BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039176
(282 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539475|ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
gi|223549917|gb|EEF51404.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
Length = 200
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/180 (97%), Positives = 176/180 (97%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MV S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|351723959|ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
gi|255627433|gb|ACU14061.1| unknown [Glycine max]
Length = 200
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 173/180 (96%), Positives = 175/180 (97%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MV+S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENE EGLKRKLTSKLGANSPALVPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|449432171|ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
Length = 200
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 171/180 (95%), Positives = 176/180 (97%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MVTSPVVNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP+L PDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|388513689|gb|AFK44906.1| unknown [Medicago truncatula]
Length = 200
Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 172/180 (95%), Positives = 174/180 (96%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M+ S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP LVPDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|356535879|ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Glycine max]
Length = 200
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 172/180 (95%), Positives = 174/180 (96%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MV+S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCK PGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQI ECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKXPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQISECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|225454123|ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Vitis vinifera]
gi|297745235|emb|CBI40315.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 172/177 (97%), Positives = 174/177 (98%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL ANS AL PDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
RPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 177
>gi|224134811|ref|XP_002321911.1| predicted protein [Populus trichocarpa]
gi|118487488|gb|ABK95571.1| unknown [Populus trichocarpa]
gi|222868907|gb|EEF06038.1| predicted protein [Populus trichocarpa]
Length = 202
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/177 (96%), Positives = 173/177 (97%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH
Sbjct: 6 SAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 65
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 167
ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA WWRPN
Sbjct: 66 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVATWWRPN 125
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
FETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 126 FETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 182
>gi|225470159|ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Vitis vinifera]
gi|147788664|emb|CAN61008.1| hypothetical protein VITISV_016616 [Vitis vinifera]
gi|302143896|emb|CBI22757.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 166/180 (92%), Positives = 174/180 (96%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M+TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARM+VNYMKEGMRT+V+AILLVQEH
Sbjct: 1 MLTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILLVQEHT 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL ANSP L PDWQIGECVAIWW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVAIWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|388515089|gb|AFK45606.1| unknown [Lotus japonicus]
Length = 200
Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/180 (95%), Positives = 173/180 (96%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MV+S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWR 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFETIMYPY PPHITKPKECKKLFLVHL EREYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETIMYPYRPPHITKPKECKKLFLVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|147796474|emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
Length = 244
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/214 (81%), Positives = 179/214 (83%), Gaps = 28/214 (13%)
Query: 38 EREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAI 97
E E +MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAI
Sbjct: 29 EVEARREMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAI 88
Query: 98 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGEN--------------------------- 130
LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGEN
Sbjct: 89 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENGAILDPLLRLLCMCIHVCMSYFFLKIF 148
Query: 131 -EIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKL 189
EIEGLKRKL+SKL ANS AL PDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKL
Sbjct: 149 AEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKL 208
Query: 190 FLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQ+W
Sbjct: 209 FIVHLSEREYFAVPKNLKLLAVPLFELYDNVQVW 242
>gi|90399078|emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 154/171 (90%), Positives = 164/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYG 182
>gi|297803568|ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata]
gi|297315504|gb|EFH45927.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata]
Length = 200
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 158/180 (87%), Positives = 171/180 (95%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M S VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENE++GLKRKLTSKLG NS ALVPDW++GECVA WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLTSKLGGNSAALVPDWKVGECVATWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET+MYPYCPPHITKPKECK+LF+VHLSE+EYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETMMYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|30686923|ref|NP_194285.2| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
gi|26451195|dbj|BAC42701.1| unknown protein [Arabidopsis thaliana]
gi|28973229|gb|AAO63939.1| unknown protein [Arabidopsis thaliana]
gi|110736890|dbj|BAF00402.1| hypothetical protein [Arabidopsis thaliana]
gi|332659676|gb|AEE85076.1| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
Length = 200
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 157/180 (87%), Positives = 169/180 (93%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M S VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPHILLLQIGNTFCKLPGGRLKPGENE +GLKRKLTSKLG NS ALVPDW +GECVA WW
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET+MYPYCPPHITKPKECK+L++VHLSE+EYFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|326499514|dbj|BAJ86068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 160/195 (82%), Positives = 174/195 (89%), Gaps = 3/195 (1%)
Query: 33 REREREREKESKMV---TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEG 89
R R E +MV +SPVVN YPL++YTFGTKE KMEKDTSVADRLARMKVNYMKEG
Sbjct: 54 RGSARPSEAGEEMVGAPSSPVVNVYPLANYTFGTKEAKMEKDTSVADRLARMKVNYMKEG 113
Query: 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA 149
MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGE+EIEGLKRKL SKL NSP+
Sbjct: 114 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGESEIEGLKRKLCSKLAVNSPS 173
Query: 150 LVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLL 209
P+WQ+GECVA WWRPNFET+MYPYCPPHI+KPKECKKLF+VHL+EREYFAVP+NLKLL
Sbjct: 174 FPPNWQVGECVAEWWRPNFETVMYPYCPPHISKPKECKKLFIVHLTEREYFAVPRNLKLL 233
Query: 210 AVPLFELYDNVQIWA 224
AVPLFELYDNVQ +
Sbjct: 234 AVPLFELYDNVQRYG 248
>gi|226508740|ref|NP_001148753.1| LOC100282369 [Zea mays]
gi|195621890|gb|ACG32775.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
gi|224032173|gb|ACN35162.1| unknown [Zea mays]
gi|413920017|gb|AFW59949.1| cleavage and polyadenylation specificity factor 5 isoform 1 [Zea
mays]
gi|413920018|gb|AFW59950.1| cleavage and polyadenylation specificity factor 5 isoform 2 [Zea
mays]
Length = 202
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 154/173 (89%), Positives = 165/173 (95%)
Query: 52 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 111
N YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL
Sbjct: 10 NVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI 171
QIGNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETV 129
Query: 172 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
MYPYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDN+Q +
Sbjct: 130 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYG 182
>gi|315259982|gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 223
Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 154/173 (89%), Positives = 165/173 (95%)
Query: 52 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 111
N YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL
Sbjct: 10 NVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 69
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI 171
QIGNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+
Sbjct: 70 QIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETV 129
Query: 172 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
MYPYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDN+Q +
Sbjct: 130 MYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQRYG 182
>gi|242077722|ref|XP_002448797.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
gi|241939980|gb|EES13125.1| hypothetical protein SORBIDRAFT_06g033360 [Sorghum bicolor]
Length = 202
Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 155/171 (90%), Positives = 164/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQIGECVA+WWRPNFET+MY
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQIGECVAVWWRPNFETVMY 131
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYG 182
>gi|226493713|ref|NP_001141685.1| uncharacterized protein LOC100273812 [Zea mays]
gi|194705542|gb|ACF86855.1| unknown [Zea mays]
gi|218195850|gb|EEC78277.1| hypothetical protein OsI_17973 [Oryza sativa Indica Group]
gi|222629797|gb|EEE61929.1| hypothetical protein OsJ_16671 [Oryza sativa Japonica Group]
gi|223944619|gb|ACN26393.1| unknown [Zea mays]
gi|414584722|tpg|DAA35293.1| TPA: cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 154/171 (90%), Positives = 164/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYG 182
>gi|115461402|ref|NP_001054301.1| Os04g0683100 [Oryza sativa Japonica Group]
gi|113565872|dbj|BAF16215.1| Os04g0683100, partial [Oryza sativa Japonica Group]
Length = 259
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 163/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 69 YPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 128
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 129 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 188
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 189 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYG 239
>gi|32488646|emb|CAE03439.1| OSJNBa0032F06.22 [Oryza sativa Japonica Group]
Length = 202
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 163/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADR ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQRYG 182
>gi|414584721|tpg|DAA35292.1| TPA: hypothetical protein ZEAMMB73_890316 [Zea mays]
Length = 186
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/168 (91%), Positives = 163/168 (97%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
PYCPPHITKPKECKKLF+VHLSEREYFAVP+NLKLLAVPLFELYDNVQ
Sbjct: 132 PYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQ 179
>gi|357166798|ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 152/171 (88%), Positives = 164/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 13 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 72
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEI+GLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 73 GNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 132
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHL+EREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 133 PYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYG 183
>gi|195622596|gb|ACG33128.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 202
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 153/171 (89%), Positives = 163/171 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI
Sbjct: 12 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 71
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEIEGLKRKL SKL NSP+ P+WQ+GECVA+WWRPNFET+MY
Sbjct: 72 GNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFETVMY 131
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PYCPPHITKPKECKKLF+VHL EREYFAVP+NLKLLAVPLFELYDNVQ +
Sbjct: 132 PYCPPHITKPKECKKLFIVHLFEREYFAVPRNLKLLAVPLFELYDNVQRYG 182
>gi|2980795|emb|CAA18171.1| putative protein [Arabidopsis thaliana]
Length = 210
Score = 326 bits (835), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 158/202 (78%), Positives = 170/202 (84%), Gaps = 21/202 (10%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M S VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGEN---------------EIEGLKRKLTSKLGANSPA 149
HPHILLLQIGNTFCKLPGGRLKPGEN E +GLKRKLTSKLG NS A
Sbjct: 61 HPHILLLQIGNTFCKLPGGRLKPGENGIQLPPFWVYYVVSAEADGLKRKLTSKLGGNSAA 120
Query: 150 LVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPK------ECKKLFLVHLSEREYFAVP 203
LVPDW +GECVA WWRPNFET+MYPYCPPHITKPK ECK+L++VHLSE+EYFAVP
Sbjct: 121 LVPDWTVGECVATWWRPNFETMMYPYCPPHITKPKVVKKHNECKRLYIVHLSEKEYFAVP 180
Query: 204 KNLKLLAVPLFELYDNVQIWAS 225
KNLKLLAVPLFELYDNVQ+ S
Sbjct: 181 KNLKLLAVPLFELYDNVQVGIS 202
>gi|357166800|ref|XP_003580857.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 144/168 (85%), Positives = 160/168 (95%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAI+LVQEHNHPH+LLLQI
Sbjct: 13 YPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAIMLVQEHNHPHVLLLQI 72
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
GNTFCKLPGGRLKPGENEI+GLKRKL SKLG NSP+ P+WQ+GECV +WWRPNF+ +MY
Sbjct: 73 GNTFCKLPGGRLKPGENEIDGLKRKLCSKLGVNSPSFPPNWQVGECVGVWWRPNFDNVMY 132
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
PYCPPHITKPKECKKLF+VHL+EREYFA+P+ LKL AVPLFE+YDNVQ
Sbjct: 133 PYCPPHITKPKECKKLFIVHLTEREYFAIPRKLKLRAVPLFEIYDNVQ 180
>gi|7269405|emb|CAB81365.1| putative protein [Arabidopsis thaliana]
Length = 209
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/199 (78%), Positives = 168/199 (84%), Gaps = 21/199 (10%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+ YMKEGMRTSVE ILLVQEHNHPH
Sbjct: 3 SQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKIKYMKEGMRTSVEGILLVQEHNHPH 62
Query: 108 ILLLQIGNTFCKLPGGRLKPGEN---------------EIEGLKRKLTSKLGANSPALVP 152
ILLLQIGNTFCKLPGGRLKPGEN E +GLKRKLTSKLG NS ALVP
Sbjct: 63 ILLLQIGNTFCKLPGGRLKPGENGIQLPPVWVYYVVSAEADGLKRKLTSKLGGNSAALVP 122
Query: 153 DWQIGECVAIWWRPNFETIMYPYCPPHITKPK------ECKKLFLVHLSEREYFAVPKNL 206
DW +GECVA WWRPNFET+MYPYCPPHITKPK ECK+L++VHLSE+EYFAVPKNL
Sbjct: 123 DWTVGECVATWWRPNFETMMYPYCPPHITKPKVVKKHNECKRLYIVHLSEKEYFAVPKNL 182
Query: 207 KLLAVPLFELYDNVQIWAS 225
KLLAVPLFELYDNVQ+ S
Sbjct: 183 KLLAVPLFELYDNVQVGIS 201
>gi|168012875|ref|XP_001759127.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689826|gb|EDQ76196.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 200
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 150/180 (83%), Positives = 163/180 (90%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
MV+ PVVN YPLSSYTFG+KE KMEKDTSVADRLARMK NYMKEGMRTSVE ILLVQEHN
Sbjct: 1 MVSGPVVNVYPLSSYTFGSKEAKMEKDTSVADRLARMKQNYMKEGMRTSVEGILLVQEHN 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPH+LLLQIGNTF KLPGGRLK GENEIEGLKRKLTSKL + ++ P+WQIGEC A+WW
Sbjct: 61 HPHVLLLQIGNTFFKLPGGRLKTGENEIEGLKRKLTSKLAPTASSIQPEWQIGECAAMWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET++YPY PPHITKPKECKKLF+V LSER+YFAVPKNLKLLAVPLFELYDNVQ +
Sbjct: 121 RPNFETLLYPYQPPHITKPKECKKLFVVCLSERQYFAVPKNLKLLAVPLFELYDNVQRYG 180
>gi|116779420|gb|ABK21275.1| unknown [Picea sitchensis]
Length = 177
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/154 (94%), Positives = 150/154 (97%)
Query: 68 MEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKP 127
MEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKP
Sbjct: 1 MEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKP 60
Query: 128 GENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECK 187
GENE+EGLKRKL+SKL ANS L PDWQIGECVA+WWRPNFET+MYPYCPPHITKPKECK
Sbjct: 61 GENEVEGLKRKLSSKLAANSTTLQPDWQIGECVAVWWRPNFETLMYPYCPPHITKPKECK 120
Query: 188 KLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
KLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ
Sbjct: 121 KLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 154
>gi|224285141|gb|ACN40298.1| unknown [Picea sitchensis]
Length = 198
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 118/180 (65%), Positives = 148/180 (82%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M + VV +PLS Y+FG KE K++KD ++DRL RM+ N+M++G+RT VE ILLV E+
Sbjct: 1 MSSHLVVKVHPLSCYSFGKKEAKVDKDIFLSDRLDRMRANFMRDGLRTYVEGILLVYEYG 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPH+LLLQ GN +LPGGRL+PGENEIEGLKRKLTSKL ++S ++ P WQIGEC +WW
Sbjct: 61 HPHLLLLQKGNKIIRLPGGRLRPGENEIEGLKRKLTSKLSSSSSSVQPIWQIGECAGVWW 120
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET+MYPYCPPHI KPKECKK+F+VHLSE + F +PKNLK+LAVPLFEL+DNV+ +
Sbjct: 121 RPNFETLMYPYCPPHINKPKECKKIFIVHLSENQCFEIPKNLKILAVPLFELFDNVEKYG 180
>gi|440795771|gb|ELR16887.1| cleavage and polyadenylation specific factor 5, putative
[Acanthamoeba castellanii str. Neff]
Length = 217
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/174 (68%), Positives = 138/174 (79%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N Y L YTFG KE +MEKDTSVA RL RMK Y +EGMR +V+A+LLV +HNHPH+LL
Sbjct: 26 INLYNLEKYTFGKKEAQMEKDTSVAARLLRMKDMYEREGMRRTVDAVLLVHQHNHPHVLL 85
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQIGNTF KLPGGRLKPGENE++GLKRKLT KL N DW++GE + WWRPNFET
Sbjct: 86 LQIGNTFFKLPGGRLKPGENEVDGLKRKLTKKLAPNYSNYQLDWEVGELLCQWWRPNFET 145
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
+ YPY PPHIT+PKECKK+FLV L ER FAVPKNLKLLAVP+F+LYDN +
Sbjct: 146 LQYPYIPPHITRPKECKKIFLVQLPERCVFAVPKNLKLLAVPIFDLYDNASQYG 199
>gi|302836914|ref|XP_002950017.1| hypothetical protein VOLCADRAFT_59795 [Volvox carteri f.
nagariensis]
gi|300264926|gb|EFJ49120.1| hypothetical protein VOLCADRAFT_59795 [Volvox carteri f.
nagariensis]
Length = 232
Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 109/172 (63%), Positives = 145/172 (84%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
PV N YP+ +Y+FGTK PK+EKD++V +RL+R+K NY KEGMR S EAILLVQEHNHPH+
Sbjct: 7 PVFNVYPVGNYSFGTKAPKLEKDSNVNERLSRLKANYEKEGMRRSAEAILLVQEHNHPHV 66
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNF 168
LL Q+G +F +LPGGRL+PGE+E+EGL+RKL+++L + AL W +GE +++++RPNF
Sbjct: 67 LLFQLGQSFFRLPGGRLRPGEDEVEGLRRKLSNRLAPTNAALQVVWDVGEVLSVFYRPNF 126
Query: 169 ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+T+ YPY PPHIT+PKEC+KLF+V L ER FAVPKN+KL+AVP+FELYDN+
Sbjct: 127 DTMFYPYVPPHITRPKECRKLFVVQLPERCVFAVPKNMKLVAVPVFELYDNI 178
>gi|159480710|ref|XP_001698425.1| hypothetical protein CHLREDRAFT_77351 [Chlamydomonas reinhardtii]
gi|158282165|gb|EDP07918.1| predicted protein [Chlamydomonas reinhardtii]
Length = 199
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 141/172 (81%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
PV N YPL++YTFG K+PK+EKDTSV +RLAR++ +Y + GMR SVEA+L+VQEHN PH+
Sbjct: 7 PVYNVYPLTNYTFGNKQPKLEKDTSVQERLARLRSSYEQHGMRRSVEAVLVVQEHNTPHV 66
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNF 168
LLLQ+G KLPGGRL+PGE E+EGL+RKLT+ L +P+L W +GE + +++RPNF
Sbjct: 67 LLLQLGLNHFKLPGGRLRPGEEEVEGLRRKLTNTLAPANPSLHITWDVGEVLGVFYRPNF 126
Query: 169 ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+T+ YPY PPHIT+PKE +KLF+V L ER FAVPKN++L+AVPLF+L+DN+
Sbjct: 127 DTVFYPYVPPHITRPKESRKLFVVQLPERCVFAVPKNMRLVAVPLFDLHDNL 178
>gi|281206750|gb|EFA80935.1| NUDIX hydrolase family protein [Polysphondylium pallidum PN500]
Length = 199
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 141/185 (76%), Gaps = 4/185 (2%)
Query: 59 YTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFC 118
Y+FGTKEP EKD+SV RLARMK N+ KEG+R +VEAI++V HNHPHILLL+I NTF
Sbjct: 11 YSFGTKEPVKEKDSSVVSRLARMKENFEKEGLRKTVEAIIIVHNHNHPHILLLKIANTFF 70
Query: 119 KLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD-WQIGECVAIWWRPNFETIMYPYCP 177
KLPGG+LKPGENEI+GL RKLT KL ++ W++GE +A WWRPNFE I+YPY P
Sbjct: 71 KLPGGKLKPGENEIDGLIRKLTKKLSPIGTSVSDSPWEVGENIATWWRPNFEQILYPYIP 130
Query: 178 PHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYFNHSSTAFQIP 237
PHITKPKECKKL++V L E+ FAVP NL+L+AVPLFE+Y+N Q + + S+ Q+
Sbjct: 131 PHITKPKECKKLYVVTLPEKCTFAVPSNLELIAVPLFEIYNNSQRYGAII---SSIPQLI 187
Query: 238 VQYDY 242
+Y Y
Sbjct: 188 SKYHY 192
>gi|307107193|gb|EFN55436.1| hypothetical protein CHLNCDRAFT_12869, partial [Chlorella
variabilis]
Length = 185
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 132/172 (76%)
Query: 53 TYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ 112
YP+ +YTFG+K PK EKD+SV RL R+K Y +EG+R SVEA+L+V EH HPH+L+LQ
Sbjct: 1 VYPVGNYTFGSKPPKFEKDSSVTQRLERLKEKYAREGLRRSVEAVLVVHEHGHPHVLVLQ 60
Query: 113 IGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIM 172
+G +F KLPGGRL+PGE+E EG+ RKL S L + + PDW++ + + WWRPNFE +M
Sbjct: 61 MGASFFKLPGGRLRPGEDEAEGMLRKLHSLLAPPAENMRPDWRVSDLLGTWWRPNFENMM 120
Query: 173 YPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPYCP H+ +PKE K+LFL+ L ER Y +VPKN++L+AVPLFELYDN+ +
Sbjct: 121 YPYCPAHVARPKEVKRLFLIALPERCYLSVPKNMRLVAVPLFELYDNISRYG 172
>gi|389743616|gb|EIM84800.1| cleavage and polyadenylation specific factor 5 [Stereum hirsutum
FP-91666 SS1]
Length = 204
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKESQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLKR+L +L S + DW+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPAESRQFNTSHGMDNDWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + E++ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|169863260|ref|XP_001838252.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea
okayama7#130]
gi|116500725|gb|EAU83620.1| cleavage and polyadenylation specific factor 5 [Coprinopsis cinerea
okayama7#130]
Length = 204
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA--------LVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLK++L +L S + + DW+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSNSQQFDQNHGIDNDWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|393214871|gb|EJD00363.1| cleavage and polyadenylation specific factor 5 [Fomitiporia
mediterranea MF3/22]
Length = 204
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SVA RL R++ NY GMR +VE +L+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVAARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA--------LVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLKR+L +L S + + DW+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKRRLDERLAPPSESRQFNTTHGIDNDWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + E++ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|403411800|emb|CCL98500.1| predicted protein [Fibroporia radiculosa]
Length = 204
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLKR+L +L +S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPTDSRQFNSSHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|390594815|gb|EIN04224.1| cleavage and polyadenylation specific factor 5 [Punctularia
strigosozonata HHB-11173 SS5]
Length = 204
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SVA RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVAARLQRLQNNYEDWGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLKR+L +L S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKRRLDDRLAPPTNSSQFNASHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|409041750|gb|EKM51235.1| hypothetical protein PHACADRAFT_263266 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE +L+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLK++L +L S + DW+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPQDSRQFNASHGVDNDWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|242217376|ref|XP_002474488.1| predicted protein [Postia placenta Mad-698-R]
gi|220726343|gb|EED80295.1| predicted protein [Postia placenta Mad-698-R]
Length = 204
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EI+GLKR+L +L +S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIDGLKRRLDERLAPPTNTQQFDSSHGMGNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|449544756|gb|EMD35728.1| hypothetical protein CERSUDRAFT_115687 [Ceriporiopsis subvermispora
B]
Length = 204
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLKR+L +L S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKRRLDERLAPPTNSSQFNASHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|395329711|gb|EJF62097.1| cleavage and polyadenylation specific factor 5 [Dichomitus squalens
LYAD-421 SS1]
Length = 204
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 133/181 (73%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLK++L +L +S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPTDSRQFNSSHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|336369060|gb|EGN97402.1| hypothetical protein SERLA73DRAFT_110607 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381841|gb|EGO22992.1| hypothetical protein SERLADRAFT_471586 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EI+GLKR+L +L S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIDGLKRRLDDRLAPPTESRQFNASHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|402218179|gb|EJT98257.1| cleavage and polyadenylation specific factor 5 [Dacryopinax sp.
DJM-731 SS1]
Length = 199
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 132/175 (75%), Gaps = 3/175 (1%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SVA RL R++ NY GMR +VE +L+V +H HPH
Sbjct: 2 SQTIILYPLSNFTFTTKEAQPEEDPSVAARLQRLQNNYEDYGMRRTVEGVLVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL---VPDWQIGECVAIWW 164
IL+LQI N F KLPG +KPGE+E+EGLK++L +L SP +W+IG+C+A WW
Sbjct: 62 ILMLQIANAFFKLPGDYVKPGEDEVEGLKKRLDVRLEPTSPPYSESTDNWEIGDCLAQWW 121
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
RPNFET MYP+ P H+TKPKECKK+FLV L E++ AVPKN+KLLAVPLFELYDN
Sbjct: 122 RPNFETFMYPFIPAHVTKPKECKKMFLVQLPEKKVMAVPKNMKLLAVPLFELYDN 176
>gi|392588671|gb|EIW78003.1| cleavage and polyadenylation specificity factor 25 kDa subunit
[Coniophora puteana RWD-64-598 SS2]
Length = 204
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EI+GLKR+L +L S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIDGLKRRLDDRLAPPPESRQFNASHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|321458629|gb|EFX69694.1| hypothetical protein DAPPUDRAFT_202691 [Daphnia pulex]
Length = 232
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 125/175 (71%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPLS+YTFGTK+P E+D SV R RM+ + K GMR SVE ILLV EH PH+L
Sbjct: 41 TINLYPLSNYTFGTKDPLFERDPSVPARFQRMREEFDKVGMRRSVEGILLVHEHGLPHVL 100
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE++IEGLKR LT LG +V DW I + V WWRPNFE
Sbjct: 101 LLQLGTTFFKLPGGELNPGEDDIEGLKRLLTEILGRQD-GVVQDWLIEDSVGNWWRPNFE 159
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 160 PPQYPYIPPHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYG 214
>gi|392559578|gb|EIW52762.1| cleavage and polyadenylation specific factor 5 [Trametes versicolor
FP-101664 SS1]
Length = 204
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLK++L +L S + +W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPTDSKQFNASHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|393230751|gb|EJD38352.1| cleavage and polyadenylation specific factor 5 [Auricularia
delicata TFB-10046 SS5]
Length = 206
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 132/181 (72%), Gaps = 11/181 (6%)
Query: 51 VNT---YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
VNT YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 4 VNTVLLYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 63
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+E EGLK +L +L +S + DW+IG+C
Sbjct: 64 ILMLQIANAFFKLPGDYLKPGEDEFEGLKARLDDRLAPPTNSVQFNSSHGIDNDWEIGDC 123
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYDN
Sbjct: 124 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYDN 183
Query: 220 V 220
Sbjct: 184 A 184
>gi|353237909|emb|CCA69870.1| hypothetical protein PIIN_03809 [Piriformospora indica DSM 11827]
Length = 205
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 133/183 (72%), Gaps = 11/183 (6%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S +N YPLS++TF TKE + E+D SVA RL R++ NY GMR +VE +L+V +H HPH
Sbjct: 2 SNTINLYPLSNFTFSTKESQPEEDPSVAARLQRLQNNYEDYGMRHTVEGVLVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA----------LVPDWQIG 157
IL+LQI N F KLPG LKPGE EI+GLK +L +L A +P + DW+IG
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEEEIQGLKARLDERL-APTPGTAFQFTEQHGIDNDWEIG 120
Query: 158 ECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELY 217
+C+A WWRPNFET MYP+ P HITKPKECKKL+LV + ER+ AVPKN+KLLA+PLFELY
Sbjct: 121 DCLAQWWRPNFETFMYPFVPAHITKPKECKKLYLVQMPERKVLAVPKNMKLLAIPLFELY 180
Query: 218 DNV 220
DN
Sbjct: 181 DNA 183
>gi|170111950|ref|XP_001887178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637952|gb|EDR02233.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 205
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 132/182 (72%), Gaps = 9/182 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD---------WQIGE 158
IL+LQI N F KLPG LKPGE+EI+GLKR+L +L + + D W+IG+
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIDGLKRRLDERLAPPADSRQFDQATHGVDNEWEIGD 121
Query: 159 CVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYD 218
C+A WWRPNFET MYP+ P HITKPKECKKLFLV + ER+ AVPKN+KLLA+PLFELYD
Sbjct: 122 CLAQWWRPNFETFMYPFIPAHITKPKECKKLFLVQMPERKVLAVPKNMKLLAIPLFELYD 181
Query: 219 NV 220
N
Sbjct: 182 NA 183
>gi|119390446|pdb|2J8Q|A Chain A, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5) In Complex With A Sulphate
Ion.
gi|119390447|pdb|2J8Q|B Chain B, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5) In Complex With A Sulphate
Ion
Length = 227
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|109157347|pdb|2CL3|A Chain A, Crystal Structure Of Human Cleavage And Polyadenylation
Specificity Factor 5 (Cpsf5)
gi|301016059|pdb|3N9U|A Chain A, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
gi|301016060|pdb|3N9U|B Chain B, Crystal Structure Of The Complex Between The 25 Kda
Subunit And The 59 Kda Subunit (Rrm Domain) Of Human
Cleavage Factor Im
Length = 230
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 157
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 208
>gi|409075896|gb|EKM76271.1| hypothetical protein AGABI1DRAFT_108837 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192977|gb|EKV42912.1| hypothetical protein AGABI2DRAFT_188493 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 132/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE +L+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDYGMRRTVEGVLVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD--------WQIGEC 159
IL+LQI N F KLPG LKPGE+EIEGLK++L +L S + D W+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEIEGLKKRLDDRLAPPSHSQQFDSTHGVDNEWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + E++ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|197128966|gb|ACH45464.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 233
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 130/192 (67%), Gaps = 8/192 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA----- 224
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN +
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISS 214
Query: 225 --SYFNHSSTAF 234
S F ST F
Sbjct: 215 LPSTFEXGSTLF 226
>gi|302683230|ref|XP_003031296.1| hypothetical protein SCHCODRAFT_77075 [Schizophyllum commune H4-8]
gi|300104988|gb|EFI96393.1| hypothetical protein SCHCODRAFT_77075 [Schizophyllum commune H4-8]
Length = 204
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 131/181 (72%), Gaps = 8/181 (4%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS++TF TKE + E+D SV+ RL R++ NY GMR +VE +L+V +H HPH
Sbjct: 2 SNTIALYPLSNFTFSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGVLVVHDHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA--------NSPALVPDWQIGEC 159
IL+LQI N F KLPG LKPGE+E++GLKR+L +L + DW+IG+C
Sbjct: 62 ILMLQIANAFFKLPGDYLKPGEDEVDGLKRRLDERLAPPNASSQFNQAHGAENDWEIGDC 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNFET MYP+ P HITKPKECKKLFLV + E++ AVPKN+KLLA+PLFELYDN
Sbjct: 122 LAQWWRPNFETFMYPFVPAHITKPKECKKLFLVQMPEKKVLAVPKNMKLLAIPLFELYDN 181
Query: 220 V 220
Sbjct: 182 A 182
>gi|328875182|gb|EGG23547.1| NUDIX hydrolase family protein [Dictyostelium fasciculatum]
Length = 203
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 133/173 (76%), Gaps = 6/173 (3%)
Query: 57 SSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 116
+SY+FG KEP EKD +VA RL RMK + KEG R +VE+I++V EHNHPHILLLQ+ N+
Sbjct: 11 TSYSFGIKEPVAEKDATVAQRLTRMKETFDKEGTRKTVESIIIVHEHNHPHILLLQMSNS 70
Query: 117 FCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD---WQIGECVAIWWRPNFET-IM 172
+ KLPGG+LKPGENE++GL RKLT KL A PD W+IGE V+ WWRP+FE
Sbjct: 71 YFKLPGGKLKPGENEVDGLIRKLTKKLSPIGTA--PDDSPWEIGELVSTWWRPSFEQHTF 128
Query: 173 YPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
YPY PPHI+KPKECKKL++V L E+ FAVP+NLKL+AVPLFELY+N Q + S
Sbjct: 129 YPYIPPHISKPKECKKLYVVTLPEKCTFAVPQNLKLIAVPLFELYNNQQRYGS 181
>gi|61371857|gb|AAX43744.1| cleavage and polyadenylation specific factor 5 [synthetic
construct]
Length = 228
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|387015292|gb|AFJ49765.1| Cleavage and polyadenylation specificity factor subunit 5 [Crotalus
adamanteus]
Length = 227
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|323463104|pdb|3Q2S|A Chain A, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463105|pdb|3Q2S|B Chain B, Crystal Structure Of Cfim68 RrmCFIM25 COMPLEX
gi|323463108|pdb|3Q2T|A Chain A, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
gi|323463109|pdb|3Q2T|B Chain B, Crystal Structure Of Cfim68 RrmCFIM25RNA COMPLEX
Length = 207
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 16 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 75
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 76 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 134
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 135 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 185
>gi|5901926|ref|NP_008937.1| cleavage and polyadenylation specificity factor subunit 5 [Homo
sapiens]
gi|78369318|ref|NP_001030408.1| cleavage and polyadenylation specificity factor subunit 5 [Bos
taurus]
gi|197101936|ref|NP_001125721.1| cleavage and polyadenylation specificity factor subunit 5 [Pongo
abelii]
gi|114662616|ref|XP_510978.2| PREDICTED: uncharacterized protein LOC454100 [Pan troglodytes]
gi|296231113|ref|XP_002761011.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Callithrix jacchus]
gi|332227869|ref|XP_003263115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Nomascus leucogenys]
gi|402908439|ref|XP_003916948.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Papio anubis]
gi|403305942|ref|XP_003943506.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Saimiri boliviensis boliviensis]
gi|410050346|ref|XP_003952896.1| PREDICTED: uncharacterized protein LOC454100 [Pan troglodytes]
gi|426242385|ref|XP_004015053.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Ovis aries]
gi|74735411|sp|O43809.1|CPSF5_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Cleavage and polyadenylation
specificity factor 25 kDa subunit; Short=CFIm25;
Short=CPSF 25 kDa subunit; AltName: Full=Nucleoside
diphosphate-linked moiety X motif 21; Short=Nudix motif
21; AltName: Full=Pre-mRNA cleavage factor Im 25 kDa
subunit
gi|75041887|sp|Q5RAI8.1|CPSF5_PONAB RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|88911280|sp|Q3ZCA2.1|CPSF5_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|297343088|pdb|3MDG|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uuguau
gi|297343089|pdb|3MDG|B Chain B, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uuguau
gi|297343091|pdb|3MDI|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uguaaa
gi|297343092|pdb|3MDI|B Chain B, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im In Complex With Rna Uguaaa
gi|2887288|emb|CAA05026.1| pre-mRNA cleavage factor I 25 kDa subunit [Homo sapiens]
gi|12655103|gb|AAH01403.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Homo
