch--hcHHHHHHhHHHHHHHHHH--HCCCC-
Q 039172 73 LIILGIETSCDDTAAAVVRG-NGEILSQVVSSQAD-----LLAKYGGVAPK--MAEEAHSLAIDPVVQEALH--KANLT- 141 (477)
Q Consensus 73 m~iLgIeTS~ddtsvAlv~~-dg~il~~~~~sq~~-----~h~~~gGv~P~--~a~~~H~~~l~~~i~~~L~--~agi~- 141 (477)
|+||.|++.+..+..+|++- +.++++.-..+++- +..+..|-..+ .....|...+..++ +.|. +.++.
T Consensus 1 M~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ig~~~~~l~~~~~g~~~~~~~~~~dh~~a~~~il-~~L~~~~~~~~~ 79 (403)
T 2iir_A 1 MRVLVINSGSSSIKYQLIEMEGEKVLCKGIAERIGIEGSRLVHRVGDEKHVIERELPDHEEALKLIL-NTLVDEKLGVIK 79 (403)
T ss_dssp CEEEEEEEETTEEEEEEEETTTTEEEEEEEEECTTSTTCEEEEEETTEEEEEECCCCSHHHHHHHHH-HHHHCTTTCSCS
T ss_pred CeEEEEeCCchhheeEEEEcCCCcEEEEEEEEecCCCCCeEEEecCCcceeeeccCCCHHHHHHHHH-HHHhhcccCccc
Confidence 68999999999999999983 34555544333211 10011221100 01124645444344 4554 45653
Q ss_pred -CCCcCEEEEe---cCCCcchhhHHHHHHHHHHHhhcCCCEEEeccHHHHHHHHHHhhhhcCCcCceeeeecc
Q 039172 142 -ERDLSAVAVT---IGPGLSLCLRVGVQKARKIAGQFNLPIVGVHHMEAHALVARQWLTMTRMQNDFLDLFNN 210 (477)
Q Consensus 142 -~~did~IAvt---~GPG~~t~LrvG~~~Ak~La~~~~~Pli~V~H~~AHa~sa~~~~~~~~~~~P~l~llDg 210 (477)
+++|++|+.- -|+-+..+.+|--.+-+.|-.. .|+-+ -|+-+++.....+.... ..-|.+++.|-
T Consensus 80 ~~~~i~aVgHRvVhGG~~f~~~~~I~~~vl~~l~~~--~~lAP-lHnp~nL~gI~a~~~~~-p~vp~vavFDT 148 (403)
T 2iir_A 80 DLKEIDAVGHRVVHGGERFKESVLVDEEVLKAIEEV--SPLAP-LHNPANLMGIKAAMKLL-PGVPNVAVFDT 148 (403)
T ss_dssp CSTTCCEEEEEESCCTTTCSSCEECCHHHHHHHHHH--GGGST-TTHHHHHHHHHHHHHHS-TTCCEEEEETT
T ss_pred cccceeEEEecCCCCCCCCCccEEECHHHHHHHHhc--CccCc-ccCHHHHHHHHHHHHhC-CCCCEEEeCCC
Confidence 4689999853 2333333445544444444332 23333 26666665444321111 24577766554
No 178
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=22.71 E-value=52 Score=31.60 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=23.3
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
+.+..+++++|+++|++++|||.|.+-
T Consensus 220 ~~~~~~i~~al~~agl~~~did~~~~H 246 (322)
T 1ub7_A 220 RVMNTATLEAIEKAGLTPEDIRLFVPH 246 (322)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 456789999999999999999998654
No 179
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=22.70 E-value=1.2e+02 Score=30.34 Aligned_cols=55 Identities=13% Similarity=0.115 Sum_probs=36.5
Q ss_pred HhHHHHHHHHHHHCC----CCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCC----CEEEecc
Q 039172 125 LAIDPVVQEALHKAN----LTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNL----PIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~ag----i~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~----Pli~V~H 183 (477)
+....+++++|+++| ++++|||.|.+...-+... +-..+..++..+++ |.+.|+.
