Query 039176
Match_columns 282
No_of_seqs 98 out of 116
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 11:41:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bho_A Cleavage and polyadenyl 100.0 9.6E-84 3.3E-88 572.4 17.0 190 45-235 12-201 (208)
2 3i7u_A AP4A hydrolase; nudix p 98.2 4.2E-06 1.4E-10 66.1 7.0 65 90-163 1-65 (134)
3 3eds_A MUTT/nudix family prote 97.9 0.00012 4E-09 57.9 11.1 129 76-218 5-134 (153)
4 1ktg_A Diadenosine tetraphosph 97.9 2.4E-05 8.3E-10 59.6 6.5 55 91-145 3-59 (138)
5 2pbt_A AP4A hydrolase; nudix p 97.9 3E-05 1E-09 58.6 7.0 39 107-145 16-54 (134)
6 1vcd_A NDX1; nudix protein, di 97.9 0.00014 4.7E-09 54.6 10.2 64 90-163 1-64 (126)
7 3son_A Hypothetical nudix hydr 97.8 3E-05 1E-09 60.3 5.7 59 89-147 1-62 (149)
8 3oga_A Nucleoside triphosphata 97.7 0.00012 3.9E-09 58.1 7.7 60 84-145 19-84 (165)
9 3f13_A Putative nudix hydrolas 97.7 0.00031 1E-08 57.5 10.3 39 107-145 28-66 (163)
10 3i9x_A MUTT/nudix family prote 97.6 0.00015 5.2E-09 59.3 6.9 67 92-165 28-109 (187)
11 3id9_A MUTT/nudix family prote 97.5 0.00039 1.3E-08 55.3 9.0 79 77-166 9-89 (171)
12 3gz5_A MUTT/nudix family prote 97.5 0.00023 7.8E-09 62.0 7.9 73 90-169 21-99 (240)
13 2fvv_A Diphosphoinositol polyp 97.5 0.00012 4.2E-09 61.5 5.7 73 84-164 33-107 (194)
14 3f6a_A Hydrolase, nudix family 97.5 0.00016 5.5E-09 57.1 6.1 52 91-145 5-57 (159)
15 3gg6_A Nudix motif 18, nucleos 97.5 0.0011 3.6E-08 51.9 10.5 104 89-218 18-129 (156)
16 3shd_A Phosphatase NUDJ; nudix 97.5 0.00023 7.7E-09 55.4 6.4 103 93-216 5-112 (153)
17 2fb1_A Conserved hypothetical 97.4 0.00037 1.3E-08 60.0 8.0 69 89-164 11-83 (226)
18 3u53_A BIS(5'-nucleosyl)-tetra 97.4 0.00023 7.8E-09 56.3 6.1 51 95-145 6-65 (155)
19 2azw_A MUTT/nudix family prote 97.4 0.00039 1.3E-08 53.3 7.2 89 91-196 18-107 (148)
20 2yyh_A MUTT domain, 8-OXO-DGTP 97.4 0.0009 3.1E-08 51.3 9.1 87 90-194 8-97 (139)
21 2o1c_A DATP pyrophosphohydrola 97.4 0.00028 9.7E-09 53.8 5.9 52 92-145 10-63 (150)
22 3gwy_A Putative CTP pyrophosph 97.3 0.00046 1.6E-08 53.2 6.7 72 106-197 17-95 (140)
23 1rya_A GDP-mannose mannosyl hy 97.3 0.00066 2.3E-08 52.8 7.4 56 88-146 15-74 (160)
24 2b0v_A Nudix hydrolase; struct 97.3 0.00044 1.5E-08 53.4 6.2 62 93-163 8-73 (153)
25 1sjy_A MUTT/nudix family prote 97.3 0.0011 3.6E-08 51.6 8.3 87 90-197 11-105 (159)
26 1nqz_A COA pyrophosphatase (MU 97.3 0.00039 1.3E-08 56.9 5.9 113 87-220 30-152 (194)
27 2fkb_A Putative nudix hydrolas 97.2 0.00093 3.2E-08 53.6 7.7 58 87-146 32-96 (180)
28 2fml_A MUTT/nudix family prote 97.2 0.00081 2.8E-08 59.6 7.9 57 89-145 37-99 (273)
29 3o8s_A Nudix hydrolase, ADP-ri 97.2 0.0018 6.1E-08 54.4 9.4 107 91-217 70-177 (206)
30 1q27_A Putative nudix hydrolas 97.2 0.0034 1.2E-07 49.8 10.6 54 91-147 34-94 (171)
31 3h95_A Nucleoside diphosphate- 97.2 0.00053 1.8E-08 56.9 5.9 62 92-162 27-91 (199)
32 1f3y_A Diadenosine 5',5'''-P1, 97.2 0.00063 2.2E-08 52.8 6.0 54 89-145 12-67 (165)
33 2w4e_A MUTT/nudix family prote 97.2 0.00059 2E-08 53.5 5.9 51 93-145 6-61 (145)
34 3grn_A MUTT related protein; s 97.2 0.0008 2.7E-08 52.6 6.6 53 91-146 8-66 (153)
35 2rrk_A ORF135, CTP pyrophospho 97.2 0.00091 3.1E-08 50.7 6.7 39 107-145 21-64 (140)
36 2jvb_A Protein PSU1, mRNA-deca 97.1 0.00048 1.6E-08 53.1 5.0 52 94-146 6-58 (146)
37 3fcm_A Hydrolase, nudix family 97.1 0.00082 2.8E-08 55.5 6.6 55 91-146 44-99 (197)
38 3exq_A Nudix family hydrolase; 97.1 0.0007 2.4E-08 53.9 6.0 54 91-145 9-66 (161)
39 2pqv_A MUTT/nudix family prote 97.1 0.00039 1.3E-08 54.2 4.4 52 89-145 17-68 (154)
40 3fk9_A Mutator MUTT protein; s 97.1 0.00076 2.6E-08 55.9 6.1 52 90-145 3-55 (188)
41 2kdv_A RNA pyrophosphohydrolas 97.1 0.00077 2.6E-08 54.4 5.9 54 89-145 6-60 (164)
42 3r03_A Nudix hydrolase; struct 97.1 0.0009 3.1E-08 51.2 6.0 50 94-145 10-64 (144)
43 3ees_A Probable pyrophosphohyd 97.1 0.001 3.5E-08 51.0 6.2 50 93-145 23-77 (153)
44 2b06_A MUTT/nudix family prote 97.1 0.00089 3.1E-08 52.1 5.9 55 91-145 8-65 (155)
45 1k2e_A Nudix homolog; nudix/MU 97.1 0.0009 3.1E-08 52.9 5.8 49 93-145 3-52 (156)
46 3q93_A 7,8-dihydro-8-oxoguanin 97.0 0.001 3.6E-08 54.2 6.3 40 106-145 36-79 (176)
47 1hzt_A Isopentenyl diphosphate 97.0 0.00069 2.3E-08 55.4 5.1 58 87-146 27-91 (190)
48 4dyw_A MUTT/nudix family prote 97.0 0.0016 5.4E-08 51.7 6.8 51 91-145 29-83 (157)
49 3cng_A Nudix hydrolase; struct 97.0 0.0013 4.3E-08 54.2 6.5 69 107-197 52-124 (189)
50 2yvp_A NDX2, MUTT/nudix family 97.0 0.0011 3.6E-08 53.6 5.7 104 94-219 43-154 (182)
51 1v8y_A ADP-ribose pyrophosphat 96.9 0.0015 5.2E-08 52.3 6.2 102 94-219 36-144 (170)
52 3hhj_A Mutator MUTT protein; n 96.9 0.0017 5.8E-08 51.0 6.4 41 106-146 41-86 (158)
53 3q1p_A Phosphohydrolase (MUTT/ 96.9 0.0015 5.1E-08 54.8 6.2 106 92-217 69-176 (205)
54 2a6t_A SPAC19A8.12; alpha/beta 96.9 0.002 6.9E-08 57.4 7.0 66 81-147 90-157 (271)
55 1vhz_A ADP compounds hydrolase 96.7 0.013 4.4E-07 49.0 10.7 99 107-226 61-166 (198)
56 1mut_A MUTT, nucleoside tripho 96.7 0.0019 6.5E-08 48.1 4.9 40 106-145 16-60 (129)
57 1q33_A Pyrophosphatase, ADP-ri 96.5 0.0048 1.7E-07 55.5 6.9 57 89-145 108-179 (292)
58 2qjo_A Bifunctional NMN adenyl 96.3 0.0052 1.8E-07 54.0 6.0 50 92-145 204-257 (341)
59 2qjt_B Nicotinamide-nucleotide 96.2 0.012 4E-07 52.3 7.6 40 106-145 219-262 (352)
60 1mk1_A ADPR pyrophosphatase; n 96.2 0.0056 1.9E-07 51.2 5.3 49 95-145 46-100 (207)
61 1x51_A A/G-specific adenine DN 96.1 0.0074 2.5E-07 47.3 5.4 39 106-144 34-78 (155)
62 1vk6_A NADH pyrophosphatase; 1 96.0 0.0095 3.2E-07 53.4 6.2 50 94-145 141-193 (269)
63 1u20_A U8 snoRNA-binding prote 96.0 0.019 6.3E-07 48.7 7.7 121 83-219 25-165 (212)
64 3fjy_A Probable MUTT1 protein; 95.7 0.026 8.8E-07 51.2 7.7 54 103-163 35-89 (364)
65 2dsc_A ADP-sugar pyrophosphata 95.7 0.024 8.2E-07 47.6 6.8 109 92-220 62-184 (212)
66 1g0s_A Hypothetical 23.7 kDa p 95.4 0.021 7.1E-07 48.2 5.6 113 94-228 59-187 (209)
67 3kvh_A Protein syndesmos; NUDT 95.1 0.0072 2.5E-07 54.3 1.7 112 88-219 18-149 (214)
68 2xsq_A U8 snoRNA-decapping enz 94.9 0.018 6.3E-07 49.6 3.7 97 107-220 66-174 (217)
69 3o6z_A GDP-mannose pyrophospha 94.7 0.04 1.4E-06 45.6 5.3 104 95-220 48-167 (191)
70 3e57_A Uncharacterized protein 94.0 0.1 3.6E-06 45.7 6.6 65 89-163 65-144 (211)
71 2dho_A Isopentenyl-diphosphate 93.0 0.21 7.1E-06 43.5 6.8 58 87-146 54-127 (235)
72 3qsj_A Nudix hydrolase; struct 92.2 0.089 3E-06 46.4 3.4 56 90-145 7-89 (232)
73 2pny_A Isopentenyl-diphosphate 92.0 0.33 1.1E-05 42.7 6.8 59 87-147 65-139 (246)
74 3fsp_A A/G-specific adenine gl 91.2 0.18 6.1E-06 46.5 4.4 39 106-145 252-295 (369)
75 3q91_A Uridine diphosphate glu 90.2 0.37 1.3E-05 41.7 5.2 92 116-227 95-195 (218)
76 3rh7_A Hypothetical oxidoreduc 73.1 7.2 0.00025 35.8 6.7 66 87-167 179-245 (321)
77 3dup_A MUTT/nudix family prote 68.5 7.3 0.00025 35.7 5.6 60 87-146 113-180 (300)
78 2qlc_A DNA repair protein RADC 27.4 32 0.0011 27.8 2.3 37 87-141 61-97 (126)
No 1
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=100.00 E-value=9.6e-84 Score=572.44 Aligned_cols=190 Identities=55% Similarity=0.993 Sum_probs=179.9
Q ss_pred ccCCCeEEEeeCCceeeccCCCCcccCccHHHHHHHHHHHHhhccceeEEEEEEEEecCCCCeEEEeeecCceecCCCcc
Q 039176 45 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGR 124 (282)
Q Consensus 45 m~~~~~v~IYPLsNYtFgtKe~~~eKD~sv~~Rl~Rlk~~Y~k~GmRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGr 124 (282)
+..+++|+|||++||+||+||+++|||+|+++|++||+++|++.|||+||+|||+||+|+||||||+|.++++|+||||+
T Consensus 12 ~~~~~~~~iYplsnY~f~~k~~~~ekd~s~~~r~~rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~~~~f~LPGGk 91 (208)
T 3bho_A 12 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGE 91 (208)
T ss_dssp TTTCCEEEECBGGGEEEEEECCCCCSCSSHHHHHHHHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEETTEEECSEEE
T ss_pred ccccceEEEecccceeEccCCccccccccHHHHHHHHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcCCCcEECCCcc
Confidence 34467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCCCCCCCCCCCCCCcceeEEEEEEEccceeeEeeCC
Q 039176 125 LKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPK 204 (282)
Q Consensus 125 LrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~F~VPk 204 (282)
+++||++++||+|+|++.|+. +++...+|+||||||+|||||||+.+|||+||||||||||+|||+|+|||+|.|+|||
T Consensus 92 le~gE~~~eaL~REL~EELg~-~~~~~~~~eIge~lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vPk 170 (208)
T 3bho_A 92 LNPGEDEVEGLKRLMTEILGR-QDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPK 170 (208)
T ss_dssp CCTTCCHHHHHHHHHHHHHCC-CC-----CEEEEEEEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEET
T ss_pred cCCCCCHHHHHHHHHHHHhCC-CcCCCccEEEhheEEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEecCC
Confidence 999999999999999999997 5667789999999999999999999999999999999999999999999999999999
Q ss_pred CceEEeecchhhccccccccceeccccceee
Q 039176 205 NLKLLAVPLFELYDNVQIWASYFNHSSTAFQ 235 (282)
Q Consensus 205 N~KLlAVPLFELYdN~~~YGpiIsslp~~~~ 235 (282)
||||+||||||||||+++|||||||||+.+.
