BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039173
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF29|SYP71_ARATH Syntaxin-71 OS=Arabidopsis thaliana GN=SYP71 PE=1 SV=1
Length = 266
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/266 (69%), Positives = 217/266 (81%), Gaps = 2/266 (0%)
Query: 1 MTVIDILFRLDDICKKYDKYDIEKQRDLNAHGDDAFARFYATVESEIDKALLKAETASME 60
MTVIDIL R+D ICKKYDKYD++KQR+ N GDDAFAR Y E++I+ AL KAE + E
Sbjct: 1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60
Query: 61 TNRAAAVAMKAEVRRTKARLLEEVPKLQKLARKKVKGLSKEEQETRHDLVLGLSERIEAI 120
NRAAAVAM AE+RRTKARL EEVPKLQ+LA K+VKGL+ EE R+DLVL L RIEAI
Sbjct: 61 KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120
Query: 121 PDGNTNATKANGGWATSA--SNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQDQ 178
PDG K+ W S+ S +IKFDSDG DD+FQ+S ESSQFRQEYEMRK+KQ+Q
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQ 180
Query: 179 GLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRS 238
GLD+ISEGLD LKN+A DMNEELDRQVPL+DEIDTKVD+ATSDLKN NVRLK+T+ ++RS
Sbjct: 181 GLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRS 240
Query: 239 SRNFCIDIILLCVILGIASYLYQALK 264
SRNFCIDI+LLC++LGIA+YLY LK
Sbjct: 241 SRNFCIDIVLLCIVLGIAAYLYNVLK 266
>sp|Q94KK6|SYP72_ARATH Syntaxin-72 OS=Arabidopsis thaliana GN=SYP72 PE=2 SV=1
Length = 267
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/266 (69%), Positives = 226/266 (84%), Gaps = 3/266 (1%)
Query: 1 MTVIDILFRLDDICKKYDKYDIEKQRDLNAHGDDAFARFYATVESEIDKALLKAETASME 60
M VIDI+FR+D+ICKKYDKYDI+K R++ A GDDAF+R + +++S+I+ L KAE AS E
Sbjct: 1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60
Query: 61 TNRAAAVAMKAEVRRTKARLLEEVPKLQKLARKKVKGLSKEEQETRHDLVLGLSERIEAI 120
NRAAAVAM AEVRRTKARL E+V KLQKLA KK+KGL++EE+E+R DLV+ L++R++AI
Sbjct: 61 KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120
Query: 121 PDGNTNATK-ANGGWA-TSASNKNIKFD-SDGNIGDDFFQQSEESSQFRQEYEMRKMKQD 177
PDGN + K AN W SA NKNIKFD S+ ++ D FFQQSEESSQFRQEYEMR+ KQD
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQD 180
Query: 178 QGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVR 237
+GLD+ISEGLD LKNLA DMNEELD+QVPL++E++TKVD ATSDLKN NVRLK+ L+++R
Sbjct: 181 EGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMR 240
Query: 238 SSRNFCIDIILLCVILGIASYLYQAL 263
SSRNFCIDIILLCVILGI SY+Y AL
Sbjct: 241 SSRNFCIDIILLCVILGIVSYIYNAL 266
>sp|Q94KK5|SYP73_ARATH Syntaxin-73 OS=Arabidopsis thaliana GN=SYP73 PE=2 SV=1
Length = 263
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/267 (61%), Positives = 210/267 (78%), Gaps = 7/267 (2%)
Query: 1 MTVIDILFRLDDICKKYDKYDIEKQRDLNAHGDDAFARFYATVESEIDKALLKAETASME 60
M VID++ R+D ICKKY+KYDI +QRD N GDDAF+R Y+ VE ++ L K E S E
Sbjct: 1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60
Query: 61 TNRAAAVAMKAEVRRTKARLLEEVPKLQKLARKKVKGLSKEEQETRHDLVLGLSERIEAI 120
TN+A AVAM AE+RRTKARLLE +PKLQ+L+ KKVKGLSKEE + R+DLVL L ++IEAI
Sbjct: 61 TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120
Query: 121 PDGNTNATKANGGWATSASNKNIKFD---SDGNIGDDFFQQSEESSQFRQEYEMRKMKQD 177
P+ + GGW S S NI+FD SD IG ++FQ + ES QF+QEYEM+++KQ