T Consensus 37 ~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~----~~~~a~~va~~lGl~~~~p~~~v~~ 99 (393)
T 1afw_A 37 YLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGA----GATEHRAACLASGIPYSTPFVALNR 99 (393)
T ss_dssp HHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGG----GHHHHHHHHHHTTCCTTSCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCC----CChHHHHHHHHcCCCCCceEEEEcC
Confidence 344578899999999 9999999988865422211 23455555555554 6677763
No 180
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=22.70 E-value=90 Score=31.14 Aligned_cols=27 Identities=7% Similarity=0.062 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
....+++++|+++|++++|||.|.+..
T Consensus 105 La~~Aa~~aL~~agl~~~~Id~li~~t 131 (389)
T 1i88_A 105 LGKEAAVKAIKEWGQPKSKITHLIVCT 131 (389)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 345688999999999999999998754
No 181
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=22.60 E-value=53 Score=31.24 Aligned_cols=26 Identities=27% Similarity=0.419 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.+..+++++|+++|++++|||.|.+-
T Consensus 211 ~~~~~i~~al~~agl~~~did~~~~H 236 (309)
T 2ebd_A 211 SMEEVCREVLEKAGVKPEEVSLVIPH 236 (309)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 56779999999999999999988654
No 182
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=22.31 E-value=1.2e+02 Score=30.64 Aligned_cols=41 Identities=10% Similarity=0.161 Sum_probs=30.8
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHH
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKI 170 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~L 170 (477)
..++..++++|+++|++++|||.+++ +++ +.|+--.+++.|
T Consensus 291 ~~~~~~i~~~L~~~gl~~~dId~~v~--Hqa---n~~i~~~~~~~l 331 (392)
T 3led_A 291 PLVSEMIIEHAREIGIDPHGLKRMWL--HQA---NINMNEIIGRKV 331 (392)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEE--CSS---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEE--cCC---CHHHHHHHHHHh
Confidence 45677899999999999999999885 554 345555566654
No 183
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=22.29 E-value=1.5e+02 Score=30.30 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=36.7
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCC----CEEEec
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNL----PIVGVH 182 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~----Pli~V~ 182 (477)
+....+++++|+++|++++|||.|.+...-+-. ..+-..+..++..+++ |.+.|+
T Consensus 57 ~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~---~~~~~~a~~va~~lGl~~~~p~~~v~ 115 (442)
T 2wu9_A 57 DLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPG---SQRASECRMAAFYAGFPETVAVRTVN 115 (442)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBH---HHHHHHHHHHHHHTTCCTTSCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcc---CCCChHHHHHHHHcCCCCCceEEEeC
Confidence 344578899999999999999999886543211 1123445556665554 677776
No 184
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=22.09 E-value=82 Score=29.45 Aligned_cols=49 Identities=14% Similarity=0.072 Sum_probs=30.1
Q ss_pred CCcEEEEEchhHhh-HHHHHHHHHHHHcCCCEEEcCCCCCCCcHHHHHHHHHHHHHHc
Q 039172 360 SIKHLVVSGGVASN-KYVRARLDRAVKNNSLQLVCPPPSLCTDNGVMVAWTGIEHFCV 416 (477)
Q Consensus 360 ~~~~lvlsGGVA~N-~~Lr~~L~~~~~~~g~~l~~Pp~~~ctDNGamIa~ag~~~~~~ 416 (477)
+...|+++||++.+ ..+.+.++ ...++.+.. .++++..+|++.+...+.