T Consensus 171 n~kL~AvPLfely~N~~~yG~~issiP~llS 201 (208)
T 3bho_A 171 NYKLVAAPLFELYDNAPGYGPIISSLPQLLS 201 (208)
T ss_dssp TCEEEEEEHHHHTTCHHHHHHHHTTHHHHHT
T ss_pred CCeEEeecHHhhhcchhhhchhhhhhhhhhh
Confidence 9999999999999999999999999999864
No 2
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=98.15 E-value=4.2e-06 Score=66.08 Aligned_cols=65 Identities=20% Similarity=0.313 Sum_probs=50.4
Q ss_pred ceeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 90 mRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
||+.+.|-.+|-.. -.|||+|..+..|.+|||.+.+||+..+++.|.+.+..|. +-++.+.++..
T Consensus 1 M~~~~aag~vv~~~--~~vLL~~r~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl-------~~~~~~~l~~~ 65 (134)
T 3i7u_A 1 MKKEFSAGGVLFKD--GEVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV-------KGEILDYIGEI 65 (134)
T ss_dssp CEEEEEEEEEEEET--TEEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred CccEEEEEEEEEEC--CEEEEEEeCCCcEECCeeEecCCCCHHHHHHHHHHHhcCc-------eEEEeeeeeee
Confidence 66755554444333 3799999988899999999999999999999999999985 23455666653
No 3
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=97.91 E-value=0.00012 Score=57.86 Aligned_cols=129 Identities=18% Similarity=0.203 Sum_probs=77.9
Q ss_pred HHHHHHHHHHhhccceeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeE
Q 039176 76 DRLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQ 155 (282)
Q Consensus 76 ~Rl~Rlk~~Y~k~GmRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~We 155 (282)
+-+..++.........+.+-+++++... -.|||.|.....|.||||.+.+||+..++++|.|.+.+|. +-.
T Consensus 5 ~~~~~~r~~~~~~~~~~~~v~~ii~~~~--~~vLL~~r~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~ 75 (153)
T 3eds_A 5 LYYKKIREQLGHELIFXPSVAAVIKNEQ--GEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGL-------KVQ 75 (153)
T ss_dssp HHHHHHHHHHTTSCEEEEEEEEEEBCTT--CCEEEECC---CBBCSEEECCTTSCHHHHHHHHHHHHHCE-------EEE
T ss_pred hHHHHHHHhcCCCcEEeeeEEEEEEcCC--CeEEEEEcCCCcEECCccccCCCCCHHHHHHHHHHHHHCc-------cce
Confidence 3456677777777777777777777644 3588877766789999999999999999999999999985 224
Q ss_pred eeeeeeeeeCCCCCCCCCCCCCCCCCCcceeEEEEEEEccceeeEeeC-CCceEEeecchhhcc
Q 039176 156 IGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVP-KNLKLLAVPLFELYD 218 (282)
Q Consensus 156 VGe~Lg~WWRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~F~VP-kN~KLlAVPLFELYd 218 (282)
+.+.++.+-.+.+ .|..++-........+|.+.+.......-+ ....+.-+|+=||-+
T Consensus 76 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 134 (153)
T 3eds_A 76 VKKQKGVFGGKEY-----RYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPP 134 (153)
T ss_dssp EEEEEEEECSGGG-----EEECTTSCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCC
T ss_pred eeeEEEEecccce-----eeecCCCCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCch
Confidence 4556665532221 111122222234556788876544321111 112455566655543
No 4
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=97.89 E-value=2.4e-05 Score=59.56 Aligned_cols=55 Identities=20% Similarity=0.303 Sum_probs=45.0
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecCc--eecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGNT--FCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~ns--ffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+++|.+|++....+..+|||.|.... .|.+|||.+.+||+..+++.|.+.+..|.
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 59 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANI 59 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCC
Confidence 45555565555455678999997643 89999999999999999999999999996
No 5
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=97.89 E-value=3e-05 Score=58.57 Aligned_cols=39 Identities=26% Similarity=0.510 Sum_probs=36.9
Q ss_pred eEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 107 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 107 HVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.|||.|.....|.+|||.+.+||+..+++.|.+.+.+|.
T Consensus 16 ~vLl~~r~~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl 54 (134)
T 2pbt_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred EEEEEEeCCCcEECCccccCCCCCHHHHHHHHHHHHHCC
Confidence 999999877899999999999999999999999999985
No 6
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=97.86 E-value=0.00014 Score=54.56 Aligned_cols=64 Identities=20% Similarity=0.246 Sum_probs=49.4
Q ss_pred ceeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 90 MRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 90 mRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
|..+|.+|++.+ .| +|||.|.....|.+|||.+.+||+..+++.|.+.+..|.. -.+.+.++..
T Consensus 1 m~~~~~~vi~~~-~~--~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~-------~~~~~~~~~~ 64 (126)
T 1vcd_A 1 MELGAGGVVFNA-KR--EVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEETGVR-------AEVLLPLYPT 64 (126)
T ss_dssp CEEEEEEEEECT-TS--CEEEEECTTSCEECCEECCCTTCCHHHHHHHHHHHHHCCE-------EEEEEEEEEE
T ss_pred CeeEEEEEEEcC-CC--EEEEEEECCCCccCCcCcCCCCCCHHHHHHHHHHHhhCcE-------eeeccEEeEE
Confidence 456676666543 33 8999998777899999999999999999999999999852 2344556654
No 7
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=97.79 E-value=3e-05 Score=60.35 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=44.6
Q ss_pred cceeEEEE--EEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCCCC
Q 039176 89 GMRTSVEA--ILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS 147 (282)
Q Consensus 89 GmRrSVeg--VLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~ 147 (282)
||++.+.+ |+..-..+-..|||.|.. +..|.+|||.+.+||+..++++|.+.+.+|...
T Consensus 1 gm~~~~~v~vvi~~~~~~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~ 62 (149)
T 3son_A 1 GMRQPFQVLVIPFIKTEANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDV 62 (149)
T ss_dssp ---CCCEEEEEEEEECSSSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCS
T ss_pred CCCCceEEEEEEEEecCCCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCc
Confidence 67766544 333334455689999976 478999999999999999999999999999743
No 8
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=97.69 E-value=0.00012 Score=58.09 Aligned_cols=60 Identities=30% Similarity=0.489 Sum_probs=46.5
Q ss_pred HHhhccceeEEEEEEEEecCCCCeEEEeeec-C-----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 84 NYMKEGMRTSVEAILLVQEHNHPHILLLQIG-N-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 84 ~Y~k~GmRrSVegVLLVH~h~hPHVLLLQ~~-n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.+.+.+|++.+-+++++... -.|||.|.. . ..|.+|||.+.+||+..+++.|.|.+.+|.
T Consensus 19 ~~~~~~~~~~~~~~~ii~~~--~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 84 (165)
T 3oga_A 19 YFQSNAMRQRTIVCPLIQND--GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGE 84 (165)
T ss_dssp -----CCEEEEEEEEEEEET--TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCS
T ss_pred cccCCCcceEEEEEEEEeCC--CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 34666888877777777654 479999865 2 479999999999999999999999999996
No 9
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=97.68 E-value=0.00031 Score=57.45 Aligned_cols=39 Identities=26% Similarity=0.426 Sum_probs=34.4
Q ss_pred eEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 107 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 107 HVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.|||+|.....|.||||.+.+||+..++++|.+.+.+|.
T Consensus 28 ~vLL~~r~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 66 (163)
T 3f13_A 28 GVLVTASRGGRYNLPGGKANRGELRSQALIREIREETGL 66 (163)
T ss_dssp EEEEEECC---BBCSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEECCCeEECCceeCCCCCCHHHHHHHHHHHHHCc
Confidence 699999888899999999999999999999999999996
No 10
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=97.56 E-value=0.00015 Score=59.31 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=53.3
Q ss_pred eEEEEEEEEecCC----CCeEEEeeec-----------CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEe
Q 039176 92 TSVEAILLVQEHN----HPHILLLQIG-----------NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQI 156 (282)
Q Consensus 92 rSVegVLLVH~h~----hPHVLLLQ~~-----------nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeV 156 (282)
-+|.+|++....+ -..|||.|.. ...|.||||.+.+||+..++++|.+.+..|... .+
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~-------~~ 100 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTD-------IP 100 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCS-------CC
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCC-------cc
Confidence 7888888886655 5789999982 358999999999999999999999999999632 23
Q ss_pred eeeeeeeeC
Q 039176 157 GECVAIWWR 165 (282)
Q Consensus 157 Ge~Lg~WWR 165 (282)
.+.++.+-.