sapiens]
gi|55728968|emb|CAH91222.1| hypothetical protein [Pongo abelii]
gi|73586913|gb|AAI02698.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Bos
taurus]
gi|90079113|dbj|BAE89236.1| unnamed protein product [Macaca fascicularis]
gi|119603265|gb|EAW82859.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21,
isoform CRA_a [Homo sapiens]
gi|119603266|gb|EAW82860.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21,
isoform CRA_a [Homo sapiens]
gi|123982654|gb|ABM83068.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
gi|123997321|gb|ABM86262.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
gi|296477965|tpg|DAA20080.1| TPA: cleavage and polyadenylation specificity factor subunit 5 [Bos
taurus]
gi|355710208|gb|EHH31672.1| Cleavage and polyadenylation specificity factor 25 kDa subunit
[Macaca mulatta]
gi|355756786|gb|EHH60394.1| Cleavage and polyadenylation specificity factor 25 kDa subunit
[Macaca fascicularis]
gi|380783941|gb|AFE63846.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|383411307|gb|AFH28867.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|384943114|gb|AFI35162.1| cleavage and polyadenylation specificity factor subunit 5 [Macaca
mulatta]
gi|410227088|gb|JAA10763.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410267142|gb|JAA21537.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410289374|gb|JAA23287.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|410342431|gb|JAA40162.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Pan
troglodytes]
gi|440902614|gb|ELR53384.1| Cleavage and polyadenylation specificity factor subunit 5 [Bos
grunniens mutus]
Length = 227
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|168177228|pdb|3BHO|A Chain A, Crystal Structure Of The 25kda Subunit Of Human Cleavage
Factor Im With Ap4a
Length = 208
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 17 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 76
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 77 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 135
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 136 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 186
>gi|13386106|ref|NP_080899.1| cleavage and polyadenylation specificity factor subunit 5 [Mus
musculus]
gi|84781636|ref|NP_001034093.1| cleavage and polyadenylation specificity factor subunit 5 [Rattus
norvegicus]
gi|73950369|ref|XP_535298.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Canis lupus familiaris]
gi|126296153|ref|XP_001364759.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Monodelphis domestica]
gi|194208617|ref|XP_001915145.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Equus caballus]
gi|291390150|ref|XP_002711573.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
gi|344289245|ref|XP_003416355.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Loxodonta africana]
gi|348572714|ref|XP_003472137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cavia porcellus]
gi|354482938|ref|XP_003503652.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cricetulus griseus]
gi|395505985|ref|XP_003757316.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Sarcophilus harrisii]
gi|395839444|ref|XP_003792599.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Otolemur garnettii]
gi|410983545|ref|XP_003998099.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Felis catus]
gi|81880378|sp|Q9CQF3.1|CPSF5_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|88911281|sp|Q4KM65.1|CPSF5_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5; AltName: Full=Nucleoside diphosphate-linked
moiety X motif 21; Short=Nudix motif 21
gi|12847971|dbj|BAB27778.1| unnamed protein product [Mus musculus]
gi|12859636|dbj|BAB31718.1| unnamed protein product [Mus musculus]
gi|14198424|gb|AAH08270.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|60551046|gb|AAH90834.1| Nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|68534752|gb|AAH98748.1| Cleavage and polyadenylation specific factor 5 [Rattus norvegicus]
gi|74151031|dbj|BAE27645.1| unnamed protein product [Mus musculus]
gi|74227593|dbj|BAE35655.1| unnamed protein product [Mus musculus]
gi|148679165|gb|EDL11112.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Mus
musculus]
gi|149032465|gb|EDL87356.1| rCG39081 [Rattus norvegicus]
gi|195539864|gb|AAI68149.1| Cleavage and polyadenylation specific factor 5 [Rattus norvegicus]
gi|417397455|gb|JAA45761.1| Putative mrna cleavage factor i subunit [Desmodus rotundus]
gi|431914138|gb|ELK15397.1| Cleavage and polyadenylation specificity factor subunit 5 [Pteropus
alecto]
Length = 227
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|346716318|ref|NP_001231176.1| cleavage and polyadenylation specificity factor subunit 5 [Sus
scrofa]
Length = 227
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|310942946|pdb|3P5T|A Chain A, Cfim25-Cfim68 Complex
gi|310942947|pdb|3P5T|B Chain B, Cfim25-Cfim68 Complex
gi|310942948|pdb|3P5T|C Chain C, Cfim25-Cfim68 Complex
gi|310942949|pdb|3P5T|D Chain D, Cfim25-Cfim68 Complex
gi|310942950|pdb|3P5T|E Chain E, Cfim25-Cfim68 Complex
gi|310942951|pdb|3P5T|F Chain F, Cfim25-Cfim68 Complex
gi|310942962|pdb|3P6Y|A Chain A, Cf Im25-Cf Im68-Uguaa Complex
gi|310942963|pdb|3P6Y|B Chain B, Cf Im25-Cf Im68-Uguaa Complex
gi|310942966|pdb|3P6Y|E Chain E, Cf Im25-Cf Im68-Uguaa Complex
gi|310942967|pdb|3P6Y|F Chain F, Cf Im25-Cf Im68-Uguaa Complex
gi|310942970|pdb|3P6Y|I Chain I, Cf Im25-Cf Im68-Uguaa Complex
gi|310942971|pdb|3P6Y|J Chain J, Cf Im25-Cf Im68-Uguaa Complex
gi|310942974|pdb|3P6Y|M Chain M, Cf Im25-Cf Im68-Uguaa Complex
gi|310942975|pdb|3P6Y|N Chain N, Cf Im25-Cf Im68-Uguaa Complex
Length = 202
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 3 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 62
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 63 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 121
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 122 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 172
>gi|351707659|gb|EHB10578.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Heterocephalus glaber]
Length = 222
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|31873228|emb|CAD97606.1| hypothetical protein [Homo sapiens]
gi|117644806|emb|CAL37869.1| hypothetical protein [synthetic construct]
gi|117645262|emb|CAL38097.1| hypothetical protein [synthetic construct]
gi|307684412|dbj|BAJ20246.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[synthetic construct]
Length = 227
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|397506630|ref|XP_003823828.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5 [Pan paniscus]
Length = 227
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|355708272|gb|AES03219.1| nudix -type motif 21 [Mustela putorius furo]
Length = 225
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 35 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 94
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 95 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 153
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 154 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 204
>gi|345778528|ref|XP_003431738.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Canis lupus familiaris]
Length = 234
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 125/171 (73%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 43 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHQLPHVL 102
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 103 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 161
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 162 HPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 212
>gi|118488203|gb|ABK95921.1| unknown [Populus trichocarpa]
Length = 148
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/109 (97%), Positives = 107/109 (98%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH
Sbjct: 6 SAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 65
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQI 156
ILLLQIGNTFCKLPGGRLKPGENE EGLKRKLTSKLGANSPALVPDWQ+
Sbjct: 66 ILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQL 114
>gi|392876462|gb|AFM87063.1| putative cleavage and polyadenylation specific factor 5
[Callorhinchus milii]
gi|392879578|gb|AFM88621.1| putative cleavage and polyadenylation specific factor 5
[Callorhinchus milii]
Length = 226
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 35 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVL 94
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 95 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 153
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 154 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 204
>gi|449282555|gb|EMC89388.1| Cleavage and polyadenylation specificity factor subunit 5, partial
[Columba livia]
Length = 206
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|345319194|ref|XP_001520801.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Ornithorhynchus anatinus]
Length = 208
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 17 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 76
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 77 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 135
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 136 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 186
>gi|62859619|ref|NP_001017262.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
gi|89267892|emb|CAJ83328.1| cleavage and polyadenylation specific factor 5 [Xenopus (Silurana)
tropicalis]
gi|161612284|gb|AAI55975.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
gi|165971084|gb|AAI58238.1| nudix (nucleoside diphosphate linked moiety X)-type motif 21
[Xenopus (Silurana) tropicalis]
Length = 227
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|18417474|ref|NP_567835.1| CFIM-25-like protein [Arabidopsis thaliana]
gi|15081674|gb|AAK82492.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|20147173|gb|AAM10303.1| AT4g29820/F27B13_60 [Arabidopsis thaliana]
gi|21554114|gb|AAM63194.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|332660282|gb|AEE85682.1| CFIM-25-like protein [Arabidopsis thaliana]
Length = 222
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 140/205 (68%), Gaps = 4/205 (1%)
Query: 20 GEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLA 79
GE+ R +D E + + +V +V+ YPLSSY FG+KE KD ++DR+
Sbjct: 2 GEEARALDM----EEISDNTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDRVI 57
Query: 80 RMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL 139
R+K NY G+RT VEA+LLV+ HPH+LLLQ N+ KLPGGRL+PGE++IEGLKRKL
Sbjct: 58 RLKSNYAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKL 117
Query: 140 TSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREY 199
SKL N V +++GEC+ +WWRPNFET+MYP+ PP+I PKEC KLFLV L +
Sbjct: 118 ASKLSVNENVGVSGYEVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQ 177
Query: 200 FAVPKNLKLLAVPLFELYDNVQIWA 224
F VPKN KLLAVPL +L++N + +
Sbjct: 178 FVVPKNFKLLAVPLCQLHENEKTYG 202
>gi|148235158|ref|NP_001086401.1| cleavage and polyadenylation specificity factor subunit 5 [Xenopus
laevis]
gi|82183583|sp|Q6DJE4.1|CPSF5_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|49522181|gb|AAH75235.1| MGC84447 protein [Xenopus laevis]
Length = 227
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|350539753|ref|NP_001232732.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|363738015|ref|XP_003641943.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Gallus gallus]
gi|197128967|gb|ACH45465.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128968|gb|ACH45466.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128969|gb|ACH45467.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
gi|197128971|gb|ACH45469.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 227
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|410913111|ref|XP_003970032.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Takifugu rubripes]
Length = 229
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 97
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 156
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 207
>gi|47230369|emb|CAF99562.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 97
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 156
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 207
>gi|74138675|dbj|BAE27154.1| unnamed protein product [Mus musculus]
Length = 227
Score = 220 bits (560), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGEFNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|348509546|ref|XP_003442309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oreochromis niloticus]
Length = 227
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|41055411|ref|NP_957411.1| cleavage and polyadenylation specificity factor subunit 5 [Danio
rerio]
gi|82188244|sp|Q7T3C6.1|CPSF5_DANRE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|31418817|gb|AAH53172.1| Cleavage and polyadenylation specific factor 5 [Danio rerio]
gi|182891874|gb|AAI65427.1| Cpsf5 protein [Danio rerio]
Length = 228
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 37 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVL 96
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 97 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 155
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 156 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 206
>gi|327287824|ref|XP_003228628.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Anolis carolinensis]
Length = 227
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFLRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|432852419|ref|XP_004067238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oryzias latipes]
Length = 229
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 38 TINLYPLTNYTFGTKEPLYEKDGSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 97
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 98 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 156
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 157 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 207
>gi|189053429|dbj|BAG35595.1| unnamed protein product [Homo sapiens]
Length = 227
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVTDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|318192410|ref|NP_001188025.1| cleavage and polyadenylation specificity factor subunit 5
[Ictalurus punctatus]
gi|308324627|gb|ADO29448.1| cleavage and polyadenylation specificity factor subunit 5
[Ictalurus punctatus]
Length = 228
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 37 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVL 96
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 97 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 155
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 156 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 206
>gi|197128970|gb|ACH45468.1| putative cleavage and polyadenylation specific factor 5
[Taeniopygia guttata]
Length = 227
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVQQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FA PKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAAPKNYKLVAAPLFELYDNA 205
>gi|48145955|emb|CAG33200.1| CPSF5 [Homo sapiens]
Length = 227
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EK +SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|384247444|gb|EIE20931.1| cleavage and polyadenylation specificity factor, 25 kDa subunit
[Coccomyxa subellipsoidea C-169]
Length = 223
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 130/171 (76%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YP+++Y FG+K K EKDT+V RL+R + Y KEG+R SV+A+LLV EHNHPH+L
Sbjct: 7 AITIYPVANYNFGSKAAKTEKDTNVQARLSRWEEKYKKEGVRRSVDAVLLVWEHNHPHVL 66
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G +F KLPGGRL+PGE+E GL+RKL + L + +L W IG+C+A +WRPNF+
Sbjct: 67 LLQLGTSFFKLPGGRLRPGEDEKMGLRRKLENNLSPEAASLAHPWDIGQCIATYWRPNFD 126
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+YPY P HIT+PKE KKL+L+ L E+ Y AVP+N KL+AVPLFELY+N
Sbjct: 127 MTLYPYLPAHITRPKEVKKLYLISLPEKCYLAVPRNAKLIAVPLFELYENT 177
>gi|91093207|ref|XP_969509.1| PREDICTED: similar to CG3689 CG3689-PC [Tribolium castaneum]
Length = 228
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 128/183 (69%), Gaps = 5/183 (2%)
Query: 46 VTSP----VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ 101
VTSP ++N YPL++Y FGTKEP EKD SV R RM+ + + GMR SVE +LLV
Sbjct: 30 VTSPAINRIINLYPLTNYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVH 89
Query: 102 EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA 161
EH PH+LLLQ+G TF KLPGG L PGE+E+EGLKR LT LG + DW + + +
Sbjct: 90 EHGLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRLD-GVKQDWLVEDIIG 148
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
WWRPNFE YPY PPHITKPKE K+LFLV L E+ FAVPKN KL+A PLFELYDN Q
Sbjct: 149 NWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFELYDNSQ 208
Query: 222 IWA 224
+
Sbjct: 209 GYG 211
>gi|331223749|ref|XP_003324547.1| autocrine motility factor receptor [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309303537|gb|EFP80128.1| autocrine motility factor receptor [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 205
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 130/184 (70%), Gaps = 9/184 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V YPLS+YTF TKE + E+D SV RL R++ NY GMR +VE IL+V EH HPH+L
Sbjct: 4 TVTLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHPHVL 63
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL---------GANSPALVPDWQIGECV 160
+LQI N F KLPG L+PGE+++EGLK +L +L G S DW+IG+C+
Sbjct: 64 MLQIANAFFKLPGDYLRPGEDDVEGLKERLDDRLAPPAGQFGAGLTSAQGQKDWEIGDCL 123
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+ WWRPN+E+ MYPY P HITKPKECK L+LV L E++ +VPKN+KLLA+PLFELYDN
Sbjct: 124 SQWWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELYDNP 183
Query: 221 QIWA 224
Q +
Sbjct: 184 QRYG 187
>gi|328861857|gb|EGG10959.1| hypothetical protein MELLADRAFT_59931 [Melampsora larici-populina
98AG31]
Length = 205
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 130/184 (70%), Gaps = 9/184 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V YPLS+YTF TKE + E+D SV RL R++ NY GMR +VE IL+V EH HPH+L
Sbjct: 4 TVTLYPLSNYTFSTKEAQPEEDPSVTSRLQRLQNNYEDFGMRRTVEGILVVHEHGHPHVL 63
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL---------GANSPALVPDWQIGECV 160
+LQI N F KLPG L+PGE++IEGLK +L +L G S DW+IG+C+
Sbjct: 64 MLQIANAFFKLPGDYLRPGEDDIEGLKERLDERLAPPPGQFGAGLTSAQGQKDWEIGDCL 123
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+ WWRPN+E+ MYPY P HITKPKECK L+LV L E++ +VPKN+KLLA+PLFELYDN
Sbjct: 124 SQWWRPNYESFMYPYVPAHITKPKECKMLYLVQLPEKKVLSVPKNMKLLAIPLFELYDNP 183
Query: 221 QIWA 224
Q +
Sbjct: 184 QRYG 187
>gi|157105268|ref|XP_001648792.1| pre-mrna cleavage factor im, 25kD subunit [Aedes aegypti]
gi|157118316|ref|XP_001653167.1| pre-mrna cleavage factor im, 25kD subunit [Aedes aegypti]
gi|108880136|gb|EAT44361.1| AAEL004266-PA [Aedes aegypti]
gi|108883290|gb|EAT47515.1| AAEL001371-PA [Aedes aegypti]
Length = 230
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 40 EKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 99
+ M + +N YPL++YTFGTKEP EKD SV R RM+ + K GMR SVE +LL
Sbjct: 29 QGNQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLL 88
Query: 100 VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGEC 159
V EH PH+LLLQ+G TF KLPGG L GE+E+EGLKR LT LG + DW + +
Sbjct: 89 VHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVEGLKRLLTETLGRQD-GVKQDWIVEDT 147
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+ WWRPNFE YPY PPHITKPKE K+LFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 148 IGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDN 207
Query: 220 VQIWA 224
Q +
Sbjct: 208 SQGYG 212
>gi|328771011|gb|EGF81052.1| hypothetical protein BATDEDRAFT_88168 [Batrachochytrium
dendrobatidis JAM81]
Length = 202
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 139/192 (72%), Gaps = 7/192 (3%)
Query: 45 MVTS--PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE 102
M TS P V+ YPLS ++FG K+P+ME D +++ +L R++ + +GMRTSVE +LLV E
Sbjct: 1 MATSQQPTVSLYPLSGFSFGAKDPQMEDDQTMSAKLNRLQSEFEIQGMRTSVEGVLLVHE 60
Query: 103 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG--ANSPALVPDWQIGECV 160
H HPHIL+LQ+ N++ LPGG LKPGE+EIEGLK ++ KL + D+ +GE +
Sbjct: 61 HGHPHILMLQVANSYYSLPGGILKPGEDEIEGLKLRINQKLAPIGHDQTSESDFDVGELI 120
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+WWRP+ E+IMYPY P HI++PKE +K++L+HL E++ +VPKN+KLLAVPLFELYDN
Sbjct: 121 GVWWRPSIESIMYPYVPAHISRPKEMRKVYLIHLPEKKLLSVPKNMKLLAVPLFELYDNA 180
Query: 221 QIWASYFNHSST 232
A Y H +T
Sbjct: 181 ---ARYGPHLTT 189
>gi|114051528|ref|NP_001040354.1| cleavage and polyadenylation specific factor 5 [Bombyx mori]
gi|95102614|gb|ABF51245.1| cleavage and polyadenylation specific factor 5 [Bombyx mori]
Length = 227
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 126/184 (68%), Gaps = 1/184 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPL++YTFGTKEP EKD SV R RM+ + K GMR SVE +LLV EH PH+LL
Sbjct: 37 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 96
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G F KLPGG L PGE+EI+GLKR LT LG + +W I + + WWRPNFE
Sbjct: 97 LQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLGRQD-GVKQEWLIEDTIGNWWRPNFEP 155
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYFNHS 230
YPY PPHITKPKE K+LFLV L +R FAVPKN KL+A PLFELYDN Q + +
Sbjct: 156 PQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGPIISSL 215
Query: 231 STAF 234
S +
Sbjct: 216 SQSL 219
>gi|109128665|ref|XP_001096261.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Macaca mulatta]
Length = 228
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/167 (62%), Positives = 123/167 (73%), Gaps = 1/167 (0%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+LLLQ+
Sbjct: 41 YPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQL 100
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE Y
Sbjct: 101 GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEPPQY 159
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
PY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 160 PYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 206
>gi|297799004|ref|XP_002867386.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
gi|297313222|gb|EFH43645.1| hypothetical protein ARALYDRAFT_491776 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 140/205 (68%), Gaps = 3/205 (1%)
Query: 20 GEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLA 79
GE+ R +D + E + + +V +V YPLSSY F +++ KD ++DR+
Sbjct: 2 GEEARALD---MEETSEENTTRRNHVVHDLMVELYPLSSYYFSSRDALRVKDEIISDRVI 58
Query: 80 RMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL 139
R+K NY G+RT VEA+LLV+ HPH+LLLQ N+ KLPGGRL+PGE++IEG+KRKL
Sbjct: 59 RLKSNYAAHGLRTCVEAVLLVELLKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGVKRKL 118
Query: 140 TSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREY 199
SKL N +VP ++GEC+ +WWRPNFET+MYP+ PP++ PKEC KLFLV L +
Sbjct: 119 ASKLSVNENVVVPGLEVGECIGMWWRPNFETLMYPFLPPNVKHPKECTKLFLVRLPVNQQ 178
Query: 200 FAVPKNLKLLAVPLFELYDNVQIWA 224
F VPKN KLLAVPL +L++N + +
Sbjct: 179 FVVPKNFKLLAVPLCQLHENEKTYG 203
>gi|307179524|gb|EFN67838.1| Cleavage and polyadenylation specificity factor subunit 5
[Camponotus floridanus]
Length = 222
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
Query: 42 ESKMVTSP------VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE 95
E K+V +P VN YPL++YTFGTKEP EKD SV R RM+ + K GMR SVE
Sbjct: 23 EGKVVQNPSVTINRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVE 82
Query: 96 AILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQ 155
+LLV EH PH+LLLQ+G TF KLPGG L GE+E+EGLKR LT G + +W
Sbjct: 83 GVLLVHEHGLPHVLLLQLGTTFFKLPGGELNTGEDEVEGLKRLLTETFGRQD-GVKQEWV 141
Query: 156 IGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFE 215
I + + WWRPNFE YPY PPHITKPKE K+LFLV L E+ FAVPKN KL+A PLFE
Sbjct: 142 IEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQLQEKALFAVPKNYKLVAAPLFE 201
Query: 216 LYDNVQIWA 224
LYDN Q +
Sbjct: 202 LYDNSQGYG 210
>gi|242019781|ref|XP_002430337.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
gi|212515461|gb|EEB17599.1| Cleavage and polyadenylation specificity factor, putative
[Pediculus humanus corporis]
Length = 235
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 125/175 (71%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFG+KEP EKD SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 44 TVNLYPLTNYTFGSKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLLVHEHGLPHVL 103
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L+PGE+E+EGL+R LT LG + +W I + + WWRPNFE
Sbjct: 104 LLQLGTTFFKLPGGELRPGEDEVEGLRRLLTETLGRQD-GVKQEWVIEDTIGNWWRPNFE 162
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPH+TKPKE K+LFLV L+E+ FAVPKN KL+A PLFELYDN +
Sbjct: 163 PPQYPYIPPHVTKPKEHKRLFLVQLAEKALFAVPKNYKLVAAPLFELYDNAHGYG 217
>gi|118778290|ref|XP_308558.3| AGAP007242-PA [Anopheles gambiae str. PEST]
gi|116132312|gb|EAA04203.3| AGAP007242-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/185 (56%), Positives = 126/185 (68%), Gaps = 1/185 (0%)
Query: 40 EKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 99
+ M + +N YPL++YTFGTKEP EKD SV R RM+ + K GMR SVE +LL
Sbjct: 30 QTNQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLL 89
Query: 100 VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGEC 159
V EH PH+LLLQ+G TF KLPGG L GE+E++GLKR LT LG + DW + +
Sbjct: 90 VHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVDGLKRLLTETLGRQD-GVKQDWIVEDT 148
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+ WWRPNFE YPY PPHITKPKE K+LFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 149 IGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDN 208
Query: 220 VQIWA 224
Q +
Sbjct: 209 SQGYG 213
>gi|225714416|gb|ACO13054.1| Cleavage and polyadenylation specificity factor subunit 5
[Lepeophtheirus salmonis]
Length = 223
Score = 216 bits (551), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
VN +PL++YTFGTK+P EKD SV R RM+ ++ K GMR SVE +LLV EH PH+LL
Sbjct: 32 VNLFPLTNYTFGTKDPLFEKDPSVPARFQRMRDDFEKMGMRRSVEGVLLVHEHGLPHVLL 91
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD-WQIGECVAIWWRPNFE 169
LQ+G TF KLPGG LK GE+E++GLKR +T LG A PD W I + + WWRPNFE
Sbjct: 92 LQLGTTFFKLPGGELKLGEDEVQGLKRIMTDTLGRPE-AKDPDTWIIEDTIGNWWRPNFE 150
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE +KLFLV L ER YFAVP+N KL+A PLFEL+DN Q +
Sbjct: 151 PPQYPYIPPHITKPKEHRKLFLVQLPERSYFAVPRNYKLVAAPLFELFDNSQGYG 205
>gi|307193774|gb|EFN76452.1| Cleavage and polyadenylation specificity factor subunit 5
[Harpegnathos saltator]
Length = 228
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 11 LTKEQLRFKGEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEK 70
+ Q++ G +R +S F E + + + + VN YPL++YTFGTKEP EK
Sbjct: 3 MATSQVKGSGWPRRASNSSF-----EGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEK 57
Query: 71 DTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGEN 130
D SV R RM+ + K GMR SVE +LLV EH PH+LLLQ+G TF KLPGG L GE+
Sbjct: 58 DPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGED 117
Query: 131 EIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLF 190
E+EGLKR LT G + +W I + + WWRPNFE YPY PPHITKPKE K+LF
Sbjct: 118 EVEGLKRLLTETFGRQD-GVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLF 176
Query: 191 LVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 177 LVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYG 210
>gi|225716952|gb|ACO14322.1| Cleavage and polyadenylation specificity factor subunit 5 [Esox
lucius]
Length = 230
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E++GLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGELSSGEDEVDGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFE 157
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 208
>gi|225709978|gb|ACO10835.1| Cleavage and polyadenylation specificity factor subunit 5 [Caligus
rogercresseyi]
Length = 227
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 125/175 (71%), Gaps = 3/175 (1%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
N YPL++YTFGTK+P EKD SV R RM+ + K GMR SV+ ILLV EH PH+LL
Sbjct: 37 ANLYPLTNYTFGTKDPLFEKDPSVPARFQRMRDEFEKIGMRRSVDGILLVHEHGLPHVLL 96
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP-DWQIGECVAIWWRPNFE 169
LQ+G TF KLPGG L+PGE+E++GL+R LT LG P VP W I + + WWRPNFE
Sbjct: 97 LQLGTTFFKLPGGELQPGEDEVQGLQRLLTDTLG--RPDSVPTQWIIEDTIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE +KLF V L E+ YFAVP+N KL+A PLFELYDN Q +
Sbjct: 155 PAQYPYIPPHITKPKEHRKLFFVQLPEKSYFAVPRNYKLVAAPLFELYDNSQGYG 209
>gi|291394738|ref|XP_002713823.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
Length = 227
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R M+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQCMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGMTFFKLPGGELNPGEDEVEGLKRLMTEILGHQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|332021628|gb|EGI61987.1| Cleavage and polyadenylation specificity factor subunit 5
[Acromyrmex echinatior]
Length = 228
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 11 LTKEQLRFKGEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEK 70
+ Q++ G +R +S F E + + + + VN YPL++YTFGTKEP EK
Sbjct: 3 MATSQVKGSGWPRRASNSSF-----EGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEK 57
Query: 71 DTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGEN 130
D SV R RM+ + K GMR SVE +LLV EH PH+LLLQ+G TF KLPGG L GE+
Sbjct: 58 DPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNTGED 117
Query: 131 EIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLF 190
E+EGLKR LT G + +W I + + WWRPNFE YPY PPHITKPKE K+LF
Sbjct: 118 EVEGLKRLLTETFGRQD-GVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLF 176
Query: 191 LVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 177 LVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYG 210
>gi|221222180|gb|ACM09751.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E++GLKR +T LG + DW I + + WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGELSPGEDEVDGLKRLMTEILGRQD-GVKQDWVIDDSIGNWWRPNFE 157
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 208
>gi|340716896|ref|XP_003396927.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Bombus terrestris]
gi|340716898|ref|XP_003396928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Bombus terrestris]
Length = 228
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 11 LTKEQLRFKGEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEK 70
+ Q++ G +R +S F E + + + + VN YPL++YTFGTKEP EK
Sbjct: 3 MATAQVKGSGWPRRASNSSF-----EGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEK 57
Query: 71 DTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGEN 130
D SV R RM+ + K GMR SVE +LLV EH PH+LLLQ+G TF KLPGG L GE+
Sbjct: 58 DPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGED 117
Query: 131 EIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLF 190
E+EGLKR LT G + +W I + + WWRPNFE YPY PPHITKPKE K+LF
Sbjct: 118 EVEGLKRLLTETFGRQD-GVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLF 176
Query: 191 LVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 177 LVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYG 210
>gi|225718018|gb|ACO14855.1| Cleavage and polyadenylation specificity factor subunit 5 [Caligus
clemensi]
Length = 230
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E++GLKR +T LG + DW I + + WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGELSPGEDEVDGLKRLMTEILGRQD-GVKQDWVIDDSIGNWWRPNFE 157
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 208
>gi|328716665|ref|XP_001944073.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Acyrthosiphon pisum]
Length = 232
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPLS+Y FGTKEP EKD SV R RM+ + K GMR SVE +L+V +H PH+LL
Sbjct: 42 INLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLL 101
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L P E+E+EGLKR LT LG + P+W + + + WWRPNFE
Sbjct: 102 LQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLGRQD-GVQPEWTVEDTIGNWWRPNFEP 160
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
YPY PPHITKPKE K+LFLV L ++ FAVPKN KL+A PLFEL+DN Q + S
Sbjct: 161 PTYPYIPPHITKPKEHKRLFLVQLPDKALFAVPKNYKLVAAPLFELFDNAQGYGS 215
>gi|66499810|ref|XP_624522.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Apis mellifera]
gi|350396581|ref|XP_003484601.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Bombus impatiens]
gi|380019194|ref|XP_003693499.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Apis florea]
gi|383853072|ref|XP_003702048.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Megachile rotundata]
Length = 228
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 137/214 (64%), Gaps = 6/214 (2%)
Query: 11 LTKEQLRFKGEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEK 70
+ Q++ G +R +S F E + + + + VN YPL++YTFGTKEP EK
Sbjct: 3 MATTQVKGSGWPRRASNSSF-----EGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEK 57
Query: 71 DTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGEN 130
D SV R RM+ + K GMR SVE +LLV EH PH+LLLQ+G TF KLPGG L GE+
Sbjct: 58 DPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGED 117
Query: 131 EIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLF 190
E+EGLKR LT G + +W I + + WWRPNFE YPY PPHITKPKE K+LF
Sbjct: 118 EVEGLKRLLTETFGRQD-GVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLF 176
Query: 191 LVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 177 LVQLQEKALFAVPKNYKLVAAPLFELYDNSQGYG 210
>gi|171686284|ref|XP_001908083.1| hypothetical protein [Podospora anserina S mat+]
gi|170943103|emb|CAP68756.1| unnamed protein product [Podospora anserina S mat+]
Length = 276
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 128/182 (70%), Gaps = 8/182 (4%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFG KE + E+D SV RL R+ +Y K GMR + E IL+ EHNHPHI
Sbjct: 27 PTIRLYPLSNYTFGVKETQPEEDPSVIARLERLNDHYEKHGMRRTCEGILVCHEHNHPHI 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL------GANSPALVPDWQIGECVAI 162
L+LQI N F KLPG L P ++EIEG KR+L +L G + A DW+IG+C+A
Sbjct: 87 LMLQIANAFFKLPGDYLHPEDDEIEGFKRRLDERLAPVGSLGEGNKAA--DWEIGDCLAQ 144
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQI 222
WWRPN ET MYP+ P HIT+PKECKKL+L+ L E + +VPKN+KLLAVPLFELYDN Q
Sbjct: 145 WWRPNTETFMYPFVPAHITRPKECKKLYLIQLPETKVLSVPKNMKLLAVPLFELYDNTQR 204
Query: 223 WA 224
+
Sbjct: 205 YG 206
>gi|225444838|ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Vitis vinifera]
Length = 284
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 131/175 (74%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V++ YPLS Y FG+K+P + K+ ++ADR+ RMK NY + G RT V A++LV+ HPH+L
Sbjct: 90 VLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLL 149
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+ N+F KLPGGRL+PGE+EI GLKRKL+ KL N DW++GEC+ +WWRP+FE
Sbjct: 150 LLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFE 209
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
T++YPY PP++ PKEC KLFLV L F VPKNLKLLA+PL +L++N + +
Sbjct: 210 TLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYG 264
>gi|324508134|gb|ADY43438.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 229
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 42 ESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ 101
E+ T ++ YPL+SYTFGTKEP+ E+D SV R RM+ Y K GMR SVE +LLV
Sbjct: 29 EANGSTDRAISLYPLTSYTFGTKEPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVH 88
Query: 102 EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA 161
EH+ PH+LLLQIG TF KLPGG L PGE+EI+GLKR LT LG W I + +
Sbjct: 89 EHSLPHVLLLQIGTTFFKLPGGELNPGEDEIDGLKRLLTETLGRQD-GTKDLWTIEDAIG 147
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
WWRPNF+ YPY P H+TKPKE KLFLV L ER FAVPKN KL+A PLFELYDN
Sbjct: 148 NWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDNAA 207
Query: 222 IWA 224
+
Sbjct: 208 GYG 210
>gi|443895157|dbj|GAC72503.1| mRNA cleavage factor I subunit [Pseudozyma antarctica T-34]
Length = 210
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 134/190 (70%), Gaps = 13/190 (6%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + +P++++TF TKE + E+D SVA RL R++ NY GMR +VEA+L+V EH HPH
Sbjct: 2 SQTLTLHPVTAFTFTTKEAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALVP----------DW 154
+L+LQI N F KLPG LKPGE+E+EG+K +L +L ++ + P DW
Sbjct: 62 VLMLQIANAFFKLPGDYLKPGEDEVEGMKARLDERLSPVESDPASFGPNGEGRNKDDGDW 121
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
+I +C+A WWRPNFET MYPY PPH+TKPKECKKLFLV + + AVPKN+KLLAVPLF
Sbjct: 122 EIQDCLAQWWRPNFETFMYPYAPPHVTKPKECKKLFLVTIPPTKVLAVPKNMKLLAVPLF 181
Query: 215 ELYDNVQIWA 224
ELYDN Q +
Sbjct: 182 ELYDNSQRYG 191