T Consensus 214 dP~~IvlgG~i~~~~~~~~~~~~-----~~~~i~~s~---l~~~a~~~GAa~l~~~~~ 263 (267)
T 1woq_A 214 SPELFIVGGGISKRADEYLPNLR-----LRTPIVPAV---LRNEAGIVGAAIEIALQH 263 (267)
T ss_dssp CCSEEEEESGGGGGGGGTGGGCC-----CSSCEEECS---CSTTHHHHHHHHHHHHHC
T ss_pred CCCEEEEeChhhcccHHHHHhhc-----cCceEEECC---cCCcHHHHHHHHHHHhcc
Confidence 45689999999865 33433332 234455544 367777889887665443
No 185
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=21.81 E-value=58 Score=32.29 Aligned_cols=28 Identities=14% Similarity=0.140 Sum_probs=24.3
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEe
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVT 151 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt 151 (477)
.+.+..+++++|+++|++++|||.+++.
T Consensus 237 ~~~~~~~i~~~L~~~gl~~~did~~v~~ 264 (357)
T 3s3l_A 237 IDLLVAAKTQALEDAGTAIEDIAHAVIP 264 (357)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEECC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 3467789999999999999999999863
No 186
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=21.69 E-value=86 Score=31.70 Aligned_cols=27 Identities=4% Similarity=0.134 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
....+++++|+++|++++|||.|.+..
T Consensus 123 La~~Aa~~aL~~agl~~~dId~li~~t 149 (413)
T 2p0u_A 123 LAKEASMNAIKEWGRPKSEITHIVMAT 149 (413)
T ss_dssp HHHHHHHHHHHHHTSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHhCcCHHHCCEEEEEe
Confidence 345788999999999999999998754
No 187
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.65 E-value=41 Score=27.60 Aligned_cols=29 Identities=10% Similarity=0.336 Sum_probs=23.0
Q ss_pred EEEEchhHhhHHHHHHHHHHHHcCCCEEEc
Q 039172 364 LVVSGGVASNKYVRARLDRAVKNNSLQLVC 393 (477)
Q Consensus 364 lvlsGGVA~N~~Lr~~L~~~~~~~g~~l~~ 393 (477)
+||++|++.. .+-+++++.++++|+++-+
T Consensus 8 l~Cg~G~sTS-~l~~k~~~~~~~~gi~~~i 36 (106)
T 1e2b_A 8 LFSSAGMSTS-LLVSKMRAQAEKYEVPVII 36 (106)
T ss_dssp EECSSSTTTH-HHHHHHHHHHHHSCCSEEE
T ss_pred EECCCchhHH-HHHHHHHHHHHHCCCCeEE
Confidence 6677788766 7778999999999986544
No 188
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=21.61 E-value=6.6e+02 Score=25.64 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=68.1
Q ss_pred CcEEEEEecccccceEEEEecCC-e----EEEEeeehhhhhhhhcCCccchh----cHHHHHHhHHHHHHHHHHHCCCCC
Q 039172 72 DLIILGIETSCDDTAAAVVRGNG-E----ILSQVVSSQADLLAKYGGVAPKM----AEEAHSLAIDPVVQEALHKANLTE 142 (477)
Q Consensus 72 ~m~iLgIeTS~ddtsvAlv~~dg-~----il~~~~~sq~~~h~~~gGv~P~~----a~~~H~~~l~~~i~~~L~~agi~~ 142 (477)
...+||||-....+-|++++.+| + +..... .+|+. ....-...|...|++.+++.++..