T Consensus 101 ~~~l~~~~~ 109 (187)
T 3i9x_A 101 LIPFGVFDK 109 (187)
T ss_dssp CEEEEEECC
T ss_pred eEEEEEEcC
Confidence 456666543
No 11
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=97.55 E-value=0.00039 Score=55.32 Aligned_cols=79 Identities=27% Similarity=0.475 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhccceeEEEEEEEEecCCCCeEEEeeec--CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCe
Q 039176 77 RLARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIG--NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDW 154 (282)
Q Consensus 77 Rl~Rlk~~Y~k~GmRrSVegVLLVH~h~hPHVLLLQ~~--nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~W 154 (282)
++......+...-++..|.+|++ +. ..|||.|.. ...|.+|||.+.+||+..++++|.+.+.+|.. -
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~ii~-~~---~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~-------~ 77 (171)
T 3id9_A 9 KFNRKRRLYIENIMQVRVTGILI-ED---EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLE-------V 77 (171)
T ss_dssp -------------CEEEEEEEEE-ET---TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCC-------E
T ss_pred ccChhhhhccCCceEEEEEEEEE-EC---CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCc-------c
Confidence 34444455555667777766665 32 589999876 46899999999999999999999999999962 3
Q ss_pred EeeeeeeeeeCC
Q 039176 155 QIGECVAIWWRP 166 (282)
Q Consensus 155 eVGe~Lg~WWRP 166 (282)
.+.+.++.+..+
T Consensus 78 ~~~~~~~~~~~~ 89 (171)
T 3id9_A 78 KIKKLLYVCDKP 89 (171)
T ss_dssp EEEEEEEEEEET
T ss_pred ccceEEEEEccc
Confidence 566777766433
No 12
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=97.52 E-value=0.00023 Score=62.01 Aligned_cols=73 Identities=23% Similarity=0.266 Sum_probs=58.5
Q ss_pred ceeEEEEEEEEecCCCCeEEEeeecC----ceecCCCccccC--CCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 90 MRTSVEAILLVQEHNHPHILLLQIGN----TFCKLPGGRLKP--GENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 90 mRrSVegVLLVH~h~hPHVLLLQ~~n----sffkLPGGrLrp--gE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
..-+|.+||++-..+-.+|||.|... ..|.||||.+.+ ||+..+++.|.|.+..|... ...+.++.+
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~-------~~~~~l~~~ 93 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVP-------PYIEQLCTV 93 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCC-------SEEEEEEEE
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCC-------CceeeEEEe
Confidence 45788899987666778999999764 479999999999 99999999999999999622 345677777
Q ss_pred eCCCCC
Q 039176 164 WRPNFE 169 (282)
Q Consensus 164 WRPnFE 169 (282)
.-|..+
T Consensus 94 ~~~~r~ 99 (240)
T 3gz5_A 94 GNNSRD 99 (240)
T ss_dssp EESSSS
T ss_pred CCCccC
Confidence 665443
No 13
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=97.50 E-value=0.00012 Score=61.55 Aligned_cols=73 Identities=19% Similarity=0.369 Sum_probs=57.2
Q ss_pred HHhhccceeEEEEEEEEecCCCCeEEEeeec--CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeee
Q 039176 84 NYMKEGMRTSVEAILLVQEHNHPHILLLQIG--NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA 161 (282)
Q Consensus 84 ~Y~k~GmRrSVegVLLVH~h~hPHVLLLQ~~--nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg 161 (282)
.|...|.+.+|.+|++.. .+--.|||.|.. ...|.||||.+.+||+..++++|.+.|.+|- +-.+.++++
T Consensus 33 ~~~~~~~~~~~~~vi~~~-~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl-------~~~~~~~l~ 104 (194)
T 2fvv_A 33 TYDGDGYKKRAACLCFRS-ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGV-------KGTLGRLVG 104 (194)
T ss_dssp CBCTTSCEEEEEEEEESS-TTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCE-------EEEEEEEEE
T ss_pred ccccCCccccEEEEEEEE-CCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCC-------ccccceEEE
Confidence 456678888888777633 234589998864 4689999999999999999999999999995 234566788
Q ss_pred eee
Q 039176 162 IWW 164 (282)
Q Consensus 162 ~WW 164 (282)
.+.
T Consensus 105 ~~~ 107 (194)
T 2fvv_A 105 IFE 107 (194)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 14
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=97.50 E-value=0.00016 Score=57.08 Aligned_cols=52 Identities=19% Similarity=0.182 Sum_probs=42.5
Q ss_pred eeEEEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
++.+.++++++ . -.|||.|.. ...|.||||.+.+||+..++++|.|.+.+|.
T Consensus 5 ~~~~v~~vi~~-~--~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 57 (159)
T 3f6a_A 5 RHFTVSVFIVC-K--DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGL 57 (159)
T ss_dssp SCEEEEEEEEE-T--TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEE-C--CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCC
Confidence 34444555555 3 389999976 4689999999999999999999999999996
No 15
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=97.48 E-value=0.0011 Score=51.90 Aligned_cols=104 Identities=23% Similarity=0.315 Sum_probs=66.5
Q ss_pred cceeEEEEEEEEecCCCCeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeee
Q 039176 89 GMRTSVEAILLVQEHNHPHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164 (282)
Q Consensus 89 GmRrSVegVLLVH~h~hPHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WW 164 (282)
.+.+.|.+|+ ++.. -+|||.|... ..|.+|||.+.+||+..++++|.+.+..|. +-.+.+.++...
T Consensus 18 ~~~~~v~~~i-~~~~--~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl-------~~~~~~~~~~~~ 87 (156)
T 3gg6_A 18 NVCYVVLAVF-LSEQ--DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL-------HCEPETLLSVEE 87 (156)
T ss_dssp TCEEEEEEEC-BCTT--SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCE-------EEEEEEEEEEEE
T ss_pred ceEEEEEEEE-EeCC--CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCc-------eeEeeeEEEEEc
Confidence 4444454444 4433 4899998764 589999999999999999999999999995 234566777654
Q ss_pred CCCCCCCCCCCCCCCCCCcceeEEEEEEEccceeeEee----CCCceEEeecchhhcc
Q 039176 165 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAV----PKNLKLLAVPLFELYD 218 (282)
Q Consensus 165 RPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~F~V----PkN~KLlAVPLFELYd 218 (282)
.. +..+..+|++.+.....-.. .....+.-+|+=||-+
T Consensus 88 ~~----------------~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 129 (156)
T 3gg6_A 88 RG----------------PSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPT 129 (156)
T ss_dssp SS----------------TTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCS
T ss_pred CC----------------CCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcc
Confidence 21 11245578777654332111 1223555666666544
No 16
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=97.47 E-value=0.00023 Score=55.40 Aligned_cols=103 Identities=18% Similarity=0.214 Sum_probs=65.2
Q ss_pred EEEEEEEEecCCCCeEEEeee---cCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCC
Q 039176 93 SVEAILLVQEHNHPHILLLQI---GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFE 169 (282)
Q Consensus 93 SVegVLLVH~h~hPHVLLLQ~---~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFE 169 (282)
.+.+.+++... -+|||.|. +...|.+|||.+.+||+..++++|.+.+..|...+ +.+.++..- |
T Consensus 5 ~~~v~~ii~~~--~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~-------~~~~~~~~~---~- 71 (153)
T 3shd_A 5 HVTVACVVHAE--GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQ-------PQHFIRMHQ---W- 71 (153)
T ss_dssp EEEEEEEEEET--TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCC-------CCEEEEEEE---E-
T ss_pred ceEEEEEEEeC--CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccc-------cCcEEEEEE---E-
Confidence 34433444433 48999986 34579999999999999999999999999996432 233444431 0
Q ss_pred CCCCCCCCCCCCCcceeEEEEEEEccceeeEee--CCCceEEeecchhh
Q 039176 170 TIMYPYCPPHITKPKECKKLFLVHLSEREYFAV--PKNLKLLAVPLFEL 216 (282)
Q Consensus 170 t~~YPYlPpHITkPKE~kKLylV~LPEk~~F~V--PkN~KLlAVPLFEL 216 (282)
.+| ..-..+..+|.+.+........ .....+.-+|+=|+
T Consensus 72 --~~~------~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 72 --IAP------DKTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp --CCT------TSCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred --ecC------CCceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh
Confidence 111 1123445678888876543222 13345667788777
No 17
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=97.43 E-value=0.00037 Score=60.00 Aligned_cols=69 Identities=20% Similarity=0.194 Sum_probs=55.1
Q ss_pred cceeEEEEEEEEecCCCCeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeee
Q 039176 89 GMRTSVEAILLVQEHNHPHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 164 (282)
Q Consensus 89 GmRrSVegVLLVH~h~hPHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WW 164 (282)
-.+-+|.+||+.-..+-..|||.|... ..|.||||.+.+||+..+++.|.|.|..|... ...+.++.+.
T Consensus 11 ~p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~-------~~~~~l~~~~ 83 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLEN-------VYMEQVGAFG 83 (226)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCS-------CEEEEEEEEC
T ss_pred CCeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCC-------CceEEEEEeC
Confidence 346788888887666678999999764 47999999999999999999999999999632 2345666654
No 18
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=97.43 E-value=0.00023 Score=56.30 Aligned_cols=51 Identities=25% Similarity=0.511 Sum_probs=42.9
Q ss_pred EEEEEEe-------cCCCCeEEEeeecC--ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 95 EAILLVQ-------EHNHPHILLLQIGN--TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 95 egVLLVH-------~h~hPHVLLLQ~~n--sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.|+|+.. .++-.-|||+|... .+|.||||.+.+||+..+++.|.+.+..|.
T Consensus 6 ~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl 65 (155)
T 3u53_A 6 CGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGI 65 (155)
T ss_dssp EEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCC
Confidence 4666654 36677899999763 479999999999999999999999999996
No 19
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=97.42 E-value=0.00039 Score=53.29 Aligned_cols=89 Identities=21% Similarity=0.268 Sum_probs=58.0
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt 170 (282)
+.+|.+||+.. +...|||.|.....|.+|||.+.+||+..+++.|.+.+..|. +-.+.++++..= .
T Consensus 18 ~~~~~~vi~~~--~~~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~~-----~ 83 (148)
T 2azw_A 18 RYAAYIIVSKP--ENNTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGI-------SVEIGCYLGEAD-----E 83 (148)
T ss_dssp CCEEEEECEEG--GGTEEEEEECTTSCEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEE-----E
T ss_pred eeEEEEEEECC--CCCeEEEEEcCCCCEeCCCcccCCCCCHHHHHHHHHHHHhCC-------eeEeeeEEEEEE-----E
Confidence 34455554432 235899999777899999999999999999999999999985 223445555431 0
Q ss_pred CCCCCCCCCC-CCcceeEEEEEEEccc
Q 039176 171 IMYPYCPPHI-TKPKECKKLFLVHLSE 196 (282)
Q Consensus 171 ~~YPYlPpHI-TkPKE~kKLylV~LPE 196 (282)
..| ++|. +.-.+...+|.++...