>gi|297738624|emb|CBI27869.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 131/175 (74%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V++ YPLS Y FG+K+P + K+ ++ADR+ RMK NY + G RT V A++LV+ HPH+L
Sbjct: 97 VLDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLL 156
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+ N+F KLPGGRL+PGE+EI GLKRKL+ KL N DW++GEC+ +WWRP+FE
Sbjct: 157 LLQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFE 216
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
T++YPY PP++ PKEC KLFLV L F VPKNLKLLA+PL +L++N + +
Sbjct: 217 TLLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYG 271
>gi|198421202|ref|XP_002122804.1| PREDICTED: similar to pre-mrna cleavage factor im, 25kD subunit
[Ciona intestinalis]
Length = 239
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 123/174 (70%), Gaps = 1/174 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPL++YTFGTKEP E+D++V R RM+ + K G R SVE +L+V EH PH+LL
Sbjct: 49 INLYPLTNYTFGTKEPLYERDSTVQARFQRMREEFDKAGQRRSVEGVLIVHEHGLPHVLL 108
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L GENE++GLKR +T LG + DW I +C+ WWRPNFE
Sbjct: 109 LQLGTTFFKLPGGELHNGENEVDGLKRLMTETLGRQD-GVAQDWVIEDCIGNWWRPNFEP 167
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
+YPY P HITKPKE KKLFLV L E+ FAVP+N KL+A PLFELYDN +
Sbjct: 168 PLYPYIPAHITKPKEHKKLFLVQLGEKALFAVPRNYKLVAAPLFELYDNSNGYG 221
>gi|168177225|pdb|3BAP|A Chain A, Crystal Structure Of The 25 Kda Subunit Of Human Cleavage
Factor Im
Length = 227
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R R + + K G R +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRXREEFDKIGXRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLXTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 205
>gi|430812180|emb|CCJ30402.1| unnamed protein product [Pneumocystis jirovecii]
Length = 239
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+Y F TKE + E+D SV RL R+K +Y K GMR + E IL+V EHNHPHIL
Sbjct: 19 TIRIYPLSNYVFSTKEAQPEEDPSVISRLDRLKSHYEKSGMRRTCEGILVVHEHNHPHIL 78
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD--WQIGECVAIWWRPN 167
+LQI N F KLPG L+P E+EI+G +L +L +P D W+IG+C+A WWRPN
Sbjct: 79 MLQIANAFFKLPGDYLQPNESEIQGFVARLNERLAPTTPESPEDTKWEIGDCLAQWWRPN 138
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
FET MYP+ P H+T+PKECKKL+LV L + + AVPKN+KLLAVPLFELYDN
Sbjct: 139 FETFMYPFIPAHVTRPKECKKLYLVKLPKTKVLAVPKNMKLLAVPLFELYDN 190
>gi|209734330|gb|ACI68034.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|223647296|gb|ACN10406.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|223673179|gb|ACN12771.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E++GLKR +T LG + DW I + + WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGELCPGEDEVDGLKRLMTEILGRQD-GVKQDWVIDDSIGNWWRPNFE 157
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 208
>gi|393908210|gb|EFO24259.2| cleavage and polyadenylation specificity factor subunit 5 [Loa loa]
Length = 230
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 140/220 (63%), Gaps = 19/220 (8%)
Query: 41 KESKMVTSPV---------------VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNY 85
+ K+VT+PV +N YPL++YTFGTK+P+ E+D SV R RM+ Y
Sbjct: 14 RPQKIVTTPVTLKKPNDTRSSIDRAINLYPLTNYTFGTKDPQAERDHSVQARFQRMREEY 73
Query: 86 MKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
K GMR SVE +LLV EH+ PH+LLLQIG TF KLPGG L PGE+E+EGLKR LT LG
Sbjct: 74 EKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLTETLGR 133
Query: 146 NSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKN 205
A W I + + WWRPNF+ YPY P H+TKPKE KLFLV L ER FAVPKN
Sbjct: 134 QDGA-KDLWTIEDVIGNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKN 192
Query: 206 LKLLAVPLFELYDNVQIWASYFNHSSTAFQIPVQYDYRLT 245
KL+A PLFELYDN Y N ++ Q+ ++++ T
Sbjct: 193 YKLVAAPLFELYDNS---TGYGNLIASLPQVLSRFNFLYT 229
>gi|453084000|gb|EMF12045.1| pre-mRNA cleavage factor I 25 kDa subunit, partial [Mycosphaerella
populorum SO2202]
Length = 259
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 130/184 (70%), Gaps = 6/184 (3%)
Query: 47 TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 106
+ P + YPLS+YTFGTKE + E+D SV DRL R++ +Y K GMR + E IL+ EHNHP
Sbjct: 24 SQPTLRLYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYEKHGMRRTCEGILVCHEHNHP 83
Query: 107 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECV 160
H+L+LQI N F KLPG L+ +EIEG K +L T LG ++ A DW I + +
Sbjct: 84 HVLMLQIANAFFKLPGDYLRHDVDEIEGFKERLNERLAPTGSLGDSATAADRDWNIADTL 143
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
A W+RPNFET MYP+ PPH+T+PKECKKL+L+ L E + +VPKN+KLLAVPLFELYDN
Sbjct: 144 AQWYRPNFETFMYPFLPPHVTRPKECKKLYLIQLPEGKVLSVPKNMKLLAVPLFELYDNS 203
Query: 221 QIWA 224
Q +
Sbjct: 204 QRYG 207
>gi|388582603|gb|EIM22907.1| cleavage and polyadenylation specificity factor, 25 kDa subunit,
partial [Wallemia sebi CBS 633.66]
Length = 202
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 129/179 (72%), Gaps = 7/179 (3%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S +N YPL +YTF +E + E+D SVA RL R++ NY GMR +VE I++V EH HPH
Sbjct: 1 SNTINIYPLQNYTFTQREAQPEEDASVAARLQRLQNNYEDFGMRRTVEGIMVVHEHGHPH 60
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL-------VPDWQIGECV 160
IL+LQI N F KLPG L PGE + GLK++L +L P + + +W+IG+C+
Sbjct: 61 ILMLQIANAFFKLPGDYLTPGETDEPGLKKRLDDRLAPLDPTMFDPEDGALNEWEIGDCL 120
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
A WWRPNFET MYP+ P H+TKPKECKK+++V L ER+ FAVP+N+KLLA+P+FELYDN
Sbjct: 121 AQWWRPNFETFMYPFIPAHVTKPKECKKMYVVGLPERKVFAVPRNMKLLAIPVFELYDN 179
>gi|170584698|ref|XP_001897131.1| Pre-mrna cleavage factor, identical [Brugia malayi]
gi|24370468|emb|CAC70149.1| putative pre-mrna cleavage factor [Brugia malayi]
gi|158595461|gb|EDP34014.1| Pre-mrna cleavage factor, identical [Brugia malayi]
Length = 230
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 140/220 (63%), Gaps = 19/220 (8%)
Query: 41 KESKMVTSPV---------------VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNY 85
+ K+VT+PV +N YPL++YTFGTK+P+ E+D SV R RM+ Y
Sbjct: 14 RPQKVVTTPVTLKKPNDTRNSIDRAINLYPLTNYTFGTKDPQAERDHSVQARFQRMREEY 73
Query: 86 MKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
K GMR SVE +LLV EH+ PH+LLLQIG TF KLPGG L PGE+E+EGLKR LT LG
Sbjct: 74 EKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLTETLGR 133
Query: 146 NSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKN 205
A W I + + WWRPNF+ YPY P H+TKPKE KLFLV L ER FAVPKN
Sbjct: 134 QDGA-KDLWTIEDVIGNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALFAVPKN 192
Query: 206 LKLLAVPLFELYDNVQIWASYFNHSSTAFQIPVQYDYRLT 245
KL+A PLFELYDN Y N ++ Q+ ++++ T
Sbjct: 193 YKLVAAPLFELYDNS---TGYGNLIASLPQVLSRFNFLYT 229
>gi|116007798|ref|NP_001036597.1| CG3689, isoform C [Drosophila melanogaster]
gi|113194891|gb|ABI31246.1| CG3689, isoform C [Drosophila melanogaster]
Length = 237
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E+EGLKR L+ LG + +W + + + WWRPNFE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQD-GVKQEWIVEDTIGNWWRPNFE 164
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE K+LFLV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQGYG 219
>gi|209734540|gb|ACI68139.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
gi|303666153|gb|ADM16213.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 229
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 128/187 (68%), Gaps = 9/187 (4%)
Query: 42 ESKMVTSP--------VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTS 93
E+K ++ P +N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +
Sbjct: 22 ENKYISPPSKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRA 81
Query: 94 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD 153
VE +L+V EH PH+LLLQ+G TF KLPGG L GE+E+EGLKR +T LG + D
Sbjct: 82 VEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLMTEILGRQD-GVKQD 140
Query: 154 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 213
W I + + WWRPNFE YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PL
Sbjct: 141 WVIDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPL 200
Query: 214 FELYDNV 220
FELYDN
Sbjct: 201 FELYDNA 207
>gi|241730686|ref|XP_002413834.1| mRNA cleavage factor I subunit, putative [Ixodes scapularis]
gi|215507650|gb|EEC17142.1| mRNA cleavage factor I subunit, putative [Ixodes scapularis]
Length = 233
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFGTKE + E+D+SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 42 TVNLYPLTNYTFGTKEAQYERDSSVPARFQRMREEFEKMGMRRSVEGVLLVHEHGLPHVL 101
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E EGLKR +T LG + DW I + V WWRPNFE
Sbjct: 102 LLQLGTTFFKLPGGELNPGEDEAEGLKRLMTEVLGRQD-GVKQDWLIEDTVGNWWRPNFE 160
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHIT PKE K L LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 161 PPQYPYVPPHITAPKEHKMLHLVQLPEKALFAVPKNYKLVAAPLFELYDNAQGYG 215
>gi|391346207|ref|XP_003747370.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Metaseiulus occidentalis]
Length = 233
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFGTKE EKD SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 42 TVNLYPLTNYTFGTKEALYEKDPSVPARFQRMREEFEKIGMRRSVEGVLLVHEHGLPHVL 101
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR ++ LG + +W I + V WWRPNFE
Sbjct: 102 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMSETLGRQD-GVKQEWTIEDTVGNWWRPNFE 160
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PHITKPKE K+LFLV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 161 PAQYPYILPHITKPKEHKRLFLVQLPEKALFAVPKNYKLVAAPLFELYDNSQGYG 215
>gi|221219102|gb|ACM08212.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 230
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 122/171 (71%), Gaps = 1/171 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E++GLKR +T LG + DW I + + WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGELGPGEDEVDGLKRLMTEILGRQD-GVKQDWVIDDSIGNWWRPNFE 157
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A LFELYDN
Sbjct: 158 PPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAASLFELYDNA 208
>gi|427793241|gb|JAA62072.1| Putative mrna cleavage factor i subunit, partial [Rhipicephalus
pulchellus]
Length = 235
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFGTKE E+D+SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 44 TVNLYPLTNYTFGTKEALYERDSSVPARFQRMREEFEKIGMRRSVEGVLLVHEHGLPHVL 103
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E+EGLKR +T LG + DW I + V WWRPNFE
Sbjct: 104 LLQLGTTFFKLPGGELNMGEDEVEGLKRLMTEILGRQD-GVKQDWVIEDTVGNWWRPNFE 162
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE K+L+LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 163 PPQYPYVPPHITKPKEHKRLYLVQLPEKALFAVPKNYKLVAAPLFELYDNAQGYG 217
>gi|340959576|gb|EGS20757.1| hypothetical protein CTHT_0025930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 266
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 128/181 (70%), Gaps = 8/181 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQQYGMRRTCEGVLVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL------GANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P ++EIEG K +L +L G + A DWQIG+C+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPDDDEIEGFKARLDERLAPVGSLGEGNKAG--DWQIGDCLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P HIT+PKECKKL+ + L E + +VPKN+KLLAVPLFELYDN Q +
Sbjct: 146 WRPNFETFMYPFVPAHITRPKECKKLYFIQLPETKVLSVPKNMKLLAVPLFELYDNTQRY 205
Query: 224 A 224
Sbjct: 206 G 206
>gi|363807126|ref|NP_001242595.1| uncharacterized protein LOC100791216 [Glycine max]
gi|255640824|gb|ACU20695.1| unknown [Glycine max]
Length = 216
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 132/185 (71%)
Query: 52 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 111
+ YPLSSY FG+K+ KD ++ DR+ RMK NY G+RT VEA+LLV+ HPH+LLL
Sbjct: 29 DIYPLSSYYFGSKDAVPSKDLTLVDRVLRMKSNYAASGIRTCVEAVLLVELFKHPHLLLL 88
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI 171
QI N+ KLPGGRL+PGE++ +GLKRKL KL N +W++GEC+ +WWRP+FET+
Sbjct: 89 QIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSVNEDGDGSEWEVGECLGMWWRPDFETL 148
Query: 172 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYFNHSS 231
MYP+ PP++ KPKEC K+FLV L E VPKN+++LAVPL ++++N + + + S
Sbjct: 149 MYPFIPPNVEKPKECTKVFLVKLPESRKLIVPKNMRVLAVPLCQVHENHKTYGQIISGSH 208
Query: 232 TAFQI 236
+ QI
Sbjct: 209 SCCQI 213
>gi|346469369|gb|AEO34529.1| hypothetical protein [Amblyomma maculatum]
Length = 240
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/175 (59%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFGTKE E+D+SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 49 TVNLYPLTNYTFGTKEALYERDSSVPARFQRMREEFEKIGMRRSVEGVLLVHEHGLPHVL 108
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E+EGLKR +T LG + DW I + V WWRPNFE
Sbjct: 109 LLQLGTTFFKLPGGELNMGEDEVEGLKRLMTEILGRQD-GVKQDWVIEDTVGNWWRPNFE 167
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE K+L+LV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 168 PPQYPYVPPHITKPKEHKRLYLVQLPEKALFAVPKNYKLVAAPLFELYDNAQGYG 222
>gi|343427607|emb|CBQ71134.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 203
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 133/190 (70%), Gaps = 20/190 (10%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + +P++++TF TKE + E+D SVA RL R++ NY GMR +VEA+L+V EH HPH
Sbjct: 2 SQTLTLHPVTAFTFTTKEAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHRHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALVP----------DW 154
+L+LQI N F KLPG LKPGE+E+EG+K +L +LG ++ + P DW
Sbjct: 62 VLMLQIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDNGDW 121
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
+I +C+A WWRPNFET MYPY PPH+TKPKECKKLFLV AVPKN+KLLAVPLF
Sbjct: 122 EIQDCLAQWWRPNFETFMYPYAPPHVTKPKECKKLFLV-------LAVPKNMKLLAVPLF 174
Query: 215 ELYDNVQIWA 224
ELYDN Q +
Sbjct: 175 ELYDNSQRYG 184
>gi|312074088|ref|XP_003139813.1| pre-mRNA cleavage factor [Loa loa]
Length = 241
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/186 (57%), Positives = 126/186 (67%), Gaps = 3/186 (1%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTK+P+ E+D SV R RM+ Y K GMR SVE +LLV EH+ PH+LLLQI
Sbjct: 41 YPLTNYTFGTKDPQAERDHSVQARFQRMREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQI 100
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
G TF KLPGG L PGE+E+EGLKR LT LG A W I + + WWRPNF+ Y
Sbjct: 101 GTTFFKLPGGELNPGEDEVEGLKRLLTETLGRQDGA-KDLWTIEDVIGNWWRPNFDPPRY 159
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASY--FNHSS 231
PY P H+TKPKE KLFLV L ER FAVPKN KL+A PLFELYDN + S H +
Sbjct: 160 PYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDNSTGYDSISCTRHEA 219
Query: 232 TAFQIP 237
F +P
Sbjct: 220 LGFIVP 225
>gi|255546065|ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
gi|223546548|gb|EEF48046.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis]
Length = 214
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 138/195 (70%), Gaps = 5/195 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V++ YPLS Y FG+K+P +D ++ DR+ RMK NY+ G+RT VEA++LV+ HPH+L
Sbjct: 22 VLDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVELFKHPHLL 81
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQI N+ KLPGGR++PGE++I GLKRKL+ KL N DW++GEC+ +WWRP+FE
Sbjct: 82 LLQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKLSNNQDQT--DWEVGECLGMWWRPDFE 139
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYFNH 229
T++YPY PP++ PKEC KLFLV L F VPKNLKLLAVPL +++DN + +
Sbjct: 140 TLLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGII-- 197
Query: 230 SSTAFQIPVQYDYRL 244
S Q+ +Y +R+
Sbjct: 198 -SGVPQLLSKYSFRI 211
>gi|302915883|ref|XP_003051752.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732691|gb|EEU46039.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE ++E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQLEEDPSVIARLKRLEEHYTEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIWW 164
LQI N F KLPG LKP ++EIEG K +L +LG A DWQ+G+C+A WW
Sbjct: 89 LQIANAFFKLPGDYLKPEDDEIEGFKSRLDERLAPVGRLGEGEEA--GDWQVGDCLAQWW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 147 RPNFETFMYPFVPAHVTRPKECKKLYFIQLPKTKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|432101736|gb|ELK29740.1| Cleavage and polyadenylation specificity factor subunit 5 [Myotis
davidii]
Length = 195
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+LL
Sbjct: 5 INLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLL 64
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 65 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFEP 123
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 124 PQVSVHPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 173
>gi|221220044|gb|ACM08683.1| Cleavage and polyadenylation specificity factor subunit 5 [Salmo
salar]
Length = 229
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 127/187 (67%), Gaps = 9/187 (4%)
Query: 42 ESKMVTSP--------VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTS 93
E+K ++ P +N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +
Sbjct: 22 ENKYISPPSKPLALERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFEKIGMRRA 81
Query: 94 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD 153
VE +L+V EH PH+LLLQ+G TF KLPGG L GE+E+EGLKR +T LG +
Sbjct: 82 VEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLMTEILGRQD-GVKQG 140
Query: 154 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 213
W I + + WWRPNFE YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PL
Sbjct: 141 WVIDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPL 200
Query: 214 FELYDNV 220
FELYDN
Sbjct: 201 FELYDNA 207
>gi|380478491|emb|CCF43569.1| cleavage and polyadenylation specificity factor subunit 5
[Colletotrichum higginsianum]
Length = 270
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 126/182 (69%), Gaps = 10/182 (5%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYSQHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG-------ANSPALVPDWQIGECVAI 162
+LQI N F KLPG L+P ++E+EG K +L +L PA DWQ+G+C+A
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPXGRIGEGEEPA---DWQVGDCLAQ 144
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQI 222
WWRPNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN
Sbjct: 145 WWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTAR 204
Query: 223 WA 224
+
Sbjct: 205 YG 206
>gi|452982522|gb|EME82281.1| hypothetical protein MYCFIDRAFT_40599 [Pseudocercospora fijiensis
CIRAD86]
Length = 274
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/182 (54%), Positives = 128/182 (70%), Gaps = 7/182 (3%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV DRL R++ +Y K GMR + E IL+ EHNHPH+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYEKHGMRRTCEGILVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAI 162
L+LQI N F KLPG L+ +EIEG K +L T LGA S A DW + + +A
Sbjct: 87 LMLQIANAFFKLPGDYLQHDVDEIEGFKARLNERLAPTGSLGA-SEAADSDWDVADTLAQ 145
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQI 222
W+RPNFET MYP+ PPH+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN Q
Sbjct: 146 WYRPNFETFMYPFLPPHVTRPKECKKLYFIRLPKAKVLSVPKNMKLLAVPLFELYDNSQR 205
Query: 223 WA 224
+
Sbjct: 206 YG 207
>gi|310798453|gb|EFQ33346.1| cleavage and polyadenylation specificity factor subunit 5
[Glomerella graminicola M1.001]
Length = 269
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 126/182 (69%), Gaps = 10/182 (5%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYNQHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG-------ANSPALVPDWQIGECVAI 162
+LQI N F KLPG L+P ++E+EG K +L +L PA DWQ+G+C+A
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPVGRIGEGEEPA---DWQVGDCLAQ 144
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQI 222
WWRPNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN
Sbjct: 145 WWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTAR 204
Query: 223 WA 224
+
Sbjct: 205 YG 206
>gi|358058565|dbj|GAA95528.1| hypothetical protein E5Q_02183 [Mixia osmundae IAM 14324]
Length = 197
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 124/173 (71%), Gaps = 5/173 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ +PLS+YTF TK+ + E+D SVA RL R++ Y GMR + E IL+V EH HPH+L
Sbjct: 4 TLTLFPLSNYTFSTKDSQPEEDPSVAARLQRLQNQYEDFGMRRTAEGILVVHEHGHPHVL 63
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALVPDWQIGECVAIWWRP 166
+LQI N F KLPG L+PGE++ EGLKR+L+ +L + P DW+IG+C+A WWRP
Sbjct: 64 MLQIANAFFKLPGDYLRPGEDDAEGLKRRLSERLDPVEGSRPG--EDWEIGDCLAQWWRP 121
Query: 167 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
NFE+ MYPY P H+TKPKECK +LV + R+ VPKN KLLA+PLFELYDN
Sbjct: 122 NFESFMYPYIPAHVTKPKECKSFYLVQMPPRKVLCVPKNFKLLAIPLFELYDN 174
>gi|345479668|ref|XP_003424005.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Nasonia vitripennis]
Length = 225
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++Y FGTKEP EKD SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 34 TINLYPLTNYKFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVL 93
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
+LQ+G TF KLPGG L GE+E+EGLKR LT LG + +W I + + WWRPNFE
Sbjct: 94 MLQLGTTFFKLPGGELNAGEDEVEGLKRLLTEILGRQD-GVKQEWLIEDTIGNWWRPNFE 152
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE K+LFLV L E+ AVPKN KL+A PLFELYDN Q +
Sbjct: 153 PPQYPYIPPHITKPKEHKRLFLVQLQEKAVVAVPKNYKLVAAPLFELYDNSQGYG 207
>gi|429863433|gb|ELA37884.1| cleavage and polyadenylation specific factor 5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 267
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 126/182 (69%), Gaps = 10/182 (5%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYNQHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG-------ANSPALVPDWQIGECVAI 162
+LQI N F KLPG L+P ++E+EG K +L +L PA DWQ+G+C+A
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEVEGFKSRLDERLAPVGRIGEGEEPA---DWQVGDCLAQ 144
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQI 222
WWRPNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN
Sbjct: 145 WWRPNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTAR 204
Query: 223 WA 224
+
Sbjct: 205 YG 206
>gi|156545052|ref|XP_001600794.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 1 [Nasonia vitripennis]
Length = 214
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 126/196 (64%), Gaps = 9/196 (4%)
Query: 37 REREKESKMVTSP--------VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKE 88
RER M +S + YPL++Y FGTKEP EKD SV R RM+ + K
Sbjct: 2 RERASPQDMASSSGSTVTGGKTITIYPLTNYKFGTKEPLFEKDPSVPARFQRMRDEFDKI 61
Query: 89 GMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP 148
GMR SVE +LLV EH PH+L+LQ+G TF KLPGG L GE+E+EGLKR LT LG
Sbjct: 62 GMRRSVEGVLLVHEHGLPHVLMLQLGTTFFKLPGGELNAGEDEVEGLKRLLTEILGRQD- 120
Query: 149 ALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKL 208
+ +W I + + WWRPNFE YPY PPHITKPKE K+LFLV L E+ AVPKN KL
Sbjct: 121 GVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQEKAVVAVPKNYKL 180
Query: 209 LAVPLFELYDNVQIWA 224
+A PLFELYDN Q +
Sbjct: 181 VAAPLFELYDNSQGYG 196
>gi|388856433|emb|CCF49982.1| uncharacterized protein [Ustilago hordei]
Length = 203
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 132/190 (69%), Gaps = 20/190 (10%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + +P++S+TF TK+ + E+D SVA RL R++ NY GMR +VEA+L+V EH HPH
Sbjct: 2 SQTLTLHPVTSFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALVPD----------W 154
+L+LQI N F KLPG LKPGE+E+EG+K +L +LG ++ + P+ W
Sbjct: 62 VLMLQIANAFFKLPGDYLKPGEDEVEGMKARLDERLGPVESDPNSFGPNGEGRNKDDGEW 121
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
+I +C+A WWRPNFET MYPY PPHITKPKECKKLF V AVPKN+KLLAVPLF
Sbjct: 122 EIQDCLAQWWRPNFETFMYPYAPPHITKPKECKKLFQV-------LAVPKNMKLLAVPLF 174
Query: 215 ELYDNVQIWA 224
ELYDN Q +
Sbjct: 175 ELYDNSQRYG 184
>gi|367049622|ref|XP_003655190.1| hypothetical protein THITE_2118582 [Thielavia terrestris NRRL 8126]
gi|347002454|gb|AEO68854.1| hypothetical protein THITE_2118582 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 126/181 (69%), Gaps = 8/181 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL------GANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P + EIEG K +L +L G + A DWQ+G+C+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPEDEEIEGFKARLDERLAPVGSLGEGNKAG--DWQVGDCLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P HIT+PKECKKL+ + L E + +VPKN+KLLAVPLFELY+N Q +
Sbjct: 146 WRPNFETFMYPFVPAHITRPKECKKLYFIQLPETKVLSVPKNMKLLAVPLFELYENTQRY 205
Query: 224 A 224
Sbjct: 206 G 206
>gi|449298073|gb|EMC94090.1| hypothetical protein BAUCODRAFT_567664 [Baudoinia compniacensis
UAMH 10762]
Length = 262
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 129/183 (70%), Gaps = 10/183 (5%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
+P V YPLS+YTFGTKE + E+D SV +RL R++ +Y + GMR + EA+L+ EHNHPH
Sbjct: 26 APAVRLYPLSNYTFGTKEGQPEEDPSVKERLRRLEEHYEQHGMRRTCEAVLVCHEHNHPH 85
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA---------NSPALVPDWQIGE 158
+L+LQI N F KLPG + +EIEG K +L +L ++PA DW + +
Sbjct: 86 VLMLQIANAFFKLPGDYIPHSSDEIEGFKARLNERLAPPPTSSLSTRDTPAEA-DWNVTD 144
Query: 159 CVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYD 218
+A+WWRPNFET MYPY P H+T+PKECKKL+L+ L + + +VPKN+KLLAVPLFELYD
Sbjct: 145 TLAVWWRPNFETFMYPYLPAHVTRPKECKKLYLIQLPKSKVLSVPKNMKLLAVPLFELYD 204
Query: 219 NVQ 221
N Q
Sbjct: 205 NTQ 207
>gi|367027876|ref|XP_003663222.1| hypothetical protein MYCTH_2304865 [Myceliophthora thermophila ATCC
42464]
gi|347010491|gb|AEO57977.1| hypothetical protein MYCTH_2304865 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 127/181 (70%), Gaps = 8/181 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL------GANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P ++EIEG K +L +L G + A DWQ+G+C+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEIEGFKARLDERLAPVGSLGEGNKA--GDWQVGDCLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P HIT+PKECKKL+ + L + + +VPKN+KLLAVPLFELY+N Q +
Sbjct: 146 WRPNFETFMYPFVPAHITRPKECKKLYFIQLPQTKVLSVPKNMKLLAVPLFELYENTQRY 205
Query: 224 A 224
Sbjct: 206 G 206
>gi|46125059|ref|XP_387083.1| hypothetical protein FG06907.1 [Gibberella zeae PH-1]
gi|408388256|gb|EKJ67942.1| hypothetical protein FPSE_11753 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYTEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIWW 164
LQI N F KLPG L+P ++EI+G K +L +LG A DWQ+G+C+A WW
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEIQGFKSRLDERLAPVGRLGEGEEA--GDWQVGDCLAQWW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 147 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|384491888|gb|EIE83084.1| hypothetical protein RO3G_07789 [Rhizopus delemar RA 99-880]
Length = 199
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P YPL +YT TKE + E+DTSVA RL R++ +Y + GMR SVEA+L+V +HNHPH+
Sbjct: 2 PKATLYPLENYTLSTKEAQPEEDTSVAARLRRLEADYNQHGMRRSVEAVLVVHQHNHPHV 61
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP---ALVPDWQIGECVAIWWR 165
L+ QI N+F KLPG L+P +E EG+K L KLG P DW IGEC++ WWR
Sbjct: 62 LMFQIANSFFKLPGHYLEPEVDEAEGMKEILNKKLGPEDPLEWDSQNDWTIGECLSTWWR 121
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
PN+E MYPY P H+T PKE K L++VHL + +VPKN+KLLAVPLFELYDN A
Sbjct: 122 PNYENYMYPYVPAHVTSPKEKKSLYIVHLPPNKVLSVPKNMKLLAVPLFELYDNS---AR 178
Query: 226 YFNHSSTAFQIPVQYDY 242
Y ST + +Y++
Sbjct: 179 YGAQLSTIAHLLSRYEF 195
>gi|342879665|gb|EGU80905.1| hypothetical protein FOXB_08569 [Fusarium oxysporum Fo5176]
Length = 264
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 127/180 (70%), Gaps = 8/180 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHYTEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIWW 164
LQI N F KLPG L+P ++EI+G K +L +LG A DWQ+G+C+A WW
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEIQGFKSRLDERLAPVGRLGEGEEAG--DWQVGDCLAQWW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 147 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPKQKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|405975730|gb|EKC40278.1| Cleavage and polyadenylation specificity factor subunit 5
[Crassostrea gigas]
Length = 220
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPL++YTFGTKEP EKD+SV R RM+ + K GMR SVE +L+V EH PH+LL
Sbjct: 36 INLYPLTNYTFGTKEPLYEKDSSVPARFQRMRDEFEKIGMRRSVEGVLIVHEHGLPHVLL 95
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L GE+++EGLKR LT LG + +W + + + WWRPNFE
Sbjct: 96 LQLGTTFFKLPGGELNSGEDQVEGLKRLLTETLGRQDGGTM-EWVVEDTIGNWWRPNFEP 154
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
YPY P HITKPKE K+LFLV L E+ FAVP+N KL+A PLFELYDN
Sbjct: 155 PQYPYIPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELYDN 203
>gi|116207818|ref|XP_001229718.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183799|gb|EAQ91267.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 126/181 (69%), Gaps = 8/181 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYQAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL------GANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P ++E+EG K +L +L G + A DWQ+G+C+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGSLGEGNKAA--DWQVGDCLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P HIT+PKECKKL+ + L + +VPKN+KLLAVPLFELY+N Q +
Sbjct: 146 WRPNFETFMYPFVPAHITRPKECKKLYFIQLPHSKVLSVPKNMKLLAVPLFELYENTQRY 205
Query: 224 A 224
Sbjct: 206 G 206
>gi|336268364|ref|XP_003348947.1| hypothetical protein SMAC_01968 [Sordaria macrospora k-hell]
gi|380094207|emb|CCC08424.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 264
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 124/178 (69%), Gaps = 4/178 (2%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL+
Sbjct: 29 IRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYSAHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWRP 166
LQI N F KLPG L+P ++EIEG K++L +L DWQ+G+C+A WWRP
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDWQVGDCLAQWWRP 148
Query: 167 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
NFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 149 NFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|336470088|gb|EGO58250.1| hypothetical protein NEUTE1DRAFT_82635 [Neurospora tetrasperma FGSC
2508]
gi|350290220|gb|EGZ71434.1| cleavage and polyadenylation specificity factor, 25 kDa subunit
[Neurospora tetrasperma FGSC 2509]
Length = 264
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWR 165
+LQI N F KLPG L+P ++EIEG K++L +L DWQ+G+C+A WWR
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDWQVGDCLAQWWR 147
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 PNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|85089870|ref|XP_958148.1| hypothetical protein NCU09014 [Neurospora crassa OR74A]
gi|28919478|gb|EAA28912.1| hypothetical protein NCU09014 [Neurospora crassa OR74A]
Length = 264
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWR 165
+LQI N F KLPG L+P ++EIEG K++L +L DWQ+G+C+A WWR
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEIEGFKQRLDERLAPVGSLGEGEKAGDWQVGDCLAQWWR 147
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 PNFETFMYPFVPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|334362315|gb|AEG78357.1| cleavage and polyadenylation specific factor 5-like protein
[Epinephelus coioides]
Length = 182
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/161 (62%), Positives = 116/161 (72%), Gaps = 1/161 (0%)
Query: 60 TFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCK 119
TFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+LLLQ+G TF K
Sbjct: 1 TFGTKEPLYEKDSSVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFK 60
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPH 179
LPGG L PGE+E+EGLKR +T LG + DW I +C+ WWRPNFE YPY P H
Sbjct: 61 LPGGELSPGEDEVEGLKRLMTEILGRQD-GVKQDWVIDDCIGNWWRPNFEPPQYPYIPAH 119
Query: 180 ITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
ITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 120 ITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 160
>gi|452841703|gb|EME43640.1| hypothetical protein DOTSEDRAFT_54398 [Dothistroma septosporum
NZE10]
Length = 270
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 126/179 (70%), Gaps = 3/179 (1%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P V YPLS+YTFGTKE + E+D SV DRL R++ Y K GMR S EAIL+ EHNHPH+
Sbjct: 27 PAVRLYPLSNYTFGTKETQPEEDASVKDRLKRLEEYYEKHGMRRSCEAILVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL---GANSPALVPDWQIGECVAIWWR 165
L+LQI N F KLPG + +E+EG K +L +L G+ + DW + + +A W+R
Sbjct: 87 LMLQIANAFFKLPGDYIPHDVDEVEGFKDRLNERLAPTGSLAEKDDRDWNVFDTIAQWYR 146
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PNFET MYP+ PPH+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN Q +
Sbjct: 147 PNFETFMYPFLPPHVTRPKECKKLYFIQLPKEKVLSVPKNMKLLAVPLFELYDNSQRYG 205
>gi|320586679|gb|EFW99349.1| cleavage and polyadenylation specific factor 5 [Grosmannia
clavigera kw1407]
Length = 265
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 124/181 (68%), Gaps = 8/181 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIKLYPLSNYTFGVKETQPEEDPSVVARLRRLEEHYTVHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P + E+EG K +L +LG A DWQ+GEC+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPEDEEVEGFKSRLDERLAPVGRLGEGEEA--GDWQVGECLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 146 WRPNFETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARY 205
Query: 224 A 224
Sbjct: 206 G 206
>gi|289741289|gb|ADD19392.1| mRNA cleavage factor I subunit [Glossina morsitans morsitans]
Length = 232
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPL+ YTFG KEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 41 TIKLYPLTDYTFGCKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 100
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+ +EGLKR LT LG + +W + + + WWRPNFE
Sbjct: 101 LLQLGTTFFKLPGGELNAGEDGVEGLKRLLTETLGRQD-GIKQEWVVEDIIGNWWRPNFE 159
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY PPHITKPKE K+LFLV L E+ FAVPKN KL+A PLFELYDN Q +
Sbjct: 160 PPQYPYIPPHITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQGYG 214
>gi|440636758|gb|ELR06677.1| hypothetical protein GMDG_00294 [Geomyces destructans 20631-21]
Length = 269
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 125/178 (70%), Gaps = 5/178 (2%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YPLS+YTFGTKE + E+D SV RL R++ +Y GMR + E IL+ EHNHPH
Sbjct: 26 SETIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYELHGMRRTCEGILVCHEHNHPH 85
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAI 162
IL+LQI N F KLPG LKP ++EIEG K +L +L + + DW+IG+ +A
Sbjct: 86 ILMLQIANAFFKLPGDYLKPEDDEIEGFKARLNERLAPVGSQFSGEGVNEDWEIGDTLAQ 145
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
WWRPNFET MYP+ P H+T+PKECKKL+ + L ++ +VPKN+KLLAVPLFELYDN
Sbjct: 146 WWRPNFETFMYPFIPAHVTRPKECKKLYFIQLPRQKVLSVPKNMKLLAVPLFELYDNT 203
>gi|72008807|ref|XP_784907.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Strongylocentrotus purpuratus]
Length = 227
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 98/166 (59%), Positives = 121/166 (72%), Gaps = 1/166 (0%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEP EKD+SV R RMK + K G R SVE +L+V EH+ PH+LLLQ+
Sbjct: 40 YPLTNYTFGTKEPLYEKDSSVPARFQRMKDEFQKMGTRRSVEGVLIVHEHDLPHVLLLQL 99
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
G TF KLPGG LK GE+E++GLKR +T LG + DW + + +A W+RPNFE Y
Sbjct: 100 GTTFFKLPGGELKAGEDEMDGLKRLMTEILGRQD-GVQQDWMVEDIIANWYRPNFEPPQY 158
Query: 174 PYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
PY P HITKPKE KKL+ V L+E+ FAVP+N KL+A PLFELYDN
Sbjct: 159 PYIPAHITKPKEHKKLYFVQLAEKALFAVPRNYKLVAAPLFELYDN 204
>gi|291226047|ref|XP_002733010.1| PREDICTED: cleavage and polyadenylation specific factor 5-like
[Saccoglossus kowalevskii]
Length = 226
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Query: 36 EREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE 95
+R S M ++ YPL++YTFGTK+P EKD SVA R RM+ + K G R +VE
Sbjct: 21 QRYATAGSTMNAERAISLYPLTNYTFGTKDPLYEKDASVAARFQRMREEFDKMGTRRTVE 80
Query: 96 AILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQ 155
+L+V EH PH+LLLQ+G TF KLPGG L PGE+E++GLKR LT LG + DW
Sbjct: 81 GVLIVHEHGLPHVLLLQLGTTFFKLPGGELAPGEDEVDGLKRLLTEILGRQD-GIQQDWM 139
Query: 156 IGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFE 215
+ + W+RPNFE YPY P HITKPKE K+L+LV L E+ FAVP+N KL+A PLFE
Sbjct: 140 TEDVIGNWYRPNFEPPQYPYVPAHITKPKEHKRLYLVQLGEKALFAVPRNYKLVAAPLFE 199
Query: 216 LYDNV 220
LYDN
Sbjct: 200 LYDNA 204
>gi|389634023|ref|XP_003714664.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae 70-15]
gi|351646997|gb|EHA54857.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae 70-15]
gi|440474813|gb|ELQ43535.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae Y34]
gi|440487297|gb|ELQ67094.1| cleavage and polyadenylation specificity factor subunit 5
[Magnaporthe oryzae P131]
Length = 266
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 123/176 (69%), Gaps = 8/176 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYNAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P ++E+EG K +L +LG A DWQIG+C+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEA--GDWQIGDCLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
WRPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN
Sbjct: 146 WRPNFETFMYPFVPAHVTRPKECKKLYFIQLPNSKVLSVPKNMKLLAVPLFELYDN 201