Sbjct: 121 PESSAPVV---GGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQA 177
Query: 178 QGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVR 237
+ LD I+EGLDTLKN+A D+NEELDRQ PL+DEIDTK+DKA +DLK+ NVRLK+T+ K+R
Sbjct: 178 R-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 236
Query: 238 SSRNFCIDIILLCVILGIASYLYQALK 264
SSRNFCIDIILLC++LGIA+++Y ++K
Sbjct: 237 SSRNFCIDIILLCILLGIAAFIYNSVK 263
>sp|Q94KK7|SYP52_ARATH Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1
Length = 233
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 27/200 (13%)
Query: 63 RAAAVAMKAEVRRTK----ARLLEEVPKLQKLARKKVKGLSKEEQETRHDLVLGLSERIE 118
RA+A+ K + T+ LL +VP Q ++ K E R D+V L +
Sbjct: 42 RASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEK--------EMNRRKDMVGNLRSKT- 92
Query: 119 AIPDGNTNATKANGGWATSASNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMK-QD 177
N A+ N ++ +N++ F +D D + S +Q ++ + M+ QD
Sbjct: 93 -----NQVASALN---MSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQD 144
Query: 178 QGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETL-LKV 236
+GL+ + E + + K++AL +NEEL Q LID++D VD S L+ R++++L L
Sbjct: 145 EGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLR----RVQKSLALMN 200
Query: 237 RSSRNFCIDIILLCVILGIA 256
+S ++ C + +L +LGI
Sbjct: 201 KSMKSGCSCMSMLLSVLGIV 220
>sp|Q9S7P9|SNP33_ARATH SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33
PE=1 SV=1
Length = 300
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 161 ESSQFRQEYEMRKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATS 220
ES+ Q EM K KQD GL +S+ L LKN+A+DM E+++Q +D + VD+
Sbjct: 226 ESADAYQRVEMEKAKQDDGLSDLSDILGELKNMAVDMGSEIEKQNKGLDHLHDDVDELNF 285
Query: 221 DLKNNNVRLKETLLK 235
++ +N R + L K
Sbjct: 286 RVQQSNQRGRRLLGK 300
>sp|Q9LMG8|SNP30_ARATH Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana
GN=SNAP30 PE=3 SV=1
Length = 263
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 167 QEYEMRKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNN 226
Q+ E K KQD GL +S+ L LK++A+DM E+D+Q +D + VD+ S ++ N
Sbjct: 195 QKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGAN 254
Query: 227 VRLKETLLK 235
R + L K
Sbjct: 255 QRARHLLSK 263
>sp|Q9SA23|SYP51_ARATH Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1
Length = 232
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
Query: 30 AHGDDAFARFY--ATVESEIDKALLKAETASMETN-----RAAAVAMKAEVRRTKARLLE 82
A D++ R Y A SE ++ ++S T RA+A+ K + K L+
Sbjct: 2 ASSSDSWMRAYNEALKLSEEINGMISERSSSAVTGPDAQRRASAIRRKITIFGNKLDSLQ 61
Query: 83 EVPKLQKLARKKVKGLSKEEQETRHDLVLGLSERIEAIPDGNTNATKANGGWATSASNKN 142
+ LA K +S++E R D+V L + + AN ++ +N++
Sbjct: 62 SL-----LAEIHGKPISEKEMNRRKDMVGNLRSKANQM---------ANALNMSNFANRD 107
Query: 143 IKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMK-QDQGLDVISEGLDTLKNLALDMNEEL 201
D D + + +Q Y+ + M+ QD+GL+ + + + K++AL ++EEL
Sbjct: 108 SLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEEL 167
Query: 202 DRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKV-RSSRNFCIDIILLCVILGI 255
D Q LID++D VD S L+ R++++L + ++ R+ C + +L +LGI