T Consensus 84 ~~~---~~~~~~~~~~~~~~~~~~~~~ 107 (148)
T 2azw_A 84 YFY---SNHRQTAYYNPGYFYVANTWR 107 (148)
T ss_dssp EEE---ETTTTEEEEEEEEEEEEEEEE
T ss_pred EEc---CCCCCcceEEEEEEEEEEcCc
Confidence 111 1222 2234556677777643
No 20
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=97.41 E-value=0.0009 Score=51.33 Aligned_cols=87 Identities=17% Similarity=0.309 Sum_probs=58.5
Q ss_pred ceeEEEEEEEEec-CCCCeEEEeeecC--ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCC
Q 039176 90 MRTSVEAILLVQE-HNHPHILLLQIGN--TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRP 166 (282)
Q Consensus 90 mRrSVegVLLVH~-h~hPHVLLLQ~~n--sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRP 166 (282)
.+.+|.+|++... .|..+|||.|... ..|.+|||.+.+||+..++++|.+.+.+|.. -.+.++++.+-.|
T Consensus 8 p~~~v~~vi~~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~-------~~~~~~~~~~~~~ 80 (139)
T 2yyh_A 8 PLLATDVIIRLWDGENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLE-------VRLHKLMGVYSDP 80 (139)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCC-------CEEEEEEEEECCT
T ss_pred CeEEEEEEEEEEcCCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCC-------cccceEEEEECCC
Confidence 4567777776532 2222389888653 3599999999999999999999999999952 2456677765333
Q ss_pred CCCCCCCCCCCCCCCCcceeEEEEEEEc
Q 039176 167 NFETIMYPYCPPHITKPKECKKLFLVHL 194 (282)
Q Consensus 167 nFEt~~YPYlPpHITkPKE~kKLylV~L 194 (282)
..+ + .-.....+|.++.
T Consensus 81 ~~~--------~---~~~~~~~~f~~~~ 97 (139)
T 2yyh_A 81 ERD--------P---RAHVVSVVWIGDA 97 (139)
T ss_dssp TSC--------T---TSCEEEEEEEEEE
T ss_pred CcC--------C---CceEEEEEEEEec
Confidence 221 1 1233456788776
No 21
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=97.38 E-value=0.00028 Score=53.81 Aligned_cols=52 Identities=19% Similarity=0.369 Sum_probs=40.8
Q ss_pred eEEEEEEEEecCCCCeEEEeeecC--ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 92 TSVEAILLVQEHNHPHILLLQIGN--TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 92 rSVegVLLVH~h~hPHVLLLQ~~n--sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.+|.+|++.... -.|||.|... ..|.+|||.+.+||+..+++.|.+.+.+|.
T Consensus 10 ~~v~~~i~~~~~--~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 63 (150)
T 2o1c_A 10 VSILVVIYAQDT--KRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTI 63 (150)
T ss_dssp EEEEEEEEETTT--CEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEeCCC--CEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 345544443222 4799988763 689999999999999999999999999986
No 22
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=97.34 E-value=0.00046 Score=53.17 Aligned_cols=72 Identities=24% Similarity=0.390 Sum_probs=51.1
Q ss_pred CeEEEeeecC-------ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCCCCCCCCCC
Q 039176 106 PHILLLQIGN-------TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPP 178 (282)
Q Consensus 106 PHVLLLQ~~n-------sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt~~YPYlPp 178 (282)
-.|||.|... ..|.+|||.+.+||+..+++.|.+.+.+|. +-...+.++..- -.| +
T Consensus 17 ~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl-------~~~~~~~~~~~~-~~~---------~ 79 (140)
T 3gwy_A 17 EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDY-------VIEVGEKLLTVH-HTY---------P 79 (140)
T ss_dssp TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCC-------CEEEEEEEEEEE-CCC---------S
T ss_pred CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCc-------EEEeceEEEEEE-EEe---------C
Confidence 4799998742 369999999999999999999999999985 234556666642 111 1
Q ss_pred CCCCcceeEEEEEEEccce
Q 039176 179 HITKPKECKKLFLVHLSER 197 (282)
Q Consensus 179 HITkPKE~kKLylV~LPEk 197 (282)
| -.....+|.+.+...
T Consensus 80 ~---~~~~~~~f~~~~~~~ 95 (140)
T 3gwy_A 80 D---FEITMHAFLCHPVGQ 95 (140)
T ss_dssp S---CCEEEEEEEEEECCS
T ss_pred C---ceEEEEEEEEEecCC
Confidence 2 234567888887654
No 23
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=97.31 E-value=0.00066 Score=52.79 Aligned_cols=56 Identities=23% Similarity=0.302 Sum_probs=44.9
Q ss_pred ccceeEEEEEEEEecCCCCeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCCC
Q 039176 88 EGMRTSVEAILLVQEHNHPHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 88 ~GmRrSVegVLLVH~h~hPHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
...+.+|.+|++- . .-+|||.|... ..|.+|||.+.+||+..+++.|.+.+.+|..
T Consensus 15 ~~~~~~v~~vi~~-~--~~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~ 74 (160)
T 1rya_A 15 STPLVSLDFIVEN-S--RGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLR 74 (160)
T ss_dssp HSCEEEEEEEEEC-T--TSCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEEEEEEc-C--CCEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 4456677766653 2 34799988764 5899999999999999999999999999963
No 24
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=97.29 E-value=0.00044 Score=53.41 Aligned_cols=62 Identities=21% Similarity=0.350 Sum_probs=46.0
Q ss_pred EEEEEEEEecCCCCeEEEeeecC-c---eecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 93 SVEAILLVQEHNHPHILLLQIGN-T---FCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 93 SVegVLLVH~h~hPHVLLLQ~~n-s---ffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
.+.+++++... -+|||.|... . .|.+|||.+.+||+..++++|.+.+.+|. +-.+.+.++.+
T Consensus 8 ~~~v~~ii~~~--~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl-------~~~~~~~~~~~ 73 (153)
T 2b0v_A 8 NVTVAAVIEQD--DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGH-------SFLPEVLTGIY 73 (153)
T ss_dssp EEEEEEECEET--TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSE-------EEEEEEEEEEE
T ss_pred CEEEEEEEeeC--CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCc-------EeccceEEEEE
Confidence 34444444443 3799988653 2 79999999999999999999999999995 23455667664
No 25
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=97.28 E-value=0.0011 Score=51.58 Aligned_cols=87 Identities=18% Similarity=0.302 Sum_probs=58.5
Q ss_pred ceeEEEEEEEEecCCCCeEEEeeecC--------ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeee
Q 039176 90 MRTSVEAILLVQEHNHPHILLLQIGN--------TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVA 161 (282)
Q Consensus 90 mRrSVegVLLVH~h~hPHVLLLQ~~n--------sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg 161 (282)
+.+...+++++... -.|||.|... ..|.+|||.+.+||+..+++.|.+.+.+|.. -...++++
T Consensus 11 ~~~~~~~~vi~~~~--~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~-------~~~~~~l~ 81 (159)
T 1sjy_A 11 VELRAAGVVLLNER--GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLR-------VRPVKFLG 81 (159)
T ss_dssp CCEEEEEEEEBCTT--CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCC-------EEEEEEEE
T ss_pred eEEEeEEEEEEeCC--CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCcc-------ceeeEEEE
Confidence 33444455555443 3688888652 5799999999999999999999999999962 23455676
Q ss_pred eeeCCCCCCCCCCCCCCCCCCcceeEEEEEEEccce
Q 039176 162 IWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSER 197 (282)
Q Consensus 162 ~WWRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk 197 (282)
.+.-+ | | |- -.....+|.+.++..
T Consensus 82 ~~~~~-~-----~----~~--~~~~~~~f~~~~~~~ 105 (159)
T 1sjy_A 82 AYLGR-F-----P----DG--VLILRHVWLAEPEPG 105 (159)
T ss_dssp EEEEE-C-----T----TS--CEEEEEEEEEEECSS
T ss_pred EEecc-c-----C----CC--ceEEEEEEEEEccCC
Confidence 65422 1 1 11 345667888877543
No 26
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=97.26 E-value=0.00039 Score=56.89 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=73.8
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeec------CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeee
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIG------NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECV 160 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~------nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~L 160 (282)
+.|.++.+-+|++ ...|-++|||.|.. ...|.+|||.+.+||+..++..|.+.|..|...+ ..+.+
T Consensus 30 ~~~~~~~~~~v~i-~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-------~~~~l 101 (194)
T 1nqz_A 30 LPHYRRAAVLVAL-TREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPA-------AVTLL 101 (194)
T ss_dssp ---CEEEEEEEEE-ESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGG-------GCEEE
T ss_pred CCCCceEEEEEEE-ecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCcc-------ceEEE
Confidence 3477777777766 55666799999864 2478999999999999999999999999996321 23345
Q ss_pred eeeeCCCCCCCCCCCCCCCCCCcceeEEEEEEEccceee-EeeCCC--ceEEeecchhh-cccc
Q 039176 161 AIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREY-FAVPKN--LKLLAVPLFEL-YDNV 220 (282)
Q Consensus 161 g~WWRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~-F~VPkN--~KLlAVPLFEL-YdN~ 220 (282)
+...- .+ . ...+...+|++.++.... ...+.+ ..+.-+|+=|| -++.
T Consensus 102 ~~~~~-~~---------~---~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 102 GELDD-VF---------T---PVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EECCC-EE---------E---TTTEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEccC-cc---------C---CCCeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCC
Confidence 54321 11 1 113566788888764332 223322 36777888888 5553
No 27
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=97.24 E-value=0.00093 Score=53.56 Aligned_cols=58 Identities=19% Similarity=0.320 Sum_probs=46.4
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeecC------ceecC-CCccccCCCChHHHHHHHHHhhhCCC
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIGN------TFCKL-PGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~n------sffkL-PGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
+.|..+.+.+|+++...| .|||.+... ..|.+ |||.+.+||+..+++.|.+.+.+|..
T Consensus 32 ~~~~~~~~~~v~i~~~~~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~ 96 (180)
T 2fkb_A 32 AQCLRHRATYIVVHDGMG--KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIA 96 (180)
T ss_dssp HHTCCEEEEEEEEECSSS--CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCB
T ss_pred ccCceeeEEEEEEECCCC--EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 467777777888776555 577766542 24889 99999999999999999999999963
No 28
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=97.22 E-value=0.00081 Score=59.59 Aligned_cols=57 Identities=23% Similarity=0.368 Sum_probs=48.9
Q ss_pred cceeEEEEEEEEecCC--CCeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 89 GMRTSVEAILLVQEHN--HPHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 89 GmRrSVegVLLVH~h~--hPHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
-..-+|.+|+++...+ -.+|||++... ..|.||||.+.+||+..++..|.|.+..|.
T Consensus 37 ~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl 99 (273)
T 2fml_A 37 KPSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGV 99 (273)
T ss_dssp CCEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CCceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCC
Confidence 3456899999886655 67999999764 479999999999999999999999999995
No 29
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=97.20 E-value=0.0018 Score=54.40 Aligned_cols=107 Identities=21% Similarity=0.261 Sum_probs=67.3
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt 170 (282)
+.+|.+|++ +. -+|||.|.....|.+|||.+.+||+..++..|.+.+..|. +-...+.++.+-.+....