>gi|402087049|gb|EJT81947.1| cleavage and polyadenylation specificity factor subunit 5
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 266
Score = 206 bits (525), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 123/176 (69%), Gaps = 8/176 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYSAHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIW 163
+LQI N F KLPG L+P ++E+EG K +L +LG A DWQ+G+C+A W
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEA--GDWQVGDCLAQW 145
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
WRPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN
Sbjct: 146 WRPNFETFMYPFVPAHVTRPKECKKLYFIQLPNSKVLSVPKNMKLLAVPLFELYDN 201
>gi|398393918|ref|XP_003850418.1| hypothetical protein MYCGRDRAFT_74666 [Zymoseptoria tritici IPO323]
gi|339470296|gb|EGP85394.1| hypothetical protein MYCGRDRAFT_74666 [Zymoseptoria tritici IPO323]
Length = 274
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 123/181 (67%), Gaps = 5/181 (2%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV DRL R++ +Y K GMR + E IL+ EHNHPHI
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVKDRLRRLEEHYDKHGMRRTCEGILVCHEHNHPHI 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP-----ALVPDWQIGECVAIW 163
L+LQI N F KLPG L +EIEG K +L +L A DW + + +A W
Sbjct: 87 LMLQIANAFFKLPGDYLPHDVDEIEGFKTRLNERLAPTGSLSTVEAADSDWDVADTLAQW 146
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
+RPNFET MYP+ PPH+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN Q +
Sbjct: 147 YRPNFETFMYPFLPPHVTRPKECKKLYFIQLPRAKVLSVPKNMKLLAVPLFELYDNTQRY 206
Query: 224 A 224
Sbjct: 207 G 207
>gi|358399562|gb|EHK48899.1| hypothetical protein TRIATDRAFT_129286 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 125/180 (69%), Gaps = 8/180 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ ++ + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIWW 164
LQI N F KLPG LKP ++E+EG K +L +LG A DW++GEC+A WW
Sbjct: 89 LQIANAFFKLPGDYLKPEDDEVEGFKARLDERLAPVGRLGEGEEAG--DWEVGECLAQWW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKK + + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 147 RPNFETFMYPFVPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|156048430|ref|XP_001590182.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154693343|gb|EDN93081.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 271
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 128/180 (71%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y++ GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYVEHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG LKP ++E+EG K++L +L + + +W+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQFSGEGVNEEWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L ++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|291388431|ref|XP_002710785.1| PREDICTED: nudix (nucleoside diphosphate linked moiety X)-type
motif 21-like [Oryctolagus cuniculus]
Length = 227
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 31 LNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGM 90
+N+ + ++ + +N YPL++YTFGTKEP EKD+SVA R RM+ + K GM
Sbjct: 17 VNQFGNKYMQRTKPLTLQRTINLYPLTNYTFGTKEPLYEKDSSVAARFLRMQEEFDKIGM 76
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL 150
R +VE +L+V EH PH+LLLQ+G TF KLPGG L PGE+E EGLK +T LG +
Sbjct: 77 RRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEGEGLKHLMTEILGRQD-GV 135
Query: 151 VPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLA 210
+ DW I +C+ WRPNFE YPY P HI KPK KKLFLV L E+ FAVPKN KL+A
Sbjct: 136 LQDWVIDDCIGNCWRPNFEPPQYPYIPAHIAKPKAHKKLFLVQLQEKALFAVPKNYKLVA 195
Query: 211 VPLFELYDNV 220
PL ELYDN
Sbjct: 196 APLIELYDNA 205
>gi|156401665|ref|XP_001639411.1| predicted protein [Nematostella vectensis]
gi|156226539|gb|EDO47348.1| predicted protein [Nematostella vectensis]
Length = 196
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKE EKD+SV R RM+ Y K GMR +VE +L+V EH PHILLLQ+
Sbjct: 11 YPLTNYTFGTKESLYEKDSSVQARFQRMREEYEKFGMRKTVEGVLIVHEHGLPHILLLQL 70
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIM- 172
G TF KLPGG L PGE+EI+GLKR +T L PDW + +C+ WWRPNFE
Sbjct: 71 GTTFFKLPGGELVPGEDEIDGLKRSMTEILSRPEHGPEPDWFVEDCLGNWWRPNFEAPQA 130
Query: 173 --YPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YPY P HITKPKE +KLFLV L E+ FAVP+N KL+A PLFEL+DN
Sbjct: 131 RCYPYVPAHITKPKELRKLFLVQLGEKANFAVPRNYKLVAAPLFELFDNA 180
>gi|347841328|emb|CCD55900.1| hypothetical protein [Botryotinia fuckeliana]
Length = 323
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 128/180 (71%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ +PLS+YTFGTKE + E+D SV RL R++ +Y++ GMR + E IL+ EHNHPHIL
Sbjct: 80 TIRLFPLSNYTFGTKETQPEEDPSVLARLKRLEEHYVEHGMRRTCEGILVCHEHNHPHIL 139
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG LKP ++E+EG K++L +L + + +W+IG+ +A WW
Sbjct: 140 MLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQFSGEGVNEEWEIGDTLAQWW 199
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L ++ +VPKN+KLLAVPLFELYDN +
Sbjct: 200 RPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPKNMKLLAVPLFELYDNTARYG 259
>gi|443730241|gb|ELU15845.1| hypothetical protein CAPTEDRAFT_219560 [Capitella teleta]
Length = 195
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 116/167 (69%), Gaps = 1/167 (0%)
Query: 53 TYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ 112
YPL++YTFGTKE EKD SV +R RM+ + GMR + E +L+V EH PH+LLLQ
Sbjct: 7 AYPLTNYTFGTKEALYEKDASVQERFKRMRQEFADNGMRRTAEGVLIVHEHGLPHVLLLQ 66
Query: 113 IGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIM 172
+G TF KLPGG LK GE++ EGLKR LT LG A DW I + + WWRPNFE
Sbjct: 67 LGTTFFKLPGGELKNGEDQTEGLKRLLTEMLGRQDQAPT-DWTIEDTIGNWWRPNFEPPQ 125
Query: 173 YPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
YPY P HITKPKE K+LFLV L E+ FAVP+N KL+A PLFELYDN
Sbjct: 126 YPYIPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELYDN 172
>gi|154284992|ref|XP_001543291.1| hypothetical protein HCAG_00337 [Ajellomyces capsulatus NAm1]
gi|150406932|gb|EDN02473.1| hypothetical protein HCAG_00337 [Ajellomyces capsulatus NAm1]
Length = 285
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVLVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIW 163
L+LQI N F KLPG L ++E+EG K +L +L + + DW+IG+ +A W
Sbjct: 87 LMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQW 146
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 147 WRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARY 206
Query: 224 A 224
Sbjct: 207 G 207
>gi|325093550|gb|EGC46860.1| cleavage and polyadenylation specific subunit [Ajellomyces
capsulatus H88]
Length = 285
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVLVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIW 163
L+LQI N F KLPG L ++E+EG K +L +L + + DW+IG+ +A W
Sbjct: 87 LMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQW 146
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 147 WRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARY 206
Query: 224 A 224
Sbjct: 207 G 207
>gi|312372821|gb|EFR20698.1| hypothetical protein AND_19658 [Anopheles darlingi]
Length = 530
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 125/204 (61%), Gaps = 25/204 (12%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLV---- 100
M + +N YPL++YTFGTKEP EKD SV R RM+ + K GMR SVE +LLV
Sbjct: 35 MTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVSAVL 94
Query: 101 --------------------QEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLT 140
EH PH+LLLQ+G TF KLPGG L GE+E+EGLKR LT
Sbjct: 95 QRESFANGGFIRFFPRRGQVHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVEGLKRLLT 154
Query: 141 SKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYF 200
LG + DW + + + WWRPNFE YPY PPHITKPKE K+LFLV L E+ F
Sbjct: 155 ETLGRQD-GVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKALF 213
Query: 201 AVPKNLKLLAVPLFELYDNVQIWA 224
AVPKN KL+A PLFELYDN Q +
Sbjct: 214 AVPKNYKLVAAPLFELYDNSQGYG 237
>gi|70985266|ref|XP_748139.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus Af293]
gi|66845767|gb|EAL86101.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus Af293]
gi|159125937|gb|EDP51053.1| cleavage and polyadenylation specific factor 5 [Aspergillus
fumigatus A1163]
Length = 334
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+L
Sbjct: 84 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHVL 143
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K++L +L + + DW+IG+ +A WW
Sbjct: 144 MLQIANAFFKLPGDYLHFDDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 203
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 204 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 263
>gi|256070717|ref|XP_002571689.1| pre-mRNA cleavage factor im 25kD subunit [Schistosoma mansoni]
Length = 215
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 5/186 (2%)
Query: 42 ESKMVTSPVVNT---YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAIL 98
E + ++PV T YPL SY+FGTKEP E+D SV R R++ ++ K GMR SVE IL
Sbjct: 13 EKFLHSTPVAKTITLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGIL 72
Query: 99 LVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGE 158
LV EHN PH+LLLQ+G TF KLPGG L PGE EIEGLKR L+ LG V DW +
Sbjct: 73 LVHEHNLPHVLLLQLG-TFFKLPGGELHPGEEEIEGLKRLLSEMLGRTDGIPV-DWIPED 130
Query: 159 CVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYD 218
C+ WWRPNFE YPY P H+TKPKE +LFL+ L E+ FAVP N KL+A PLFEL+D
Sbjct: 131 CIGNWWRPNFEPPRYPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFD 190
Query: 219 NVQIWA 224
N + +
Sbjct: 191 NARAYG 196
>gi|378726618|gb|EHY53077.1| autocrine motility factor receptor [Exophiala dermatitidis
NIH/UT8656]
Length = 287
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 125/177 (70%), Gaps = 1/177 (0%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SVA RL R++ +Y K GMR + E IL+ EHNHPH+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVAARLKRLEEHYEKYGMRRTCEGILVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP-DWQIGECVAIWWRPN 167
L+LQI N F KLPG L +EIEG K +L +L +P +W+IG+C+A WWRPN
Sbjct: 87 LMLQIANAFFKLPGDYLPHDADEIEGFKMRLNERLAPTNPKEGDTEWEIGDCLAQWWRPN 146
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
ET +YP+ P H+++PKE KKL+L+HL + +VPKN+KLLAVPLFELYDN +
Sbjct: 147 HETFLYPFLPAHVSRPKELKKLYLIHLPPNKVLSVPKNMKLLAVPLFELYDNTARYG 203
>gi|226471030|emb|CAX70596.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226471032|emb|CAX70597.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226487322|emb|CAX75526.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
gi|226487324|emb|CAX75527.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
Length = 215
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 124/181 (68%), Gaps = 5/181 (2%)
Query: 47 TSPVVNT---YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH 103
++PV T YPL SY+FGTKEP E+D SV R R++ ++ K GMR SVE ILLV EH
Sbjct: 18 STPVAKTITLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEH 77
Query: 104 NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163
N PH+LLLQ+G TF KLPGG L PGE EIEGLKR L+ LG V DW +C+ W
Sbjct: 78 NLPHVLLLQLG-TFFKLPGGELHPGEEEIEGLKRLLSEMLGRTDGIPV-DWIPEDCIGNW 135
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFE YPY P H+TKPKE +LFL+ L E+ FAVP N KL+A PLFEL+DN + +
Sbjct: 136 WRPNFEPPRYPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARAY 195
Query: 224 A 224
Sbjct: 196 G 196
>gi|449446606|ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
Length = 217
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 127/174 (72%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
++ YPLS+Y FG+KEP + KD +++DR+ RMK NY G+RT VEA++LV+ HPH+LL
Sbjct: 24 IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLL 83
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
QI N+ KLPGGR++P E++I+GL RKLT KL AN + W++ EC+ +WWRP+FET
Sbjct: 84 FQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFET 143
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
+++PY ++ KEC KLFLV L E F VPKNLKL+AVPL ++++N + +
Sbjct: 144 LLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYG 197
>gi|444725590|gb|ELW66151.1| Chromodomain-helicase-DNA-binding protein 9 [Tupaia chinensis]
Length = 1142
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 6/178 (3%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
++ YPL++YTFGTKEP EKD+SVA R M+ + K GMR +VE IL+V EH PH+LL
Sbjct: 96 ISLYPLTNYTFGTKEPLYEKDSSVAARFQHMREEFYKIGMRRTVEGILIVHEHRLPHVLL 155
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L PGE+E+EGLK L +++ N +W I +C+ WWRPNFE
Sbjct: 156 LQLGTTFFKLPGGELNPGEDEVEGLKH-LMTEIWVNK-----EWVIDDCIGNWWRPNFEP 209
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYFN 228
YPY P HITKPKE KKLFLV L E+ F VPKN KL+A LF+LYDN + S +
Sbjct: 210 PQYPYTPAHITKPKEYKKLFLVQLQEKALFIVPKNYKLVAAQLFKLYDNAPGYGSIIS 267
>gi|302410621|ref|XP_003003144.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium albo-atrum VaMs.102]
gi|261358168|gb|EEY20596.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium albo-atrum VaMs.102]
Length = 268
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYTQYGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWR 165
+LQI N F KLPG L+P ++E EG K +L +L DWQ+G+C+A WWR
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDESEGFKARLDERLAPVGRIGEGEEKGDWQLGDCLAQWWR 147
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 PNFETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|351710258|gb|EHB13177.1| Cleavage and polyadenylation specificity factor subunit 5
[Heterocephalus glaber]
Length = 227
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EK +SVA R M+ + K G+R ++E +L+V EH P +L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKSSSVAARFQHMREEFDKIGIRRTIEGVLIVHEHRLPRVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L P E+E+EGLK +T LG ++ DW I +C+ WWR NFE
Sbjct: 96 LLQLGTTFFKLPGGELNPREDEVEGLKCLMTEILGRQD-GVLQDWVIDDCIGNWWRSNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
+ YPY P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN +
Sbjct: 155 PLQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNASGYG 209
>gi|322698980|gb|EFY90745.1| cleavage and polyadenylation specific factor 5 [Metarhizium acridum
CQMa 102]
Length = 264
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 4/178 (2%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ ++ + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFAEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWRP 166
LQI N F KLPG L+P ++E G K +L +L DW++G+C+A WWRP
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEEAGFKARLDERLAPVGRIGEGEEAGDWEVGDCLAQWWRP 148
Query: 167 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
NFET MYP+ P H+T+PKECKKL+ +HL + + +VPKN+KLLAVPLFELYDN +
Sbjct: 149 NFETFMYPFVPAHVTRPKECKKLYFIHLPKTKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|346971150|gb|EGY14602.1| cleavage and polyadenylation specificity factor subunit 5
[Verticillium dahliae VdLs.17]
Length = 268
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGVKETQPEEDPSVLARLKRLEEHYTQYGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWR 165
+LQI N F KLPG L+P ++E EG K +L +L DWQ+G+C+A WWR
Sbjct: 88 MLQIANAFFKLPGDYLRPEDDESEGFKARLDERLAPVGRIGEGEEKGDWQLGDCLAQWWR 147
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
PNFET MYP+ P H+T+PKECKKL+ + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 PNFETFMYPFIPAHVTRPKECKKLYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|322707058|gb|EFY98637.1| cleavage and polyadenylation specific factor 5 [Metarhizium
anisopliae ARSEF 23]
Length = 264
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 4/178 (2%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ ++ + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWWRP 166
LQI N F KLPG L+P ++E G K +L +L DW++G+C+A WWRP
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEEAGFKARLDERLAPVGRIGEGEEAGDWEVGDCLAQWWRP 148
Query: 167 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
NFET MYP+ P H+T+PKECKKL+ +HL + + +VPKN+KLLAVPLFELYDN +
Sbjct: 149 NFETFMYPFVPAHVTRPKECKKLYFIHLPKTKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|119499145|ref|XP_001266330.1| cleavage and polyadenylation specific factor 5 [Neosartorya
fischeri NRRL 181]
gi|119414494|gb|EAW24433.1| cleavage and polyadenylation specific factor 5 [Neosartorya
fischeri NRRL 181]
Length = 278
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K++L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|224087967|ref|XP_002308275.1| predicted protein [Populus trichocarpa]
gi|222854251|gb|EEE91798.1| predicted protein [Populus trichocarpa]
Length = 210
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 129/177 (72%), Gaps = 1/177 (0%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S V+ YPL SY FG+K+P +D ++ADR+ RMK N+ G+RTSV+A++LV+ HPH
Sbjct: 16 STVIEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSARGLRTSVQAVMLVELFKHPH 75
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 167
+LLLQ+ N F KLPGGRL+PGE++I+GL+RKL+ L N W++G+C+ +WWR +
Sbjct: 76 LLLLQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNEDE-TDHWEVGDCLGMWWRSD 134
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
FET++YPY PP++ PKEC KL++V L F VPKNLKLLAVPL ++++N + +
Sbjct: 135 FETLLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHKTYG 191
>gi|121719266|ref|XP_001276338.1| cleavage and polyadenylation specific factor 5 [Aspergillus
clavatus NRRL 1]
gi|119404536|gb|EAW14912.1| cleavage and polyadenylation specific factor 5 [Aspergillus
clavatus NRRL 1]
Length = 278
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K++L +L + + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|353233014|emb|CCD80369.1| putative pre-mRNA cleavage factor im, 25kD subunit [Schistosoma
mansoni]
Length = 208
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 120/174 (68%), Gaps = 2/174 (1%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPL SY+FGTKEP E+D SV R R++ ++ K GMR SVE ILLV EHN PH+LL
Sbjct: 18 VFRYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEHNLPHVLL 77
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L PGE EIEGLKR L+ LG V DW +C+ WWRPNFE
Sbjct: 78 LQLG-TFFKLPGGELHPGEEEIEGLKRLLSEMLGRTDGIPV-DWIPEDCIGNWWRPNFEP 135
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY P H+TKPKE +LFL+ L E+ FAVP N KL+A PLFEL+DN + +
Sbjct: 136 PRYPYIPAHVTKPKEQTRLFLIQLPEKTLFAVPSNYKLVAAPLFELFDNARAYG 189
>gi|358387117|gb|EHK24712.1| hypothetical protein TRIVIDRAFT_30132 [Trichoderma virens Gv29-8]
Length = 264
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 125/180 (69%), Gaps = 8/180 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ ++ + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFSEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIWW 164
LQI N F KLPG L+P ++E+EG K +L +LG A DW++GEC+A +W
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAG--DWEVGECLAQFW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKK + + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 147 RPNFETFMYPFIPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|242770229|ref|XP_002341936.1| cleavage and polyadenylation specific factor 5 [Talaromyces
stipitatus ATCC 10500]
gi|218725132|gb|EED24549.1| cleavage and polyadenylation specific factor 5 [Talaromyces
stipitatus ATCC 10500]
Length = 277
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYEKHGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++EI G K +L +L + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHHDDDEITGFKTRLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+L+ L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYLIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|169771819|ref|XP_001820379.1| cleavage and polyadenylation specificity factor subunit 5
[Aspergillus oryzae RIB40]
gi|238485582|ref|XP_002374029.1| cleavage and polyadenylation specific factor 5 [Aspergillus flavus
NRRL3357]
gi|83768238|dbj|BAE58377.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698908|gb|EED55247.1| cleavage and polyadenylation specific factor 5 [Aspergillus flavus
NRRL3357]
gi|391874667|gb|EIT83512.1| mRNA cleavage factor I subunit [Aspergillus oryzae 3.042]
Length = 275
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDQHGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K++L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|303319441|ref|XP_003069720.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109406|gb|EER27575.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320040829|gb|EFW22762.1| cleavage and polyadenylation specific factor 5 [Coccidioides
posadasii str. Silveira]
Length = 277
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG LK ++E++G K +L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLKHTDDEVDGFKARLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|340522024|gb|EGR52257.1| predicted protein [Trichoderma reesei QM6a]
Length = 264
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 125/180 (69%), Gaps = 8/180 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V YPLS+YTFG KE + E+D SV RL R++ ++ + GMR + E IL+ EHNHPHIL+
Sbjct: 29 VTLYPLSNYTFGVKETQPEEDPSVIARLKRLEEHFNEHGMRRTCEGILVCHEHNHPHILM 88
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANSPALVPDWQIGECVAIWW 164
LQI N F KLPG L+P ++E+EG K +L +LG A DW++GEC+A +W
Sbjct: 89 LQIANAFFKLPGDYLRPEDDEVEGFKARLDERLAPVGRLGEGEEAG--DWEVGECLAQFW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKK + + L + + +VPKN+KLLAVPLFELYDN +
Sbjct: 147 RPNFETFMYPFIPAHVTRPKECKKFYFIQLPKSKVLSVPKNMKLLAVPLFELYDNTARYG 206
>gi|116789706|gb|ABK25350.1| unknown [Picea sitchensis]
Length = 161
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 114/141 (80%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 104
M + VV +PLS Y+FG KE K++KD ++DRL RM+ N+M++G+RT VE ILLV E+
Sbjct: 1 MSSHLVVKVHPLSCYSFGKKEAKVDKDIFLSDRLDRMRANFMRDGLRTYVEGILLVYEYG 60
Query: 105 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164
HPH+LLLQ GN +LPGGRL+PGENEIEGLKRKLTSKL ++S ++ P WQIGEC +WW
Sbjct: 61 HPHLLLLQKGNKIIRLPGGRLRPGENEIEGLKRKLTSKLSSSSSSVQPIWQIGECAGVWW 120
Query: 165 RPNFETIMYPYCPPHITKPKE 185
RPNFET+MYPYCPPHI KPK+
Sbjct: 121 RPNFETLMYPYCPPHINKPKK 141
>gi|169616107|ref|XP_001801469.1| hypothetical protein SNOG_11226 [Phaeosphaeria nodorum SN15]
gi|111060605|gb|EAT81725.1| hypothetical protein SNOG_11226 [Phaeosphaeria nodorum SN15]
Length = 261
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTK+ + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 17 TIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYQEHGMRRTCEGILVCHEHNHPHIL 76
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + +WQ+G+ +A WW
Sbjct: 77 MLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVNDEWQVGDTLAQWW 136
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN +
Sbjct: 137 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 196
>gi|295665162|ref|XP_002793132.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226278046|gb|EEH33612.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 278
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 126/181 (69%), Gaps = 5/181 (2%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIW 163
L+LQI N F KLPG L ++E+EG K +L +L + + +W+IG+ +A W
Sbjct: 87 LMLQIANAFFKLPGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQW 146
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 147 WRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARY 206
Query: 224 A 224
Sbjct: 207 G 207
>gi|296817503|ref|XP_002849088.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma otae CBS 113480]
gi|238839541|gb|EEQ29203.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma otae CBS 113480]
Length = 275
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLQHSDDEIEGFKSRLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|119182817|ref|XP_001242516.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|392865416|gb|EAS31200.2| cleavage and polyadenylation specific factor 5 [Coccidioides
immitis RS]
Length = 277
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 126/180 (70%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG LK ++E++G K +L +L + + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLKHTDDEVDGFKARLNERLAPVGSQFSGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|261202886|ref|XP_002628657.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis SLH14081]
gi|239590754|gb|EEQ73335.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis SLH14081]
gi|239612473|gb|EEQ89460.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis ER-3]
gi|327350559|gb|EGE79416.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 286
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K +L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|327301289|ref|XP_003235337.1| cleavage and polyadenylation specific factor 5 [Trichophyton rubrum
CBS 118892]
gi|326462689|gb|EGD88142.1| cleavage and polyadenylation specific factor 5 [Trichophyton rubrum
CBS 118892]
Length = 274
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|302667099|ref|XP_003025141.1| hypothetical protein TRV_00666 [Trichophyton verrucosum HKI 0517]
gi|291189229|gb|EFE44530.1| hypothetical protein TRV_00666 [Trichophyton verrucosum HKI 0517]
Length = 272
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 26 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 85
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + DW++G+ +A WW
Sbjct: 86 MLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 145
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 146 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 205
>gi|396492444|ref|XP_003843800.1| similar to cleavage and polyadenylation specificity factor subunit
5 [Leptosphaeria maculans JN3]
gi|312220380|emb|CBY00321.1| similar to cleavage and polyadenylation specificity factor subunit
5 [Leptosphaeria maculans JN3]
Length = 272
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTK+ + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYTEYGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + +WQ+G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVNDEWQVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|315049019|ref|XP_003173884.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma gypseum CBS 118893]
gi|311341851|gb|EFR01054.1| cleavage and polyadenylation specificity factor subunit 5
[Arthroderma gypseum CBS 118893]
Length = 274
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|358368193|dbj|GAA84810.1| cleavage and polyadenylation specific factor 5 [Aspergillus
kawachii IFO 4308]
Length = 277
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDLHGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K++L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLNFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|340383433|ref|XP_003390222.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Amphimedon queenslandica]
Length = 212
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
++ YPLS+YTFGTKEP EKD +V R R+K +Y K GMR SV+ ++LV EHN PH+L
Sbjct: 21 LIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLPHVL 80
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G+TF KLP G + PGE+E EG++R + LG L W + + VA WWRPNFE
Sbjct: 81 LLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLGKEDTPL-STWIVEDVVANWWRPNFE 139
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+ YPY P H T PKE KKLFLV L ER F VP+N KL+A PLFELYDN
Sbjct: 140 SPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDN 189
>gi|340385713|ref|XP_003391353.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Amphimedon queenslandica]
Length = 202
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
++ YPLS+YTFGTKEP EKD +V R R+K +Y K GMR SV+ ++LV EHN PH+L
Sbjct: 11 LIKLYPLSNYTFGTKEPLYEKDRTVESRFLRLKEDYEKTGMRRSVDGVVLVHEHNLPHVL 70
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G+TF KLP G + PGE+E EG++R + LG L W + + VA WWRPNFE
Sbjct: 71 LLQLGSTFFKLPSGEVGPGESEAEGVQRIVNDTLGKEDTPL-STWIVEDVVANWWRPNFE 129
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+ YPY P H T PKE KKLFLV L ER F VP+N KL+A PLFELYDN
Sbjct: 130 SPQYPYIPAHCTHPKEHKKLFLVQLPERTMFHVPRNYKLVAAPLFELYDN 179
>gi|400599110|gb|EJP66814.1| cleavage and polyadenylation specificity factor subunit 5
[Beauveria bassiana ARSEF 2860]
Length = 265
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P V YP S+YTFG KE + E+D SV RL R++ ++ + GMR + E IL+ EHN PHI
Sbjct: 27 PKVRVYPFSNYTFGVKETQPEEDPSVIARLKRLEEHFAEHGMRRTCEGILVCHEHNQPHI 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVAIWW 164
L+LQI N F KLPG L+P + EI+G K +L +L +W+IGEC++ WW
Sbjct: 87 LMLQIANAFFKLPGDYLRPEDGEIQGFKTRLDERLAPVGRLGEDEKDGEWEIGECLSQWW 146
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
RPNFET MYP+ P H+T+PKECKK++L+HL + + +VPKN+KLLAVPLFELY+N
Sbjct: 147 RPNFETFMYPFVPAHVTRPKECKKIYLIHLPKNKVLSVPKNMKLLAVPLFELYEN 201
>gi|145251974|ref|XP_001397500.1| cleavage and polyadenylation specificity factor subunit 5
[Aspergillus niger CBS 513.88]
gi|134083042|emb|CAK42804.1| unnamed protein product [Aspergillus niger]
gi|350633409|gb|EHA21774.1| hypothetical protein ASPNIDRAFT_183952 [Aspergillus niger ATCC
1015]
Length = 277
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDLHGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++E+EG K++L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHFEDDEVEGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|406868246|gb|EKD21283.1| putative cleavage and polyadenylation specificity factor subunit 5
[Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 264
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ +PLS+YTFGTKE + E+D SV RL R++ +Y GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLFPLSNYTFGTKETQPEEDPSVLARLKRLEEHYDVHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG LK ++EIEG K +L +L + + +W+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLKEDDDEIEGFKMRLNERLAPVGTQFSGEGVNEEWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L ++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRQKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|358254013|dbj|GAA54051.1| cleavage and polyadenylation specificity factor subunit 5
[Clonorchis sinensis]
Length = 215
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/186 (53%), Positives = 125/186 (67%), Gaps = 5/186 (2%)
Query: 42 ESKMVTSPVVNT---YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAIL 98
E + ++PV T YPL SY+FGTK+P E+D SV R R++ ++ K GMR SVE +L
Sbjct: 13 EKFLQSTPVAKTITLYPLKSYSFGTKDPNYERDRSVPARFQRLQEDFDKYGMRRSVEGVL 72
Query: 99 LVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGE 158
LV EHN PH+LLLQ+G TF KLPGG L PGE E+EGLKR L+ LG V W +
Sbjct: 73 LVHEHNLPHVLLLQLG-TFFKLPGGELNPGEEELEGLKRLLSEMLGRTDGVPV-GWVPED 130
Query: 159 CVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYD 218
C+ WWRPNFE YPY P H+TKPKE +LFL+ L E+ FAVP N KL+A PLFEL+D
Sbjct: 131 CIGNWWRPNFEPPRYPYIPAHVTKPKEHTRLFLMQLPEKTLFAVPSNYKLVAAPLFELFD 190
Query: 219 NVQIWA 224
N + +
Sbjct: 191 NARAYG 196
>gi|255955443|ref|XP_002568474.1| Pc21g14600 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590185|emb|CAP96357.1| Pc21g14600 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 278
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V YPLS+YTFGTKE + E+D SV RL R++ Y GMR + E IL+ EHNHPH+L
Sbjct: 28 TVRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEQYRLHGMRRTCEGILVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++EIEG K++L +L + + DW+I + +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHHEDDEIEGFKKRLNERLAPVGSQFSGEGVNDDWEISDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPAHVTRPKECKKLYFIRLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|345569784|gb|EGX52610.1| hypothetical protein AOL_s00007g393 [Arthrobotrys oligospora ATCC
24927]
Length = 276
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 123/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E IL+ EH HPHIL
Sbjct: 30 TIRLYPLSNYTFGTKENQPEEDPSVLARLQRLQEHYEKHGMRRTCEGILVCHEHCHPHIL 89
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+P E+EI G K +L +L + + +W+IG+ +A WW
Sbjct: 90 MLQIANAFFKLPGDYLQPEEDEISGFKARLNERLAPVGNQFSGEGVNDEWEIGDTLAQWW 149
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET +YP+ P H+T+PKE KKL+ +HL + +VPKN+KLLAVPLFELYDN +
Sbjct: 150 RPNFETFLYPFIPAHVTRPKEVKKLYFIHLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 209
>gi|346324790|gb|EGX94387.1| cleavage and polyadenylation specific factor 5 [Cordyceps militaris
CM01]
Length = 266
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 127/178 (71%), Gaps = 10/178 (5%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YP S+YTFG KE + E+D SV RL R++ +Y + GMR + E IL+ EHNH HI
Sbjct: 27 PTIRVYPSSNYTFGVKETQPEEDPSVIARLRRLEEHYAEHGMRRTCEGILVCHEHNHAHI 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKL------TSKLGANS-PALVPDWQIGECVA 161
L+LQI N F KLPG L+P ++E +G K +L +LGA+ P +W+IG+C++
Sbjct: 87 LMLQIANAFFKLPGDYLRPEDDENDGFKVRLDERLAPVGRLGADEKPG---EWEIGDCLS 143
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
WWRPNFET MYP+ P HIT+PKECKK++L+HL + + +VPKN+KLLAVPLFELY+N
Sbjct: 144 QWWRPNFETFMYPFLPAHITRPKECKKIYLIHLPKTKVLSVPKNMKLLAVPLFELYEN 201
>gi|212541905|ref|XP_002151107.1| cleavage and polyadenylation specific factor 5 [Talaromyces
marneffei ATCC 18224]
gi|210066014|gb|EEA20107.1| cleavage and polyadenylation specific factor 5 [Talaromyces
marneffei ATCC 18224]
Length = 282
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y GMR + E +L+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKENQPEEDPSVLARLKRLEEHYDLYGMRRTCEGVLVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++EI G K +L +L + + DW++G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHHDDDEIAGFKTRLNERLAPVGSQFSGEGVNEDWEVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+L+ L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFLPGHVTRPKECKKLYLIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|451853881|gb|EMD67174.1| hypothetical protein COCSADRAFT_82596 [Cochliobolus sativus ND90Pr]
gi|451993650|gb|EMD86122.1| hypothetical protein COCHEDRAFT_1146579 [Cochliobolus
heterostrophus C5]
gi|451999796|gb|EMD92258.1| hypothetical protein COCHEDRAFT_1224116 [Cochliobolus
heterostrophus C5]
Length = 275
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 122/180 (67%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTK+ + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLYPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYSEHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++EIEG K +L +L + +W +G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVNDEWVVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|339245685|ref|XP_003374476.1| cleavage and polyadenylation specificity factor subunit 5
[Trichinella spiralis]
gi|316972263|gb|EFV55946.1| cleavage and polyadenylation specificity factor subunit 5
[Trichinella spiralis]
Length = 221
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFG+K + E+D +V R RM+ Y K GMR SV+ +L+V EHN PH+L
Sbjct: 30 TVNVYPLTNYTFGSKSAQQERDQTVQARFTRMRNEYEKHGMRRSVDGVLIVHEHNLPHVL 89
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G+TF +LPGG L+PGE+E+EGLKR LT LG P W I + ++ WWRPNFE
Sbjct: 90 LLQLGSTFFRLPGGELEPGEDEVEGLKRLLTDCLGREDGEQTP-WVIEDTLSNWWRPNFE 148
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
YPY H+ KPKE K+ LV L E+ FAVP+N KL+A P+FELYDN
Sbjct: 149 PARYPYLCTHVCKPKEHIKMLLVQLPEKALFAVPRNYKLVAAPIFELYDN 198
>gi|255082171|ref|XP_002508304.1| predicted protein [Micromonas sp. RCC299]
gi|226523580|gb|ACO69562.1| predicted protein [Micromonas sp. RCC299]
Length = 221
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 126/179 (70%), Gaps = 5/179 (2%)
Query: 46 VTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNH 105
V + ++ YP+S+YTFG+K K +KD +VA+ + R K Y KEGMR +VEAILLV +H+H
Sbjct: 15 VGARAIHVYPVSNYTFGSKAAKADKDATVAEAMIRYKDKYEKEGMRRTVEAILLVNQHDH 74
Query: 106 PHILLLQ----IGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL-VPDWQIGECV 160
PH+LLLQ G KLPGGRL+ GE E+ GL+RKL +KL + +L + W+ G+CV
Sbjct: 75 PHVLLLQRTMAGGGVEYKLPGGRLRHGEGEVAGLQRKLHNKLSPSEQSLRIEHWECGDCV 134
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
A W+RP FE YPY P H+TKPKE + +++ L ER F VPKNLKLLAVPLFE+Y N
Sbjct: 135 ARWFRPAFEPNYYPYLPAHVTKPKESRTVYIAQLPERCKFCVPKNLKLLAVPLFEMYAN 193
>gi|17507315|ref|NP_492334.1| Protein CFIM-1 [Caenorhabditis elegans]
gi|3877104|emb|CAB02106.1| Protein CFIM-1 [Caenorhabditis elegans]
Length = 227
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTK+ + EKD SV +R RMK Y GMR SVEA+L+V EH+ PHIL
Sbjct: 33 TINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVMGMRRSVEAVLIVHEHSLPHIL 92
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQIG TF KLPGG L+ GE+EI G+ R L LG +W I + + WWRPNF+
Sbjct: 93 LLQIGTTFYKLPGGELELGEDEISGVTRLLNETLGRTD-GETNEWTIEDEIGNWWRPNFD 151
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY P H+TKPKE KL LV L + F VPKN KL+A PLFELYDN +
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNAAAYG 206
>gi|268567562|ref|XP_002640028.1| Hypothetical protein CBG12500 [Caenorhabditis briggsae]
Length = 227
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTK+ + EKD SV +R RMK Y GMR SVEA+L+V EH+ PHIL