Sbjct: 168 DLQTRLIDDLDYHVDVTDSRLR----RVQKSLAVMNKNMRSGCSCMSMLLSVLGI 218
>sp|Q54IX6|STX8B_DICDI Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1
Length = 250
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 157 QQSEESSQF-------RQEYEMRKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLID 209
+++E + QF Q++ MR+ QD+ LD++S+ + KN+A M+ ELD+ ++D
Sbjct: 130 KETEATKQFDNQQLFTNQQHIMRE--QDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLD 187
Query: 210 EIDTKVDKATSDLKNNNVRLK 230
+++ D + L+N N R++
Sbjct: 188 DVEIGTDAVSMRLRNANRRME 208
>sp|Q6P6S0|SNP47_RAT Synaptosomal-associated protein 47 OS=Rattus norvegicus GN=Snap47
PE=2 SV=1
Length = 419
Score = 39.3 bits (90), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 158 QSEESSQFRQEYEMRKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDK 217
Q + SQ ++++ + + Q L I L LK LALD EL+RQ +D I VD+
Sbjct: 347 QEGQQSQLQKDWPLLSEGEAQELTQI---LSKLKGLALDTEAELERQDAALDGITVAVDR 403
Query: 218 ATSDLKNNNVRLKETL 233
AT + +N R+++ L
Sbjct: 404 ATLTVDKHNRRMRKLL 419
>sp|Q946Y7|SYP61_ARATH Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1
Length = 245
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 139 SNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQDQGLDVISEGLDTLKNLALDMN 198
S + ++D G DD F QSE Q + +QD+ LD +S+ + + + L ++
Sbjct: 127 SGEASRYDQYGGRDDDGFVQSESDRQM-----LLIKQQDEELDELSKSVQRIGGVGLTIH 181
Query: 199 EELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNF---CIDIILLCVILGI 255
+EL Q +IDE+DT++D + L+ ++ + K + C +++L +IL +
Sbjct: 182 DELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICF-LLVLFIILFV 240
Query: 256 ASYL 259
+L
Sbjct: 241 LVFL 244
>sp|O95721|SNP29_HUMAN Synaptosomal-associated protein 29 OS=Homo sapiens GN=SNAP29 PE=1
SV=1
Length = 258
Score = 38.1 bits (87), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
K D LD +S GL LK++AL M E++ Q ++D + TKVDK +V +K T
Sbjct: 201 KIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKL-------DVNIKSTER 253
Query: 235 KVR 237
KVR
Sbjct: 254 KVR 256
>sp|Q5R5K4|SNP29_PONAB Synaptosomal-associated protein 29 OS=Pongo abelii GN=SNAP29 PE=2
SV=1
Length = 258
Score = 38.1 bits (87), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
K D LD +S GL LK++AL M E++ Q ++D + TKVDK +V +K T
Sbjct: 201 KIDSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKL-------DVNIKSTER 253
Query: 235 KVR 237
KVR
Sbjct: 254 KVR 256
>sp|Q9ERB0|SNP29_MOUSE Synaptosomal-associated protein 29 OS=Mus musculus GN=Snap29 PE=1
SV=1
Length = 260
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
K D LD +S GL LK++AL M E++ Q ++D + TKVDK +V +K T
Sbjct: 203 KIDSNLDELSVGLGHLKDIALGMQTEIEEQDDILDRLTTKVDKL-------DVNIKSTEK 255
Query: 235 KVR 237
KVR
Sbjct: 256 KVR 258
>sp|Q9Z2P6|SNP29_RAT Synaptosomal-associated protein 29 OS=Rattus norvegicus GN=Snap29
PE=1 SV=1
Length = 257
Score = 37.4 bits (85), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
K D LD +S GL LK++AL M E++ Q ++D + TKVDK +V +K T
Sbjct: 200 KIDSNLDELSVGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKL-------DVNIKSTEK 252
Query: 235 KVR 237
KVR
Sbjct: 253 KVR 255