T Consensus 70 ~~~v~~vv~-~~---~~vLLvrr~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~~~~~~~l~~~~~~~~~~ 138 (206)
T 3o8s_A 70 KLDTRAAIF-QE---DKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGL-------DVEAQRVVAILDKHKNNP 138 (206)
T ss_dssp EEEEEEEEE-ET---TEEEEEECTTSCEECSEEECCTTSCHHHHHHHHHHHHHCE-------EEEEEEEEEEEEHHHHCC
T ss_pred CccEEEEEE-EC---CEEEEEEecCCeEECCeeccCCCCCHHHHHHHHHHHHHCC-------cceeeeEEEEEeccccCC
Confidence 445655554 42 5999999877789999999999999999999999999985 234566777765332221
Q ss_pred CCCCCCCCCCCCcceeEEEEEEEccceeeEee-CCCceEEeecchhhc
Q 039176 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAV-PKNLKLLAVPLFELY 217 (282)
Q Consensus 171 ~~YPYlPpHITkPKE~kKLylV~LPEk~~F~V-PkN~KLlAVPLFELY 217 (282)
..++ -..+..+|.+.+.... +.. +....+.-+|+=||-
T Consensus 139 ~~~~--------~~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~ 177 (206)
T 3o8s_A 139 AKSA--------HRVTKVFILCRLLGGE-FQPNSETVASGFFSLDDLP 177 (206)
T ss_dssp -------------CEEEEEEEEEEEEEC-CCCCSSCSEEEEECTTSCC
T ss_pred CCCC--------ceEEEEEEEEEecCCe-ecCCCCceEEEEEeHHHhh
Confidence 1111 1224556777765432 211 223445555655543
No 30
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=97.20 E-value=0.0034 Score=49.81 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=40.9
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecC------ceec-CCCccccCCCChHHHHHHHHHhhhCCCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGN------TFCK-LPGGRLKPGENEIEGLKRKLTSKLGANS 147 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~n------sffk-LPGGrLrpgE~eieGLKRkL~~~L~~~~ 147 (282)
.++|. |+++...| +|||.|... ..|. +|||.+.+||+..++++|.+.+.+|...
T Consensus 34 ~~~v~-v~i~~~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~ 94 (171)
T 1q27_A 34 VRVVN-AFLRNSQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEI 94 (171)
T ss_dssp CEEEE-EEEEETTT--EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTT
T ss_pred ceEEE-EEEECCCC--eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcc
Confidence 44444 44444444 899888632 4677 9999999999999999999999999643
No 31
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=97.18 E-value=0.00053 Score=56.92 Aligned_cols=62 Identities=23% Similarity=0.350 Sum_probs=46.4
Q ss_pred eEEEEEEEEecCCCCeEEEeeecC---ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeee
Q 039176 92 TSVEAILLVQEHNHPHILLLQIGN---TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAI 162 (282)
Q Consensus 92 rSVegVLLVH~h~hPHVLLLQ~~n---sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~ 162 (282)
.+|.++++.... ..|||.|... ..|.||||.+.+||+..++..|.+.|..|.. -.+.++++.
T Consensus 27 v~v~~~v~~~~~--~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~-------~~~~~l~~~ 91 (199)
T 3h95_A 27 VGVAGAVFDEST--RKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIK-------SEFRSVLSI 91 (199)
T ss_dssp CEEEEEEEETTT--TEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCC-------EEEEEEEEE
T ss_pred ceEEEEEEeCCC--CEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCc-------cccceEEEE
Confidence 344444443322 4899999765 5899999999999999999999999999962 235556654
No 32
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=97.18 E-value=0.00063 Score=52.84 Aligned_cols=54 Identities=22% Similarity=0.375 Sum_probs=43.9
Q ss_pred cceeEEEEEEEEecCCCCeEEEeeecC--ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 89 GMRTSVEAILLVQEHNHPHILLLQIGN--TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 89 GmRrSVegVLLVH~h~hPHVLLLQ~~n--sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+.|.+|.++++ ... -.|||.|... ..|.+|||.+.+||+..++..|.+.+..|.
T Consensus 12 ~~~~~v~~~i~-~~~--~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 12 GYRRNVGICLM-NND--KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGV 67 (165)
T ss_dssp SCCCEEEEEEE-CTT--SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ceeeeEEEEEE-CCC--CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCC
Confidence 45677766555 433 3799988763 589999999999999999999999999996
No 33
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=97.18 E-value=0.00059 Score=53.48 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=39.6
Q ss_pred EEEEEEEEecCCCCeEEEeee-cC----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 93 SVEAILLVQEHNHPHILLLQI-GN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 93 SVegVLLVH~h~hPHVLLLQ~-~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
..-+|+++...| +|||++. .. ..|.+|||.+.+||+..++++|.|.|.+|-
T Consensus 6 ~~v~vi~~~~~~--~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl 61 (145)
T 2w4e_A 6 RAVFILPVTAQG--EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGG 61 (145)
T ss_dssp EEEEEEEEETTS--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CEEEEEEEcCCC--EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCC
Confidence 344555565555 5877753 22 279999999999999999999999999995
No 34
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=97.18 E-value=0.0008 Score=52.57 Aligned_cols=53 Identities=32% Similarity=0.490 Sum_probs=41.4
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecC------ceecCCCccccCCCChHHHHHHHHHhhhCCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGN------TFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~n------sffkLPGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
+.+|.+|+ +... -.|||.|... ..|.+|||.+.+||+..+++.|.+.+.+|..
T Consensus 8 ~~~v~~vi-~~~~--~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~ 66 (153)
T 3grn_A 8 IISVYALI-RNEK--GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGIT 66 (153)
T ss_dssp EEEEEEEE-ECTT--CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCC
T ss_pred EEEEEEEE-EcCC--CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcE
Confidence 34444444 3333 3799998763 5899999999999999999999999999963
No 35
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=97.18 E-value=0.00091 Score=50.74 Aligned_cols=39 Identities=33% Similarity=0.590 Sum_probs=34.9
Q ss_pred eEEEeeecC-----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 107 HILLLQIGN-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 107 HVLLLQ~~n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+|||.|... ..|.+|||.+.+||+..+++.|.+.+.++.
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl 64 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGI 64 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCE
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCC
Confidence 799988742 589999999999999999999999999885
No 36
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.00048 Score=53.13 Aligned_cols=52 Identities=25% Similarity=0.436 Sum_probs=41.7
Q ss_pred EEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCCC
Q 039176 94 VEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 94 VegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
+.++++++.. -.+|||.|.. ...|.+|||.+.+||+..+++.|.+.+.+|..
T Consensus 6 ~~~~~i~~~~-~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~ 58 (146)
T 2jvb_A 6 VRGAAIFNEN-LSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFD 58 (146)
T ss_dssp CEEEEEBCTT-SSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCC
T ss_pred EEEEEEEeCC-CCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCC
Confidence 3445555432 2589999876 56899999999999999999999999999963
No 37
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=97.14 E-value=0.00082 Score=55.53 Aligned_cols=55 Identities=11% Similarity=0.227 Sum_probs=43.7
Q ss_pred eeEEEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
++-+.++++++.. ...|||+|.. ...|.+|||.+.+||+..++.+|.+.+..|..
T Consensus 44 ~h~~~~~vv~~~~-~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~ 99 (197)
T 3fcm_A 44 AHLTSSAFAVNKE-RNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVK 99 (197)
T ss_dssp EEEEEEEEEECTT-SCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCS
T ss_pred ccEEEEEEEEECC-CCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCC
Confidence 3345555555543 3589999876 56899999999999999999999999999963
No 38
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=97.13 E-value=0.0007 Score=53.93 Aligned_cols=54 Identities=19% Similarity=0.288 Sum_probs=40.8
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecCcee----cCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGNTFC----KLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~nsff----kLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.+.+-++++.+. +-..|||.|.....+ .||||.+.+||+..+++.|.|.+..|.
T Consensus 9 ~~~~v~~vi~~~-~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 66 (161)
T 3exq_A 9 VELVTMVMVTDP-ETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGL 66 (161)
T ss_dssp EEEEEEEEEBCT-TTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEeC-CCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCc
Confidence 334444444443 224899998765444 499999999999999999999999996
No 39
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=97.13 E-value=0.00039 Score=54.24 Aligned_cols=52 Identities=15% Similarity=0.267 Sum_probs=43.3
Q ss_pred cceeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 89 GMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 89 GmRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.++.+|.+|++- . ..|||.|. ...|.+|||.+.+||+..++++|.+.+.+|.
T Consensus 17 ~~~~~~~~ii~~--~--~~vLl~~r-~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl 68 (154)
T 2pqv_A 17 VFGVRATALIVQ--N--HKLLVTKD-KGKYYTIGGAIQVNESTEDAVVREVKEELGV 68 (154)
T ss_dssp EEEEEEEECCEE--T--TEEEEEEE-TTEEECEEEECBTTCCHHHHHHHHHHHHHCC
T ss_pred eEeEEEEEEEEE--C--CEEEEEec-CCeEECcccCcCCCCCHHHHHHHHHHHHhCC
Confidence 445666666652 2 47999888 6789999999999999999999999999996
No 40
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=97.10 E-value=0.00076 Score=55.88 Aligned_cols=52 Identities=29% Similarity=0.535 Sum_probs=42.3
Q ss_pred ceeEEEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 90 MRTSVEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 90 mRrSVegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
|.+.|.+|+ .+. ..|||+|.. ...|.+|||.+.+||+..+++.|.+.+..|.
T Consensus 3 ~~~v~~~vi-~~~---~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl 55 (188)
T 3fk9_A 3 LQRVTNCIV-VDH---DQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGI 55 (188)
T ss_dssp CCEEEEEEE-EET---TEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred ceEEEEEEE-EEC---CEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCC
Confidence 455554444 443 489999975 5689999999999999999999999999996
No 41
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=97.09 E-value=0.00077 Score=54.43 Aligned_cols=54 Identities=20% Similarity=0.429 Sum_probs=43.5
Q ss_pred cceeEEEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 89 GMRTSVEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 89 GmRrSVegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+.|.+|.+|++-+ .| .|||.|.. ...|.+|||.+.+||+..++..|.+.+.+|.
T Consensus 6 ~~~~~v~~~i~~~-~~--~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~ 60 (164)
T 2kdv_A 6 GYRPNVGIVICNR-QG--QVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL 60 (164)
T ss_dssp SEEEEEEEEEECT-TS--EEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCCcEEEEEEEcc-CC--EEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCC
Confidence 4566666655433 33 78888865 4689999999999999999999999999996
No 42
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=97.09 E-value=0.0009 Score=51.15 Aligned_cols=50 Identities=36% Similarity=0.604 Sum_probs=39.7
Q ss_pred EEEEEEEecCCCCeEEEeeecC-----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 94 VEAILLVQEHNHPHILLLQIGN-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 94 VegVLLVH~h~hPHVLLLQ~~n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+.+++++... -.|||.|... ..|.+|||.+.+||+..+++.|.+.+.+|.
T Consensus 10 ~~~~vi~~~~--~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl 64 (144)
T 3r03_A 10 VTAAALIDPD--GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGV 64 (144)
T ss_dssp EEEEEEBCTT--SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEcCC--CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCc
Confidence 3344444433 3699988763 479999999999999999999999999986
No 43
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=97.08 E-value=0.001 Score=51.01 Aligned_cols=50 Identities=34% Similarity=0.494 Sum_probs=40.7
Q ss_pred EEEEEEEEecCCCCeEEEeeecC-----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 93 SVEAILLVQEHNHPHILLLQIGN-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 93 SVegVLLVH~h~hPHVLLLQ~~n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.|.++++.+. -+|||.|... ..|.+|||.+.+||+..+++.|.+.+..|.