Sbjct: 33 TINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLPHIL 92
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQIG TF KLPGG L+ GE+EI G+ R L LG +W I + + WWRPNF+
Sbjct: 93 LLQIGTTFYKLPGGELEIGEDEISGVTRLLNDTLGRTD-GESNEWTIEDEIGNWWRPNFD 151
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY P H+TKPKE KL LV L + F VPKN KL+A PLFELYDN +
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPAKSTFCVPKNFKLVAAPLFELYDNAAAYG 206
>gi|308499815|ref|XP_003112093.1| CRE-CFIM-1 protein [Caenorhabditis remanei]
gi|308268574|gb|EFP12527.1| CRE-CFIM-1 protein [Caenorhabditis remanei]
Length = 227
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKE + EKD SV +R RMK Y GMR SVEA+L+V EH+ PHIL
Sbjct: 33 TINVYPLTNYTFGTKEAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLPHIL 92
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQIG TF KLPGG L+ GE+E+ G+ R L LG +W I + + WWRPNF+
Sbjct: 93 LLQIGTTFYKLPGGELEIGEDEVSGVTRLLNETLGRTD-GESNEWTIEDEIGNWWRPNFD 151
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY P H+TKPKE KL LV L + F VPKN KL+A PLFELYDN +
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNAAAYG 206
>gi|330948046|ref|XP_003307047.1| hypothetical protein PTT_20368 [Pyrenophora teres f. teres 0-1]
gi|311315165|gb|EFQ84874.1| hypothetical protein PTT_20368 [Pyrenophora teres f. teres 0-1]
Length = 275
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 122/180 (67%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ +PLS+YTFGTK+ + E+D SV RL R++ +Y + GMR + E IL+ EHNHPHIL
Sbjct: 28 TIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEGILVCHEHNHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+ ++E+EG K +L +L + +W +G+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLRAEDDEVEGFKARLNERLAPVGTQFTGEGVNDEWVVGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|308807264|ref|XP_003080943.1| mRNA cleavage factor I subunit (ISS) [Ostreococcus tauri]
gi|116059404|emb|CAL55111.1| mRNA cleavage factor I subunit (ISS) [Ostreococcus tauri]
Length = 279
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 123/178 (69%), Gaps = 2/178 (1%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VV+ + L +YTFGTK + EKD+S A RL RMK Y +EG R SV AI +V +H PHIL
Sbjct: 85 VVDVHALGNYTFGTKRARGEKDSSAAARLLRMKTQYEREGKRRSVGAICMVSQHRTPHIL 144
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP--DWQIGECVAIWWRPN 167
LLQI T KLPGGRL+ GE E EGL RK+ +KL + ++ +G+ VA W+R +
Sbjct: 145 LLQITPTTFKLPGGRLRAGEGEREGLARKMQNKLQPEREDGLGAYEFDVGDQVATWYRTS 204
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
FE MYPY P HITKPKE K+F+VHL E+ FAVPKNLKLLAVPLFELY N + + S
Sbjct: 205 FEPQMYPYLPAHITKPKEEHKIFIVHLPEKAAFAVPKNLKLLAVPLFELYGNPEKYGS 262
>gi|296410690|ref|XP_002835068.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627843|emb|CAZ79189.1| unnamed protein product [Tuber melanosporum]
Length = 261
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E IL+ EH HPHIL
Sbjct: 28 TIRLYPLSNYTFGTKENQPEEDPSVLARLQRLQEHYEQYGMRRTCEGILVCHEHCHPHIL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L E+E+EG K +L +L + + +W+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLHHHESELEGFKSRLNERLAPVGSQFSGEGVNDEWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN +
Sbjct: 148 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 207
>gi|341876875|gb|EGT32810.1| hypothetical protein CAEBREN_19310 [Caenorhabditis brenneri]
gi|341898707|gb|EGT54642.1| hypothetical protein CAEBREN_25048 [Caenorhabditis brenneri]
Length = 227
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 116/175 (66%), Gaps = 1/175 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTK+ + EKD SV +R RMK Y GMR SVEA+L+V EH+ PHIL
Sbjct: 33 TINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVVGMRRSVEAVLIVHEHSLPHIL 92
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQIG TF KLPGG L+ GE+E+ G+ R L LG +W I + + WWRPNF+
Sbjct: 93 LLQIGTTFYKLPGGELEIGEDEVSGVTRLLNETLGRTD-GEPNEWTIEDEIGNWWRPNFD 151
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
YPY P H+TKPKE KL LV L + F VPKN KL+A PLFELYDN +
Sbjct: 152 PPRYPYIPAHVTKPKEHTKLLLVQLPSKSTFCVPKNFKLVAAPLFELYDNASAYG 206
>gi|145350060|ref|XP_001419441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579672|gb|ABO97734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 122/172 (70%), Gaps = 2/172 (1%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VV+ Y LS+YTFGTK + EKD + A+RL RM+ Y KEG R SV AI +V +H PH+L
Sbjct: 11 VVDVYSLSNYTFGTKRARGEKDATAAERLLRMRAQYEKEGKRRSVGAICMVSQHRTPHVL 70
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQ--IGECVAIWWRPN 167
LLQI T KLPGGRL+ GE ++EGL RK+ +KL + ++ IG+ VA W+R +
Sbjct: 71 LLQITPTSFKLPGGRLRAGEGDVEGLARKMRNKLQPERDDGLEQYEFDIGDQVATWYRTS 130
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+E MYPY P HITKPKE ++F+ HL E+ YFAVPKNLKLLAVPLFELY N
Sbjct: 131 YEPQMYPYLPAHITKPKEEYRMFVAHLPEKCYFAVPKNLKLLAVPLFELYGN 182
>gi|388493122|gb|AFK34627.1| unknown [Medicago truncatula]
Length = 205
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 124/175 (70%), Gaps = 7/175 (4%)
Query: 51 VNTYPLSSYTFGTKEPKM-EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL+SY FG+KE + KD S L R K NY GMRT VEA+++V+ HPH+L
Sbjct: 17 VNIYPLNSYYFGSKEDAIPSKDHS----LQRFKSNYDARGMRTCVEAVMMVELFKHPHLL 72
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
L QI N+ KLPGGRL+PGE++ +GLKRKL KL A+ + +W++GEC+ +WWRP+FE
Sbjct: 73 LFQIKNSIFKLPGGRLRPGESDTDGLKRKLARKLSADEN--LAEWEVGECLGMWWRPDFE 130
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
T MYP+ PP++ PKEC KLFLV L E F VPKN+KLL+VPL ++ DN + +
Sbjct: 131 TSMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSVPLCQIRDNHKTYG 185
>gi|356558387|ref|XP_003547488.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Glycine max]
Length = 233
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 128/184 (69%)
Query: 52 NTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL 111
+ YPLSSY FG+K+ K + ADR+ RMK NY G+RT VEA++LV+ HPH+LLL
Sbjct: 45 DIYPLSSYYFGSKDAFPSKYLTSADRVLRMKSNYAARGIRTCVEAVVLVELFKHPHLLLL 104
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI 171
QI N+ KLPGGRL+PGE++ +GLKRKL KL +W++GEC+ +WWRP+FET+
Sbjct: 105 QIRNSIYKLPGGRLRPGESDTDGLKRKLARKLSIIEDGDGSEWEVGECLEMWWRPDFETL 164
Query: 172 MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYFNHSS 231
++P PP++ + KEC K+FLV L E F VPKN++LLAVPL ++++N + + + S
Sbjct: 165 VFPCLPPNVKQTKECIKVFLVKLPESRKFIVPKNMRLLAVPLCQVHENHKTYGKIISGSH 224
Query: 232 TAFQ 235
+ Q
Sbjct: 225 SCCQ 228
>gi|221111867|ref|XP_002167860.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Hydra magnipapillata]
Length = 217
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 117/175 (66%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V YPLS+YTFGTKE EKD+SV R RM+ + GMR +VE L+V EH PHIL
Sbjct: 25 TVYLYPLSNYTFGTKEALYEKDSSVQARFQRMRDEFDTLGMRRNVEGCLIVHEHGLPHIL 84
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E EGLKR ++ LG WQ + ++ WWRPNFE
Sbjct: 85 LLQLGTTFFKLPGGELMAGEDESEGLKRSMSEMLGKPDGTDPIAWQCEDVLSNWWRPNFE 144
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
T +YPY P HITKPKE K++FL L E+ F VP+N KL+A PLFEL+DN Q +
Sbjct: 145 TPIYPYIPAHITKPKEQKRIFLTQLPEKATFNVPRNYKLVAAPLFELFDNPQGYG 199
>gi|195167841|ref|XP_002024741.1| GL22627 [Drosophila persimilis]
gi|194108146|gb|EDW30189.1| GL22627 [Drosophila persimilis]
Length = 242
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 120/186 (64%), Gaps = 13/186 (6%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 41 TVNLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 100
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E++GLKR L+ LG + +W + + + WWRPNFE
Sbjct: 101 LLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLGRQD-GVKQEWIVEDTIGNWWRPNFE 159
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLK-----------LLAVPLFELYD 218
YPY PPHITKPKE K+LFLV L E+ Y + L+ L+A PLFELYD
Sbjct: 160 PPQYPYIPPHITKPKEHKRLFLVQLHEKGY-GQERQLRCTLSRSISAVLLVAAPLFELYD 218
Query: 219 NVQIWA 224
N Q +
Sbjct: 219 NSQGYG 224
>gi|193618040|ref|XP_001951264.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Acyrthosiphon pisum]
Length = 226
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPLS+Y FG KE EKD SV+ R RM+ + + GMR SVE +L+V PH+LL
Sbjct: 42 INLYPLSNYKFGKKEHLFEKDPSVSARFQRMREEFKEIGMRRSVEGVLIVHIDWIPHVLL 101
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
L++ F KLPGG+L P E+E+EGLKR LT LG + + DW + + + WWRPNFE
Sbjct: 102 LKLTTNFFKLPGGQLNPAEDEVEGLKRLLTETLGTQN-GVQTDWTVEDTIGNWWRPNFEF 160
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
YPY P HITKPKE K+LFLV L ++ F+VPKN K +AVPLFEL++N Q + +
Sbjct: 161 TTYPYIPAHITKPKEHKRLFLVQLPDKAMFSVPKNYKFVAVPLFELFENAQGYGT 215
>gi|240277471|gb|EER40979.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
capsulatus H143]
Length = 269
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 119/176 (67%), Gaps = 11/176 (6%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E +L+ EHNHPH+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKYGMRRTCEGVLVCHEHNHPHV 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNF 168
L+LQI N F KLPG L ++E+EG K +L +L +G + WWRPNF
Sbjct: 87 LMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNERLAP----------VGSQFS-WWRPNF 135
Query: 169 ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
ET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 136 ETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 191
>gi|428173402|gb|EKX42304.1| hypothetical protein GUITHDRAFT_88112 [Guillardia theta CCMP2712]
Length = 204
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 122/180 (67%), Gaps = 18/180 (10%)
Query: 50 VVNTYPLSSYTFGTKEPK-MEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
++N YPL Y GTKE K EKD S R RM+ Y +EG+R +VE +L+V +H HPH+
Sbjct: 10 ILNAYPLEQYKIGTKEDKDEEKDPS--SRFVRMEAKYEQEGLRRTVEGVLIVHQHKHPHV 67
Query: 109 LLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD--------WQIGEC 159
LLLQ+G + +LPGGRL+PGE E +GLKRKL +KL PD W++GE
Sbjct: 68 LLLQVGAHQIFRLPGGRLRPGETEEDGLKRKLINKLAP------PDFKEEEPLPWEVGEE 121
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+A WWRPNF++ YPY P H+T+PKEC+KLFL+HL E FAV KN L+A+P +ELYDN
Sbjct: 122 LATWWRPNFDSRQYPYLPVHVTRPKECRKLFLIHLPETCTFAVAKNHTLVAIPFYELYDN 181
>gi|425772729|gb|EKV11124.1| Cleavage and polyadenylation specific factor 5 [Penicillium
digitatum PHI26]
gi|425775148|gb|EKV13431.1| Cleavage and polyadenylation specific factor 5 [Penicillium
digitatum Pd1]
Length = 299
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 124/199 (62%), Gaps = 24/199 (12%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V YPLS+YTFGTKE + E+D SV RL R++ +Y GMR + E IL+ EHNHPH+L
Sbjct: 28 TVRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYGLHGMRRTCEGILVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKL-------------------PGGRLKPGENEIEGLKRKLTSKLGA----- 145
+LQI N F KL PG L ++EIEG K++L +L
Sbjct: 88 MLQIANAFFKLQVLYCLYAFIHNPLLIVFRPGDYLHHEDDEIEGFKKRLNERLAPVGSQF 147
Query: 146 NSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKN 205
+ + DW+I + +A WWRPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN
Sbjct: 148 SGEGVNDDWEISDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIRLPKKKVLSVPKN 207
Query: 206 LKLLAVPLFELYDNVQIWA 224
+KLLAVPLFELYDN +
Sbjct: 208 MKLLAVPLFELYDNTARYG 226
>gi|66825117|ref|XP_645913.1| NUDIX hydrolase family protein [Dictyostelium discoideum AX4]
gi|74858879|sp|Q55E68.1|CPSF5_DICDI RecName: Full=Cleavage and polyadenylation specificity factor
subunit 5
gi|60474098|gb|EAL72035.1| NUDIX hydrolase family protein [Dictyostelium discoideum AX4]
Length = 200
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 125/170 (73%), Gaps = 3/170 (1%)
Query: 57 SSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 116
+SY+FG +E K ++ S+ +LAR+K +Y KEG+R +VE I+++ +H HPHILLLQ N
Sbjct: 13 TSYSFGKEEKKEKEQ-SLTSKLARLKDSYEKEGLRKAVEGIIIIHDHGHPHILLLQDNNY 71
Query: 117 FCKLPGGRLKPGENEIEGLKRKLTSKLG-ANSPALVPDWQIGECVAIWWRPNFETIMYPY 175
F KLPGG+LKPGENEI+GL RKLT KL +P W+IG+ V+ WWRPNFE ++PY
Sbjct: 72 F-KLPGGKLKPGENEIDGLIRKLTKKLSPTGTPVSDAPWEIGDHVSTWWRPNFEPSLFPY 130
Query: 176 CPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
P HITKPKECKKLF+V L E+ FAV NL L+AV L+E+Y+N Q + +
Sbjct: 131 IPSHITKPKECKKLFVVTLPEKCKFAVSNNLSLIAVSLYEIYNNSQRYGA 180
>gi|326505750|dbj|BAJ95546.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 213
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 115/183 (62%)
Query: 42 ESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ 101
ES P V YPL Y FG K+ + + ADR R+K N+ G+RT V +LLV+
Sbjct: 11 ESSPEQQPEVAIYPLCRYYFGAKDARPCAGETAADRALRLKANFAARGLRTCVHGVLLVE 70
Query: 102 EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA 161
HPH+LLLQ+ N+ LPGGRL+P E +++GLKRKL+SKL A WQIGEC+
Sbjct: 71 LSGHPHVLLLQVRNSSFLLPGGRLRPAEQDLQGLKRKLSSKLAAEDRNGDHHWQIGECIG 130
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
+WWR F+ +PY PP+ KEC KLFLV L F VP+NLKLLAVPL +++DN Q
Sbjct: 131 MWWRSEFDARPFPYPPPNTRASKECVKLFLVRLPMARQFVVPRNLKLLAVPLSQIHDNAQ 190
Query: 222 IWA 224
++
Sbjct: 191 VYG 193
>gi|242081379|ref|XP_002445458.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
gi|241941808|gb|EES14953.1| hypothetical protein SORBIDRAFT_07g019840 [Sorghum bicolor]
Length = 233
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 119/183 (65%), Gaps = 9/183 (4%)
Query: 51 VNTYPLSSYTFGTKEPKMEKD---TSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
V+ YPL+ Y FG ++ + ADR R+K N+ G+RTSV +LLV+ +HPH
Sbjct: 31 VDIYPLTRYYFGARDAAAAVPRGLETAADRALRLKANFAARGLRTSVHGVLLVELFDHPH 90
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALV---PDWQIGECVA 161
+LLLQ+ N+ LPGGRL+PGE E++GLKRKL+SKL A+ + DWQIGEC+
Sbjct: 91 LLLLQVRNSSFLLPGGRLRPGEEEVQGLKRKLSSKLSFVDADDDQTIEEEDDWQIGECIG 150
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
+WWR FE I +PY PP PKEC KLFLV L F VP+N+KLLAVPL +++ N Q
Sbjct: 151 MWWRSEFEAIPFPYMPPSFRAPKECIKLFLVRLPMSRQFIVPRNMKLLAVPLSQVHGNAQ 210
Query: 222 IWA 224
++
Sbjct: 211 VYG 213
>gi|12848967|dbj|BAB28154.1| unnamed protein product [Mus musculus]
Length = 180
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 105/146 (71%), Gaps = 1/146 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLS 195
YPY P HITKPKE KKLFLV L
Sbjct: 155 PPQYPYIPAHITKPKEHKKLFLVQLQ 180
>gi|238231501|ref|NP_001154164.1| cleavage and polyadenylation specificity factor subunit 5
[Oncorhynchus mykiss]
gi|225704506|gb|ACO08099.1| Cleavage and polyadenylation specificity factor 5 [Oncorhynchus
mykiss]
Length = 213
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 112/171 (65%), Gaps = 18/171 (10%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 39 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKLGMRRAVEGVLIVHEHRLPHVL 98
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG + +G+K+ DW I + + WWRPNFE
Sbjct: 99 LLQLGTTFFKLPGGEIL---GRQDGVKQ---------------DWVIDDSIGNWWRPNFE 140
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
YP+ P HITKPKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 141 PPQYPHIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 191
>gi|320166492|gb|EFW43391.1| cleavage and polyadenylation specific factor 5 [Capsaspora
owczarzaki ATCC 30864]
Length = 198
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P VN +PL++Y+FG K+P+ E+D SV R+ R+K + + G R +VEA+LLV EHNHPH+
Sbjct: 7 PDVNLFPLTNYSFGIKDPQYERDPSVPTRMQRLKDEFEQYGSRRTVEAVLLVHEHNHPHL 66
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNF 168
LLLQ+G TF KLPGG L GE+EI G +R LT L ++ W + E V W+RP++
Sbjct: 67 LLLQLGTTFFKLPGGELDIGEDEITGCQRWLTKTLAVEGTSI--PWNVCEIVCNWYRPSY 124
Query: 169 ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
+ YPY P H+T+PKE +++F+V L AVPKN KL+A PLFEL+DN Q +
Sbjct: 125 DQNQYPYIPGHVTRPKEHRRVFVVELPPNAALAVPKNYKLVAAPLFELHDNPQTYG 180
>gi|226502762|ref|NP_001147338.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
gi|195610244|gb|ACG26952.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 224
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 115/179 (64%), Gaps = 5/179 (2%)
Query: 51 VNTYPLSSYTFGTKEPKM--EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
V+ YPLS Y FG ++ + ADR R+K N+ G+RTSV +LLV+ +HPH+
Sbjct: 26 VDIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHV 85
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALV---PDWQIGECVAIWWR 165
LLLQ+ N+ LPGGRL+PGE E+ GLKRKL+SKL A DWQIG+C+ +WWR
Sbjct: 86 LLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDDAETVEEEDWQIGQCIGMWWR 145
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
FE I +PY PP KEC KLFL+ L F VP+N+KLLAVPL +++ N Q++
Sbjct: 146 SEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYG 204
>gi|270016492|gb|EFA12938.1| hypothetical protein TcasGA2_TC010485 [Tribolium castaneum]
Length = 187
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 108/156 (69%), Gaps = 5/156 (3%)
Query: 46 VTSP----VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ 101
VTSP ++N YPL++Y FGTKEP EKD SV R RM+ + + GMR SVE +LLV
Sbjct: 30 VTSPAINRIINLYPLTNYIFGTKEPLFEKDPSVPARFQRMRDEFERIGMRRSVEGVLLVH 89
Query: 102 EHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA 161
EH PH+LLLQ+G TF KLPGG L PGE+E+EGLKR LT LG + DW + + +
Sbjct: 90 EHGLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRLD-GVKQDWLVEDIIG 148
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSER 197
WWRPNFE YPY PPHITKPKE K+LFLV L E+
Sbjct: 149 NWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQEK 184
>gi|259489948|ref|NP_001159123.1| uncharacterized protein LOC100304199 [Zea mays]
gi|219887529|gb|ACL54139.1| unknown [Zea mays]
Length = 224
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 51 VNTYPLSSYTFGTKEPKM--EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
V+ YPLS Y FG ++ + ADR R+K N+ G+RTSV +LLV+ +HPH+
Sbjct: 26 VDIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHV 85
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALV---PDWQIGECVAIWWR 165
LLLQ+ N+ LPGGRL+PGE E+ GLKRKL+SKL DWQIG+C+ +WWR
Sbjct: 86 LLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDDVEAVEEEDWQIGQCIGMWWR 145
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
FE I +PY PP KEC KLFL+ L F VP+N+KLLAVPL +++ N Q++
Sbjct: 146 SEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYG 204
>gi|413922202|gb|AFW62134.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 277
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 51 VNTYPLSSYTFGTKEPKM--EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
V+ YPLS Y FG ++ + ADR R+K N+ G+RTSV +LLV+ +HPH+
Sbjct: 79 VDIYPLSRYYFGARDAAGVPRGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHV 138
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALV---PDWQIGECVAIWWR 165
LLLQ+ N+ LPGGRL+PGE E+ GLKRKL+SKL DWQIG+C+ +WWR
Sbjct: 139 LLLQVRNSSFLLPGGRLRPGEEEVRGLKRKLSSKLSVVDDVEAVEEEDWQIGQCIGMWWR 198
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
FE I +PY PP KEC KLFL+ L F VP+N+KLLAVPL +++ N Q++
Sbjct: 199 SEFEAIPFPYMPPRFRAAKECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYG 257
>gi|330846152|ref|XP_003294914.1| hypothetical protein DICPUDRAFT_160005 [Dictyostelium purpureum]
gi|325074528|gb|EGC28564.1| hypothetical protein DICPUDRAFT_160005 [Dictyostelium purpureum]
Length = 200
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 122/169 (72%), Gaps = 3/169 (1%)
Query: 57 SSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT 116
+SY+FG +E K ++ SV +L R+K +Y KEG R +VE I++V +H HPHILLLQ N+
Sbjct: 12 TSYSFGKEEKKEKEQ-SVTSKLTRLKESYEKEGQRRAVEGIIIVHDHGHPHILLLQ-DNS 69
Query: 117 FCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD-WQIGECVAIWWRPNFETIMYPY 175
+ KLPGG+LKPGEN++EGL RKLT KL ++ W+IG+ V+ WWRPNFE +YPY
Sbjct: 70 YFKLPGGKLKPGENDVEGLIRKLTKKLSPTGTSVADSPWEIGDHVSTWWRPNFEPTLYPY 129
Query: 176 CPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
P HITKPKECKK+F+V L E+ FAV L L+AV L+E+Y+N Q +
Sbjct: 130 IPTHITKPKECKKMFVVTLPEKCKFAVSNELSLIAVSLYEIYNNSQRYG 178
>gi|392575279|gb|EIW68413.1| hypothetical protein TREMEDRAFT_63582 [Tremella mesenterica DSM
1558]
Length = 224
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 120/181 (66%), Gaps = 7/181 (3%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+ + P+ +YT +E + E+D+SV+ R+ R++ Y + GMR SVE +++V EH PH+L+
Sbjct: 6 LKSSPMQNYTLIEREAQAEEDSSVSARMQRLEKQYAETGMRRSVEGVMVVMEHGFPHVLV 65
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALV-------PDWQIGECVAIW 163
LQ+ N F KLPGG L P E + EGL ++ +LG P DW +GEC++IW
Sbjct: 66 LQVANGFYKLPGGYLDPTEPDGEGLLARMNEQLGVPLPDGGYVRSKDGKDWTVGECLSIW 125
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNF+T YPY P H++ PKEC+KL++V+L ++ A+P N+KL+A+P++E YDN W
Sbjct: 126 WRPNFDTFSYPYLPAHVSFPKECRKLYMVNLPVKKTLAIPANMKLIALPVYEFYDNASRW 185
Query: 224 A 224
Sbjct: 186 G 186
>gi|195427341|ref|XP_002061735.1| GK17156 [Drosophila willistoni]
gi|194157820|gb|EDW72721.1| GK17156 [Drosophila willistoni]
Length = 205
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 108/161 (67%), Gaps = 8/161 (4%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E++GLKR L+ LG + DW + + + WWRPNFE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLGRQD-GVKQDWIVEDTIGNWWRPNFE 164
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSERE-------YFAVP 203
YPY PPHITKPKE K+LFLV L E++ Y+ VP
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQLHEKDDTDRNASYYDVP 205
>gi|195127095|ref|XP_002008004.1| GI12073 [Drosophila mojavensis]
gi|195376959|ref|XP_002047260.1| GJ13342 [Drosophila virilis]
gi|193919613|gb|EDW18480.1| GI12073 [Drosophila mojavensis]
gi|194154418|gb|EDW69602.1| GJ13342 [Drosophila virilis]
Length = 203
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E+EGLKR L+ LG + DW + + + WWRPNFE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQD-GVKQDWIVEDTIGNWWRPNFE 164
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSERE 198
YPY PPHITKPKE K+LFLV L E++
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQLHEKD 193
>gi|195015476|ref|XP_001984210.1| GH15136 [Drosophila grimshawi]
gi|193897692|gb|EDV96558.1| GH15136 [Drosophila grimshawi]
Length = 203
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E+EGLKR L+ LG + DW + + + WWRPNFE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQD-GVKQDWIVEDTIGNWWRPNFE 164
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSERE 198
YPY PPHITKPKE K+LFLV L E++
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQLHEKD 193
>gi|357621873|gb|EHJ73547.1| cleavage and polyadenylation specific factor 5 [Danaus plexippus]
Length = 161
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 104/154 (67%), Gaps = 1/154 (0%)
Query: 81 MKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLT 140
M+ + K GMR SVE +LLV EH PH+LLLQ+G F KLPGG L PGE+EIEGLKR LT
Sbjct: 1 MREEFAKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIEGLKRLLT 60
Query: 141 SKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYF 200
LG + +W I + + WWRPNFE YPY PPHITKPKE K+LFLV L +R F
Sbjct: 61 ETLGRQD-GVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALF 119
Query: 201 AVPKNLKLLAVPLFELYDNVQIWASYFNHSSTAF 234
AVPKN KL+A PLFELYDN Q + + S +
Sbjct: 120 AVPKNYKLVAAPLFELYDNAQGYGPIISSLSQSL 153
>gi|196012174|ref|XP_002115950.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190581726|gb|EDV21802.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 174
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 68 MEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKP 127
M K SVA R RMK Y +GMR +VE +L+V EH PHILLLQ+G TF KLP L P
Sbjct: 1 MAKTGSVAARFQRMKEEYQTKGMRRTVEGVLIVHEHRLPHILLLQLGTTFFKLPSTELAP 60
Query: 128 GENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECK 187
GE+E+EGLKR L LG N + +W I + + +WRPNFE YPY P HITKPKE +
Sbjct: 61 GESEVEGLKRGLNEILGRND-GVEQEWLIEDLLCNYWRPNFEAAQYPYVPAHITKPKEQR 119
Query: 188 KLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
+LFLV L+E+ FAVPKN KL+A P+FELYDN +
Sbjct: 120 RLFLVQLAEKALFAVPKNYKLVAAPVFELYDNASGYG 156
>gi|194751375|ref|XP_001958002.1| GF10694 [Drosophila ananassae]
gi|190625284|gb|EDV40808.1| GF10694 [Drosophila ananassae]
Length = 204
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Query: 23 QRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMK 82
Q D+ N ++ + + +N YPL++YTFGTKEP EKD SV R RM+
Sbjct: 20 QGQADAANSNNNGTQKYAPNQALTINRTINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMR 79
Query: 83 VNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSK 142
+ + GMR SVE +LLV EH PH+LLLQ+G TF KLPGG L GE+E+EGLKR L+
Sbjct: 80 EEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVEGLKRLLSET 139
Query: 143 LGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSERE 198
LG + +W + + + WWRPNFE YPY PPHITKPKE K+LFLV L E++
Sbjct: 140 LGRQD-GVKQEWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLHEKD 194
>gi|21355361|ref|NP_648308.1| CG3689, isoform B [Drosophila melanogaster]
gi|194867856|ref|XP_001972161.1| GG15373 [Drosophila erecta]
gi|195326297|ref|XP_002029866.1| GM25145 [Drosophila sechellia]
gi|195490860|ref|XP_002093317.1| GE20835 [Drosophila yakuba]
gi|195589025|ref|XP_002084257.1| GD14179 [Drosophila simulans]
gi|17862918|gb|AAL39936.1| SD03330p [Drosophila melanogaster]
gi|23093817|gb|AAF50278.2| CG3689, isoform B [Drosophila melanogaster]
gi|190653944|gb|EDV51187.1| GG15373 [Drosophila erecta]
gi|194118809|gb|EDW40852.1| GM25145 [Drosophila sechellia]
gi|194179418|gb|EDW93029.1| GE20835 [Drosophila yakuba]
gi|194196266|gb|EDX09842.1| GD14179 [Drosophila simulans]
gi|220946996|gb|ACL86041.1| CG3689-PB [synthetic construct]
gi|220956536|gb|ACL90811.1| CG3689-PB [synthetic construct]
Length = 203
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 46 TINLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 105
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E+EGLKR L+ LG + +W + + + WWRPNFE
Sbjct: 106 LLQLGTTFFKLPGGELNAGEDEVEGLKRLLSETLGRQD-GVKQEWIVEDTIGNWWRPNFE 164
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSERE 198
YPY PPHITKPKE K+LFLV L E++
Sbjct: 165 PPQYPYIPPHITKPKEHKRLFLVQLHEKD 193
>gi|125980546|ref|XP_001354297.1| GA17613 [Drosophila pseudoobscura pseudoobscura]
gi|54642603|gb|EAL31350.1| GA17613 [Drosophila pseudoobscura pseudoobscura]
Length = 198
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN YPL++YTFGTKEP EKD SV R RM+ + + GMR SVE +LLV EH PH+L
Sbjct: 41 TVNLYPLTNYTFGTKEPLFEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVL 100
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L GE+E++GLKR L+ LG + +W + + + WWRPNFE
Sbjct: 101 LLQLGTTFFKLPGGELNAGEDEVDGLKRLLSETLGRQD-GVKQEWIVEDTIGNWWRPNFE 159
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSERE 198
YPY PPHITKPKE K+LFLV L E++
Sbjct: 160 PPQYPYIPPHITKPKEHKRLFLVQLHEKD 188
>gi|328716667|ref|XP_003246005.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform 2 [Acyrthosiphon pisum]
Length = 203
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 103/147 (70%), Gaps = 1/147 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPLS+Y FGTKEP EKD SV R RM+ + K GMR SVE +L+V +H PH+LL
Sbjct: 42 INLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLL 101
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ+G TF KLPGG L P E+E+EGLKR LT LG + P+W + + + WWRPNFE
Sbjct: 102 LQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLGRQD-GVQPEWTVEDTIGNWWRPNFEP 160
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSER 197
YPY PPHITKPKE K+LFLV L ++
Sbjct: 161 PTYPYIPPHITKPKEHKRLFLVQLPDK 187
>gi|361128593|gb|EHL00525.1| putative Cleavage and polyadenylation specificity factor subunit 5
[Glarea lozoyensis 74030]
Length = 218
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/149 (53%), Positives = 104/149 (69%), Gaps = 5/149 (3%)
Query: 77 RLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLK 136
RL R++ +Y+ GMR + E IL+ EHNHPHIL+LQI N F KLPG LKP + EI G K
Sbjct: 3 RLKRLEEHYINHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDEEISGFK 62
Query: 137 RKLTSKLGA-----NSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFL 191
+L +L + + +W+IG+ +A WWRPNFET MYP+ P H+T+PKECKKL+
Sbjct: 63 ERLNERLAPVGSQFSGEGVNEEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYF 122
Query: 192 VHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+ L ++ +VPKN+KLLAVPLFELYDN
Sbjct: 123 IQLPRQKVLSVPKNMKLLAVPLFELYDNT 151
>gi|324511146|gb|ADY44649.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 162
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
Query: 81 MKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLT 140
M+ Y K GMR SVE +LLV EH+ PH+LLLQIG TF KLPGG L PGE+EI+GLKR LT
Sbjct: 1 MREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEIDGLKRLLT 60
Query: 141 SKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYF 200
LG W I + + WWRPNF+ YPY P H+TKPKE KLFLV L ER F
Sbjct: 61 ETLGRQD-GTKDLWTIEDAIGNWWRPNFDPPRYPYIPAHVTKPKEQTKLFLVQLPERALF 119
Query: 201 AVPKNLKLLAVPLFELYDNVQIWA 224
AVPKN KL+A PLFELYDN +
Sbjct: 120 AVPKNYKLVAAPLFELYDNAAGYG 143
>gi|443690873|gb|ELT92890.1| hypothetical protein CAPTEDRAFT_121873, partial [Capitella teleta]
Length = 179
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 102/155 (65%), Gaps = 1/155 (0%)
Query: 43 SKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE 102
S + ++ YPL++YTFGTKE EKD SV +R RM+ + GMR + E +L+V E
Sbjct: 26 SHLTLDRTISLYPLTNYTFGTKEALYEKDASVQERFKRMRQEFADNGMRRTAEGVLIVHE 85
Query: 103 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAI 162
H PH+LLLQ+G TF KLPGG LK GE++ EGLKR LT LG A DW I + +
Sbjct: 86 HGLPHVLLLQLGTTFFKLPGGELKNGEDQTEGLKRLLTEMLGRQDQAPT-DWTIEDTIGN 144
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSER 197
WWRPNFE YPY P HITKPKE K+LFLV L E+
Sbjct: 145 WWRPNFEPPQYPYIPAHITKPKEHKRLFLVQLPEK 179
>gi|332376679|gb|AEE63479.1| unknown [Dendroctonus ponderosae]
Length = 234
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
++ YPL++Y FGTKEP E+D SV R RM+ + K GMR SVE +LLV EH PH+L
Sbjct: 56 IIKLYPLTNYIFGTKEPLFERDPSVPARFQRMRDEFEKIGMRRSVEGVLLVHEHGLPHVL 115
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR LT LG + +W + + + WWRPNFE
Sbjct: 116 LLQLGTTFFKLPGGELNPGEDEVEGLKRLLTETLGRLD-GVKQEWHVEDIIGNWWRPNFE 174
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSE 196
YPY P HITKPKE K+LFLV L +
Sbjct: 175 PPQYPYIPSHITKPKEHKRLFLVQLQD 201
>gi|210076035|ref|XP_505412.2| YALI0F14421p [Yarrowia lipolytica]
gi|199424960|emb|CAG78221.2| YALI0F14421p [Yarrowia lipolytica CLIB122]
Length = 250
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 111/177 (62%), Gaps = 10/177 (5%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YP S+Y F TK+ ++E+D SV R+ R+K Y + GM VE + L E P++
Sbjct: 27 TIRLYPSSNYVFATKDAQVERDVSVQARMQRLKSMYDESGMLRYVEGVFLCHEFGTPYVF 86
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEG-LKRKLTSKLGANSPALVPD------WQIGECVAI 162
LLQ+ N F KLPG L P E + EG L RKL +L SP D W++ +C+A
Sbjct: 87 LLQLPNNFFKLPGEYLDPDEEDEEGGLLRKLADRL---SPENGEDQENSKSWKVLDCLAQ 143
Query: 163 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
WWRPNFE MYP+ PPHI++PKECKK FL+ L E+ F VP N+ LAVPLFELYDN
Sbjct: 144 WWRPNFEVFMYPFLPPHISRPKECKKTFLISLPEKIAFFVPSNMTFLAVPLFELYDN 200
>gi|313238828|emb|CBY13829.1| unnamed protein product [Oikopleura dioica]
Length = 221
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 111/170 (65%), Gaps = 2/170 (1%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V+ Y L +Y FGTKE +++D DR R+K Y G R +V+A+++V+EH PH LL
Sbjct: 28 VDVYSLGNYNFGTKEEMIDQDGMNDDRFDRLKEEYAATGTRRTVQAVIVVEEHGLPHFLL 87
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQI-GECVAIWWRPNFE 169
LQ+ F KLPGG++ P E+EI GLKR LT L A DWQI VA WWRPNF
Sbjct: 88 LQLNPNFFKLPGGQILPHEDEIAGLKRILTQTLSVPGNA-KHDWQIEPTAVATWWRPNFS 146
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
+YP+ P H+ PKE +++FLV L+ + FA+P+N KL+A P+FE+YDN
Sbjct: 147 QNLYPFMPAHVKHPKERRQVFLVRLTGSQQFAIPRNFKLVAAPIFEVYDN 196
>gi|303279404|ref|XP_003058995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460155|gb|EEH57450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 10/185 (5%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
++ YP+++Y+FG K + KD + + R++ Y ++G R SV+A++LV +HN PH+L
Sbjct: 10 TMHVYPVTNYSFGQKAGRAAKDATPSATATRLREAYERDGPRRSVDAVMLVNQHNTPHVL 69
Query: 110 LLQIGN-------TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL--VPDWQIGECV 160
LLQ TF +LPGGRL+ GE E+EGL+RKL SKL + +L +W+ G+C+
Sbjct: 70 LLQSAGSGPGAPATF-RLPGGRLRRGEGELEGLQRKLHSKLSPSDASLGGAKEWETGDCL 128
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
A W RP + YPY P H T+PKE + ++ V L E+ FAVPK+LKLLAVPLFELY N
Sbjct: 129 ARWHRPAHDAHFYPYLPTHATRPKEARAVYAVQLPEKCKFAVPKSLKLLAVPLFELYGNE 188
Query: 221 QIWAS 225
+ + +
Sbjct: 189 KRYGA 193
>gi|125561458|gb|EAZ06906.1| hypothetical protein OsI_29145 [Oryza sativa Indica Group]
Length = 226
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVA----DRLARMKVNYMKEGMRTSVEAILLVQEHNHP 106
V YPL Y FG ++ + DR R+K N+ G+RTSV +LLV+ +HP
Sbjct: 23 VEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHP 82
Query: 107 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS------PALVPDWQIGECV 160
H+LLLQ+ N+ LPGGRL+PGE +++GLKRKL++KL +WQIGEC+
Sbjct: 83 HVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDKDGDGDDEWQIGECI 142
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+WWR F+ +PY P+ PKEC KLFL+ L F VP+N+KLLAVPL +++DN
Sbjct: 143 GMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDNA 202
Query: 221 QIWAS 225
Q++ S
Sbjct: 203 QVYGS 207
>gi|115476302|ref|NP_001061747.1| Os08g0398800 [Oryza sativa Japonica Group]
gi|37805958|dbj|BAC99373.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|37806023|dbj|BAC99435.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113623716|dbj|BAF23661.1| Os08g0398800 [Oryza sativa Japonica Group]
gi|125603321|gb|EAZ42646.1| hypothetical protein OsJ_27211 [Oryza sativa Japonica Group]
gi|215692402|dbj|BAG87822.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708715|dbj|BAG93984.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 226
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 114/185 (61%), Gaps = 10/185 (5%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVA----DRLARMKVNYMKEGMRTSVEAILLVQEHNHP 106
V YPL Y FG ++ + DR R+K N+ G+RTSV +LLV+ +HP
Sbjct: 23 VEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHP 82
Query: 107 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS------PALVPDWQIGECV 160
H+LLLQ+ N+ LPGGRL+PGE +++GLKRKL++KL +WQIGEC+
Sbjct: 83 HVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDEDGDGDDEWQIGECI 142
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+WWR F+ +PY P+ PKEC KLFL+ L F VP+N+KLLAVPL +++DN
Sbjct: 143 GMWWRSEFDAAPFPYLLPNARAPKECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDNA 202
Query: 221 QIWAS 225
Q++ S
Sbjct: 203 QVYGS 207
>gi|384492027|gb|EIE83223.1| hypothetical protein RO3G_07928 [Rhizopus delemar RA 99-880]
Length = 157
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 103/156 (66%), Gaps = 6/156 (3%)
Query: 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA 149
MR SVEA+L+V +HNHPH+L+ QI N+F KLPG L+PG E EGLK L +LG P
Sbjct: 1 MRRSVEAVLVVHQHNHPHVLMFQIANSFFKLPGHYLEPGVEETEGLKEILNKRLGPEDPL 60
Query: 150 LVP---DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNL 206
DW +GEC++ WWRPN+E MYPY P H+T PKE K L+++HL + VPKN+
Sbjct: 61 EWDSNIDWSVGECLSTWWRPNYENYMYPYIPAHVTNPKEKKSLYIIHLPPNKELFVPKNM 120
Query: 207 KLLAVPLFELYDNVQIWASYFNHSSTAFQIPVQYDY 242
KLLAVPLFELYDN A Y ST + +Y++
Sbjct: 121 KLLAVPLFELYDNS---ARYGAQLSTIAHLLSRYEF 153
>gi|58269392|ref|XP_571852.1| hypothetical protein CNG01010 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114299|ref|XP_774397.1| hypothetical protein CNBG3780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257032|gb|EAL19750.1| hypothetical protein CNBG3780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228088|gb|AAW44545.1| hypothetical protein CNG01010 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 229
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 122/216 (56%), Gaps = 35/216 (16%)
Query: 47 TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLV------ 100
T + +PL +Y F +E + E+D SV +RL R++ Y + G R SVEAI++V
Sbjct: 5 THDTIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVTVGNSI 64
Query: 101 -----------QEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN--- 146
Q H H+L+LQ+ N F KLPGG L P E++ EGL +L +LG
Sbjct: 65 SPSRALLNLPVQVHGFAHVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTT 124
Query: 147 ---------------SPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFL 191
+P DW++ +C+++W+RP+F+T +YPY P H++ PKECKKL+L
Sbjct: 125 LKGKDEDDLPRTVWLAPEGGRDWEVRDCLSVWYRPHFDTFLYPYAPAHVSYPKECKKLYL 184
Query: 192 VHLSEREYFAVPKNLKLLAVPLFELYDNVQIWASYF 227
V+L + FAVP N+KL A+P+FE YDN + F
Sbjct: 185 VNLPPNKTFAVPANMKLHAIPIFEFYDNAARYGPQF 220
>gi|154300626|ref|XP_001550728.1| hypothetical protein BC1G_10901 [Botryotinia fuckeliana B05.10]
Length = 204
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 5/136 (3%)
Query: 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA---- 145
MR + E IL+ EHNHPHIL+LQI N F KLPG LKP ++E+EG K++L +L
Sbjct: 1 MRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLKPEDDEVEGFKQRLNERLAPVGTQ 60
Query: 146 -NSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPK 204
+ + +W+IG+ +A WWRPNFET MYP+ P H+T+PKECKKL+ + L ++ +VPK