>sp|Q553P5|STX8A_DICDI Syntaxin-8A OS=Dictyostelium discoideum GN=syn8A PE=1 SV=1
Length = 152
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 168 EYEMRKMK-QDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNN 226
E + R M+ QD+ LD +S + +K+ A+ +N+ Q ++DE+D VD ++ ++N
Sbjct: 57 EKQKRDMEEQDKMLDALSGSISRVKDTAITINKTAQEQTDMLDELDVHVDSTSARMRNTT 116
Query: 227 VRLKETLLKVRSSRNFCIDIIL 248
L TL + + +C I
Sbjct: 117 KNLI-TLTQQSKTTGYCSAICF 137
>sp|Q8VXX9|BETL1_ARATH Bet1-like protein At4g14600 OS=Arabidopsis thaliana GN=At4g14600
PE=2 SV=1
Length = 137
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 190 LKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNFCIDIILL 249
LKN+A ++ E Q +DE+ + +A + +KNN +L ++ +RS N + ++L
Sbjct: 63 LKNIAQEIGSEAKFQRDFLDELQMTLIRAQAGVKNNIRKLNMSI--IRSGNNHIMHVVLF 120
Query: 250 CVILGIASYLYQAL 263
+++ Y++ +
Sbjct: 121 ALLVFFVLYIWSKM 134
>sp|Q0II86|SNP29_BOVIN Synaptosomal-associated protein 29 OS=Bos taurus GN=SNAP29 PE=2
SV=1
Length = 258
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 138 ASNKNIK--FDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQ--DQGLDVISEGLDTLKNL 193
AS+ N++ DSD G S E+ + + +R Q D LD +S GL LK++
Sbjct: 162 ASHPNLRKLQDSDSIPGGAGSAVSSEA--YPRNPHLRACHQRIDSNLDELSVGLGRLKDI 219
Query: 194 ALDMNEELDRQVPLIDEIDTKVDK 217
AL + E+D Q ++D + +KVDK
Sbjct: 220 ALGIQTEIDEQDDILDRLTSKVDK 243
>sp|Q8R570|SNP47_MOUSE Synaptosomal-associated protein 47 OS=Mus musculus GN=Snap47 PE=1
SV=1
Length = 413
Score = 36.2 bits (82), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 170 EMRKMKQDQGLDVISEG--------LDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSD 221
E +++ + L + SEG L +K LALD EL+RQ +D I VD+AT +
Sbjct: 342 EGEQLQLQKNLPLFSEGEAQELTQILSKMKGLALDTEAELERQDAALDGITVAVDRATLN 401
Query: 222 LKNNNVRLKETL 233
+ N R+++ +
Sbjct: 402 VDKQNRRMRKLM 413
>sp|A6QP11|SNP47_BOVIN Synaptosomal-associated protein 47 OS=Bos taurus GN=SNAP47 PE=1
SV=1
Length = 420
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 187 LDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLK 230
L LK LALD EL+RQ +D I VD+AT + +N R+K
Sbjct: 374 LRKLKGLALDTETELERQDEALDGITEAVDRATLTIDKHNRRMK 417
>sp|Q9SD96|SNP29_ARATH SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana GN=SNAP29
PE=2 SV=1
Length = 251
Score = 34.7 bits (78), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
KQD+ L +S L LKN+A+DM ++RQ +D + D+ +K +N R + L
Sbjct: 191 KQDEALTDLSALLGELKNMAVDMGTAIERQTNELDHLQDNADELNYRVKQSNQRARYLLR 250
Query: 235 K 235
K
Sbjct: 251 K 251
>sp|Q5R6Q2|STX6_PONAB Syntaxin-6 OS=Pongo abelii GN=STX6 PE=2 SV=1
Length = 255
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 134 WATSASNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQDQGLDVISEGLDTLKNL 193
W+T ++K + D + + F + +++ Q ++ +QD+ L+++S + LKN+
Sbjct: 132 WSTGTTDKYGRLDRELQRANSHFIEEQQAQQ-----QLIVEQQDEQLELVSGSIGVLKNM 186
Query: 194 ALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNFC 243
+ + EL+ Q ++++ +++ S L N +L + R +C
Sbjct: 187 SQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|O43752|STX6_HUMAN Syntaxin-6 OS=Homo sapiens GN=STX6 PE=1 SV=1
Length = 255