T Consensus 23 ~~~~~i~~~~---~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl 77 (153)
T 3ees_A 23 PVVAGFLRKD---GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGI 77 (153)
T ss_dssp EEEEEEEEET---TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred EEEEEEEEEC---CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCC
Confidence 4444444443 4899998763 589999999999999999999999999986
No 44
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=97.07 E-value=0.00089 Score=52.10 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=37.4
Q ss_pred eeEEEEEEEEecCCCCeEEEeeecCc---eecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIGNT---FCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~ns---ffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+.+|.+|+.-...+-.+||+.+.... -|.+|||.+.+||+..+++.|.+.+.+|.
T Consensus 8 ~~~~~~ii~~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl 65 (155)
T 2b06_A 8 ILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGL 65 (155)
T ss_dssp EEEEEEEEEETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSE
T ss_pred EEEEEEEEEECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCc
Confidence 33444444332223355777765432 25899999999999999999999999985
No 45
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=97.05 E-value=0.0009 Score=52.91 Aligned_cols=49 Identities=24% Similarity=0.471 Sum_probs=40.1
Q ss_pred EEEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 93 SVEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 93 SVegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+|.||++ + . -.|||.|.. ...|.+|||.+.+||+..+++.|.+.+..|.
T Consensus 3 ~~~~vi~-~-~--~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl 52 (156)
T 1k2e_A 3 VTSGVLV-E-N--GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGI 52 (156)
T ss_dssp EEEEECE-E-T--TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred EEEEEEE-E-C--CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCC
Confidence 4555544 4 2 479998876 4689999999999999999999999999985
No 46
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=97.04 E-value=0.001 Score=54.25 Aligned_cols=40 Identities=25% Similarity=0.334 Sum_probs=35.7
Q ss_pred CeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 106 PHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 106 PHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
-.|||.|... ..|.+|||.+.+||+..++++|.+.+.+|.
T Consensus 36 ~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl 79 (176)
T 3q93_A 36 QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL 79 (176)
T ss_dssp SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCC
Confidence 3899987643 579999999999999999999999999996
No 47
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=97.03 E-value=0.00069 Score=55.40 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=43.9
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeecC------ceecC-CCccccCCCChHHHHHHHHHhhhCCC
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIGN------TFCKL-PGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~n------sffkL-PGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
..|+.+.+-+|+++...| .|||.|... ..|.+ |||.+.+||+..++++|.+.+.+|..
T Consensus 27 ~~~~~~~~v~~~i~~~~g--~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~ 91 (190)
T 1hzt_A 27 ADTRLHLAFSSWLFNAKG--QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVE 91 (190)
T ss_dssp ----CEECEEEEEECTTC--CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCC
T ss_pred cCCceEEEEEEEEEcCCC--EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCC
Confidence 567776666666666554 688888642 47899 99999999999999999999999963
No 48
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=97.00 E-value=0.0016 Score=51.70 Aligned_cols=51 Identities=25% Similarity=0.381 Sum_probs=41.1
Q ss_pred eeEEEEEEEEecCCCCeEEEeeec----CceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 91 RTSVEAILLVQEHNHPHILLLQIG----NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 91 RrSVegVLLVH~h~hPHVLLLQ~~----nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+.+|.+|++ + . ..|||+|.. ...|.||||.+.+||+..++++|.+.+.+|.
T Consensus 29 ~~~v~~vi~-~-~--~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl 83 (157)
T 4dyw_A 29 RVGCGAAIV-R-D--GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGI 83 (157)
T ss_dssp EEEEEEEEE-E-T--TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred eeEEEEEEE-E-C--CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCc
Confidence 445544444 3 2 589999875 3589999999999999999999999999996
No 49
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=97.00 E-value=0.0013 Score=54.18 Aligned_cols=69 Identities=25% Similarity=0.339 Sum_probs=50.4
Q ss_pred eEEEeeec----CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCCCCCCCCCCCCCC
Q 039176 107 HILLLQIG----NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITK 182 (282)
Q Consensus 107 HVLLLQ~~----nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt~~YPYlPpHITk 182 (282)
.|||.|.. ...|.||||.+.+||+..++++|.|.+..+.. -.+.++++.+--| +
T Consensus 52 ~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~-------~~~~~~~~~~~~~------------~--- 109 (189)
T 3cng_A 52 KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANAR-------VEIRELYAVYSLP------------H--- 109 (189)
T ss_dssp EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCC-------EEEEEEEEEEEEG------------G---
T ss_pred EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCc-------cccceeEEEEecC------------C---
Confidence 89999875 35899999999999999999999999999962 2344555553211 1
Q ss_pred cceeEEEEEEEccce
Q 039176 183 PKECKKLFLVHLSER 197 (282)
Q Consensus 183 PKE~kKLylV~LPEk 197 (282)
......+|++.....
T Consensus 110 ~~~~~~~f~~~~~~~ 124 (189)
T 3cng_A 110 ISQVYMLFRAKLLDL 124 (189)
T ss_dssp GTEEEEEEEEEECCS
T ss_pred CcEEEEEEEEEeCCC
Confidence 134566788876543
No 50
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=96.97 E-value=0.0011 Score=53.62 Aligned_cols=104 Identities=21% Similarity=0.273 Sum_probs=63.1
Q ss_pred EEEEEEEecCCCCeEEEeeec-----CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCC
Q 039176 94 VEAILLVQEHNHPHILLLQIG-----NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNF 168 (282)
Q Consensus 94 VegVLLVH~h~hPHVLLLQ~~-----nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnF 168 (282)
.-+|+++...| +|||.|.. ...|.+|||.+.+||+..++.+|.+.+..|...+ ..+.++.++.
T Consensus 43 ~v~v~i~~~~~--~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~-------~~~~l~~~~~--- 110 (182)
T 2yvp_A 43 ASFVLPVTERG--TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAE-------TLIPLPSFHP--- 110 (182)
T ss_dssp EEEEEEBCTTS--EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECS-------CEEECCCBCS---
T ss_pred EEEEEEEcCCC--EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcc-------cEEEEEEEeC---
Confidence 33444444444 69988754 2478999999999999999999999999996321 2234554321
Q ss_pred CCCCCCCCCCCCCCcceeEEEEEEEccc-eeeEeeC--CCceEEeecchhhccc
Q 039176 169 ETIMYPYCPPHITKPKECKKLFLVHLSE-REYFAVP--KNLKLLAVPLFELYDN 219 (282)
Q Consensus 169 Et~~YPYlPpHITkPKE~kKLylV~LPE-k~~F~VP--kN~KLlAVPLFELYdN 219 (282)
-| +...+...+|++.... ......+ ......-+|+=|+.+.
T Consensus 111 -------~~---~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 154 (182)
T 2yvp_A 111 -------QP---SFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYAL 154 (182)
T ss_dssp -------CT---TTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHH
T ss_pred -------CC---CccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 11 2234567788877422 1212111 2245556666666544
No 51
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=96.93 E-value=0.0015 Score=52.28 Aligned_cols=102 Identities=17% Similarity=0.263 Sum_probs=63.0
Q ss_pred EEEEEEEecCCCCeEEEeeec-----CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCC
Q 039176 94 VEAILLVQEHNHPHILLLQIG-----NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNF 168 (282)
Q Consensus 94 VegVLLVH~h~hPHVLLLQ~~-----nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnF 168 (282)
+-+|++++ . -+|||.+.. ...|.+|||.+.+||+..++..|.+.+..|. . ...+.++.++..
T Consensus 36 ~v~vii~~-~--~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~-------~~~~~l~~~~~~-- 102 (170)
T 1v8y_A 36 AVAVIALR-E--GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-S-------GDLTYLFSYFVS-- 102 (170)
T ss_dssp EEEEEEEE-T--TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-E-------EEEEEEEEEESC--
T ss_pred eEEEEEEE-C--CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-C-------cCceeeEEEecC--
Confidence 44455555 4 389988752 2479999999999999999999999999995 2 234566665321
Q ss_pred CCCCCCCCCCCCCCcceeEEEEEEEccceeeEeeC--CCceEEeecchhhccc
Q 039176 169 ETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVP--KNLKLLAVPLFELYDN 219 (282)
Q Consensus 169 Et~~YPYlPpHITkPKE~kKLylV~LPEk~~F~VP--kN~KLlAVPLFELYdN 219 (282)
|.+ ..+...+|.+........... ....+.-+|+=|+-+-
T Consensus 103 --------~~~---~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 144 (170)
T 1v8y_A 103 --------PGF---TDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALER 144 (170)
T ss_dssp --------TTT---BCCEEEEEEEEEEEECC--------CEEEEECHHHHHHH
T ss_pred --------CCc---cccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHH
Confidence 111 235566788776543222211 2245556666665443
No 52
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=96.93 E-value=0.0017 Score=50.97 Aligned_cols=41 Identities=32% Similarity=0.581 Sum_probs=36.0
Q ss_pred CeEEEeeecC-----ceecCCCccccCCCChHHHHHHHHHhhhCCC
Q 039176 106 PHILLLQIGN-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 106 PHVLLLQ~~n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
-.|||.|... ..|.+|||.+.+||+..+++.|.+.+..|..
T Consensus 41 ~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~ 86 (158)
T 3hhj_A 41 NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVH 86 (158)
T ss_dssp SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCB
T ss_pred CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcE
Confidence 4799998663 3799999999999999999999999999863
No 53
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=96.91 E-value=0.0015 Score=54.84 Aligned_cols=106 Identities=15% Similarity=0.140 Sum_probs=65.7
Q ss_pred eEEEEEEEEecCCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCC
Q 039176 92 TSVEAILLVQEHNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFET 170 (282)
Q Consensus 92 rSVegVLLVH~h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt 170 (282)
-+|.||++ + . -+|||.|.. ...|.+|||.+.+||+..++..|.+.+..|. +-.+.+.++.+....+..
T Consensus 69 ~~v~~vv~-~-~--~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl-------~v~~~~~l~~~~~~~~~~ 137 (205)
T 3q1p_A 69 VDIRAVVF-Q-N--EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGY-------EVDHFKLLAIFDKEKHQP 137 (205)
T ss_dssp EEEEEEEE-E-T--TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSE-------EEEEEEEEEEEEHHHHSC
T ss_pred ceEEEEEE-E-C--CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCC-------ccccceEEEEEeccccCC
Confidence 45555554 3 2 399999976 5689999999999999999999999999995 234567777765432211
Q ss_pred CCCCCCCCCCCCcceeEEEEEEEccceeeEee-CCCceEEeecchhhc
Q 039176 171 IMYPYCPPHITKPKECKKLFLVHLSEREYFAV-PKNLKLLAVPLFELY 217 (282)
Q Consensus 171 ~~YPYlPpHITkPKE~kKLylV~LPEk~~F~V-PkN~KLlAVPLFELY 217 (282)
|-..- ..+.-+|.+.+.... +.. .....+.-+|+=||-
T Consensus 138 ---~~~~~-----~~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~el~ 176 (205)
T 3q1p_A 138 ---SPSAT-----HVYKIFIGCEIIGGE-KKTSIETEEVEFFGENELP 176 (205)
T ss_dssp ---CCCSS-----CEEEEEEEEEEEEEC-CCCCTTSCCEEEECTTSCC
T ss_pred ---CCCCc-----eEEEEEEEEEecCCc-cCCCCcceEEEEEeHHHhh
Confidence 11111 224456677765432 222 233455566666553
No 54
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=96.86 E-value=0.002 Score=57.42 Aligned_cols=66 Identities=12% Similarity=0.258 Sum_probs=50.1
Q ss_pred HHHHHhhccceeEEEEEEEEecCCCCeEEEeeec--CceecCCCccccCCCChHHHHHHHHHhhhCCCC
Q 039176 81 MKVNYMKEGMRTSVEAILLVQEHNHPHILLLQIG--NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANS 147 (282)
Q Consensus 81 lk~~Y~k~GmRrSVegVLLVH~h~hPHVLLLQ~~--nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~ 147 (282)
..++|...-.+..|.|++++... ..+|||.|.. ...|.+|||.+.+||+..++.+|.+.|..|...