Sbjct: 61 FSGEGVNEEWEIGDTLAQWWRPNFETFMYPFIPAHVTRPKECKKLYYIQLPRQKVLSVPK 120
Query: 205 NLKLLAVPLFELYDNV 220
N+KLLAVPLFELYDN
Sbjct: 121 NMKLLAVPLFELYDNT 136
>gi|357147704|ref|XP_003574450.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 226
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
Query: 51 VNTYPLSSYTFGTKEPKM-EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
V YPLS Y FG ++P + + ADR R+K N+ G+RT V +LLV+ PH+L
Sbjct: 31 VEIYPLSRYYFGARDPASPARAETAADRALRLKANFAAHGLRTCVHGVLLVELLGRPHLL 90
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP-DWQIGECVAIWWRPNF 168
LLQ N+ LPGGRL+PGE +++GL+RKL+SKL A+ WQIGEC+ + WR +F
Sbjct: 91 LLQARNSSFLLPGGRLRPGEQDVQGLRRKLSSKLSADGHQQEDYGWQIGECIGMCWRSDF 150
Query: 169 ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
E+ +PY PP+ PKEC K+FL+ L F VP+NLKLLAVPL +++DN Q++
Sbjct: 151 ESGPFPYLPPNTRAPKECTKMFLIRLPMSRRFIVPRNLKLLAVPLSQIHDNAQVYG 206
>gi|115443272|ref|XP_001218443.1| hypothetical protein ATEG_09821 [Aspergillus terreus NIH2624]
gi|114188312|gb|EAU30012.1| hypothetical protein ATEG_09821 [Aspergillus terreus NIH2624]
Length = 195
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 104/153 (67%), Gaps = 5/153 (3%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L+ EHNHPH+L
Sbjct: 12 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQHGMRRTCEGVLVCHEHNHPHVL 71
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L + EI+G K++L +L + + DW+IG+ +A WW
Sbjct: 72 MLQIANAFFKLPGDYLHFEDEEIDGFKKRLNERLAPVGSQFSGEGVNEDWEIGDTIAQWW 131
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSER 197
RPNFET MYP+ P H+T+PKECKKL+ + L ++
Sbjct: 132 RPNFETFMYPFLPGHVTRPKECKKLYFIQLPKK 164
>gi|189210068|ref|XP_001941366.1| cleavage and polyadenylation specificity factor subunit 5
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977459|gb|EDU44085.1| cleavage and polyadenylation specificity factor subunit 5
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 261
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 110/180 (61%), Gaps = 19/180 (10%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ +PLS+YTFGTK+ + E+D SV RL R++ +Y + GMR + E IL
Sbjct: 28 TIRLFPLSNYTFGTKDGQPEEDPSVLARLKRLEEHYAEHGMRRTCEGIL----------- 76
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
I N F KLPG L+ ++EIEG K +L +L + +W +G+ +A WW
Sbjct: 77 ---IANAFFKLPGDYLRAEDDEIEGFKARLNERLAPVGTQFTGEGVNDEWVVGDTLAQWW 133
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN +
Sbjct: 134 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNTARYG 193
>gi|290983965|ref|XP_002674698.1| nudix motif 21-like protein [Naegleria gruberi]
gi|284088290|gb|EFC41954.1| nudix motif 21-like protein [Naegleria gruberi]
Length = 205
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 116/180 (64%), Gaps = 5/180 (2%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VV+ Y + + K P++EKD SV +RL R++ NY+ GM+ +VEA + V H HPHI+
Sbjct: 6 VVDIYDYTFIKWTKKNPQVEKDKSVPERLKRLENNYLTHGMKRTVEAAIAVNIHGHPHIM 65
Query: 110 LLQIGNT---FCKLPGGRLKPGENEIEGLKRKLTSKLGANSP-ALVPDWQIGECVAIWWR 165
LL+IGN+ F KLPGGR + E E E LKRKLT +L P ++P+W + V++W+R
Sbjct: 66 LLRIGNSQKGFHKLPGGRCRRDETEEECLKRKLTKRLAPEDPNEIMPEWIVHGVVSVWYR 125
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWAS 225
PNFE YPY P HITKPKE K ++LV + E A P+N + +P F+LY+N + + S
Sbjct: 126 PNFENSFYPYLPAHITKPKERKLIYLVTIPECT-IAYPRNYDFIPMPFFDLYENSKKFGS 184
>gi|259480797|tpe|CBF73767.1| TPA: cleavage and polyadenylation specific factor 5
(AFU_orthologue; AFUA_5G02030) [Aspergillus nidulans
FGSC A4]
Length = 275
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 110/180 (61%), Gaps = 11/180 (6%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E IL+ EHNHPH+L
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGILVCHEHNHPHVL 87
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++EIEG KR+L +L + + DW+IG+ +A WW
Sbjct: 88 MLQIANAFFKLPGDYLLHDDDEIEGFKRRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 147
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET + C ++ E +VPKN+KLLAVPLFELYDN Q +
Sbjct: 148 RPNFETFIKDQMSLVGHDMLMCLRV------AAEVLSVPKNMKLLAVPLFELYDNNQRYG 201
>gi|378726617|gb|EHY53076.1| autocrine motility factor receptor, variant [Exophiala dermatitidis
NIH/UT8656]
Length = 220
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Query: 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA 149
MR + E IL+ EHNHPH+L+LQI N F KLPG L +EIEG K +L +L +P
Sbjct: 1 MRRTCEGILVCHEHNHPHVLMLQIANAFFKLPGDYLPHDADEIEGFKMRLNERLAPTNPK 60
Query: 150 LVP-DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKL 208
+W+IG+C+A WWRPN ET +YP+ P H+++PKE KKL+L+HL + +VPKN+KL
Sbjct: 61 EGDTEWEIGDCLAQWWRPNHETFLYPFLPAHVSRPKELKKLYLIHLPPNKVLSVPKNMKL 120
Query: 209 LAVPLFELYDNV 220
LAVPLFELYDN
Sbjct: 121 LAVPLFELYDNT 132
>gi|67902116|ref|XP_681314.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4]
gi|40740477|gb|EAA59667.1| hypothetical protein AN8045.2 [Aspergillus nidulans FGSC A4]
Length = 297
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 109/180 (60%), Gaps = 11/180 (6%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y K GMR + E IL+ EHNHPH+L
Sbjct: 50 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEKHGMRRTCEGILVCHEHNHPHVL 109
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L ++EIEG KR+L +L + + DW+IG+ +A WW
Sbjct: 110 MLQIANAFFKLPGDYLLHDDDEIEGFKRRLNERLAPVGSQFSGEGVNEDWEIGDTLAQWW 169
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET + + + E +VPKN+KLLAVPLFELYDN Q +
Sbjct: 170 RPNFETFI------KDQMSLVGHDMLMCLRVAAEVLSVPKNMKLLAVPLFELYDNNQRYG 223
>gi|71012907|ref|XP_758540.1| hypothetical protein UM02393.1 [Ustilago maydis 521]
gi|46098198|gb|EAK83431.1| hypothetical protein UM02393.1 [Ustilago maydis 521]
Length = 258
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 123/238 (51%), Gaps = 61/238 (25%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + YP++++TF TK+ + E+D SVA RL R++ NY GMR +VEA+L+V EH HPH
Sbjct: 2 SQTLTLYPVTAFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALVP----------DW 154
+L+LQI N F KLPG LKPGE+E+EG+K +L +LG ++ + P DW
Sbjct: 62 VLMLQIANAFFKLPGDYLKPGEDEVEGIKARLDERLGPVESDPNSFGPNGEGRNKDDGDW 121
Query: 155 QIGECVAIWWRPNFETIM---------------------------YPYCPPHITKPKECK 187
+I +C+A WWRPNFET M Y P +T
Sbjct: 122 EIQDCLAQWWRPNFETFMTVSVCTTTCHQAERVQEALPRHHSTYQYVSTPSALTSQFPLS 181
Query: 188 KLFLVH---------------------LSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
++ H L E AVPKN+KLLAVPLFELYDN Q +
Sbjct: 182 EITHSHSTRPICLLADLHVLANPSAFSLRHAEVLAVPKNMKLLAVPLFELYDNSQRYG 239
>gi|225679184|gb|EEH17468.1| cleavage and polyadenylation specificity factor subunit 5
[Paracoccidioides brasiliensis Pb03]
Length = 262
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 111/181 (61%), Gaps = 21/181 (11%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +LL+
Sbjct: 27 PTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLLL-------- 78
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIW 163
PG L ++E+EG K +L +L + + +W+IG+ +A W
Sbjct: 79 --------IYGRPGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQW 130
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 131 WRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARY 190
Query: 224 A 224
Sbjct: 191 G 191
>gi|452825717|gb|EME32712.1| hypothetical protein Gasu_00780 [Galdieria sulphuraria]
Length = 226
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 111/177 (62%), Gaps = 6/177 (3%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
VN Y + +YTFGTK+ ++ RL K Y + G+R SV +LLV H HPH+L
Sbjct: 36 TVNLYKVDNYTFGTKQASQKQHERNPQRL---KEKYQERGLRHSVAGVLLVHHHRHPHVL 92
Query: 110 LLQIGNTFCK--LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 167
+LQ LPGGRL+PGE ++EGL RKL ++L + S W++G+ +A WW P+
Sbjct: 93 VLQRTKDAGSFWLPGGRLRPGEGDLEGLSRKLDNRLKSPSQERS-HWEVGDFLATWWYPD 151
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
F YPY PPH+TKPKE L+LV L E F+VP +L+LLA+PLF++++N + +
Sbjct: 152 FSDNRYPYIPPHVTKPKEKLNLYLVQLPESCAFSVPSDLQLLAIPLFQVFNNAEQYG 208
>gi|406698531|gb|EKD01766.1| hypothetical protein A1Q2_03829 [Trichosporon asahii var. asahii
CBS 8904]
Length = 237
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 116/190 (61%), Gaps = 7/190 (3%)
Query: 38 EREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAI 97
E + + V ++ +P+ +YTF + E+D+SVA+R+ R++ Y + GMR SV+A+
Sbjct: 4 ELKDPADTVAPQPIDLHPVQNYTFLNTSVQPEEDSSVAERMRRLQDQYDETGMRRSVDAV 63
Query: 98 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP---ALVPDW 154
++ +H P I QI N F KLPGG L P E+++EG+ R L LG S + P+W
Sbjct: 64 IVCHDHGVPCIFTFQIANDFFKLPGGYLDPSEDDVEGISRLLEEFLGTGSKQWRSDQPNW 123
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
+ +A+W+RPNF+ + P H++ PKEC+K+FLV ++ + VP N+KLLA+P+
Sbjct: 124 TVRSLLAVWYRPNFDG----FFPAHVSMPKECRKIFLVTMAPEQMLGVPLNMKLLAIPIH 179
Query: 215 ELYDNVQIWA 224
E YDN Q +
Sbjct: 180 EFYDNTQRYG 189
>gi|401886579|gb|EJT50606.1| hypothetical protein A1Q1_08158 [Trichosporon asahii var. asahii
CBS 2479]
Length = 237
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 116/190 (61%), Gaps = 7/190 (3%)
Query: 38 EREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAI 97
E + + V ++ +P+ +YTF + E+D+SVA+R+ R++ Y + GMR SV+A+
Sbjct: 4 ELKDPADTVAPQPIDLHPVQNYTFLNTSVQPEEDSSVAERMRRLQDQYDETGMRRSVDAV 63
Query: 98 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSP---ALVPDW 154
++ +H P I QI N F KLPGG L P E+++EG+ R L LG S + P+W
Sbjct: 64 IVCHDHGVPCIFTFQIANDFFKLPGGYLDPSEDDVEGISRLLEEFLGTGSKQWRSDQPNW 123
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
+ +A+W+RPNF+ + P H++ PKEC+K+FLV ++ + VP N+KLLA+P+
Sbjct: 124 TVRSLLAVWYRPNFDG----FFPAHVSMPKECRKIFLVTMTPEQMLGVPLNMKLLAIPIH 179
Query: 215 ELYDNVQIWA 224
E YDN Q +
Sbjct: 180 EFYDNTQRYG 189
>gi|444725613|gb|ELW66174.1| E3 ubiquitin-protein ligase AMFR [Tupaia chinensis]
Length = 861
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 91/139 (65%), Gaps = 8/139 (5%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+LLLQ+
Sbjct: 149 YPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQL 208
Query: 114 GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMY 173
G TF KLPGG L PGE+E+EGLKR +T LG L DW I +C+ WWRPNFE
Sbjct: 209 GTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVL-QDWVIDDCIGNWWRPNFE---- 263
Query: 174 PYCPPHITKPKECKKLFLV 192
PP + C L LV
Sbjct: 264 ---PPQVLVNTACCVLMLV 279
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 78 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 137
Query: 110 LLQIGNTFCKL 120
LLQ+G TF KL
Sbjct: 138 LLQLGTTFFKL 148
>gi|426382295|ref|XP_004057743.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 [Gorilla gorilla gorilla]
Length = 182
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 99/149 (66%), Gaps = 13/149 (8%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169
LLQ+G TF KLPGG L PGE+E+EGLKR +T LG ++ DW I +C+ WWRPNFE
Sbjct: 96 LLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQD-GVLQDWVIDDCIGNWWRPNFE 154
Query: 170 TIMYPYCPPHITKPKECKKLFLVHLSERE 198
PP ++ +L+L+ + E E
Sbjct: 155 -------PPQVS-----VQLYLLGILEAE 171
>gi|326483143|gb|EGE07153.1| cleavage and polyadenylation specificity factor subunit 5
[Trichophyton equinum CBS 127.97]
Length = 250
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 29/180 (16%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L + N+
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLQMLSSNY---- 83
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+EIEG K +L +L + DW++G+ +A WW
Sbjct: 84 --------------------DEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 123
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 124 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 183
>gi|326475545|gb|EGD99554.1| cleavage and polyadenylation specific factor 5 [Trichophyton
tonsurans CBS 112818]
Length = 250
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 29/180 (16%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L + N+
Sbjct: 28 TIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVLQMLSSNY---- 83
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+EIEG K +L +L + DW++G+ +A WW
Sbjct: 84 --------------------DEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWW 123
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIWA 224
RPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 124 RPNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNTARYG 183
>gi|4914406|emb|CAB43657.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
gi|7269881|emb|CAB79740.1| mRNA cleavage factor subunit-like protein [Arabidopsis thaliana]
Length = 185
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 111/205 (54%), Gaps = 41/205 (20%)
Query: 20 GEKQRPVDSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLA 79
GE+ R +D E + + +V +V+ YPLSSY FG+KE KD ++DR
Sbjct: 2 GEEARALDM----EEISDNTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDR-- 55
Query: 80 RMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL 139
HPH+LLLQ N+ KLPGGRL+PGE+ GL
Sbjct: 56 -------------------------HPHVLLLQYRNSIFKLPGGRLRPGES---GLVCCF 87
Query: 140 TSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREY 199
+ L N +GEC+ +WWRPNFET+MYP+ PP+I PKEC KLFLV L +
Sbjct: 88 LASLCIN-------IAVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQ 140
Query: 200 FAVPKNLKLLAVPLFELYDNVQIWA 224
F VPKN KLLAVPL +L++N + +
Sbjct: 141 FVVPKNFKLLAVPLCQLHENEKTYG 165
>gi|397498824|ref|XP_003820174.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 5-like [Pan paniscus]
Length = 258
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 129/221 (58%), Gaps = 16/221 (7%)
Query: 8 TRLLTKEQLRFKGEKQRPVDSLFLNRERERER------EKESKMVTSPVVNTYPLSSYTF 61
TR L RF + +P SL L E E ++ ++ ++ + YP+ +YTF
Sbjct: 4 TRPLEIYCCRFPKQLWKP--SLQLTTEGEPDQFSNKYIQQTKPLILEHTIKLYPIINYTF 61
Query: 62 GTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE--AILLVQEHNHPHILLLQIGNTFCK 119
GTKEP EKD+SV+ R +M+ K GMR+++E + L ++LLL +G TF K
Sbjct: 62 GTKEPLYEKDSSVSSRFQQMREELDKIGMRSNIEGDSDCLQALVWLLYVLLLLLGATFFK 121
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPH 179
LP G L PG+ E+EGLK +T L ++ ++ D ++G C+ WWRP YPY P +
Sbjct: 122 LPDGELSPGKGEVEGLKCLMTGIL-SHQDGVLKDARLGHCIGNWWRP-----XYPYIPVY 175
Query: 180 ITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
ITKPKE KKLFL L E+ FA+ KN KL+A PLFELY+N
Sbjct: 176 ITKPKEHKKLFLAQLQEKALFAISKNYKLIATPLFELYNNA 216
>gi|258571347|ref|XP_002544477.1| hypothetical protein UREG_03994 [Uncinocarpus reesii 1704]
gi|237904747|gb|EEP79148.1| hypothetical protein UREG_03994 [Uncinocarpus reesii 1704]
Length = 253
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 102/181 (56%), Gaps = 38/181 (20%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P + YPLS+YTFGTKE + E+D SV RL R++ +Y + GMR + E +L
Sbjct: 37 PTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLEEHYEQYGMRRTCEGVL---------- 86
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIW 163
+EG K +L +L + DW++G+ +A W
Sbjct: 87 -----------------------VEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQW 123
Query: 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQIW 223
WRPNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN +
Sbjct: 124 WRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNTARY 183
Query: 224 A 224
Sbjct: 184 G 184
>gi|321261305|ref|XP_003195372.1| hypothetical protein CGB_G5350W [Cryptococcus gattii WM276]
gi|317461845|gb|ADV23585.1| Hypothetical protein CGB_G5350W [Cryptococcus gattii WM276]
Length = 205
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 116/200 (58%), Gaps = 29/200 (14%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+ +PL +Y F +E + E+D SV +RL R++ Y + G R SVEAI++V+ +
Sbjct: 4 TIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYKESGTRRSVEAIMVVK-------V 56
Query: 110 LLQIGNTFCKL----PGGRLKPGENEIEGLKRKLTSKLGAN------------------S 147
+ +G++ L PGG L P E++ EGL +L +LG +
Sbjct: 57 GISLGSSRALLIPPFPGGHLDPSESDAEGLITRLNEQLGVPVTTLKGKSEDDLPRTVWLA 116
Query: 148 PALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLK 207
P DW++ +C++IW+RP+F+T +YPY P H++ PKECKK++LV+L + FAVP N+K
Sbjct: 117 PEGGRDWEVRDCLSIWYRPHFDTFLYPYAPAHVSYPKECKKIYLVNLPPNKTFAVPANMK 176
Query: 208 LLAVPLFELYDNVQIWASYF 227
L A+P+FE YDN + F
Sbjct: 177 LHAIPIFEFYDNAARYGPQF 196
>gi|89267099|emb|CAJ41963.1| hypothetical protein UHO_0263 [Ustilago hordei]
Length = 145
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 93/138 (67%), Gaps = 13/138 (9%)
Query: 48 SPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPH 107
S + +P++S+TF TK+ + E+D SVA RL R++ NY GMR +VEA+L+V EH HPH
Sbjct: 2 SQTLTLHPVTSFTFTTKDAQPEEDPSVAARLQRLQNNYEDLGMRRTVEAVLVVHEHGHPH 61
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG---ANSPALVPD----------W 154
+L+LQI N F KLPG LKPGE+E+EG+K +L +LG ++ + P+ W
Sbjct: 62 VLMLQIANAFFKLPGDYLKPGEDEVEGMKARLDERLGPVESDPNSFGPNGEGRNKDDGEW 121
Query: 155 QIGECVAIWWRPNFETIM 172
+I +C+A WWRPNFET M
Sbjct: 122 EIQDCLAQWWRPNFETFM 139
>gi|407926085|gb|EKG19056.1| hypothetical protein MPH_03746 [Macrophomina phaseolina MS6]
Length = 182
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 80/116 (68%), Gaps = 5/116 (4%)
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWW 164
+LQI N F KLPG L+P ++EI+G K +L +L + +WQIG+ +A WW
Sbjct: 1 MLQIANAFFKLPGDYLRPEDDEIDGFKARLNERLAPVGSQFTGEGVNDEWQIGDTLAQWW 60
Query: 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
RPNFET MYP+ P H+T+PKECKKL+ + L + +VPKN+KLLAVPLFELYDN
Sbjct: 61 RPNFETFMYPFIPAHVTRPKECKKLYFIQLPRSKVLSVPKNMKLLAVPLFELYDNT 116
>gi|412994192|emb|CCO14703.1| Cleavage and polyadenylation specificity factor subunit 5
[Bathycoccus prasinos]
Length = 345
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 101/184 (54%), Gaps = 35/184 (19%)
Query: 77 RLARMKVNYMKEG--MRTSVEAILLVQEHNHPHILLLQ---------------------- 112
RL R++ Y K G R SV + +V +H PH+LLLQ
Sbjct: 141 RLRRIREQYEKSGGIARRSVAGVCVVNQHGCPHVLLLQESTLPPGAQQRTADGKPASQWD 200
Query: 113 -IGNTFC------KLPGGRLKPGENEIEGLKRKLTSKLGA----NSPALVPDWQIGECVA 161
G F +LPGGRL+ GE EGLKRKL +KL A N L + I + ++
Sbjct: 201 RPGQHFSASTSTFRLPGGRLRAGEGTTEGLKRKLANKLAAPNESNEANLRASFDILDQLS 260
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
W+R FE MYPY PPH+TKPKE ++FLV L E+ YFAVPK KL+AVP+FELYDN +
Sbjct: 261 TWYRIGFEPQMYPYLPPHVTKPKETLEVFLVELPEKCYFAVPKTSKLVAVPIFELYDNAE 320
Query: 222 IWAS 225
+ +
Sbjct: 321 KFGA 324
>gi|405121948|gb|AFR96716.1| cleavage and polyadenylation specific factor 5 [Cryptococcus
neoformans var. grubii H99]
Length = 218
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 107/199 (53%), Gaps = 37/199 (18%)
Query: 47 TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 106
T + +PL +Y F +E + E+D SV +RL R++ Y + G R SVEAI++V H P
Sbjct: 5 THNTIEAFPLRNYLFIEREGQPEEDNSVTNRLKRLEDQYTESGTRRSVEAIMVVTVHGFP 64
Query: 107 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN------------------SP 148
H+L+LQ+ N F KLPGG L P E++ EGL +L +LG +P
Sbjct: 65 HVLVLQVANAFYKLPGGYLDPSESDAEGLITRLNEQLGVPVTTFKGKGEDDLPHTVWLAP 124
Query: 149 ALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKL 208
DW++ +C+++W+RP+F+T + L +LS E FAVP N+KL
Sbjct: 125 EEGRDWEVRDCLSVWYRPHFDTFI------------------LTYLS-VETFAVPANMKL 165
Query: 209 LAVPLFELYDNVQIWASYF 227
A+P+FE YDN + F
Sbjct: 166 HAIPVFEFYDNAARYGPQF 184
>gi|351703336|gb|EHB06255.1| Cleavage and polyadenylation specificity factor subunit 5
[Heterocephalus glaber]
Length = 209
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPL++YTFGTKEP EKD+SVA R RM+ + + GMR +VE +L+V EH PH+LL
Sbjct: 45 INLYPLTNYTFGTKEPLCEKDSSVAARFQRMREEFDRIGMRRAVEGVLIVHEHRLPHVLL 104
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECV 160
LQ+G TF KLPGG L PGE+E+EGLKR +T LG AL DW I +C
Sbjct: 105 LQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGAL-QDWVIDDCA 153
>gi|326431994|gb|EGD77564.1| hypothetical protein PTSG_08662 [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 99/169 (58%), Gaps = 1/169 (0%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
V+ +P S+Y + K E +++ ++L + + + G+ +++ ++LV++H HPH+LL
Sbjct: 8 VDIFPNSNYKILKDDSKTEPKSAMDEKLMALMHKFNETGLVETMQLVMLVEQHGHPHVLL 67
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170
LQ F LP +KP E E + R L + PAL ++I + A+WWRP+FE
Sbjct: 68 LQPHPKFSLLPHTEIKPDETSKETVHRILQEQFQVAEPALN-QFRIVDLAAVWWRPHFEQ 126
Query: 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
YPY PPH+TKPKE ++ LV + E F VP N + AVPL ELYDN
Sbjct: 127 PTYPYQPPHVTKPKERIQVVLVQMPESCDFVVPGNGNVRAVPLIELYDN 175
>gi|302501895|ref|XP_003012939.1| hypothetical protein ARB_00821 [Arthroderma benhamiae CBS 112371]
gi|291176500|gb|EFE32299.1| hypothetical protein ARB_00821 [Arthroderma benhamiae CBS 112371]
Length = 195
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 77/115 (66%), Gaps = 5/115 (4%)
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWWR 165
++ + F PG L+ ++EIEG K +L +L + DW++G+ +A WWR
Sbjct: 10 IEPADVFDNRPGDYLQHSDDEIEGFKARLNERLAPVGSQFTGEGVNEDWEVGDTLAQWWR 69
Query: 166 PNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
PNFET MYP+ P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN
Sbjct: 70 PNFETFMYPFLPGHVTRPKECKKLYFLQLPKKKVLSVPKNMKLLAVPLFELYDNT 124
>gi|225556923|gb|EEH05210.1| cleavage and polyadenylation specific factor 5 [Ajellomyces
capsulatus G186AR]
Length = 300
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 19/165 (11%)
Query: 61 FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKL 120
F + EP + + +A + + K R +E + ++P
Sbjct: 68 FLSPEPSSRRANQLHTEIASLDLEIRKREERDRIEITATALQSSNP-------------- 113
Query: 121 PGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWWRPNFETIMYPY 175
PG L ++E+EG K +L +L + + DW+IG+ +A WWRPNFET MYP+
Sbjct: 114 PGDYLHHDDDEVEGFKTRLNERLAPVGSQFSGEGVNDDWEIGDTLAQWWRPNFETFMYPF 173
Query: 176 CPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN
Sbjct: 174 LPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNT 218
>gi|226290895|gb|EEH46323.1| insulin-degrading enzyme [Paracoccidioides brasiliensis Pb18]
Length = 1374
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Query: 121 PGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQIGECVAIWWRPNFETIMYPY 175
PG L ++E+EG K +L +L + + +W+IG+ +A WWRPNFET MYP+
Sbjct: 1195 PGDYLHHDDDEVEGFKARLNERLAPVGSQFSGKGVNDEWEIGDTLAQWWRPNFETFMYPF 1254
Query: 176 CPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
P H+T+PKECKKL+ + L +++ +VPKN+KLLAVPLFELYDN
Sbjct: 1255 LPGHVTRPKECKKLYFIQLPKKKVLSVPKNMKLLAVPLFELYDNT 1299
>gi|312073725|ref|XP_003139649.1| pre-mRNA cleavage factor [Loa loa]
gi|307765185|gb|EFO24419.1| pre-mRNA cleavage factor [Loa loa]
Length = 228
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 38 EREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKV--NYMKEGMRTSVE 95
+RE+ S S V+ YPL++Y+ + + E + D +K+ Y +GM +V+
Sbjct: 24 KRERRS---MSSVIRLYPLTNYSVRSND--YEDPPRIFDYKQSLKLRQEYENDGMVRTVQ 78
Query: 96 AILLVQEHNHPHILLLQIG---NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP 152
+LL +++ H+LLL+ G KLP L GE+EI G+KR + LG A+
Sbjct: 79 GVLLGHQNSIIHVLLLKNGVGQMQSSKLPEVTLYHGEDEIAGMKRLMAEVLGFED-AVDA 137
Query: 153 DWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 212
QI A WWRPNFE +YPY P HITKPKE ++F+V L ++ F + KN L+A P
Sbjct: 138 VCQIQHIAAKWWRPNFEAPIYPYIPSHITKPKEMIRVFVVELPKKATFTIAKNNTLVAAP 197
Query: 213 LFELYDNVQIWA 224
+FE+YDNV +
Sbjct: 198 VFEIYDNVNGYG 209
>gi|239792840|dbj|BAH72714.1| ACYPI005495 [Acyrthosiphon pisum]
Length = 145
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 68/94 (72%)
Query: 51 VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 110
+N YPLS+Y FGTKEP EKD SV R RM+ + K GMR SVE +L+V +H PH+LL
Sbjct: 42 INLYPLSNYKFGTKEPLFEKDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLL 101
Query: 111 LQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
LQ+G TF KLPGG L P E+E+EGLKR LT LG
Sbjct: 102 LQLGTTFFKLPGGELNPAEDEVEGLKRLLTETLG 135
>gi|158286004|ref|XP_001687987.1| AGAP007242-PB [Anopheles gambiae str. PEST]
gi|157020261|gb|EDO64636.1| AGAP007242-PB [Anopheles gambiae str. PEST]
Length = 141
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 70/101 (69%)
Query: 40 EKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 99
+ M + +N YPL++YTFGTKEP EKD SV R RM+ + K GMR SVE +LL
Sbjct: 30 QTNQSMTLNRTINLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLL 89
Query: 100 VQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLT 140
V EH PH+LLLQ+G TF KLPGG L GE+E++GLKR LT
Sbjct: 90 VHEHGLPHVLLLQLGTTFFKLPGGELSAGEDEVDGLKRLLT 130
>gi|402587186|gb|EJW81121.1| hypothetical protein WUBG_07970 [Wuchereria bancrofti]
Length = 258
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 104/190 (54%), Gaps = 8/190 (4%)
Query: 40 EKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKV--NYMKEGMRTSVEAI 97
EK + S V+ YPL++Y+ + E + D +K+ Y GM +V+ +
Sbjct: 15 EKNERRCMSNVIRLYPLTNYSVQNND--YEDPPRIFDYKQSLKLRQQYENNGMIRTVQGV 72
Query: 98 LLVQEHNHPHILLLQ--IGNT-FCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDW 154
LL +++ H+LLL+ IG KLP L E+EI+G+KR + +G A
Sbjct: 73 LLGHQNSIIHVLLLKNGIGQIQSSKLPEVTLYNSEDEIDGMKRLMAEVMGFKDTAEAV-C 131
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
QI A WWRPNFE +YPY P HITKPKE K+F+V L E+ F + KN L+A P+F
Sbjct: 132 QIQHVAAKWWRPNFEASIYPYIPSHITKPKEMIKVFVVELPEQTTFTIAKNNALVAAPVF 191
Query: 215 ELYDNVQIWA 224
E+Y+N+ +
Sbjct: 192 EIYNNISNYG 201
>gi|432102773|gb|ELK30249.1| Cleavage and polyadenylation specificity factor subunit 5 [Myotis
davidii]
Length = 325
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP E D+SVA R M+ + K GMR ++E +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYE-DSSVAARFQCMREEFDKIGMRRTIEGVLIVHEHRLPHVL 94
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECV 160
LLQ+G TF K PG L PGE+E+EGLKR +T LG ++ DW I +C+
Sbjct: 95 LLQLGTTFFKRPGDELNPGEDEVEGLKRLMTEILGRQD-GVLQDWAIDDCI 144
>gi|170589621|ref|XP_001899572.1| pre-mrna cleavage factor [Brugia malayi]
gi|158593785|gb|EDP32380.1| pre-mrna cleavage factor, putative [Brugia malayi]
Length = 220
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 4/188 (2%)
Query: 40 EKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 99
EK + S V+ YPL++Y+ + + + +++ Y GM +V+ +LL
Sbjct: 15 EKNERRCMSSVIRLYPLTNYSVQNNDYEDPPQIFDYKQSLKLRQQYENNGMIRTVQGVLL 74
Query: 100 VQEHNHPHILLLQIGN---TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQI 156
+++ H+LLL+ G KLP L E+EI+G+KR + +G A QI
Sbjct: 75 GHQNSIIHVLLLKNGVGQIQSSKLPEVTLYNSEDEIDGMKRLMAEVMGFKDTAEAV-CQI 133
Query: 157 GECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFEL 216
A WWRPNFE +YPY P HITKPKE K+F+V L ++ F + KN L+A P+FE+
Sbjct: 134 QHVAAKWWRPNFEESIYPYIPSHITKPKEMIKVFVVELPKQTTFTIAKNNALIAAPVFEI 193
Query: 217 YDNVQIWA 224
Y+N+ +
Sbjct: 194 YNNISNYG 201
>gi|226487326|emb|CAX75528.1| Cleavage and polyadenylation specificity factor 5 [Schistosoma
japonicum]
Length = 139
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 47 TSPVVNT---YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH 103
++PV T YPL SY+FGTKEP E+D SV R R++ ++ K GMR SVE ILLV EH
Sbjct: 18 STPVAKTITLYPLKSYSFGTKEPNYERDRSVPARFQRLQEDFEKYGMRRSVEGILLVHEH 77
Query: 104 NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLT 140
N PH+LLLQ+G TF KLPGG L PGE EIEGLKR L+
Sbjct: 78 NLPHVLLLQLG-TFFKLPGGELHPGEEEIEGLKRLLS 113
>gi|302680302|ref|XP_003029833.1| hypothetical protein SCHCODRAFT_82994 [Schizophyllum commune H4-8]
gi|300103523|gb|EFI94930.1| hypothetical protein SCHCODRAFT_82994 [Schizophyllum commune H4-8]
Length = 118
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 77/135 (57%), Gaps = 35/135 (25%)
Query: 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPA 149
MR + E +L+V +H HPHIL+LQ N F KLPG LK GE+E++GLKR+L
Sbjct: 1 MRRTDEGVLVVHDHGHPHILMLQTANAFFKLPGDYLKSGEDEVDGLKRRLN--------- 51
Query: 150 LVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLL 209
EC+A PP+ +K CKKLFLV ++E+ AV KN+KLL
Sbjct: 52 --------ECLA---------------PPNASK---CKKLFLVQMTEKYVLAVAKNMKLL 85
Query: 210 AVPLFELYDNVQIWA 224
A+PLFELYDN +
Sbjct: 86 AIPLFELYDNAAKYG 100
>gi|402576636|gb|EJW70594.1| pre-mRNA cleavage factor [Wuchereria bancrofti]
Length = 92
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 81 MKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLT 140
M+ Y K GMR SVE +LLV EH+ PH+LLLQIG TF KLPGG L PGE+E+EGLKR LT
Sbjct: 1 MREEYEKIGMRRSVEGVLLVHEHSLPHVLLLQIGTTFFKLPGGELNPGEDEVEGLKRLLT 60
Query: 141 SKLGANSPALVPDWQIGECVAIWWRPNFE 169
LG A W I + + WWRPNF+
Sbjct: 61 ETLGRQDGA-KDLWTIEDVIGNWWRPNFD 88
>gi|62318512|dbj|BAD94845.1| hypothetical protein [Arabidopsis thaliana]
Length = 56
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 52/56 (92%)
Query: 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLV 100
M S VVNTYPLS+Y+FGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVE ILLV
Sbjct: 1 MAMSQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLV 56
>gi|449703267|gb|EMD43749.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica KU27]
Length = 217
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 114/201 (56%), Gaps = 11/201 (5%)
Query: 31 LNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEK-DTSVADRLARMKVNYMKEG 89
+ E +++E+ P++ YP+ +Y KE + + ++ ++K++ K
Sbjct: 1 MQEEELKKKERNEHRNYPPLLKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNH 60
Query: 90 M-RTSVEAILLVQEHNHPHILLLQIGNTF-----CKLPGGRLKPGENE-IEGLKRKLTSK 142
+ RTSV ++LV ++N PH+L+LQ + L GGRLK GE++ +EGLKRKL K
Sbjct: 61 VPRTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKK 120
Query: 143 LGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAV 202
+ S + ++IGE + ++R ++ +YPY P H+++ KE ++++HL E+ F +
Sbjct: 121 M---SMEYITHYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFKI 177
Query: 203 PKNLKLLAVPLFELYDNVQIW 223
KL ++PLF L++N + +
Sbjct: 178 FDTDKLSSIPLFALHNNFEKY 198
>gi|167386157|ref|XP_001737641.1| Cleavage and polyadenylation specificity factor subunit [Entamoeba
dispar SAW760]
gi|165899476|gb|EDR26062.1| Cleavage and polyadenylation specificity factor subunit, putative
[Entamoeba dispar SAW760]
Length = 240
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEK-DTSVADRLARMKVNYMKEGM-RTSVEAILLVQEHNHP 106
P++ YP+ +Y KE + + ++ ++K++ K + RTSV ++LV ++N P
Sbjct: 42 PLLKIYPIENYQIDKKEKLDKLKQQTFGYQMEQLKISVEKNHVPRTSVYGVILVHKNNFP 101
Query: 107 HILLLQIGNTF-----CKLPGGRLKPGENE-IEGLKRKLTSKLGANSPALVPDWQIGECV 160
H+L+LQ + L GGRLK GE++ +EGLKRKL K+ S + ++IGE +
Sbjct: 102 HLLVLQSNLSMNLKDEIHLVGGRLKIGEDDPVEGLKRKLRKKM---SMEYITHYEIGELL 158
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
++R ++ +YPY P HI++ KE ++++HL E+ F + KL ++PLF L++N
Sbjct: 159 GTFYRIGYDKNLYPYIPVHISQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNNF 218
Query: 221 QIW 223
+ +
Sbjct: 219 EKY 221
>gi|407041326|gb|EKE40665.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
nuttalli P19]
Length = 247
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 114/201 (56%), Gaps = 11/201 (5%)
Query: 31 LNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEK-DTSVADRLARMKVNYMKEG 89
+ E +++E+ P++ YP+ +Y KE + + ++ ++K++ K
Sbjct: 31 IQEEEIKKKERNEHRNYPPLLKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNH 90
Query: 90 M-RTSVEAILLVQEHNHPHILLLQIGNTF-----CKLPGGRLKPGENE-IEGLKRKLTSK 142
+ RTSV ++LV ++N PH+L+LQ + L GGRLK GE++ +EGLKRKL K
Sbjct: 91 VPRTSVYGVILVHKNNFPHLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKK 150
Query: 143 LGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAV 202
+ S + ++IGE + ++R ++ +YPY P H+++ KE ++++HL E+ F +
Sbjct: 151 M---SMEYITHYEIGELLGTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFKI 207
Query: 203 PKNLKLLAVPLFELYDNVQIW 223
KL ++PLF L++N + +
Sbjct: 208 FDTDKLSSIPLFALHNNFEKY 228
>gi|67479111|ref|XP_654937.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56472032|gb|EAL49551.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 255
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEK-DTSVADRLARMKVNYMKEGM-RTSVEAILLVQEHNHP 106
P++ YP+ +Y KE + + ++ ++K++ K + RTSV ++LV ++N P
Sbjct: 57 PLLKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNHVPRTSVYGVILVHKNNFP 116
Query: 107 HILLLQIGNTF-----CKLPGGRLKPGENE-IEGLKRKLTSKLGANSPALVPDWQIGECV 160
H+L+LQ + L GGRLK GE++ +EGLKRKL K+ S + ++IGE +
Sbjct: 117 HLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKKM---SMEYITHYEIGELL 173
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
++R ++ +YPY P H+++ KE ++++HL E+ F + KL ++PLF L++N
Sbjct: 174 GTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNNF 233
Query: 221 QIW 223
+ +
Sbjct: 234 EKY 236
>gi|183232663|ref|XP_001913750.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica
HM-1:IMSS]
gi|32967089|gb|AAP92383.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica]
gi|169801938|gb|EDS89478.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 236
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 107/183 (58%), Gaps = 11/183 (6%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEK-DTSVADRLARMKVNYMKEGM-RTSVEAILLVQEHNHP 106
P++ YP+ +Y KE + + ++ ++K++ K + RTSV ++LV ++N P
Sbjct: 38 PLLKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNHVPRTSVYGVILVHKNNFP 97
Query: 107 HILLLQIGNTF-----CKLPGGRLKPGENE-IEGLKRKLTSKLGANSPALVPDWQIGECV 160
H+L+LQ + L GGRLK GE++ +EGLKRKL K+ S + ++IGE +
Sbjct: 98 HLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKKM---SMEYITHYEIGELL 154
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
++R ++ +YPY P H+++ KE ++++HL E+ F + KL ++PLF L++N
Sbjct: 155 GTFYRIEYDKNLYPYIPVHVSQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNNF 214
Query: 221 QIW 223
+ +
Sbjct: 215 EKY 217
>gi|224142912|ref|XP_002324776.1| predicted protein [Populus trichocarpa]
gi|222866210|gb|EEF03341.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Query: 129 ENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKK 188
+ I+GLKRKL+S + + W++G+C+ +WWR +FET++ PY P ++ PKEC K
Sbjct: 26 SDNIDGLKRKLSSSVNGDG---TDHWEVGDCLGMWWRSDFETMLLPYLPHNVKVPKECMK 82
Query: 189 LFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
L+LV E F VPKNLKLLAVPL ++++N
Sbjct: 83 LYLVRFPESRKFIVPKNLKLLAVPLCQVHEN 113
>gi|154421279|ref|XP_001583653.1| hydrolase, NUDIX family protein [Trichomonas vaginalis G3]
gi|121917896|gb|EAY22667.1| hydrolase, NUDIX family protein [Trichomonas vaginalis G3]
Length = 191
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
+ LS+Y FG E + E++ + DR+ ++K + EG SV I+L EHN ILLL+
Sbjct: 6 HKLSNYRFGASEDEEEEEKAHTDRMEKIKEIFAVEGTVKSVRCIILAHEHNITTILLLKN 65
Query: 114 GNTFC-KLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIM 172
N ++PGG ++ GE + +KR LT K + ++ IG+ VA W+RP F +
Sbjct: 66 KNKKKLQMPGGIVRTGEEDEAAIKRILTKKF----RIVEGEFDIGDHVATWYRPQFSEYL 121
Query: 173 YPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
YPY P HIT+ KE +K ++V L E+ +F + +L A+ ++++NV+
Sbjct: 122 YPYLPAHITQAKEIEKWYIVMLPEKAHFNIQSKNELSALQFIQIHNNVE 170
>gi|71408035|ref|XP_806446.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|50363269|gb|AAT75337.1| cleavage factor I 25 kDa [Trypanosoma cruzi]
gi|70870196|gb|EAN84595.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 292
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 49/193 (25%)
Query: 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNT------------------F 117
++L +K +E SVE +LLV H+HPH+LLL+ NT
Sbjct: 76 EKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHSRVLPATNTNNLAV 135
Query: 118 CKLPGGRLKPGENEIEGLKRKLTSKL-------------------------GANSPALVP 152
LPGGR + GE E L RKL L ++S A+ P
Sbjct: 136 FSLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESESSEMVVEVGASHSLAVAP 195
Query: 153 ---DWQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFAVP-KNL 206
+++GE + W+RP+F+ MYPY P H+ + KE + +FLVHL + V +++
Sbjct: 196 SSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHLPPQMLLTVAQRDV 255
Query: 207 KLLAVPLFELYDN 219
+L+A PLF+LY+N
Sbjct: 256 ELVAAPLFDLYEN 268
>gi|407853607|gb|EKG06513.1| hypothetical protein TCSYLVIO_002377 [Trypanosoma cruzi]
Length = 270
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 49/193 (25%)
Query: 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCK---------------- 119
++L +K +E SVE +LLV H+HPH+LLL+ NT
Sbjct: 54 EKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHSRVLPATNTNNLAV 113
Query: 120 --LPGGRLKPGENEIEGLKRKLTSKL-------------------------GANSPALVP 152
LPGGR + GE E L RKL L +++ A+ P
Sbjct: 114 FFLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESESSETVVEVGASHNLAVAP 173
Query: 153 ---DWQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFAVP-KNL 206
+++GE + W+RP+F+ MYPY P H+ + KE + +FLVHL + V +++
Sbjct: 174 SSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHLPPQMLLTVAQRDV 233
Query: 207 KLLAVPLFELYDN 219
+L+A PLF+LY+N
Sbjct: 234 ELVAAPLFDLYEN 246
>gi|71662854|ref|XP_818427.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883679|gb|EAN96576.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 292
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 49/193 (25%)
Query: 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCK---------------- 119
++L +K +E SVE +LLV H+HPH+LLL+ NT
Sbjct: 76 EKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHSRVLPATNTNNLAV 135
Query: 120 --LPGGRLKPGENEIEGLKRKLTSKL-------------------------GANSPALVP 152
LPGGR + GE E L RKL L +++ A+ P