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~~~~------------~ip~~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~ 134 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEGKGKSPRIQERTY------------CIPAEKMSGSGTELFKYIAETLADFLENNGMKD 134 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC-CCCCEEEEEEE------------CCCTTTTTSBHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cceEEEEEeCCCeEEEEEEecCCCCcceEEEEEEE------------ecCCcccCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45689999999999999999777 4 322111 12221 234555677788888888877643
Q ss_pred CCcCEEEEe-cCCCcchhh----------------HHHHHHHHHHHhhc---CCCE---EEeccHHHHHHHHHHhhhhcC
Q 039172 143 RDLSAVAVT-IGPGLSLCL----------------RVGVQKARKIAGQF---NLPI---VGVHHMEAHALVARQWLTMTR 199 (477)
Q Consensus 143 ~did~IAvt-~GPG~~t~L----------------rvG~~~Ak~La~~~---~~Pl---i~V~H~~AHa~sa~~~~~~~~ 199 (477)
++ -.+.+| .+|---+++ -+|..+.+-|..++ ++|+ .-+|--.+-+++..+ . +
T Consensus 135 ~~-~~lG~tfsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y---~-~ 209 (451)
T 1bdg_A 135 KK-FDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCAL---E-D 209 (451)
T ss_dssp SC-EEEEEEECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHT---T-C
T ss_pred cc-cceEEEEeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcc---c-C
Confidence 33 234444 233211111 11334555555555 7887 666766666666555 1 2
Q ss_pred CcCceeeee
Q 039172 200 MQNDFLDLF 208 (477)
Q Consensus 200 ~~~P~l~ll 208 (477)
...++.++
T Consensus 210 -~~~~iglI 217 (451)
T 1bdg_A 210 -PKCAVGLI 217 (451)
T ss_dssp -TTEEEEEE
T ss_pred -CCcEEEEE
Confidence 23556665
No 189
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=21.45 E-value=1.1e+02 Score=30.78 Aligned_cols=27 Identities=4% Similarity=0.078 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
....+++++|+++|++++|||.|.+..
T Consensus 118 La~~Aa~~aL~~agl~~~~Id~vi~~t 144 (402)
T 3awk_A 118 LAKEAAISAIKQWGQPKSKITHLVFAT 144 (402)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 345688999999999999999887653
No 190
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=21.22 E-value=1e+02 Score=30.91 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
....+++++|+++|++++|||.|.+..
T Consensus 110 La~~Aa~~aL~~agl~~~~Id~vi~~t 136 (402)
T 1ee0_A 110 LGKEAAVKAIDEWGLPKSKITHLIFCT 136 (402)
T ss_dssp HHHHHHHHHHHHHCSCGGGCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 345788999999999999999988754
No 191
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=21.01 E-value=1e+02 Score=30.58 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHCCCCCCCcCEEEEecC
Q 039172 126 AIDPVVQEALHKANLTERDLSAVAVTIG 153 (477)
Q Consensus 126 ~l~~~i~~~L~~agi~~~did~IAvt~G 153 (477)
....+.+++|+++|++++|||.|.+...
T Consensus 87 la~~Aa~~aL~~agl~~~~id~vi~~t~ 114 (382)
T 1u0m_A 87 RVPAVIQRALDDAELLATDIDVIIYVSC 114 (382)
T ss_dssp HHHHHHHHHHHHHTCCGGGCSEEEEECS
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEEec
Confidence 3457889999999999999999987543
No 192
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=21.00 E-value=99 Score=31.25 Aligned_cols=26 Identities=4% Similarity=0.130 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHCCCCCCCcCEEEEec
Q 039172 127 IDPVVQEALHKANLTERDLSAVAVTI 152 (477)
Q Consensus 127 l~~~i~~~L~~agi~~~did~IAvt~ 152 (477)
...+++++|+++|++++|||.|.+..
T Consensus 129 a~~Aa~~AL~~agl~~~~Id~li~~t 154 (413)
T 1xes_A 129 AKEAAEKAIQEWGQSKSGITHLIFCS 154 (413)
T ss_dssp HHHHHHHHHHHHCSCGGGCCEEEEEE
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEE
Confidence 44688999999999999999887643
No 193
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=20.93 E-value=1e+02 Score=30.88 Aligned_cols=55 Identities=16% Similarity=0.121 Sum_probs=35.5
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhc----CCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQF----NLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~----~~Pli~V~H 183 (477)
+....+++++|+++|++++|||.|.+...-+...+ -..+..++..+ ..|.+.|+.