T Consensus 90 ~~~~~~~~~~~v~~v~avv~~~~-~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~ 157 (271)
T 2a6t_A 90 AFDDFLRYKTRIPVRGAIMLDMS-MQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDC 157 (271)
T ss_dssp HHHHHHHHSCCCCEEEEEEBCSS-SSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHhcCCCCCeEEEEEEECC-CCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCc
Confidence 34445555555566666666642 2489999864 468999999999999999999999999999643
No 55
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=96.74 E-value=0.013 Score=49.05 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=62.6
Q ss_pred eEEEeee-cC----ceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCCCCCCCCCCCCC
Q 039176 107 HILLLQI-GN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHIT 181 (282)
Q Consensus 107 HVLLLQ~-~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt~~YPYlPpHIT 181 (282)
.|||.+. .. ..|.+|||.+.+||+..++.+|.|.|..|-.. ...+.++..+. -|.+
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~-------~~~~~l~~~~~----------~~~~-- 121 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGA-------NDLTFLKKLSM----------APSY-- 121 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEE-------EEEEEEEEEEC----------CTTT--
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCc-------CceEEEEEEeC----------CCCc--
Confidence 8999864 22 36899999999999999999999999999521 23456666552 1111
Q ss_pred CcceeEEEEEEEccceeeEee--CCCceEEeecchhhccccccccce
Q 039176 182 KPKECKKLFLVHLSEREYFAV--PKNLKLLAVPLFELYDNVQIWASY 226 (282)
Q Consensus 182 kPKE~kKLylV~LPEk~~F~V--PkN~KLlAVPLFELYdN~~~YGpi 226 (282)
..+...+|++.......... .....+.-+|+=|+.+.. ..|.+
T Consensus 122 -~~~~~~~f~a~~~~~~~~~~~~~E~~~~~w~~~~el~~~~-~~~~i 166 (198)
T 1vhz_A 122 -FSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLL-EDPDF 166 (198)
T ss_dssp -CCCEEEEEEEEEEEECCCCCCCSSCCCEEEEEGGGGGGGG-GCTTT
T ss_pred -cCcEEEEEEEEeCCcccCCCCCCceEEEEEEEHHHHHHHH-HcCCC
Confidence 23556788876533221111 123456677777776653 33443
No 56
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=96.72 E-value=0.0019 Score=48.11 Aligned_cols=40 Identities=23% Similarity=0.492 Sum_probs=35.5
Q ss_pred CeEEEeeecC-----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 106 PHILLLQIGN-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 106 PHVLLLQ~~n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
-.|||.|... ..|.+|||.+.+||+..+++.|.+.+..+.
T Consensus 16 ~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~ 60 (129)
T 1mut_A 16 NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGI 60 (129)
T ss_dssp TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCC
T ss_pred CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCC
Confidence 4899988653 579999999999999999999999999886
No 57
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=96.50 E-value=0.0048 Score=55.52 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=46.3
Q ss_pred cceeEEEEEEEEec--------------CCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 89 GMRTSVEAILLVQE--------------HNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 89 GmRrSVegVLLVH~--------------h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
|...+|..|+..-. .+...|||+|.. +..|.||||.+.+||+..++++|.|.|..+.
T Consensus 108 gp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl 179 (292)
T 1q33_A 108 GPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALN 179 (292)
T ss_dssp EEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSC
T ss_pred CccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 55567887776532 134579999976 5689999999999999999999999999985
No 58
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=96.34 E-value=0.0052 Score=53.98 Aligned_cols=50 Identities=28% Similarity=0.527 Sum_probs=41.1
Q ss_pred eEEEEEEEEecCCCCeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 92 TSVEAILLVQEHNHPHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 92 rSVegVLLVH~h~hPHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
.+|.+|+. + . .+|||.|... ..|.+|||.+.+||+..++.+|.+.|..|.
T Consensus 204 ~~v~~vi~-~-~--~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 257 (341)
T 2qjo_A 204 ITTDAVVV-Q-A--GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRL 257 (341)
T ss_dssp EEEEEEEE-E-T--TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEE-e-C--CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCC
Confidence 45555555 2 2 4899998763 579999999999999999999999999996
No 59
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=96.22 E-value=0.012 Score=52.29 Aligned_cols=40 Identities=30% Similarity=0.435 Sum_probs=36.2
Q ss_pred CeEEEeeecC----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 106 PHILLLQIGN----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 106 PHVLLLQ~~n----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
-+|||.|... ..|.+|||.+.+||+..+++.|.+.|..|.
T Consensus 219 ~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl 262 (352)
T 2qjt_B 219 DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNI 262 (352)
T ss_dssp TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCC
Confidence 4899998763 579999999999999999999999999996
No 60
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=96.21 E-value=0.0056 Score=51.23 Aligned_cols=49 Identities=24% Similarity=0.360 Sum_probs=38.6
Q ss_pred EEEEEEecCCCCeEEEeeec-----CceecCCCcccc-CCCChHHHHHHHHHhhhCC
Q 039176 95 EAILLVQEHNHPHILLLQIG-----NTFCKLPGGRLK-PGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 95 egVLLVH~h~hPHVLLLQ~~-----nsffkLPGGrLr-pgE~eieGLKRkL~~~L~~ 145 (282)
-+|+++... -+|||+|.. ...|.||||.+. +||+..++.+|.|.+..|-
T Consensus 46 v~v~i~~~~--~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl 100 (207)
T 1mk1_A 46 VAIVAMDDN--GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGL 100 (207)
T ss_dssp EEEEECCTT--SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCE
T ss_pred EEEEEEcCC--CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCC
Confidence 344444433 479988743 247899999999 9999999999999999995
No 61
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=96.14 E-value=0.0074 Score=47.25 Aligned_cols=39 Identities=28% Similarity=0.390 Sum_probs=33.8
Q ss_pred CeEEEeeecC-----ceecCCCccccCCCChH-HHHHHHHHhhhC
Q 039176 106 PHILLLQIGN-----TFCKLPGGRLKPGENEI-EGLKRKLTSKLG 144 (282)
Q Consensus 106 PHVLLLQ~~n-----sffkLPGGrLrpgE~ei-eGLKRkL~~~L~ 144 (282)
-+|||.|... ..|.+|||.+.+||+.. +++.|.+.+.++
T Consensus 34 ~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g 78 (155)
T 1x51_A 34 AQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAG 78 (155)
T ss_dssp EEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhC
Confidence 4788888653 47999999999999985 999999999987
No 62
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=96.04 E-value=0.0095 Score=53.41 Aligned_cols=50 Identities=20% Similarity=0.251 Sum_probs=41.0
Q ss_pred EEEEEEEecCCCCeEEEeeecC---ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 94 VEAILLVQEHNHPHILLLQIGN---TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 94 VegVLLVH~h~hPHVLLLQ~~n---sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
+.+++++... -+|||.|... ..|.||||.+.+||+..++..|.+.|..|.
T Consensus 141 ~~viv~v~~~--~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl 193 (269)
T 1vk6_A 141 PCIIVAIRRD--DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGI 193 (269)
T ss_dssp EEEEEEEEET--TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cEEEEEEEeC--CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCc
Confidence 4444555544 4899999753 589999999999999999999999999996
No 63
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=96.04 E-value=0.019 Score=48.71 Aligned_cols=121 Identities=22% Similarity=0.300 Sum_probs=73.2
Q ss_pred HHHhhccceeEEEEEEEEec--------CCCCeEEEeeecCceecCCCccccCCC-ChHHHHHHHHHhhhCCCCCCCCCC
Q 039176 83 VNYMKEGMRTSVEAILLVQE--------HNHPHILLLQIGNTFCKLPGGRLKPGE-NEIEGLKRKLTSKLGANSPALVPD 153 (282)
Q Consensus 83 ~~Y~k~GmRrSVegVLLVH~--------h~hPHVLLLQ~~nsffkLPGGrLrpgE-~eieGLKRkL~~~L~~~~~~~~~~ 153 (282)
+....-|.++++.+++..-. .+-.+|||.|.....|.+|||.+.+|| +..+++.|.|.+..|...... .
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~--~ 102 (212)
T 1u20_A 25 ESLQLEGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATV--E 102 (212)
T ss_dssp HHHSCSSCEEEEEEEEEEECCCEETTTEECCEEEEEEEETTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGC--C
T ss_pred HHhhcCCCcccceEEEeCCCceEEEEEEecCCEEEEEEeCCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCcccc--c
Confidence 55555566777766654321 112367777766778999999999999 999999999999999633211 0
Q ss_pred eEeeeeeeeeeCCCCCCCCCCCCCCCCCCcceeEEEEEEEccceeeEe---------eC--CCceEEeecchhhccc
Q 039176 154 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFA---------VP--KNLKLLAVPLFELYDN 219 (282)
Q Consensus 154 WeVGe~Lg~WWRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~F~---------VP--kN~KLlAVPLFELYdN 219 (282)
..+.++++.... .|| -.....+|++.+.....-. -. .-..+.-+|+-+|.+.
T Consensus 103 l~~~~~~~~~~~------~~~--------~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 103 VTEDDYRSSQVR------EHP--------QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp CCGGGEEEEEEE------CTT--------SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred eeeeeEEEeccc------cCC--------CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 112233443211 122 1345668888876432110 01 1145777888888654
No 64
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=95.71 E-value=0.026 Score=51.25 Aligned_cols=54 Identities=13% Similarity=0.212 Sum_probs=44.4
Q ss_pred CCCCeEEEeeec-CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 103 HNHPHILLLQIG-NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 103 h~hPHVLLLQ~~-nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
.+.+.|||+|.. ...|.+|||.+.+||+..++..|.+.|..|. +-.++++++..
T Consensus 35 ~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl-------~~~~~~~l~~~ 89 (364)
T 3fjy_A 35 LDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGS-------PVKLGPYLCEV 89 (364)
T ss_dssp HTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSC-------CEEEEEEEEEE
T ss_pred CCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCC-------eeeeccccceE
Confidence 345689999876 4789999999999999999999999999995 23566677643
No 65
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=95.66 E-value=0.024 Score=47.57 Aligned_cols=109 Identities=18% Similarity=0.287 Sum_probs=64.9
Q ss_pred eEEEEEEEEecC-CCCeEEEeee-c----CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeC
Q 039176 92 TSVEAILLVQEH-NHPHILLLQI-G----NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWR 165 (282)
Q Consensus 92 rSVegVLLVH~h-~hPHVLLLQ~-~----nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWR 165 (282)
.+|..+.++... +..+|||++- . ...|.||||.+.+||+..++.+|.|.|..|-.. ...+.++.++.