Sbjct: 136 FFLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAENESSETVVEVGASHNLAVAP 195
Query: 153 ---DWQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFAVP-KNL 206
+++GE + W+RP+F+ MYPY P H+ + KE + +FLVHL + V +++
Sbjct: 196 SSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHLPPQMLLTVAQRDV 255
Query: 207 KLLAVPLFELYDN 219
+L+A PLF+LY+N
Sbjct: 256 ELVAAPLFDLYEN 268
>gi|440299573|gb|ELP92125.1| Cleavage and polyadenylation specificity factor subunit, putative
[Entamoeba invadens IP1]
Length = 262
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 101/183 (55%), Gaps = 21/183 (11%)
Query: 54 YPLSSYTFGTKEPKMEKDTS-VADRLARMKVNYMKEGM------RTSVEAILLVQEHNHP 106
YP+++Y T + DTS + + + +++ ++E + R V ++LV P
Sbjct: 69 YPITNYKIIT-----QPDTSKIKLQSSHHRMDVLREFVEKNHVSRVCVYGVILVNNMGFP 123
Query: 107 HILLLQ-----IGNTFCKLPGGRLKPGENE-IEGLKRKLTSKLGANSPALVPDWQIGECV 160
+L LQ +L GG+LK GE++ +EGLKRK+ KL + IGE +
Sbjct: 124 CLLTLQPSKGSTATAESQLIGGKLKVGEDDPVEGLKRKMRDKLNLEYGI---HYDIGELL 180
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+++R N++ +YPY PPH+T PKE K++++H+ E F V ++ L ++PL++L +N
Sbjct: 181 GVFYRINYDKYLYPYIPPHVTLPKEIIKVYMIHMKESCKFGVLDSVSLNSLPLYDLLNNT 240
Query: 221 QIW 223
++
Sbjct: 241 DLF 243
>gi|221052282|ref|XP_002257717.1| mrna cleavage factor-like protein [Plasmodium knowlesi strain H]
gi|193807548|emb|CAQ38053.1| mrna cleavage factor-like protein, putative [Plasmodium knowlesi
strain H]
Length = 257
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 14/178 (7%)
Query: 53 TYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ 112
YP ++Y F E K D++ + Y ++G+R S AI+L + +PH+LLLQ
Sbjct: 43 VYPQANYEFNIVEKLKSKFIMDTDKIKKRINAYNQDGIRNSALAIILCHRYEYPHLLLLQ 102
Query: 113 -IGNTFCKLPGGRLKPGENEIEGLKRKL-------------TSKLGANSPALVPDWQIGE 158
I + L G+ K E E LK+KL TS +IGE
Sbjct: 103 NIESQTYHLLSGKYKSWEKPREVLKKKLQKYVNQIRDMHFGTSHFNTEEKETEDPIEIGE 162
Query: 159 CVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFEL 216
+ WW+ F ++ PY P HIT+PKE +L+ V L+ R F +P L A+PLF+L
Sbjct: 163 FLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPLFDL 220
>gi|124505817|ref|XP_001351022.1| mRNA cleavage factor-like protein, putative [Plasmodium falciparum
3D7]
gi|23510665|emb|CAD49050.1| mRNA cleavage factor-like protein, putative [Plasmodium falciparum
3D7]
Length = 232
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 13/175 (7%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVN-YMKEGMRTSVEAILLVQEHNHPHILLLQ 112
YP S+Y F E K++ + + ++N Y K G+R SV AI+L + +PH+LLLQ
Sbjct: 29 YPQSNYEFNIDE-KLKNKFIIDKEKCKKRINAYNKNGIRNSVLAIILCHRYEYPHLLLLQ 87
Query: 113 -IGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-----NSPALVPDWQ-----IGECVA 161
I + L G+ K E E LK+KL + +PA + Q IG+ +
Sbjct: 88 HIESQKYYLLNGKYKTWEKPKEVLKKKLQKYINKIKDIHFTPAQINKEQEETVEIGDFLG 147
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFEL 216
WWR F ++ PY P HI++PKE +L+ V LS + F +P L A+PLF+L
Sbjct: 148 EWWRTQFNSVFLPYLPAHISRPKEYIRLYQVILSPKCIFHLPPGFTLKAIPLFDL 202
>gi|407420837|gb|EKF38695.1| hypothetical protein MOQ_001095 [Trypanosoma cruzi marinkellei]
Length = 292
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 49/193 (25%)
Query: 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCK---------------- 119
++L +K +E SVE +LLV H+HPH+LLL+ NT
Sbjct: 76 EKLMSLKARCREEQCVHSVEGVLLVHVHDHPHVLLLRHANTKASAHSRVLPATNTNNLAV 135
Query: 120 --LPGGRLKPGENEIEGLKRKLTSKL-------------------------GANSPALVP 152
LPGGR + GE E L RKL L +++ A+ P
Sbjct: 136 FFLPGGRCRKGEPEEICLLRKLGRDLLNEKKSLMASRTAESEPSETVVEVGASHNLAVAP 195
Query: 153 ---DWQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFAVP-KNL 206
+++GE + W+RP+F+ MYPY P H+ + KE + +FLVHL + V +++
Sbjct: 196 SSSSFRVGEALGRWYRPHFDPFMYPYVPAHVAESDVKEVRTVFLVHLPPQMLLTVAQRDV 255
Query: 207 KLLAVPLFELYDN 219
+L+A PLF+LY+N
Sbjct: 256 ELVAAPLFDLYEN 268
>gi|70948254|ref|XP_743664.1| mRNA cleavage factor-like protein [Plasmodium chabaudi chabaudi]
gi|56523269|emb|CAH76421.1| mRNA cleavage factor-like protein, putative [Plasmodium chabaudi
chabaudi]
Length = 241
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVN-YMKEGMRTSVEAILLVQEHNHPHILLLQ 112
YP SY F E K++K + + ++N Y K G+R +V AILL H +PH+LLLQ
Sbjct: 29 YPQDSYEFNIDE-KLKKKFIIDTEKYKKRINSYNKNGIRNTVIAILLCHRHEYPHLLLLQ 87
Query: 113 -IGNTFCKLPGGRLKPGENEIEGLKRKL-------------TSKLGAN---SPALVPD-- 153
+ GG+ E + LK+KL +KL N + A D
Sbjct: 88 NLATQEYFFLGGKYNSWEKPRDVLKKKLQKYINKIKDIHFAVNKLNINEQTADAKNKDEL 147
Query: 154 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 213
+ +GE + WWR ++++ Y P HIT+PKEC +L+ V + + F +P L A+PL
Sbjct: 148 FDVGEFLGEWWRTQYDSVYLSYLPAHITRPKECARLYQVTIMPKCIFHLPPGFTLKAIPL 207
Query: 214 FEL 216
F+L
Sbjct: 208 FDL 210
>gi|340054509|emb|CCC48807.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 290
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 49/199 (24%)
Query: 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ----------------IGNTFC- 118
++L +K ++ SVE +LLV HNHPHILLL+ + +T
Sbjct: 74 EKLMSLKARCREQQCVHSVEGVLLVHAHNHPHILLLRHNPKASSRSRVQPATNVNSTMVF 133
Query: 119 KLPGGRLKPGENEIEGLKRKLT------SKLGANSPAL-------VPD------------ 153
+LPGGR + GE E L RKL SK + A V D
Sbjct: 134 RLPGGRCRSGELEESCLLRKLGRDLFNESKHAGRAQAAEEERSETVVDVAGSRGSAGTST 193
Query: 154 ----WQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHL-SEREYFAVPKNL 206
+++GE +A W+RP+F+ +MYPY PPHI++ +E + +FLVHL
Sbjct: 194 SASSFRVGEVLARWYRPHFDPLMYPYIPPHISENDVREVRTIFLVHLPPHMLLTTTETEE 253
Query: 207 KLLAVPLFELYDNVQIWAS 225
+L+AVPLF+LYDN + S
Sbjct: 254 ELVAVPLFDLYDNTAKYGS 272
>gi|156095009|ref|XP_001613540.1| mRNA cleavage factor-like protein [Plasmodium vivax Sal-1]
gi|148802414|gb|EDL43813.1| mRNA cleavage factor-like protein, putative [Plasmodium vivax]
Length = 267
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ- 112
YP ++Y F E K AD+ + Y + G+R+S AI+L + +PH+LLLQ
Sbjct: 60 YPQANYEFNIDEKLKSKFVMDADKCKKRINTYNQNGIRSSALAIILCHRYEYPHLLLLQN 119
Query: 113 IGNTFCKLPGGRLKPGENEIEGLKRKL-------------TSKLGANSPALVPDWQIGEC 159
+ + L G+ + E + LK+KL TS A +IGE
Sbjct: 120 VESQTYYLLSGKYRSWEKPRDVLKKKLQKYVNQIRDMHFATSHFNAEQKESEDPIEIGEF 179
Query: 160 VAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFEL 216
+ WW+ F ++ PY P HIT+PKE +L+ V L+ R F +P L A+PLF+L
Sbjct: 180 LGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPLFDL 236
>gi|68068277|ref|XP_676048.1| mRNA cleavage factor-like protein [Plasmodium berghei strain ANKA]
gi|56495563|emb|CAH97001.1| mRNA cleavage factor-like protein, putative [Plasmodium berghei]
Length = 241
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVN-YMKEGMRTSVEAILLVQEHNHPHILLLQ 112
YP SY F E K++K + + ++N Y K G+R +V AILL H +PH+LLLQ
Sbjct: 29 YPQDSYEFNIDE-KLKKKFIIDTEKYKKRINSYNKNGIRNTVIAILLCHRHEYPHLLLLQ 87
Query: 113 -IGNTFCKLPGGRLKPGENEIEGLKRKL-------------TSKLGANSP---ALVPD-- 153
+ GG+ E + LK+KL +KL N A D
Sbjct: 88 NLSTQEYYFLGGKYNSWEKPGDVLKKKLQKYINKIQDIHFSVNKLNINDQTGNAKNKDEI 147
Query: 154 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 213
+ +GE + WW+ + ++ Y P H+T+PKEC KL+ V + ++ F +P L A+PL
Sbjct: 148 FDVGEFLGEWWKTQYASVYLSYLPAHVTRPKECAKLYQVTIPDKCIFHLPPGFTLKAIPL 207
Query: 214 FEL 216
F+L
Sbjct: 208 FDL 210
>gi|324524942|gb|ADY48486.1| Cleavage and polyadenylation specificity factor subunit 5 [Ascaris
suum]
Length = 93
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 36 EREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE 95
E+ERE + +V YPL++Y FG KE + E+D SV DR RM+ + K GMR SV+
Sbjct: 2 EKERE-----LNRKIVKLYPLTNYVFGKKEAQHERDLSVHDRFDRMRNEFHKMGMRRSVD 56
Query: 96 AILLVQEHNHPHILLLQIGNTFCKLP 121
A++LV EH+ PH+LLL++G F KLP
Sbjct: 57 AVILVHEHSLPHVLLLRVGQNFFKLP 82
>gi|146089416|ref|XP_001470377.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070410|emb|CAM68748.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 271
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 50/202 (24%)
Query: 73 SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL-QI---------------GNT 116
S ++L +K +E SVE +LLV H HPHILL+ QI NT
Sbjct: 48 SAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTHDADGMRTVPPSNT 107
Query: 117 FC----KLPGGRLKPGENEIEGLKRKLTSKL--GANSPALVPD----------------- 153
+LPGGR + GE E L RKL L A +PA +
Sbjct: 108 NAEATYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTH 167
Query: 154 --------WQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFA-V 202
+++GE +A W+RP+F MYPY P HI +E + ++LVHL YF+ V
Sbjct: 168 NASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRAIYLVHLEPTVYFSMV 227
Query: 203 PKNLKLLAVPLFELYDNVQIWA 224
+ ++L+A PLF+LY+N +
Sbjct: 228 QEGVELVAAPLFDLYENASKYG 249
>gi|398016859|ref|XP_003861617.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499844|emb|CBZ34917.1| hypothetical protein, conserved [Leishmania donovani]
Length = 271
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 50/202 (24%)
Query: 73 SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL-QI---------------GNT 116
S ++L +K +E SVE +LLV H HPHILL+ QI NT
Sbjct: 48 SAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRDADGMRTVPPSNT 107
Query: 117 FC----KLPGGRLKPGENEIEGLKRKLTSKL--GANSPALVPD----------------- 153
+LPGGR + GE E L RKL L A +PA +
Sbjct: 108 NAEATYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKAPAGAAEVASAGNSDTVVDVGMTH 167
Query: 154 --------WQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFA-V 202
+++GE +A W+RP+F MYPY P HI +E + ++LVHL YF+ V
Sbjct: 168 NASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFSMV 227
Query: 203 PKNLKLLAVPLFELYDNVQIWA 224
+ ++L+A PLF+LY+N +
Sbjct: 228 QEGVELVAAPLFDLYENASKYG 249
>gi|157870973|ref|XP_001684036.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127104|emb|CAJ04590.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 271
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 50/197 (25%)
Query: 73 SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFC-------------- 118
S ++L +K +E SVE +LLV H HPHILL++ N+
Sbjct: 48 SAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINSRTRDADGMRTVPPSNT 107
Query: 119 ------KLPGGRLKPGENEIEGLKRKLTSKL--GANSPALVPD----------------- 153
+LPGGR + GE E L RKL L A +PA +
Sbjct: 108 NAEVTYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKTPAGAAEVASTGNSDTVVDVGMTH 167
Query: 154 --------WQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYFA-V 202
+++GE +A W+RP+F MYPY P HI +E + ++LVHL YF V
Sbjct: 168 TASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTIYLVHLEPTVYFTMV 227
Query: 203 PKNLKLLAVPLFELYDN 219
++++L+A PLF+LY+N
Sbjct: 228 QESVELVAAPLFDLYEN 244
>gi|342181834|emb|CCC91313.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 300
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 50/213 (23%)
Query: 62 GTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ--------- 112
GT + + ++L +K+ ++ SVE +LLV H+HPH+LLL+
Sbjct: 69 GTTTTNERRIKTPMEKLMSLKIRCREQQRVHSVEGVLLVHAHDHPHVLLLRHSVKTASRS 128
Query: 113 -------IGNTFC-KLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD----------- 153
I NT +LPGGR + GE E L RKL L S P
Sbjct: 129 RVLPPTNINNTAAYRLPGGRCRVGEQEELCLLRKLGRDLLNESKCPPPSHGSEEKQSETV 188
Query: 154 -------------------WQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLV 192
+++GE +A W+RP+F+ +MYPY P H+ + KE + +FLV
Sbjct: 189 VDISGSHSAGASAAVSSSSFRVGEVLARWYRPHFDPLMYPYIPAHVAENDVKEIRTIFLV 248
Query: 193 HLSEREYFA-VPKNLKLLAVPLFELYDNVQIWA 224
H+ + +L+A PLF+LYDN +
Sbjct: 249 HMPPHMLLTRACGDEELVAAPLFDLYDNTSKYG 281
>gi|390369680|ref|XP_001199751.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like, partial [Strongylocentrotus purpuratus]
Length = 119
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQI 113
YPL++YTFGTKEP EKD+SV R RMK + K G R SVE +L+V EH+ PH+LLLQ+
Sbjct: 1 YPLTNYTFGTKEPLYEKDSSVPARFQRMKDEFQKMGTRRSVEGVLIVHEHDLPHVLLLQL 60
Query: 114 GNTFCK 119
G TF K
Sbjct: 61 GTTFFK 66
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 189 LFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
L+ V L+E+ FAVP+N KL+A PLFELYDN
Sbjct: 72 LYFVQLAEKALFAVPRNYKLVAAPLFELYDN 102
>gi|72390984|ref|XP_845786.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175827|gb|AAX69954.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802322|gb|AAZ12227.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261329211|emb|CBH12190.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 300
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 50/182 (27%)
Query: 93 SVEAILLVQEHNHPHILLLQ-------------IGNTFC----KLPGGRLKPGENEIEGL 135
SVE +LLV H+HPH+LLL+ NT +LPGGR + GE E L
Sbjct: 100 SVEGVLLVHAHDHPHVLLLRHNVKTTNRSRVLPATNTNSTAVYRLPGGRCRNGEPEELCL 159
Query: 136 KRKLTSKL------------------------------GANSPALVPDWQIGECVAIWWR 165
RKL L G A +++GE +A W+R
Sbjct: 160 LRKLGRDLLNESKRLTSSSTAEEERSEVVVDVGSAHPNGTAVTASSSSFRVGEVLARWYR 219
Query: 166 PNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYF-AVPKNLKLLAVPLFELYDNVQI 222
P+F+ +MYPY P H+ + +E + +FLVH+ R + +L+A PLF+LYDN
Sbjct: 220 PHFDPLMYPYVPAHVAENDVREVRTIFLVHMPPRMLLTGTYGDEELVAAPLFDLYDNTAK 279
Query: 223 WA 224
+
Sbjct: 280 YG 281
>gi|401423694|ref|XP_003876333.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492575|emb|CBZ27852.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 271
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 94/202 (46%), Gaps = 50/202 (24%)
Query: 73 SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLL-QI---------------GNT 116
S ++L +K +E SVE +LLV H HPHILL+ QI NT
Sbjct: 48 SAIEKLLSLKKRCEEEPCVHSVEGVLLVHLHRHPHILLMKQINLRTRDADGVRTVPPSNT 107
Query: 117 FC----KLPGGRLKPGENEIEGLKRKLTSKL--GANSPALVPD----------------- 153
+LPGGR + GE E L RKL L A +PA +
Sbjct: 108 NAEVTYRLPGGRCRRGEAEESCLLRKLGRHLLNEAKTPAGAAEGTSASNSDTVVDVGMTH 167
Query: 154 --------WQIGECVAIWWRPNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYF-AV 202
+++GE +A W+RP+F MYPY P HI +E + ++LVHL YF V
Sbjct: 168 SASKAGSCFRVGEVLATWYRPHFTPHMYPYVPAHIAAGSVREVRTVYLVHLEPTVYFNMV 227
Query: 203 PKNLKLLAVPLFELYDNVQIWA 224
+ ++L+A PLF+LY+N +
Sbjct: 228 QEGVELVAAPLFDLYENSSKYG 249
>gi|389601578|ref|XP_001562265.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505101|emb|CAM39294.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 271
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 83/177 (46%), Gaps = 50/177 (28%)
Query: 93 SVEAILLVQEHNHPHILLLQIGNT--------------------FCKLPGGRLKPGENEI 132
SVE +LLV H HPH+LL++ N +LPGGR + GE E
Sbjct: 68 SVEGVLLVHLHRHPHVLLMKQINVRSRDADGMRTVPPSNMNAEVMYRLPGGRCRRGEAEE 127
Query: 133 EGLKRKLTSKL--GANSPALVPD-------------------------WQIGECVAIWWR 165
L RKL L A +PA + ++IGE ++ W+R
Sbjct: 128 GCLLRKLGRHLLNEAKTPAGASEVANTGHSDTVVDVGMAHNASKAGRFFRIGEVLSTWYR 187
Query: 166 PNFETIMYPYCPPHITKP--KECKKLFLVHLSEREYF-AVPKNLKLLAVPLFELYDN 219
P+F MYPY P HI +E + ++LVHL YF V + ++L+A PLF+LY+N
Sbjct: 188 PHFTPHMYPYVPAHIAASSVREVRTVYLVHLEPTVYFNMVQEGVELVAAPLFDLYEN 244
>gi|161899559|ref|XP_001713005.1| pre-mRNA cleavage factor I [Bigelowiella natans]
gi|75756500|gb|ABA27393.1| pre-mRNA cleavage factor I [Bigelowiella natans]
Length = 202
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ- 112
YP+ +Y F T + KD + +L R+K ++K G S ++I++V +H HP++LL +
Sbjct: 5 YPIENYKFYTSKAVKRKDRKMRHKLQRLKYKFLKFGSFASRKSIVIVTKHKHPYVLLFRS 64
Query: 113 IGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIM 172
+ F + +L ++ + LK+ + S L V+I+ R FE+ +
Sbjct: 65 FNDKFDIIDIDKLLKFKS--DHLKKVNLENVNNVSKNLFTKSMNSRLVSIFLRQGFESKL 122
Query: 173 YPYCPPHITKPKECKKLFLVHLSEREYFAV------PKNLKLLAVPLFELYDN 219
YPYC PHI K+ ++L L + E F V PKN ++ A P FE+Y N
Sbjct: 123 YPYCLPHIKYTKQIFFVYLNFLKKNELFQVLLSSKIPKNFEVKAFPFFEIYLN 175
>gi|183232665|ref|XP_001913751.1| pre-mRNA cleavage factor I 25 kDa subunit [Entamoeba histolytica
HM-1:IMSS]
gi|169801939|gb|EDS89479.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 129
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 120 LPGGRLKPGENE-IEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPP 178
L GGRLK GE++ +EGLKRKL K+ S + ++IGE + ++R ++ +YPY P
Sbjct: 9 LVGGRLKIGEDDPVEGLKRKLRKKM---SMEYITHYEIGELLGTFYRIEYDKNLYPYIPV 65
Query: 179 HITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
H+++ KE ++++HL E+ F + KL ++PLF L++N +
Sbjct: 66 HVSQVKEIINIYMIHLVEKCDFKIFDTDKLSSIPLFALHNNFE 108
>gi|403223795|dbj|BAM41925.1| mRNA cleavage factor subunit [Theileria orientalis strain Shintoku]
Length = 225
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 13/218 (5%)
Query: 36 EREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDT--SVADRLARMKV-NYMKEGMRT 92
E E ++S + P + YP + Y F K+ ++D + +V +YM GMR
Sbjct: 9 EAESYQDSG-IQRPEWDVYPQTIYKFDYNTTKVGSGLIFRLSDEVLSKRVRSYMVSGMRI 67
Query: 93 SVEAILLVQEHNHPHILLLQI-GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA------ 145
+V ++L P +LL+Q G+ L GG+ K EN E L KL + +
Sbjct: 68 TVCGVILSHIKGFPSVLLVQREGDRSLGLLGGKCKSFENPKEALSAKLARFITSTKHRHQ 127
Query: 146 -NSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPK 204
N V + Q+G+ + WR +F T PY P H +PKE L+ V +SE +VP+
Sbjct: 128 INIKEDVENIQVGDLLGDLWRCDFNTEPLPYLPLHSNRPKEKISLYQVTVSENCKISVPR 187
Query: 205 NLKLLAVPLFELYD-NVQIWASYFNHSSTAFQIPVQYD 241
L VPL++ Y+ + H + F I YD
Sbjct: 188 GFTLRFVPLYDFYNPEFGLSIGAIPHLLSRFNISYMYD 225
>gi|57997521|emb|CAI46057.1| hypothetical protein [Homo sapiens]
Length = 105
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
+N YPL++YTFGTKEP EKD+SVA R RM+ + K GMR +VE +L+V EH PH+L
Sbjct: 36 TINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVL 95
Query: 110 LL 111
LL
Sbjct: 96 LL 97
>gi|84997093|ref|XP_953268.1| mRNA cleavage factor subunit [Theileria annulata strain Ankara]
gi|65304264|emb|CAI76643.1| mRNA cleavage factor subunit, putative [Theileria annulata]
Length = 226
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 52 NTYPLSSYTFGTKEPKMEKDT--SVADRLARMKV-NYMKEGMRTSVEAILLVQEHNHPHI 108
+ YP + Y F K+ + ++D + +V Y GMR +V ++L P++
Sbjct: 24 DIYPQTMYKFEHNSTKVGRGLIFRLSDEILERRVKTYAVSGMRITVCGVILSHRKGFPYV 83
Query: 109 LLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLT-------SKLGANSPALVPDWQIGECV 160
LLL+ + L GG+ K EN E L KL K N + + +GE +
Sbjct: 84 LLLKRDLDKSVGLLGGKCKSFENPKEALSSKLARFITSTKHKHQLNIKDTMENIHVGELL 143
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYD 218
A +WR +F T PY P H +PKE L+ V L E +VPK L VPL++ Y+
Sbjct: 144 ADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVILPENCKISVPKGYNLKFVPLYDFYN 201
>gi|402593919|gb|EJW87846.1| pre-mRNA cleavage factor im, partial [Wuchereria bancrofti]
Length = 64
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 37/47 (78%)
Query: 173 YPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
YPY P H+TKPKE KLFLV L ER FAVPKN KL+A PLFELYDN
Sbjct: 1 YPYIPAHVTKPKEQTKLFLVQLPERALFAVPKNYKLVAAPLFELYDN 47
>gi|209877725|ref|XP_002140304.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555910|gb|EEA05955.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 231
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 27 DSLFLNREREREREKESKMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARM----- 81
DS +N E + P YPL +Y G + + + D +A M
Sbjct: 7 DSNLVNETTNEVEECPQNIDHEPTWLIYPLENY--GIRVDDNPSENLMEDSIANMNGFNK 64
Query: 82 KVN-YMKEGMRTSVEAILLVQEHNHPHILLLQIGNTF-CKLPGGRLKPGENEIEGLKRKL 139
KV+ ++++G+ SV A++L + PH++LLQ T LP + EN L L
Sbjct: 65 KVDSFLRDGIGRSVAALILTHRYLCPHVVLLQSDLTSEWMLPNCLYRAWENPRTVLVSFL 124
Query: 140 TSKLGANSPALVPD-WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSERE 198
S +S + + ++GE + WWR F PY PPH T+PKE +++ V L +
Sbjct: 125 KSLFFTDSNSTENNTAEVGEYLGSWWRTEFNYSPLPYLPPHSTRPKELIRIYQVLLPPKV 184
Query: 199 YFAVPKNLKLLAVPLFELYDNV 220
F +PK L ++PLF+L N+
Sbjct: 185 LFKLPKYHVLKSLPLFDLDPNI 206
>gi|71029236|ref|XP_764261.1| mRNA cleavage factor protein [Theileria parva strain Muguga]
gi|68351215|gb|EAN31978.1| mRNA cleavage factor protein, putative [Theileria parva]
Length = 226
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 11/178 (6%)
Query: 52 NTYPLSSYTFGTKEPKMEKDT--SVADRLARMKV-NYMKEGMRTSVEAILLVQEHNHPHI 108
+ YP + + F K+ + ++D + +V Y GMR +V ++L P +
Sbjct: 24 DVYPQTMFKFEHNTTKVGRGLIFRLSDDILEKRVKTYAVSGMRITVCGVILSHRKGFPFV 83
Query: 109 LLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA-------NSPALVPDWQIGECV 160
LLL+ + L GG+ K EN E L KL + + N + Q+GE +
Sbjct: 84 LLLKRDLDKSVGLLGGKCKSFENPKEVLSSKLARFITSTKHKHQLNIKETIETIQVGELL 143
Query: 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYD 218
A +WR +F T PY P H +PKE L+ V L E +VPK L VPL++ Y+
Sbjct: 144 ADFWRCDFNTEPLPYLPLHTNRPKEKISLYQVVLQESCKISVPKGYSLKFVPLYDFYN 201
>gi|389581861|dbj|GAB64582.1| mRNA cleavage factor-like protein, partial [Plasmodium cynomolgi
strain B]
Length = 159
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 103 HNHPHILLLQ-IGNTFCKLPGGRLKPGENEIEGLKRKL-------------TSKLGANSP 148
+ +PH+LLLQ I + L G+ + E E LKRKL TS L +
Sbjct: 1 YEYPHLLLLQNIESQEYYLLSGKYRSWEKPREVLKRKLQKYVNQIRDMHFSTSHLNSEQK 60
Query: 149 ALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKL 208
+ +IGE + WW+ F ++ PY P HIT+PKE +L+ V L+ R F +P L
Sbjct: 61 EIEDPIEIGEFLGEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRSIFHLPPGFTL 120
Query: 209 LAVPLFEL 216
A+PLF+L
Sbjct: 121 KALPLFDL 128
>gi|238601953|ref|XP_002395551.1| hypothetical protein MPER_04379 [Moniliophthora perniciosa FA553]
gi|215466474|gb|EEB96481.1| hypothetical protein MPER_04379 [Moniliophthora perniciosa FA553]
Length = 78
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 61 FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKL 120
+ TKE + E+D SV+ RL R++ NY GMR +VE IL+V +H HPHIL+LQI N F KL
Sbjct: 19 YSTKEAQPEEDPSVSARLQRLQNNYEDFGMRRTVEGILVVHDHGHPHILMLQIANAFFKL 78
>gi|406602004|emb|CCH46383.1| Cleavage and polyadenylation specificity factor subunit
[Wickerhamomyces ciferrii]
Length = 347
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 70/153 (45%), Gaps = 24/153 (15%)
Query: 89 GMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL--------- 139
G R ++ +++V P +LLL+ N +PGG L E+E G +R L
Sbjct: 147 GTRRFLQFLIVVGGEKEPAVLLLKEHNQLI-VPGGYLNHDEDEKTGAERILKELFDEEEL 205
Query: 140 ------------TSKLGANSPALVPD-WQIGECVAIWWRPNFETIMYPYCPPHITKPKEC 186
T+ S A V + IGE +A WWR + + +YPY P H+T+PKE
Sbjct: 206 AAENGNGDANGTTNGATNGSAATVQEPLTIGETIARWWRTDLKPFVYPYLPRHVTRPKEL 265
Query: 187 KKLFLVHLSEREYFAVPKNLKLLA-VPLFELYD 218
KL V L + + P K A PL +LYD
Sbjct: 266 IKLVYVDLPKTRKLSYPNFYKSFAPYPLVDLYD 298
>gi|156088887|ref|XP_001611850.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799104|gb|EDO08282.1| conserved hypothetical protein [Babesia bovis]
Length = 357
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 53 TYPLSSYTFGTKEPKMEKDT---SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHIL 109
YP SY+F + + + L + Y + G+R +V ++L + P IL
Sbjct: 20 VYPEDSYSFRDDSAPIGQGLLFRTPESLLCKRIRAYNQNGLRITVYGLILCHRNGFPCIL 79
Query: 110 LLQIGNTFCKLPGGRLKPGENEIEGLKRKL-----TSKLGA---NSPALVPDWQIGECVA 161
+L+ + L GG+ K EN E LK KL TS+ G N A V +GE +
Sbjct: 80 VLRDTSGNIGLLGGKCKSFENPREVLKLKLARFVSTSRKGVHQLNVRANVDTIIVGEFMG 139
Query: 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
+WR +++ + PY P HI +P+E ++ V L E+ F P ++ + + L E Y Q
Sbjct: 140 EFWRAEYDSDVLPYLPLHINRPREKILIYQVTLREQCSFIAPGDMHIEPMALHEFYCAEQ 199
Query: 222 IWA-SYFNHSSTAFQI 236
A S H T F +
Sbjct: 200 SVAISALPHLLTRFNL 215
>gi|66475808|ref|XP_627720.1| NUDIX domain protein; mRNA cleavage factor-like protein Im like,
plant+animal group [Cryptosporidium parvum Iowa II]
gi|32398958|emb|CAD98423.1| hypothetical predicted protein, unknown function [Cryptosporidium
parvum]
gi|46229142|gb|EAK89991.1| NUDIX domain protein; mRNA cleavage factor-like protein Im like,
plant+animal group [Cryptosporidium parvum Iowa II]
Length = 277
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 38/202 (18%)
Query: 54 YPLSSYTFGTKEPKMEKDTSV-ADRLARMKV---NYMKEGMRTSVEAILLVQEHNHPHIL 109
YPL +Y ++ E +S+ + + V N++K+G+ SV A++L + PH++
Sbjct: 54 YPLKNYGIRVQDNSDEIQSSIPINEMNGFNVKVDNFLKDGIGRSVAALMLTHRYLCPHVV 113
Query: 110 LLQIGNTF-CKLPGGRLKPGENEIEGLKRKLTSKL------------------------- 143
LLQ T LP K EN L L S
Sbjct: 114 LLQNDLTSEWMLPNCTYKAWENPRIVLANFLKSMFLTSSSINSNTNNSGSNNGNNNSSTN 173
Query: 144 -----GANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSERE 198
A S V ++GE + WWR F PY PPH T+PKE +++ V L +
Sbjct: 174 NNNINNACSDNAV---EVGEYLGTWWRTEFNYSPLPYLPPHSTRPKETIRIYQVILPPKL 230
Query: 199 YFAVPKNLKLLAVPLFELYDNV 220
F +PK+ L ++PLF+L N+
Sbjct: 231 LFKLPKHHVLKSLPLFDLDPNI 252
>gi|67609483|ref|XP_667008.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658093|gb|EAL36777.1| hypothetical protein Chro.60436 [Cryptosporidium hominis]
Length = 277
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 92/219 (42%), Gaps = 42/219 (19%)
Query: 41 KESKMVTS----PVVNTYPLSSYTFGTKEPKMEKDTSV----ADRLARMKVNYMKEGMRT 92
+E MVT+ P YPL +Y ++ E +S+ + N++K+G+
Sbjct: 37 EEQSMVTNVDHEPSWLIYPLKNYGIRVQDNSDEIQSSIPINEMNGFNGKVDNFLKDGIGR 96
Query: 93 SVEAILLVQEHNHPHILLLQIGNTF-CKLPGGRLKPGENEIEGLKRKLTSKL-------- 143
SV A++L + PH++LLQ T LP K EN L L S
Sbjct: 97 SVAALMLTHRYLCPHVVLLQNDLTSEWMLPNCTYKAWENPRIVLANFLKSMFLTSSSINS 156
Query: 144 ----------------------GANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHIT 181
A S V ++GE + WWR F PY PPH T
Sbjct: 157 NTNSSGSNSGNNNSSTNNNNINNACSDNAV---EVGEYLGTWWRTEFNYSPLPYLPPHST 213
Query: 182 KPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+PKE +++ V L + F +PK+ L ++PLF+L N+
Sbjct: 214 RPKETIRIYQVILPPKLLFKLPKHHVLKSLPLFDLDPNI 252
>gi|399218569|emb|CCF75456.1| unnamed protein product [Babesia microti strain RI]
Length = 313
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 73 SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEI 132
++ D L++ Y ++GMR S+ A++L +HN H+L ++ L GG+ ++
Sbjct: 28 TLGDFLSKRIDRYNRDGMRHSLFALILCHKHNFCHLLAVKNAKGELCLLGGKKTLYNSDK 87
Query: 133 EGLKRKLTS--------KLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPK 184
E L+ KL K + A +IG+ VA WW+ + PY PPH +
Sbjct: 88 ECLRSKLQKYIRPPKSLKNSLDIAAFDSHVEIGQVVAQWWKTKVDGRYLPYIPPHASTCV 147
Query: 185 ECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQI 222
E +F V + F +P L+AV L +L + I
Sbjct: 148 ETATIFQVTVQPGCIFQLPPGHTLVAVSLIDLMEEESI 185
>gi|429329523|gb|AFZ81282.1| mRNA cleavage factor-like protein, putative [Babesia equi]
Length = 186
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 36 EREREKESKMVTSPVVN--TYPLSSYTFGTKEPKMEKDT--SVADRLARMKV-NYMKEGM 90
E E E+ ++T + YP Y F T + + + L + ++ +Y + GM
Sbjct: 4 EVENEEGGALLTLDSIEWPIYPDYVYKFETNSTNTGRGLIFKLTNELVKKRLRSYSRSGM 63
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFC-KLPGGRLKPGENEIEGLKRKLTSKLGANS-- 147
RT+V +++ PH+LLL+ C L GG+ K EN E L KL + N+
Sbjct: 64 RTTVCGLIMCHSQGVPHVLLLKREEDGCYGLLGGKCKIYENPREKLSHKLARFITCNTRH 123
Query: 148 ------PALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKE 185
+ + + ++ E +A WWR ++ T P+ P H ++PKE
Sbjct: 124 ANLYDIKSSIENIKVKEFLADWWRCDYHTDPLPFLPLHTSRPKE 167
>gi|221504441|gb|EEE30114.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Toxoplasma
gondii VEG]
Length = 414
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
++GE + WWR F+ P+ PPH+T+PKE +L+ V L + F +P L A+PLF
Sbjct: 259 EVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIRLYQVQLPPKCSFRLPPAFSLAALPLF 318
Query: 215 EL 216
+L
Sbjct: 319 DL 320
>gi|237841303|ref|XP_002369949.1| mRNA cleavage factor-like protein, putative [Toxoplasma gondii
ME49]
gi|211967613|gb|EEB02809.1| mRNA cleavage factor-like protein, putative [Toxoplasma gondii
ME49]
Length = 414
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
++GE + WWR F+ P+ PPH+T+PKE +L+ V L + F +P L A+PLF
Sbjct: 259 EVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIRLYQVQLPPKCSFRLPPAFSLAALPLF 318
Query: 215 EL 216
+L
Sbjct: 319 DL 320
>gi|349806027|gb|AEQ18486.1| putative cleavage and polyadenylation specific factor 5 protein
[Hymenochirus curtipes]
Length = 72
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 181 TKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNV 220
+PKE KKLFLV L E+ FAVPKN KL+A PLFELYDN
Sbjct: 12 VEPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNA 51
>gi|221482388|gb|EEE20736.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Toxoplasma
gondii GT1]
Length = 419
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREY-----FAVPKNLKLL 209
++GE + WWR F+ P+ PPH+T+PKE +L L LS+ + F +P L
Sbjct: 259 EVGEFLGEWWRVEFDEEPQPFLPPHVTRPKERIRLRLFLLSQVQLPPKCSFRLPPAFSLA 318
Query: 210 AVPLFEL 216
A+PLF+L
Sbjct: 319 ALPLFDL 325
>gi|449703266|gb|EMD43748.1| pre-mRNA cleavage factor I 25 kDa subunit, putative [Entamoeba
histolytica KU27]
Length = 151
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 8/102 (7%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEK-DTSVADRLARMKVNYMKEGM-RTSVEAILLVQEHNHP 106
P++ YP+ +Y KE + + ++ ++K++ K + RTSV ++LV ++N P
Sbjct: 50 PLLKIYPIENYQIDKKEKLDKLKHQTFGYQMDQLKISVEKNHVPRTSVYGVILVHKNNFP 109
Query: 107 HILLLQIGNTF-----CKLPGGRLKPGENE-IEGLKRKLTSK 142
H+L+LQ + L GGRLK GE++ +EGLKRKL K
Sbjct: 110 HLLVLQSNLSMDLKDEIHLVGGRLKIGEDDPVEGLKRKLRKK 151
>gi|170060713|ref|XP_001865923.1| pre-mRNA cleavage factor im, 25kD subunit [Culex quinquefasciatus]
gi|167879104|gb|EDS42487.1| pre-mRNA cleavage factor im, 25kD subunit [Culex quinquefasciatus]
Length = 74
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 184 KECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQ 221
K C + LV + FAVPKN KL+A PLFELYDN Q
Sbjct: 16 KACSSVLLVLTQSKALFAVPKNYKLVAAPLFELYDNSQ 53
>gi|401397366|ref|XP_003880035.1| hypothetical protein NCLIV_004770 [Neospora caninum Liverpool]
gi|325114444|emb|CBZ50000.1| hypothetical protein NCLIV_004770 [Neospora caninum Liverpool]
Length = 402
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 155 QIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLF 214
++GE + W+ F+ P+ PPH+T+PKE +L+ V L F +P L A+PL
Sbjct: 252 EVGEFLGELWKSEFDEEPRPFLPPHVTRPKEKIRLYQVLLPPTCSFRLPPAFSLAAIPLC 311
Query: 215 EL 216
+L
Sbjct: 312 DL 313
>gi|330040399|ref|XP_003239893.1| hypothetical protein CPARA_3gp337 [Cryptomonas paramecium]
gi|327206819|gb|AEA38995.1| hypothetical protein CPARA_3gp337 [Cryptomonas paramecium]
Length = 198
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 54 YPLSSYTFGTKEPKMEKDTSVADRLARMKVNY--MKEGM--RTSVEAILLVQEHNHPHIL 109
Y +SSYTF K K K + ++ ++ NY ++E + + + ++L+ + PHIL
Sbjct: 13 YQISSYTFLNKNAKDVKWSK--SKVLKIYTNYEVLREFLAPKRYISFVILINIGDFPHIL 70
Query: 110 LLQIG-NTFCKLPGGRLK-PGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 167
L++ +PG RL +++I+ +L KL P + + IG W P
Sbjct: 71 LIRSKYEKVFYIPGSRLSISNKSKIKYSFLELQKKLNLKKPNIAKNTYIGS----WIFPE 126
Query: 168 FET-IMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDN 219
E+ + YP+ PPHI K K+ K+ V ++ V L AV F+L+ N
Sbjct: 127 KESRVKYPFFPPHIKKEKKEIKVQFVQFKDQGKIQVNSKWDLYAVLPFKLFAN 179
>gi|441508843|ref|ZP_20990765.1| hypothetical protein GOACH_07_00090 [Gordonia aichiensis NBRC
108223]
gi|441446848|dbj|GAC48726.1| hypothetical protein GOACH_07_00090 [Gordonia aichiensis NBRC
108223]
Length = 215
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 72 TSVADRLARMKVNYMKE-GMRTSVEAILLVQEHNHPHILLLQIGNTFCK------LPGGR 124
T DRLA ++ + + R + AI++ + + I +L+ T K LPGGR
Sbjct: 7 TIATDRLAALERRVVDDPAARPAAVAIVISSQADRQGIWILRRPLTMRKHAAQFALPGGR 66
Query: 125 LKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPY-------CP 177
L PGE I+ R+L +LG L PD +G R F +M P P
Sbjct: 67 LDPGEGVIDAALRELEEELGVT---LHPDDVLGLLDDYPTRSGF--LMTPVVCWSDEEVP 121
Query: 178 PHITKPKECKKLFLVHLSE 196
P P E +LF V L +
Sbjct: 122 PPTPSPAEVSELFFVPLDD 140
>gi|417937928|ref|ZP_12581228.1| hydrolase, NUDIX family [Streptococcus infantis SK970]
gi|343392192|gb|EGV04765.1| hydrolase, NUDIX family [Streptococcus infantis SK970]
Length = 181
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 70 KDTSVADRLARMKVNYMKEGM----RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRL 125
K T + + + KEG+ R V A+ + + NH I+L+Q N LPGG +
Sbjct: 25 KRTHEGESYGKSNIWRKKEGVTYKNRYGVYAV--IPDANHEKIILVQAPNGAWFLPGGEI 82
Query: 126 KPGENEIEGLKRKLTSKLG 144
+ GEN +E LKR+L +LG
Sbjct: 83 EEGENHLEALKRELIEELG 101
>gi|322392262|ref|ZP_08065723.1| MutT/NUDIX family protein [Streptococcus peroris ATCC 700780]
gi|321144797|gb|EFX40197.1| MutT/NUDIX family protein [Streptococcus peroris ATCC 700780]
Length = 149
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 87 KEGM----RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSK 142
KEG+ R V A++ Q NH I+L+Q N LPGG ++ GEN +E LKR+L +
Sbjct: 10 KEGVTYKNRYGVYAVIPDQ--NHEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEE 67
Query: 143 LG 144
LG
Sbjct: 68 LG 69
>gi|335029053|ref|ZP_08522565.1| hydrolase, NUDIX family [Streptococcus infantis SK1076]
gi|334269454|gb|EGL87871.1| hydrolase, NUDIX family [Streptococcus infantis SK1076]
Length = 169
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 70 KDTSVADRLARMKVNYMKEGM----RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRL 125
K T + + + KEG+ R V A+ + + NH I+L+Q N LPGG +
Sbjct: 13 KRTHEGEIYGKSNIWRKKEGVTYKNRYGVYAV--IPDANHEKIILVQAPNGAWFLPGGEI 70
Query: 126 KPGENEIEGLKRKLTSKLG 144
+ GEN +E LKR+L +LG
Sbjct: 71 EAGENHLEALKRELIEELG 89
>gi|417936501|ref|ZP_12579812.1| hydrolase, NUDIX family [Streptococcus infantis X]
gi|343400650|gb|EGV13163.1| hydrolase, NUDIX family [Streptococcus infantis X]
Length = 149
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 87 KEGM----RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSK 142
KEG+ R V A+ + + NH I+L+Q N LPGG ++ GEN +E LKR+L +
Sbjct: 10 KEGVTYKNRYGVYAV--IPDANHEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEE 67
Query: 143 LG 144
LG
Sbjct: 68 LG 69
>gi|322388199|ref|ZP_08061803.1| MutT/NUDIX family protein [Streptococcus infantis ATCC 700779]
gi|419842925|ref|ZP_14366255.1| NUDIX domain protein [Streptococcus infantis ATCC 700779]
gi|321140871|gb|EFX36372.1| MutT/NUDIX family protein [Streptococcus infantis ATCC 700779]
gi|385703353|gb|EIG40473.1| NUDIX domain protein [Streptococcus infantis ATCC 700779]
Length = 149
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 87 KEGM----RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSK 142
KEG+ R V A+ + + NH I+L+Q N LPGG ++ GEN +E LKR+L +
Sbjct: 10 KEGVTYKNRYGVYAV--IPDANHEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEE 67
Query: 143 LG 144
LG
Sbjct: 68 LG 69
>gi|421277678|ref|ZP_15728495.1| mutT/NUDIX family protein [Streptococcus mitis SPAR10]
gi|395874168|gb|EJG85255.1| mutT/NUDIX family protein [Streptococcus mitis SPAR10]
Length = 149
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 87 KEGM----RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSK 142
KEG+ R V A+ + + NH I+L+Q N LPGG ++ GEN +E LKR+L +
Sbjct: 10 KEGVTYKNRYGVYAV--IPDANHEKIILVQAPNGAWFLPGGEIEEGENHLEALKRELIEE 67
Query: 143 LG 144
LG
Sbjct: 68 LG 69
>gi|152995581|ref|YP_001340416.1| NUDIX hydrolase [Marinomonas sp. MWYL1]
gi|150836505|gb|ABR70481.1| NUDIX hydrolase [Marinomonas sp. MWYL1]
Length = 176
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GEN++EGL R+LT + GA + V + + E W R FE + M YC
Sbjct: 48 LPGGGVDEGENQVEGLIRELTEETGARNIRNVQAFGLYEEFRPWNRDGFEIMQMKSYC 105
>gi|441503193|ref|ZP_20985200.1| MutT/nudix family protein [Photobacterium sp. AK15]
gi|441429409|gb|ELR66864.1| MutT/nudix family protein [Photobacterium sp. AK15]
Length = 179
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GE+ +EGL R+L + GA + + + I E W++P+F+ + M YC
Sbjct: 48 LPGGGIDEGEDAVEGLIRELEEETGARNIRDITSFGIYEEYRPWYKPDFDIMHMESYC 105
>gi|71279921|ref|YP_267900.1| MutT/NUDIX family protein [Colwellia psychrerythraea 34H]
gi|71145661|gb|AAZ26134.1| MutT/NUDIX family protein [Colwellia psychrerythraea 34H]
Length = 180
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFC-KLPGGRLKPGENEIEGLKRKLTSKLGANSPA 149
R + AI+L N +ILLL LPGG + GE+ IEGL R+L + GA+S
Sbjct: 22 RNATRAIVL----NGDNILLLYTKRYHDYSLPGGGIDEGESNIEGLIRELKEETGAHSVK 77
Query: 150 LVPDWQIGECVAIWWRPNFETI-MYPYC 176
V + + E W + F+ I M YC
Sbjct: 78 DVEAFGLYEEFRPWHKEGFDIIHMQSYC 105
>gi|410615576|ref|ZP_11326595.1| NUDIX hydrolase [Glaciecola psychrophila 170]
gi|410164989|dbj|GAC40484.1| NUDIX hydrolase [Glaciecola psychrophila 170]
Length = 171
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GE+ I+GL R+LT + GA A + + E W++ NF TI M YC
Sbjct: 48 LPGGGVDEGEDIIKGLIRELTEETGAKGIADIVPFGRYEEFRPWYKNNFNTIHMNSYC 105
>gi|261408164|ref|YP_003244405.1| NUDIX hydrolase [Paenibacillus sp. Y412MC10]
gi|261284627|gb|ACX66598.1| NUDIX hydrolase [Paenibacillus sp. Y412MC10]
Length = 181
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 86 MKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
+E M ++V I E ++ QI + +LPGG L+PGE+ IEGL+R++ +LGA
Sbjct: 32 FEESMVSNVTIIPFAGER----CVIFQIADGSWELPGGTLEPGEDYIEGLRREVREELGA 87
>gi|309799582|ref|ZP_07693809.1| MutT/nudix family protein [Streptococcus infantis SK1302]
gi|308116802|gb|EFO54251.1| MutT/nudix family protein [Streptococcus infantis SK1302]
Length = 171
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 87 KEGM--RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
KEG+ +T ++ + H I+L+Q N LPGG ++ GE+ E LKR+L +LG
Sbjct: 10 KEGVTYKTRYGVYAVIPDSAHEKIILVQAPNGAWFLPGGEIEAGEDHFEALKRELIEELG 69
>gi|195490858|ref|XP_002093316.1| GE20837 [Drosophila yakuba]
gi|194179417|gb|EDW93028.1| GE20837 [Drosophila yakuba]
Length = 56
Score = 41.6 bits (96), Expect = 0.36, Method: Composition-based stats.