T Consensus 32 ~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~----~~~a~~ia~~lgl~~~~p~~~v~~ 90 (397)
T 1wl4_A 32 DLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCG----QNPVRQASVGAGIPYSVPAWSCQM 90 (397)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSC----SCHHHHHHHHTTCCTTSCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCC----CHHHHHHHHHcCCCCCccEEEecC
Confidence 44557889999999999999999887643221111 12344455554 457777763
No 194
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=20.87 E-value=75 Score=35.66 Aligned_cols=30 Identities=10% Similarity=0.192 Sum_probs=25.4
Q ss_pred HHHHHHHHHHCCCCCCCcCEEEEecCCCcc
Q 039172 128 DPVVQEALHKANLTERDLSAVAVTIGPGLS 157 (477)
Q Consensus 128 ~~~i~~~L~~agi~~~did~IAvt~GPG~~ 157 (477)
..+.+++|+++|++++|||.|.+...++..
T Consensus 694 ~~Aa~~AL~~agl~~~dId~ii~~t~~~~~ 723 (979)
T 3tsy_A 694 KEAALKALKEWGQPKSKITHLVFCTTSGVE 723 (979)
T ss_dssp HHHHHHHHHHHCSCGGGCCEEEEEESSCCC
T ss_pred HHHHHHHHHHhCCCHHHCCEEEEEeeCCCC
Confidence 468889999999999999999987766654
No 195
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=20.65 E-value=2e+02 Score=29.16 Aligned_cols=57 Identities=9% Similarity=0.041 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCCCCcEEEEEchhHhhHHHHHHHHHHHH
Q 039172 328 RANIAASFQRVAVLHLEERCERAIEWALK------IEPSIKHLVVSGGVASNKYVRARLDRAVK 385 (477)
Q Consensus 328 ~~dIAasfQ~av~~~L~~~~~ral~~~~~------~~~~~~~lvlsGGVA~N~~Lr~~L~~~~~ 385 (477)
..+++.-++.. .+.+++.+.+.++.+.. .......|+|+||.+.=..+++.+.+.+.
T Consensus 291 ~~~l~~ii~p~-veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g 353 (419)
T 4a2a_A 291 AKKLSVIIHAR-LREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK 353 (419)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC
Confidence 34454444443 34455666666664431 11235679999999999999999988874
No 196
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=20.51 E-value=1.1e+02 Score=30.32 Aligned_cols=48 Identities=19% Similarity=0.185 Sum_probs=36.5
Q ss_pred HHhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhcCCC
Q 039172 124 SLAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQFNLP 177 (477)
Q Consensus 124 ~~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~~~P 177 (477)
.+.+...|+++|+++++...+||.|..+-|-....+++ +.|...++.+
T Consensus 324 ~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~------~~l~~~f~~~ 371 (409)
T 4gni_A 324 FEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIA------ANFRYIFPES 371 (409)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHH------HHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHH------HHHHHHcCCc
Confidence 34566788899999999999999999998876666553 4455566665
No 197
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=20.09 E-value=1.1e+02 Score=30.46 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=34.2
Q ss_pred HhHHHHHHHHHHHCCCCCCCcCEEEEecCCCcchhhHHHHHHHHHHHhhc----CCCEEEecc
Q 039172 125 LAIDPVVQEALHKANLTERDLSAVAVTIGPGLSLCLRVGVQKARKIAGQF----NLPIVGVHH 183 (477)
Q Consensus 125 ~~l~~~i~~~L~~agi~~~did~IAvt~GPG~~t~LrvG~~~Ak~La~~~----~~Pli~V~H 183 (477)
+....+++++|+++|+++++||.+.+..--+...+ -..+..++..+ +.|.+.|+.
T Consensus 34 ~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~----~~~a~~va~~lgl~~~~p~~~v~~ 92 (395)
T 2ib8_A 34 KLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEG----QAPTRQAVLGAGLPISTPCTTINK 92 (395)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSC----SCHHHHHHHHTTCCTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCC----chHHHHHHHHcCCCCCceEEEecc
Confidence 34557889999999999999999877532211111 11334444444 457777764
Done!