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 134 WATSASNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQDQGLDVISEGLDTLKNL 193
W+T ++K + D + + F + +++ Q ++ +QD+ L+++S + LKN+
Sbjct: 132 WSTGTTDKYGRLDRELQRANSHFIEEQQAQQ-----QLIVEQQDEQLELVSGSIGVLKNM 186
Query: 194 ALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNFC 243
+ + EL+ Q ++++ +++ S L N +L + R +C
Sbjct: 187 SQRIGGELEEQAVMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|Q5ZL19|STX6_CHICK Syntaxin-6 OS=Gallus gallus GN=STX6 PE=2 SV=1
Length = 254
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
+QD+ L+++S + LKN++ + EL+ Q ++D+ ++D S L N +L +
Sbjct: 167 QQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLDDFSHELDSTHSRLDNVMKKLAKVSH 226
Query: 235 KVRSSRNFC 243
R +C
Sbjct: 227 MTSDRRQWC 235
>sp|Q9JKK1|STX6_MOUSE Syntaxin-6 OS=Mus musculus GN=Stx6 PE=1 SV=1
Length = 255
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 133 GWATSASNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQDQGLDVISEGLDTLKN 192
W +++ + D + + + F + +++ Q ++ +QD+ L+++S + LKN
Sbjct: 131 SWNAGVADRYGRLDRELQLANSHFIEEQQAQQ-----QLIVEQQDEQLELVSGSIGVLKN 185
Query: 193 LALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNFC 243
++ + EL+ Q ++D+ +++ S L N +L + R +C
Sbjct: 186 MSQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|Q63635|STX6_RAT Syntaxin-6 OS=Rattus norvegicus GN=Stx6 PE=1 SV=1
Length = 255
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 134 WATSASNKNIKFDSDGNIGDDFFQQSEESSQFRQEYEMRKMKQDQGLDVISEGLDTLKNL 193
W +++ + D + + + F + +++ Q ++ +QD+ L+++S + LKN+
Sbjct: 132 WDAGVTDRYGRLDRELQLANSHFIEEQQAQQ-----QLIVEQQDEQLELVSGSIGVLKNM 186
Query: 194 ALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNFC 243
+ + EL+ Q ++D+ +++ S L N +L + R +C
Sbjct: 187 SQRIGGELEEQAVMLDDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWC 236
>sp|Q9HGN3|TLG1_SCHPO t-SNARE affecting a late Golgi compartment protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tlg1 PE=3 SV=1
Length = 225
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 181 DVISEGL-DTLKNL---ALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKV 236
DV+ +G+ DT+ N+ A M EEL +Q L+D +D ++ S L+ RLK+ +
Sbjct: 140 DVMLDGVYDTIGNIRGQAALMGEELGQQADLLDTLDNSIETTNSKLRRGMKRLKDFTIAS 199
Query: 237 RSSRNFC 243
S++ C
Sbjct: 200 ADSKSGC 206
>sp|Q5SQN1|SNP47_HUMAN Synaptosomal-associated protein 47 OS=Homo sapiens GN=SNAP47 PE=1
SV=3
Length = 464
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 183 ISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLK 230
+++ L +K LAL+ EL+RQ +D + VD+AT + +N R+K
Sbjct: 414 LTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMK 461
>sp|Q0P4A7|SNP47_DANRE Synaptosomal-associated protein 47 OS=Danio rerio GN=snap47 PE=2
SV=1
Length = 419
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 187 LDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETL 233
L LKNLAL+ EL+RQ +D + D AT ++ + R+++ L
Sbjct: 373 LQQLKNLALEAETELERQDEALDVLSCSTDHATMNINRHTRRMRKLL 419
>sp|A6LQB0|DNLJ_CLOB8 DNA ligase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB
8052) GN=ligA PE=3 SV=1