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 200 FAVPKNLKLLAVPLFELYDNVQ 221
FAVPKN KL+A PLFELYDN Q
Sbjct: 14 FAVPKNYKLVAAPLFELYDNSQ 35
>gi|329923044|ref|ZP_08278560.1| hydrolase, NUDIX family [Paenibacillus sp. HGF5]
gi|328941817|gb|EGG38102.1| hydrolase, NUDIX family [Paenibacillus sp. HGF5]
Length = 181
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 109 LLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
++ QI + +LPGG L+PGE IEGL+R++ +LGA
Sbjct: 51 VIFQIADGSWELPGGTLEPGEAYIEGLRREVREELGA 87
>gi|402815171|ref|ZP_10864764.1| ADP-ribose pyrophosphatase NudF [Paenibacillus alvei DSM 29]
gi|402507542|gb|EJW18064.1| ADP-ribose pyrophosphatase NudF [Paenibacillus alvei DSM 29]
Length = 193
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 95 EAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDW 154
E +L+V+++ P +G ++P G+L PGE IE R+L + G + L+P
Sbjct: 64 EKMLVVEQYRKP------LGRNQVEIPAGKLDPGEQPIEAAMRELEEETGYRANTLIP-- 115
Query: 155 QIGECVAIWWRPNF-ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 213
+ + P F + I+Y Y +T + H E E+ L++ A+ L
Sbjct: 116 ----LGSFYTSPGFADEIIYLYVAEQLTAGE-------AHTDEDEF------LEVGAMTL 158
Query: 214 FELYDNVQ---IWASYFNHSSTAFQIPVQYDYRLTLAW 248
E +D ++ I + ++ A+QI Y+LT W
Sbjct: 159 EEAFDAMRDGSISDAKTINAMYAWQI-----YKLTGKW 191
>gi|312883299|ref|ZP_07743025.1| MutT/NUDIX protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368915|gb|EFP96441.1| MutT/NUDIX protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 174
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG L GE+ +EGL R+L + GA + + + + I E W++ N E + M YC
Sbjct: 49 LPGGGLDEGEDLVEGLCRELKEETGARNISDIEPFGIYEEYRPWYKDNAEVMHMMSYC 106
>gi|392539678|ref|ZP_10286815.1| nudix hydrolase [Pseudoalteromonas marina mano4]
Length = 171
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GE+ +GL R+L+ + GA + +V D+ + E W++ +F+ I + YC
Sbjct: 48 LPGGGVDEGESIEQGLIRELSEETGAKNITVVKDFGLYEEYRPWYKKDFDIIHIKSYC 105
>gi|83858316|ref|ZP_00951838.1| hypothetical protein OA2633_02416 [Oceanicaulis sp. HTCC2633]
gi|83853139|gb|EAP90991.1| hypothetical protein OA2633_02416 [Oceanicaulis sp. HTCC2633]
Length = 692
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 14/105 (13%)
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPN 167
I L+++ C+L G + E I+ + ++S+ G ++ L+PDW + A+ RP
Sbjct: 292 IQLVRLKEAACRLAGASVLTAEPNIQ-VPDGVSSEAGLSARDLLPDWNATDIAALLARPV 350
Query: 168 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVP 212
F+ +Y H H S REY A LLA P
Sbjct: 351 FDEAIYGTVRFH-------------HRSVREYLAAVWFRDLLAKP 382
>gi|377562497|ref|ZP_09791888.1| hypothetical protein GOOTI_256_00210 [Gordonia otitidis NBRC
100426]
gi|377520323|dbj|GAB37053.1| hypothetical protein GOOTI_256_00210 [Gordonia otitidis NBRC
100426]
Length = 214
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 72 TSVADRLARMKVNYMKEG-MRTSVEAILLVQEHNHPHILLLQIGNTFCK------LPGGR 124
T DRLA ++ + + R + AI++ + + I +L+ T K LPGGR
Sbjct: 7 TIATDRLAALERRVVDDPEARPAAVAIVISSQADRQGIWILRRPLTMRKHAAQFALPGGR 66
Query: 125 LKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPY------CPP 178
L PGE I+ R+L +LG AL PD +G R F +M P
Sbjct: 67 LDPGEGVIDAALRELEEELGV---ALHPDDVLGLLDDYPTRSGF--VMTPVVCWAQDASA 121
Query: 179 HITKPKECKKLFLVHLSE 196
P E +LF V L +
Sbjct: 122 PSPSPDEVSELFFVPLDD 139
>gi|359447898|ref|ZP_09237459.1| hypothetical protein P20480_0157 [Pseudoalteromonas sp. BSi20480]
gi|358046297|dbj|GAA73708.1| hypothetical protein P20480_0157 [Pseudoalteromonas sp. BSi20480]
Length = 171
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GE+ +GL R+L+ + GA + +V D+ + E W++ +F+ I + YC
Sbjct: 48 LPGGGVDEGESIEQGLIRELSEETGAKNITVVKDFGLYEEYRPWYKNDFDIIHIKSYC 105
>gi|119471235|ref|ZP_01613738.1| putative nudix hydrolase family protein [Alteromonadales bacterium
TW-7]
gi|119445701|gb|EAW26984.1| putative nudix hydrolase family protein [Alteromonadales bacterium
TW-7]
Length = 171
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GE+ +GL R+L+ + GA + +V D+ + E W++ +F+ I + YC
Sbjct: 48 LPGGGVDEGESIEQGLIRELSEETGAKNITVVKDFGLYEEYRPWYKNDFDIIHIKSYC 105
>gi|269104238|ref|ZP_06156934.1| MutT/nudix family protein [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268160878|gb|EEZ39375.1| MutT/nudix family protein [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 179
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + GE+ + G+ R+L + GA + + ++ + E W++P+F+ + M YC
Sbjct: 48 LPGGGVDAGEDIVAGMIRELEEETGAQNIRNIKEFGLYEEYRPWYKPDFDIVHMESYC 105
>gi|444380041|ref|ZP_21179208.1| MutT/nudix family protein [Enterovibrio sp. AK16]
gi|443675862|gb|ELT82576.1| MutT/nudix family protein [Enterovibrio sp. AK16]
Length = 173
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG + ENE+EGL R+L+ + GA + + + E W + +F+ + M YC
Sbjct: 49 LPGGGIDEHENEVEGLVRELSEETGAQNIRNIRAFGAYEEFRPWHKSDFDVVHMLSYC 106
>gi|403737424|ref|ZP_10950220.1| hypothetical protein AUCHE_04_00300 [Austwickia chelonae NBRC
105200]
gi|403192372|dbj|GAB76990.1| hypothetical protein AUCHE_04_00300 [Austwickia chelonae NBRC
105200]
Length = 509
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 97 ILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL 150
+LLV++ P+ LL LPGGR +PGE+ I+ L+R+L +LGA+ +L
Sbjct: 391 VLLVRKTRGPYAGLLD-------LPGGRPEPGESRIDALRRELAEELGASRVSL 437
>gi|147677664|ref|YP_001211879.1| NTP pyrophosphohydrolases [Pelotomaculum thermopropionicum SI]
gi|146273761|dbj|BAF59510.1| NTP pyrophosphohydrolases [Pelotomaculum thermopropionicum SI]
Length = 178
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 92 TSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL 150
T E +LLV+++ HP +G T ++P G+L+PGE+ ++ +R+L + G + ++
Sbjct: 52 TDKEELLLVRQYRHP------VGKTLLEIPAGKLEPGEDPLDCARRELLEETGYEAGSM 104
>gi|218439820|ref|YP_002378149.1| NB-ARC domain-containing protein [Cyanothece sp. PCC 7424]
gi|218172548|gb|ACK71281.1| NB-ARC domain protein [Cyanothece sp. PCC 7424]
Length = 822
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 154 WQIGECVAIWWRPNFETI--MYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAV 211
W GE + I+ + E I + Y PP + P +C K+ + ++R + +N LLAV
Sbjct: 101 WTEGESLIIF--DDVEEIKQIESYLPPQVPPPNKCFKVIITTRNQR----ISRNFALLAV 154
Query: 212 PLFELYDNVQIWASYFNHSS 231
L L D++++ AS+ ++
Sbjct: 155 GLLTLEDSIKLLASFIGENT 174
>gi|448634595|ref|ZP_21674993.1| NUDIX hydrolase [Haloarcula vallismortis ATCC 29715]
gi|445749568|gb|EMA01013.1| NUDIX hydrolase [Haloarcula vallismortis ATCC 29715]
Length = 151
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 61 FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKL 120
F +P ++ TS R++ K +R+S + +LLV+E++ G F L
Sbjct: 4 FHVSKPTVDPTTSDLATGGRLRSG-AKALIRSS-DLVLLVREYH-------ADGTPFWTL 54
Query: 121 PGGRLKPGENEIEGLKRKLTSKLGANS 147
PGG ++ GE++ E L+R+L +LG S
Sbjct: 55 PGGGIQAGEDDREALERELVEELGCRS 81
>gi|418712848|ref|ZP_13273577.1| NUDIX domain protein [Leptospira interrogans str. UI 08452]
gi|421115977|ref|ZP_15576370.1| NUDIX domain protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410012473|gb|EKO70571.1| NUDIX domain protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410790617|gb|EKR84309.1| NUDIX domain protein [Leptospira interrogans str. UI 08452]
Length = 195
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVA---------DRLARMKVNYMKEGMRTSVEAILLV 100
VV T S F E + K TS + D L RM + K+G+R V A++
Sbjct: 2 VVPTSKPDSPRFSYDELTLSKKTSFSKSRFLGSKDDNLNRMDFFFKKKGLRVRVAALI-- 59
Query: 101 QEHNHPHILLLQ---IGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 143
E++ ILL+Q + + LPGG ++ GE+ + LKR+L +L
Sbjct: 60 -ENSQNEILLIQQKKKDSYYWLLPGGGIEFGESAEDALKRELKEEL 104
>gi|320450099|ref|YP_004202195.1| MutT/nudix family protein [Thermus scotoductus SA-01]
gi|320150268|gb|ADW21646.1| MutT/nudix family protein [Thermus scotoductus SA-01]
Length = 183
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 98 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP 152
LL++++ HP G ++P G++ PGEN +E +R+L ++GA + +P
Sbjct: 56 LLIRQYRHP------TGKFLLEIPAGKVDPGENPLEAAQRELMEEVGARAGRFLP 104
>gi|116327695|ref|YP_797415.1| ADP-ribose pyrophosphatase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116120439|gb|ABJ78482.1| ADP-ribose pyrophosphatase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 195
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 49 PVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHI 108
P +N P S T +K + S D L RM + +GMR V A++ E++ I
Sbjct: 13 PTLNLVPFLSKTCLSKSRFI---GSKDDNLNRMDFFFKNKGMRVRVAALI---ENSQHEI 66
Query: 109 LLLQ---IGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 143
LL+Q + + LPGG ++ GE+ LKR+L +L
Sbjct: 67 LLIQQKKKDSYYWLLPGGGIEFGESAENALKRELKEEL 104
>gi|257870181|ref|ZP_05649834.1| NUDIX family hydrolase [Enterococcus gallinarum EG2]
gi|257804345|gb|EEV33167.1| NUDIX family hydrolase [Enterococcus gallinarum EG2]
Length = 147
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 21/84 (25%)
Query: 61 FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKL 120
FG KEP AD ++R +V + H ++L+Q N L
Sbjct: 2 FGQKEPG-------ADYISRF--------------GAYVVIPNEHQQVILVQAPNGAFFL 40
Query: 121 PGGRLKPGENEIEGLKRKLTSKLG 144
PGG ++PGE++ E +KR+L ++G
Sbjct: 41 PGGEIEPGESKEETIKRELVEEVG 64
>gi|418973383|ref|ZP_13521379.1| NUDIX domain protein [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383349420|gb|EID27360.1| NUDIX domain protein [Streptococcus pseudopneumoniae ATCC BAA-960]
Length = 152
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 35 IVLIQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 71
>gi|24217146|ref|NP_714629.1| MutT/nudix family protein [Leptospira interrogans serovar Lai str.
56601]
gi|45655650|ref|YP_003459.1| MutT-like protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|386076105|ref|YP_005990294.1| ADP-ribose pyrophosphatase [Leptospira interrogans serovar Lai str.
IPAV]
gi|417759734|ref|ZP_12407768.1| NUDIX domain protein [Leptospira interrogans str. 2002000624]
gi|417776489|ref|ZP_12424326.1| NUDIX domain protein [Leptospira interrogans str. 2002000621]
gi|417787135|ref|ZP_12434820.1| NUDIX domain protein [Leptospira interrogans str. C10069]
gi|418666025|ref|ZP_13227456.1| NUDIX domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418671391|ref|ZP_13232743.1| NUDIX domain protein [Leptospira interrogans str. 2002000623]
gi|418699054|ref|ZP_13260021.1| NUDIX domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418710562|ref|ZP_13271332.1| NUDIX domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|24202184|gb|AAN51644.1| ADP-ribose pyrophosphatase [Leptospira interrogans serovar Lai str.
56601]
gi|45602621|gb|AAS72096.1| MutT-like protein [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|353459767|gb|AER04311.1| ADP-ribose pyrophosphatase [Leptospira interrogans serovar Lai str.
IPAV]
gi|409944482|gb|EKN90065.1| NUDIX domain protein [Leptospira interrogans str. 2002000624]
gi|409949987|gb|EKO04520.1| NUDIX domain protein [Leptospira interrogans str. C10069]
gi|410573698|gb|EKQ36743.1| NUDIX domain protein [Leptospira interrogans str. 2002000621]
gi|410581652|gb|EKQ49461.1| NUDIX domain protein [Leptospira interrogans str. 2002000623]
gi|410757972|gb|EKR19571.1| NUDIX domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410761914|gb|EKR28085.1| NUDIX domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410769151|gb|EKR44394.1| NUDIX domain protein [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|456825847|gb|EMF74225.1| NUDIX domain protein [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 195
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVA---------DRLARMKVNYMKEGMRTSVEAILLV 100
VV T S F E + K TS + D L RM + K+G+R V A++
Sbjct: 2 VVPTSKPDSPRFSYDELTLSKKTSFSKSRFLGSKDDNLNRMDFFFKKKGLRVRVAALI-- 59
Query: 101 QEHNHPHILLLQ---IGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 143
E++ +LL+Q + + LPGG ++ GE+ + LKR+L +L
Sbjct: 60 -ENSQNEVLLIQQKKKDSYYWLLPGGGIEFGESAEDALKRELKEEL 104
>gi|307706375|ref|ZP_07643187.1| NUDIX domain protein [Streptococcus mitis SK321]
gi|307618293|gb|EFN97448.1| NUDIX domain protein [Streptococcus mitis SK321]
Length = 150
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDSEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|332291172|ref|YP_004429781.1| NUDIX hydrolase [Krokinobacter sp. 4H-3-7-5]
gi|332169258|gb|AEE18513.1| NUDIX hydrolase [Krokinobacter sp. 4H-3-7-5]
Length = 183
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
LPGG L GE+ I G+ R+L + GA + + I E W++P+++ M YC
Sbjct: 49 LPGGGLDEGEDMIVGMMRELNEETGATGIQNIKPFGIYEEYRPWYKPDYDVQHMISYC 106
>gi|357050439|ref|ZP_09111637.1| hypothetical protein HMPREF9478_01620 [Enterococcus saccharolyticus
30_1]
gi|355381092|gb|EHG28219.1| hypothetical protein HMPREF9478_01620 [Enterococcus saccharolyticus
30_1]
Length = 153
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 21/85 (24%)
Query: 60 TFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCK 119
FG KEP AD ++R +V + H ++L+Q N
Sbjct: 7 VFGQKEPG-------ADYISRF--------------GAYVVIPNEHQQVILVQAPNGAFF 45
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLG 144
LPGG ++PGE++ E +KR+L ++G
Sbjct: 46 LPGGEIEPGESKEETIKRELVEEVG 70
>gi|157960294|ref|YP_001500328.1| NUDIX hydrolase [Shewanella pealeana ATCC 700345]
gi|157845294|gb|ABV85793.1| NUDIX hydrolase [Shewanella pealeana ATCC 700345]
Length = 137
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCK--LPGGRLKPGENEIEGLKRKLTSKLG 144
R S A++L Q + P +LLL+ C LPGG L PGE E L R+ +LG
Sbjct: 7 FRLSSHAVILKQGVSEPSVLLLKANYGECAWGLPGGALDPGETIHEALLRECQEELG 63
>gi|417772747|ref|ZP_12420635.1| NUDIX domain protein [Leptospira interrogans serovar Pomona str.
Pomona]
gi|409945424|gb|EKN95440.1| NUDIX domain protein [Leptospira interrogans serovar Pomona str.
Pomona]
Length = 195
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 50 VVNTYPLSSYTFGTKEPKMEKDTSVA---------DRLARMKVNYMKEGMRTSVEAILLV 100
VV T S F E + K TS + D L RM + K+G+R V A++
Sbjct: 2 VVPTSKPDSPRFSYNELTLSKKTSFSKSRFLGSKDDNLNRMDFFFKKKGLRVRVAALI-- 59
Query: 101 QEHNHPHILLLQ---IGNTFCKLPGGRLKPGENEIEGLKRKLTSKL 143
E++ +LL+Q + + LPGG ++ GE+ + LKR+L +L
Sbjct: 60 -ENSQNEVLLIQQKKKDSYYWLLPGGGIEFGESAEDALKRELKEEL 104
>gi|184156098|ref|YP_001844438.1| hypothetical protein LAF_1622 [Lactobacillus fermentum IFO 3956]
gi|183227442|dbj|BAG27958.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 276
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS-------PALVPDWQIGE 158
+G F +LPGG+LKPGE+ + L R+L +LG S P +V + GE
Sbjct: 27 HLGEGFWELPGGKLKPGEDPRQALMRELKEELGTASYIGERVLPTVVHTYDWGE 80
>gi|260662648|ref|ZP_05863542.1| radical SAM domain-containing protein [Lactobacillus fermentum
28-3-CHN]
gi|260552729|gb|EEX25728.1| radical SAM domain-containing protein [Lactobacillus fermentum
28-3-CHN]
Length = 276
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS-------PALVPDWQIGE 158
++G F +LPGG+LKPGE+ + L R+L +LG S P +V + GE
Sbjct: 27 RLGEGFWELPGGKLKPGEDPRQALMRELKEELGTASYIGERVLPTVVHTYDWGE 80
>gi|227515372|ref|ZP_03945421.1| conserved hypothetical protein [Lactobacillus fermentum ATCC 14931]
gi|227086286|gb|EEI21598.1| conserved hypothetical protein [Lactobacillus fermentum ATCC 14931]
Length = 270
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Query: 112 QIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS-------PALVPDWQIGE 158
++G F +LPGG+LKPGE+ + L R+L +LG S P +V + GE
Sbjct: 21 RLGEGFWELPGGKLKPGEDPRQALMRELKEELGTASYIGERVLPTVVHTYDWGE 74
>gi|419767536|ref|ZP_14293689.1| NUDIX domain protein [Streptococcus mitis SK579]
gi|383353079|gb|EID30706.1| NUDIX domain protein [Streptococcus mitis SK579]
Length = 150
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|289167711|ref|YP_003445980.1| hypothetical protein smi_0864 [Streptococcus mitis B6]
gi|418977619|ref|ZP_13525433.1| NUDIX domain protein [Streptococcus mitis SK575]
gi|288907278|emb|CBJ22113.1| conserved hypothetical protein [Streptococcus mitis B6]
gi|383349587|gb|EID27516.1| NUDIX domain protein [Streptococcus mitis SK575]
Length = 150
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|229822235|ref|YP_002883761.1| NUDIX hydrolase [Beutenbergia cavernae DSM 12333]
gi|229568148|gb|ACQ81999.1| NUDIX hydrolase [Beutenbergia cavernae DSM 12333]
Length = 154
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 86 MKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
M RT A LV++ +L+ + G T PGG+++PGE E L R++ +LG
Sbjct: 1 MSRAARTIRVAAGLVRDARGAVLLVRKAGTTAFMQPGGKIEPGEAPAEALAREIAEELGV 60
Query: 146 N 146
+
Sbjct: 61 D 61
>gi|418966484|ref|ZP_13518219.1| NUDIX domain protein [Streptococcus mitis SK616]
gi|383347289|gb|EID25279.1| NUDIX domain protein [Streptococcus mitis SK616]
Length = 150
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|307709100|ref|ZP_07645559.1| NUDIX domain protein [Streptococcus mitis SK564]
gi|307620046|gb|EFN99163.1| NUDIX domain protein [Streptococcus mitis SK564]
Length = 150
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|417847958|ref|ZP_12493916.1| hydrolase, NUDIX family [Streptococcus mitis SK1073]
gi|339455858|gb|EGP68456.1| hydrolase, NUDIX family [Streptococcus mitis SK1073]
Length = 150
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|307708516|ref|ZP_07644981.1| MutT/nudix family protein [Streptococcus mitis NCTC 12261]
gi|307615432|gb|EFN94640.1| MutT/nudix family protein [Streptococcus mitis NCTC 12261]
Length = 150
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|322376373|ref|ZP_08050866.1| MutT/NUDIX family protein [Streptococcus sp. M334]
gi|321282180|gb|EFX59187.1| MutT/NUDIX family protein [Streptococcus sp. M334]
Length = 150
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 108 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 33 IVLVQAPNGAWFLPGGEIEAGENHQEALKRELIEELG 69
>gi|414070792|ref|ZP_11406772.1| putative nudix hydrolase family protein [Pseudoalteromonas sp.
Bsw20308]
gi|410806809|gb|EKS12795.1| putative nudix hydrolase family protein [Pseudoalteromonas sp.
Bsw20308]
Length = 171
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 78 LARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTF--CKLPGGRLKPGENEIEGL 135
L +N K + T + A +V ++N +LL N + LPGG + GE+ +GL
Sbjct: 7 LIHSGININKGTIFTRLTARAIVTKNNK---ILLMYTNRYEDYSLPGGGVDDGESIEQGL 63
Query: 136 KRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETI-MYPYC 176
R+L+ + GA ++V + + E W++ +F+ I + YC
Sbjct: 64 IRELSEETGAQQISVVKAFGLYEEYRPWYKEDFDIIHIKSYC 105
>gi|307704886|ref|ZP_07641777.1| NUDIX domain protein [Streptococcus mitis SK597]
gi|417849635|ref|ZP_12495554.1| hydrolase, NUDIX family [Streptococcus mitis SK1080]
gi|307621500|gb|EFO00546.1| NUDIX domain protein [Streptococcus mitis SK597]
gi|339455931|gb|EGP68528.1| hydrolase, NUDIX family [Streptococcus mitis SK1080]
Length = 150
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V A++ E I+L+Q N LPGG ++ GEN E LKR+L +LG
Sbjct: 18 RYGVYAVIPDAEQKQ--IVLVQAPNGAWFLPGGEIESGENHQEALKRELIEELG 69
>gi|336392363|ref|ZP_08573762.1| MutT/nudix family protein [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 150
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146
+T + A ++V + IL+++ N LPGG ++PGE+++E + R+L ++G
Sbjct: 16 KTRIGAYVVVPDAAQKQILVVEPPNHSYLLPGGGIEPGESDVETIVRELIEEVGGT 71
>gi|306827042|ref|ZP_07460340.1| NUDIX family hydrolase [Streptococcus pyogenes ATCC 10782]
gi|304430788|gb|EFM33799.1| NUDIX family hydrolase [Streptococcus pyogenes ATCC 10782]
Length = 151
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V AI + H I+L+Q N LPGG+++ GE +++ L+R+L +LG
Sbjct: 18 RYGVYAI--IPNHEQTKIILVQAPNGSWFLPGGKIEAGEGQLQALERELIEELG 69
>gi|333394499|ref|ZP_08476318.1| MutT/nudix family protein [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
gi|420145300|ref|ZP_14652770.1| NUDIX family hydrolase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403076|gb|EJN56351.1| NUDIX family hydrolase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 150
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146
+T + A ++V + IL+++ N LPGG ++PGE+++E + R+L ++G
Sbjct: 16 KTRIGAYVVVPDAAQKQILVVEPPNHSYLLPGGGIEPGESDVETIVRELIEEVGGT 71
>gi|339640755|ref|ZP_08662199.1| hydrolase, NUDIX family [Streptococcus sp. oral taxon 056 str.
F0418]
gi|339454024|gb|EGP66639.1| hydrolase, NUDIX family [Streptococcus sp. oral taxon 056 str.
F0418]
Length = 154
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 82 KVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTS 141
KV ++ R V AI + + + I+L+Q N LPGG ++ GE+ + LKR+L
Sbjct: 14 KVEGVEYNNRYGVYAI--ISDETNSQIILVQAPNGAWFLPGGEIEKGEDHLSALKRELIE 71
Query: 142 KLG 144
+LG
Sbjct: 72 ELG 74
>gi|308048397|ref|YP_003911963.1| NUDIX hydrolase [Ferrimonas balearica DSM 9799]
gi|307630587|gb|ADN74889.1| NUDIX hydrolase [Ferrimonas balearica DSM 9799]
Length = 173
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPAL 150
R SV A++ H +LL LPGG + GE+ + L R++ + GA +
Sbjct: 21 RLSVRALI---AHGDQVLLLYTARYDDYSLPGGGVDDGESLQQALLREVAEETGARGLTV 77
Query: 151 VPDWQIGECVAIWWRPNFETI-MYPYC 176
+ ++ + E + W++P+++ + M YC
Sbjct: 78 LAEFGLVEELRPWYKPDYDNVRMLSYC 104
>gi|418063000|ref|ZP_12700730.1| NUDIX hydrolase [Methylobacterium extorquens DSM 13060]
gi|373562914|gb|EHP89118.1| NUDIX hydrolase [Methylobacterium extorquens DSM 13060]
Length = 174
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 117 FCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAI 162
F +PGG L+PGE+ E +R+L+ ++G V D ++G CVA+
Sbjct: 47 FWFMPGGGLEPGESHEEACRRELSEEIG------VADVELGPCVAV 86
>gi|240138084|ref|YP_002962556.1| mutator protein MutT/NUDIX-family hydrolase [Methylobacterium
extorquens AM1]
gi|240008053|gb|ACS39279.1| Putative mutator protein MutT/NUDIX-family hydrolase
[Methylobacterium extorquens AM1]
Length = 177
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 117 FCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAI 162
F +PGG L+PGE+ E +R+L+ ++G V D ++G CVA+
Sbjct: 50 FWFMPGGGLEPGESHEEACRRELSEEIG------VADVELGPCVAV 89
>gi|456862170|gb|EMF80748.1| NUDIX domain protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 175
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 73 SVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ---IGNTFCKLPGGRLKPGE 129
S D L RM + +GMR V A++ E++ ILL+Q + + LPGG ++ GE
Sbjct: 14 SKDDNLNRMDFFFKNKGMRVRVAALI---ENSRNEILLIQQKKKNSYYWLLPGGGIEFGE 70
Query: 130 NEIEGLKRKLTSKL 143
+ LKR+L +L
Sbjct: 71 GAEDALKRELKEEL 84
>gi|222096513|ref|YP_002530570.1| phosphohydrolase (mutt/nudix family protein) [Bacillus cereus Q1]
gi|221240571|gb|ACM13281.1| Phosphohydrolase (MutT/nudix family protein) [Bacillus cereus Q1]
Length = 155
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 103 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
HN+ ++L G F +PGGR+K EN + LKR+L +LG
Sbjct: 22 HNNKILILQGDGEDFWYVPGGRVKMLENSEDALKRELAEELGV 64
>gi|218296846|ref|ZP_03497541.1| NUDIX hydrolase [Thermus aquaticus Y51MC23]
gi|218242726|gb|EED09261.1| NUDIX hydrolase [Thermus aquaticus Y51MC23]
Length = 182
Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 98 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVP 152
LL++++ HP G ++P G++ PGE +E KR+L ++GA + +P
Sbjct: 56 LLIRQYRHP------TGKFLLEVPAGKVDPGETPMEAAKRELMEEVGAEAQTYLP 104
>gi|71903842|ref|YP_280645.1| mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS6180]
gi|71802937|gb|AAX72290.1| mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS6180]
Length = 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V AI + H I+L+Q N LPGG ++ GE +++ L+R+L +LG
Sbjct: 18 RYGVYAI--IPNHEQTKIILVQAPNGSWFLPGGEIEAGEGQLQALERELIEELG 69
>gi|94544274|gb|ABF34322.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS10270]
Length = 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V AI + H I+L+Q N LPGG ++ GE +++ L+R+L +LG
Sbjct: 18 RCGVYAI--IPNHEQTKIILVQAPNGSWFLPGGEIEAGEGQLQALERELIEELG 69
>gi|423611438|ref|ZP_17587299.1| hypothetical protein IIM_02153 [Bacillus cereus VD107]
gi|401247769|gb|EJR54097.1| hypothetical protein IIM_02153 [Bacillus cereus VD107]
Length = 155
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 103 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145
H++ ++L G F +PGGR+K EN + LKR+LT +LG
Sbjct: 22 HDNKILILQGDGEGFWYVPGGRVKMLENSEDALKRELTEELGV 64
>gi|15675412|ref|NP_269586.1| mutator protein [Streptococcus pyogenes SF370]
gi|19746462|ref|NP_607598.1| mutator protein [Streptococcus pyogenes MGAS8232]
gi|21910700|ref|NP_664968.1| MutT/NUDIX family mutator protein [Streptococcus pyogenes MGAS315]
gi|28895610|ref|NP_801960.1| mutator protein [Streptococcus pyogenes SSI-1]
gi|50914608|ref|YP_060580.1| hypothetical protein M6_Spy1262 [Streptococcus pyogenes MGAS10394]
gi|56807844|ref|ZP_00365684.1| COG0494: NTP pyrophosphohydrolases including oxidative damage
repair enzymes [Streptococcus pyogenes M49 591]
gi|71911054|ref|YP_282604.1| 7,8-dihydro-8-oxoguanine-triphosphatase [Streptococcus pyogenes
MGAS5005]
gi|94988866|ref|YP_596967.1| mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS9429]
gi|94992756|ref|YP_600855.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS2096]
gi|139473466|ref|YP_001128182.1| Mut/NUDIX family protein [Streptococcus pyogenes str. Manfredo]
gi|209559676|ref|YP_002286148.1| MutT/nudix family protein [Streptococcus pyogenes NZ131]
gi|383480266|ref|YP_005389160.1| 7,8-dihydro-8-oxoguanine-triphosphatase/mutator protein MutT
[Streptococcus pyogenes MGAS15252]
gi|383494248|ref|YP_005411924.1| 7,8-dihydro-8-oxoguanine-triphosphatase/mutator protein MutT
[Streptococcus pyogenes MGAS1882]
gi|386363043|ref|YP_006072374.1| mutT/nudix family protein [Streptococcus pyogenes Alab49]
gi|410680908|ref|YP_006933310.1| mutT/nudix family protein [Streptococcus pyogenes A20]
gi|417856575|ref|ZP_12501634.1| mutT/nudix family protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|13622599|gb|AAK34307.1| putative mutator protein [Streptococcus pyogenes M1 GAS]
gi|19748665|gb|AAL98097.1| putative mutator protein [Streptococcus pyogenes MGAS8232]
gi|21904903|gb|AAM79771.1| putative MutT/nudix family mutator protein [Streptococcus pyogenes
MGAS315]
gi|28810859|dbj|BAC63793.1| putative mutator protein [Streptococcus pyogenes SSI-1]
gi|50903682|gb|AAT87397.1| MutT [Streptococcus pyogenes MGAS10394]
gi|71853836|gb|AAZ51859.1| mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS5005]
gi|94542374|gb|ABF32423.1| mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS9429]
gi|94546264|gb|ABF36311.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS2096]
gi|134271713|emb|CAM29946.1| Mut/NUDIX family protein [Streptococcus pyogenes str. Manfredo]
gi|209540877|gb|ACI61453.1| MutT/nudix family protein [Streptococcus pyogenes NZ131]
gi|350277452|gb|AEQ24820.1| mutT/nudix family protein [Streptococcus pyogenes Alab49]
gi|378928256|gb|AFC66462.1| 7,8-dihydro-8-oxoguanine-triphosphatase/mutator protein MutT
[Streptococcus pyogenes MGAS15252]
gi|378929975|gb|AFC68392.1| 7,8-dihydro-8-oxoguanine-triphosphatase/mutator protein MutT
[Streptococcus pyogenes MGAS1882]
gi|387933530|gb|EIK41643.1| mutT/nudix family protein [Streptococcus pyogenes HKU
QMH11M0907901]
gi|395454295|dbj|BAM30634.1| 7,8-dihydro-8-oxoguanine-triphosphatase [Streptococcus pyogenes M1
476]
gi|409693497|gb|AFV38357.1| mutT/nudix family protein [Streptococcus pyogenes A20]
Length = 151
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V AI + H I+L+Q N LPGG ++ GE +++ L+R+L +LG
Sbjct: 18 RYGVYAI--IPNHEQTKIILVQAPNGSWFLPGGEIEAGEGQLQALERELIEELG 69
>gi|421892499|ref|ZP_16323152.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes NS88.2]
gi|379981751|emb|CCG26874.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes NS88.2]
Length = 151
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V AI + H I+L+Q N LPGG ++ GE +++ L+R+L +LG
Sbjct: 18 RYGVYAI--IPNHKQTKIILVQAPNGSWFLPGGEIEAGEGQLQALERELIEELG 69
>gi|94994744|ref|YP_602842.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS10750]
gi|94548252|gb|ABF38298.1| Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
[Streptococcus pyogenes MGAS10750]
Length = 151
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
R V AI + H I+L+Q N LPGG ++ GE +++ L+R+L +LG
Sbjct: 18 RYGVYAI--IPNHEQTKIILVQAPNGSWFLPGGEIEAGEGQLQALERELIEELG 69
>gi|418690958|ref|ZP_13252065.1| 3-dehydroquinate synthase [Leptospira interrogans str. FPW2026]
gi|400359994|gb|EJP15975.1| 3-dehydroquinate synthase [Leptospira interrogans str. FPW2026]
Length = 556
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ---IGNTFCKLPGGRLKPGENEI 132
D L RM + K+G+R V A++ E++ +LL+Q + + LPGG ++ GE+
Sbjct: 37 DNLNRMDFFFKKKGLRVRVAALI---ENSQNEVLLIQQKKKDSYYWLLPGGGIEFGESAE 93
Query: 133 EGLKRKLTSKL 143
+ LKR+L +L
Sbjct: 94 DALKRELKEEL 104
>gi|254515232|ref|ZP_05127293.1| mutator MutT protein [gamma proteobacterium NOR5-3]
gi|219677475|gb|EED33840.1| mutator MutT protein [gamma proteobacterium NOR5-3]
Length = 125
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 94 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLG 144
+ ILL + H H H + PGG+L+PGE+ E LKR+L ++G
Sbjct: 9 ADQILLTKRHAHSH------QGGLWEFPGGKLEPGESLAEALKRELLEEVG 53
>gi|308176904|ref|YP_003916310.1| NUDIX hydrolase [Arthrobacter arilaitensis Re117]
gi|307744367|emb|CBT75339.1| NUDIX domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 146
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 98 LLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTS------KLGANSPALV 151
LL N P L + PGG+++PGE+E+E ++R+L +LGA P
Sbjct: 23 LLAARRNRPEAL-----AGLWEFPGGKVEPGESEVEAVRRELREELGVQLRLGAPIPGPH 77
Query: 152 P-DWQIGECVAI 162
P WQ+ E A+
Sbjct: 78 PQGWQLNEKAAM 89
>gi|357021005|ref|ZP_09083236.1| CTP pyrophosphohydrolase [Mycobacterium thermoresistibile ATCC
19527]
gi|356478753|gb|EHI11890.1| CTP pyrophosphohydrolase [Mycobacterium thermoresistibile ATCC
19527]
Length = 125
Score = 37.0 bits (84), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 94 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146
+A LLV + N P L + +LPGG++ PGE E E L R+L +LG +
Sbjct: 8 ADAALLVAQRNRPPELAGR-----WELPGGKVAPGETEAEALVRELKEELGVD 55
>gi|163850952|ref|YP_001638995.1| NUDIX hydrolase [Methylobacterium extorquens PA1]
gi|163662557|gb|ABY29924.1| NUDIX hydrolase [Methylobacterium extorquens PA1]
Length = 441
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
Query: 120 LPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAI 162
+PGG L+PGE+ E +R+L+ ++G V D ++G CVA+
Sbjct: 317 MPGGGLEPGESHEEACRRELSEEIG------VADVELGPCVAV 353
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,596,374,234
Number of Sequences: 23463169
Number of extensions: 187700991
Number of successful extensions: 467856
Number of sequences better than 100.0: 451
Number of HSP's better than 100.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 467055
Number of HSP's gapped (non-prelim): 464
length of query: 282
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 141
effective length of database: 9,050,888,538
effective search space: 1276175283858
effective search space used: 1276175283858
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)