Length = 663
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 133 GWATSASNKNIKFDSDGNIGDDFFQQS-EESSQFRQEYEMRKMKQDQGLDV--------- 182
G A + N N+K + N+ F+ +E + F+ EM + + QGL V
Sbjct: 201 GAAGALRNLNVKETARRNLSAFFYDVGYKEGTPFKTYMEMMEFIKQQGLPVDDYIRVCTS 260
Query: 183 ---ISEGLDTLKNLALDMNEELDRQVPLIDEIDTK 214
I + +D ++++ D+N ++D V ID+I T+
Sbjct: 261 IEEIEKEIDYVRDIRFDLNYDIDGLVIAIDDIRTR 295
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 32.7 bits (73), Expect = 2.5, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 33 DDAFARFYATVESEIDKALLKAETASMETNRAAAVAMKAEVRRTKARLLEEVPKLQKLAR 92
D+AF R ++ EID+ + + ++ET + A + E+ +A LL++V KL +R
Sbjct: 1707 DEAFERNLEGLQKEIDQMIKELRRKNLETQKEIA---EDELVAAEA-LLKKVKKLFGESR 1762
Query: 93 KKVKGLSKEEQETRHDLVLGLSERIEAIPDGNTNATKANGGWATSASNKNIKFDSDGNIG 152
+ + + K+ +E D + + + + + +AN +A + N
Sbjct: 1763 GENEEMEKDLREKLADYKNKVDDAWDLLREATDKIREANRLFAVNQKNMTALEKK----- 1817
Query: 153 DDFFQQSEESSQFRQEYEMRKMKQDQGLDVISEG--LDTLKNLALDMNEELDRQV-PLID 209
+++ ES + + E ++ +G D++ E L N +D E++ ++ P+ +
Sbjct: 1818 ----KEAVESGKRQIENTLK-----EGNDILDEANRLADEINSIIDYVEDIQTKLPPMSE 1868
Query: 210 EIDTKVDKATSDLKNNNVRLK 230
E++ K+D + ++K+ + K
Sbjct: 1869 ELNDKIDDLSQEIKDRKLAEK 1889
>sp|O60499|STX10_HUMAN Syntaxin-10 OS=Homo sapiens GN=STX10 PE=1 SV=1
Length = 249
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLL 234
+QDQ L+++S + LK+++ + EELD Q ++D ++D S + +L +
Sbjct: 162 EQDQQLEMVSGSIQVLKHMSGRVGEELDEQGIMLDAFAQEMDHTQSRMDGVLRKLAKVSH 221
Query: 235 KVRSSRNFC 243
R +C
Sbjct: 222 MTSDRRQWC 230
>sp|Q94CG2|BET12_ARATH Bet1-like SNARE 1-2 OS=Arabidopsis thaliana GN=BET12 PE=2 SV=4
Length = 130
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 176 QDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLK 235
D+ L+ + + + LK + D++EE++ L+D++ K+D A + R K K
Sbjct: 39 NDEALENLQDRVSFLKRVTGDIHEEVENHNRLLDKVGNKMDSARGIMSGTINRFKLVFEK 98
Query: 236 VRSSRNFCIDIILLCVILGIASYLYQAL 263
+S+R C I ++ I YL + L
Sbjct: 99 -KSNRKSCKLIAYFVLLFLIMYYLIRLL 125
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 169 YEMRKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVR 228
+E+ + + ++ L+ + + + LK L+ D+NEE+D ++D + +D + L R
Sbjct: 31 HEINEHENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDRMGNDMDSSRGFLSGTMDR 90
Query: 229 LKETLLKVRSSRNFCIDIILLCVILGIASYLY 260
K T+ + +SSR + L+ +G+ +Y
Sbjct: 91 FK-TVFETKSSRRM---LTLVASFVGLFLVIY 118
>sp|O64791|SY124_ARATH Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1
Length = 303
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 159 SEESSQFRQEYEMRKMKQDQG----LDVISE-------------GLDTLKNLALDMNEEL 201
S ES F ++K Q+QG LD ISE L L + LDM +
Sbjct: 180 SGESENF-----LQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALV 234
Query: 202 DRQVPLIDEIDTKVDKATSDLKNNNVRLKETLLKVRSSRNF-CIDIILLCVILGI 255
+ Q +++I++ V KA+S ++ +L++ +SSR + C I+L V+ +
Sbjct: 235 ESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTCYAILLFIVVFAL 289
>sp|Q9SRV7|SY131_ARATH Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=3 SV=1
Length = 306
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 40/265 (15%)
Query: 16 KYDKYDIEKQRDLNAHGDDAFARFYATVES------EIDKALLKAETASMETNRAA-AVA 68
+ ++ DIE GD + F+ V+ ++DK L K + A ET A A
Sbjct: 15 RSNRSDIESGHGPGNSGDLGLSGFFKKVQEIEKQYEKLDKHLNKLQGAHEETKAVTKAPA 74
Query: 69 MKAEVRRTKARLLEEVPKLQKLARKKVKGLSKEEQETRHDLVLGLSERIEAIPDGNTNAT 128
MK+ +++ R ++EV ++ + + K++ L +E E R G ++ T A
Sbjct: 75 MKS-IKQRMERDVDEVGRISRFIKGKIEELDRENLENRTKPGCGKGTGVDRTRTATTIAV 133
Query: 129 KANGGWATS---ASNKNIK-----------FDSDGNIGD----DFFQQSEESSQFRQEYE 170
K S +NI+ F G D D ++ +S Q Q+
Sbjct: 134 KKKFKDKISEFQTLRQNIQQEYREVVERRVFTVTGQRADEEAIDRLIETGDSEQIFQKA- 192
Query: 171 MRKMKQDQGLDVISE-------------GLDTLKNLALDMNEELDRQVPLIDEIDTKVDK 217
+R+ + Q +D ++E L L+ + LDM +D Q ++D I+ V
Sbjct: 193 IREQGRGQIMDTLAEIQERHDAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSS 252
Query: 218 ATSDLKNNNVRLKETLLKVRSSRNF 242
A +++ N +L + + +SSR +
Sbjct: 253 AVDHVQSGNNQLTKAVKSQKSSRKW 277
>sp|Q755E7|HOT1_ASHGO High-osmolarity-induced transcription protein 1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HOT1 PE=3 SV=1
Length = 629
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 175 KQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDT-KVDKATSDLKNNNVRLKETL 233
+Q Q + SE ++ L +L ++ EL +QVP++D+ D + DK +DL N+ +
Sbjct: 174 QQQQIASMRSESMEMLGSLMKEV-RELKQQVPVLDDPDNNEKDKFVTDLLNSITNVSSNY 232
Query: 234 LKVRSSRNF 242
LK SSRN
Sbjct: 233 LKKVSSRNL 241
>sp|Q5NVG5|SNP25_PONAB Synaptosomal-associated protein 25 OS=Pongo abelii GN=SNAP25 PE=2
SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|P60881|SNP25_RAT Synaptosomal-associated protein 25 OS=Rattus norvegicus GN=Snap25
PE=1 SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|Q5R1X1|SNP25_PANTR Synaptosomal-associated protein 25 OS=Pan troglodytes GN=SNAP25
PE=2 SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|P60879|SNP25_MOUSE Synaptosomal-associated protein 25 OS=Mus musculus GN=Snap25 PE=1
SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|P60877|SNP25_MACMU Synaptosomal-associated protein 25 OS=Macaca mulatta GN=SNAP25 PE=2
SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|P60880|SNP25_HUMAN Synaptosomal-associated protein 25 OS=Homo sapiens GN=SNAP25 PE=1
SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|P60878|SNP25_CHICK Synaptosomal-associated protein 25 OS=Gallus gallus GN=SNAP25 PE=1
SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
>sp|Q17QQ3|SNP25_BOVIN Synaptosomal-associated protein 25 OS=Bos taurus GN=SNAP25 PE=1
SV=1
Length = 206
Score = 30.8 bits (68), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 172 RKMKQDQGLDVISEGLDTLKNLALDMNEELDRQVPLIDEIDTKVDKATSDLKNNNVRLKE 231
R+ + D+ L+ +S + L+++ALDM E+D Q ID I K D + + N R +
Sbjct: 142 RENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATK 201
Query: 232 TL 233
L
Sbjct: 202 ML 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,221,932
Number of Sequences: 539616
Number of extensions: 3645769
Number of successful extensions: 13935
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 13696
Number of HSP's gapped (non-prelim): 418
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)