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~-------~~~~~l~~~~~ 134 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKG-------DIAECSPAVCM 134 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCC-------EEEEECCCEES
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCc-------cceEEeccEEc
Confidence 345444444332 2468888763 2 237999999999999999999999999999632 23344444321
Q ss_pred CCCCCCCCCCCCCCCCCcceeEEEEEEEcc--cee----eEee--CCCceEEeecchhhcccc
Q 039176 166 PNFETIMYPYCPPHITKPKECKKLFLVHLS--ERE----YFAV--PKNLKLLAVPLFELYDNV 220 (282)
Q Consensus 166 PnFEt~~YPYlPpHITkPKE~kKLylV~LP--Ek~----~F~V--PkN~KLlAVPLFELYdN~ 220 (282)
. | ....|...+|++.+. ... .... .....+.-+|+=|+.+..
T Consensus 135 ~----------~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 184 (212)
T 2dsc_A 135 D----------P---GLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRL 184 (212)
T ss_dssp C----------T---TTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHH
T ss_pred C----------C---CccCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHH
Confidence 0 1 112355667766532 110 1111 144567778887776554
No 66
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=95.43 E-value=0.021 Score=48.20 Aligned_cols=113 Identities=13% Similarity=0.148 Sum_probs=68.1
Q ss_pred EEEEEEEecCCCCeEEEee-ec---------CceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 94 VEAILLVQEHNHPHILLLQ-IG---------NTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 94 VegVLLVH~h~hPHVLLLQ-~~---------nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
.-+|++++. +-.+|||++ .. ...+.+|||.+.+||+..++.+|.|.|..|-.. ..|+ .++..
T Consensus 59 av~vl~~~~-~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~----~~~~---~l~~~ 130 (209)
T 1g0s_A 59 AAVLLPFDP-VRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIV----KRTK---PVLSF 130 (209)
T ss_dssp EEEEEEEET-TTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCC----CCEE---EEEEE
T ss_pred EEEEEEEEC-CCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCccc----CcEE---EeEEE
Confidence 334455552 224788874 32 135789999999999999999999999999633 2332 45543
Q ss_pred eCCCCCCCCCCCCCCCCCCcceeEEEEEEEcccee--e-E---eeCCCceEEeecchhhccccccccceec
Q 039176 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSERE--Y-F---AVPKNLKLLAVPLFELYDNVQIWASYFN 228 (282)
Q Consensus 164 WRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~--~-F---~VPkN~KLlAVPLFELYdN~~~YGpiIs 228 (282)
+. -|. ...|...+|++...... - . .-.....+.-+|+=|+.+-. .-|.|..
T Consensus 131 ~~----------~~g---~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i-~~g~i~d 187 (209)
T 1g0s_A 131 LA----------SPG---GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWV-EEGKIDN 187 (209)
T ss_dssp ES----------CTT---TBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHH-HTTSSCB
T ss_pred ec----------CCC---ccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHH-HcCCCCC
Confidence 21 011 12466788988853221 1 1 11123577888988887654 3354443
No 67
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=95.06 E-value=0.0072 Score=54.34 Aligned_cols=112 Identities=23% Similarity=0.327 Sum_probs=71.9
Q ss_pred ccceeEEEEEEEEecC-------CCCeEEEeeec-CceecCCCccccCCC-ChHHHHHHHHHhhhCCCCCCCCCCeEeee
Q 039176 88 EGMRTSVEAILLVQEH-------NHPHILLLQIG-NTFCKLPGGRLKPGE-NEIEGLKRKLTSKLGANSPALVPDWQIGE 158 (282)
Q Consensus 88 ~GmRrSVegVLLVH~h-------~hPHVLLLQ~~-nsffkLPGGrLrpgE-~eieGLKRkL~~~L~~~~~~~~~~WeVGe 158 (282)
.|-|+.+.+.|-+-.. ..-|.+|+|.. ...|.+|||++.+|| +..++|+|.|.+.++... -+.++
T Consensus 18 ~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~------V~~~~ 91 (214)
T 3kvh_A 18 PGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLR------LTEAD 91 (214)
T ss_dssp TTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---C------CCGGG
T ss_pred cCccEeeEEEEEcCCccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCee------eeeee
Confidence 3678888888777532 23478899987 669999999999999 999999999988887410 11122
Q ss_pred eeeeeeCCCCCCCCCCCCCCCCCCcceeEEEEEEEccceeeEeeC------C-----CceEEeecchhhccc
Q 039176 159 CVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVP------K-----NLKLLAVPLFELYDN 219 (282)
Q Consensus 159 ~Lg~WWRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~F~VP------k-----N~KLlAVPLFELYdN 219 (282)
.+..- ..-|| .++ +--.|.+++.+.....+- + ++=++-|||+.+-|.
T Consensus 92 y~~s~------~~~yp---~~V-----~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~ 149 (214)
T 3kvh_A 92 YLSSH------LTEGP---HRV-----VAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDR 149 (214)
T ss_dssp EEEEE------EC-------CE-----EEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTS
T ss_pred eEEEE------eccCC---CEE-----EEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccC
Confidence 22211 11244 233 345788888765433211 2 355899999999885
No 68
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=94.86 E-value=0.018 Score=49.64 Aligned_cols=97 Identities=25% Similarity=0.328 Sum_probs=60.3
Q ss_pred eEEEeeecCceecCCCccccCCC-ChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeCCCCCCCCCCCCCCCCCCcce
Q 039176 107 HILLLQIGNTFCKLPGGRLKPGE-NEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRPNFETIMYPYCPPHITKPKE 185 (282)
Q Consensus 107 HVLLLQ~~nsffkLPGGrLrpgE-~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWRPnFEt~~YPYlPpHITkPKE 185 (282)
.+|+++.....|.+|||.+.+|| +..++++|.|.+..|-.... ..+..-+.++.. |.+ .+.+
T Consensus 66 ~~ll~~r~~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~--~~l~~l~~~~~~--~~~-------------~~~~ 128 (217)
T 2xsq_A 66 AILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAA--FRVERTDYRSSH--VGS-------------GPRV 128 (217)
T ss_dssp EEEEEEETTSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGG--CCCCGGGEEEEE--ECS-------------SSSE
T ss_pred cEEEEEccCCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCcc--ceeEEEEEEeec--CCC-------------CCeE
Confidence 45555555678999999999999 99999999999999863221 112111111110 111 1345
Q ss_pred eEEEEEEEccceeeEe-----------eCCCceEEeecchhhcccc
Q 039176 186 CKKLFLVHLSEREYFA-----------VPKNLKLLAVPLFELYDNV 220 (282)
Q Consensus 186 ~kKLylV~LPEk~~F~-----------VPkN~KLlAVPLFELYdN~ 220 (282)
..-+|.+.++...... -+.-+.+..|||-+|.|..
T Consensus 129 ~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~ 174 (217)
T 2xsq_A 129 VAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGV 174 (217)
T ss_dssp EEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSS
T ss_pred EEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhhhcc
Confidence 6667888887543210 0122678889999987653
No 69
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=94.72 E-value=0.04 Score=45.61 Aligned_cols=104 Identities=13% Similarity=0.233 Sum_probs=64.1
Q ss_pred EEEEEEecCCCCeEEEeee-----------cCceecCCCccccCCCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeee
Q 039176 95 EAILLVQEHNHPHILLLQI-----------GNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIW 163 (282)
Q Consensus 95 egVLLVH~h~hPHVLLLQ~-----------~nsffkLPGGrLrpgE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~W 163 (282)
-+|++++.. -..|||++- +...|.||||.+. ||+..++.+|.|.+..|... ..+ +.++..
T Consensus 48 v~v~~~~~~-~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~----~~~---~~l~~~ 118 (191)
T 3o6z_A 48 ATILLYNTK-KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEV----GEV---RKLFEL 118 (191)
T ss_dssp EEEEEEETT-TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCC----SCE---EEEEEE
T ss_pred EEEEEEECC-CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCcc----CcE---EEEEEE
Confidence 344444432 247888763 3457899999999 99999999999999999633 122 345543
Q ss_pred eCCCCCCCCCCCCCCCCCCcceeEEEEEEEccceeeEe-----eCCCceEEeecchhhcccc
Q 039176 164 WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFA-----VPKNLKLLAVPLFELYDNV 220 (282)
Q Consensus 164 WRPnFEt~~YPYlPpHITkPKE~kKLylV~LPEk~~F~-----VPkN~KLlAVPLFELYdN~ 220 (282)
+- . | ....+...+|++......... -.....+.-+|+=|+.+-.
T Consensus 119 ~~---------~-~---~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~ 167 (191)
T 3o6z_A 119 YM---------S-P---GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMI 167 (191)
T ss_dssp ES---------C-T---TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHH
T ss_pred Ee---------C-C---CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHH
Confidence 21 0 1 123456778888865422111 1245577778887776654
No 70
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=94.02 E-value=0.1 Score=45.69 Aligned_cols=65 Identities=14% Similarity=0.383 Sum_probs=45.7
Q ss_pred cceeEEEEEEEEecCCCCeEEEeeecC--------ceecC-CCccccCCCC--h----HHHHHHHHHhhhCCCCCCCCCC
Q 039176 89 GMRTSVEAILLVQEHNHPHILLLQIGN--------TFCKL-PGGRLKPGEN--E----IEGLKRKLTSKLGANSPALVPD 153 (282)
Q Consensus 89 GmRrSVegVLLVH~h~hPHVLLLQ~~n--------sffkL-PGGrLrpgE~--e----ieGLKRkL~~~L~~~~~~~~~~ 153 (282)
..+.-|-++++.+ . -.||+.|... ..|.+ |||++.+||+ + .++++|.|.+.++. +
T Consensus 65 ~~~q~i~~~II~~-~--grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl-------~ 134 (211)
T 3e57_A 65 TTKQVIPYVVIMD-G--DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDV-------S 134 (211)
T ss_dssp TEEEEEEEEEEEE-T--TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEE-------E
T ss_pred cccceEEEEEEEE-C--CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCC-------e
Confidence 3444555555554 3 3799999752 25677 9999999998 5 89999999999995 3
Q ss_pred eEeeeeeeee
Q 039176 154 WQIGECVAIW 163 (282)
Q Consensus 154 WeVGe~Lg~W 163 (282)
.+...++|.-
T Consensus 135 v~~~~~ig~~ 144 (211)
T 3e57_A 135 LRELEFLGLI 144 (211)
T ss_dssp EEEEEEEEEE
T ss_pred eeccEEEEEE
Confidence 4556677764
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=93.02 E-value=0.21 Score=43.52 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=44.5
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeecC------ceecCC-CccccCC------CCh---HHHHHHHHHhhhCCC
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIGN------TFCKLP-GGRLKPG------ENE---IEGLKRKLTSKLGAN 146 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~n------sffkLP-GGrLrpg------E~e---ieGLKRkL~~~L~~~ 146 (282)
+.|+.+.+-+|+++...| .|||.|... ..|.+| ||.+.+| |+. .++.+|+|.+.+|..
T Consensus 54 ~~g~~h~av~v~v~~~~g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~ 127 (235)
T 2dho_A 54 EKGLLHRAFSVFLFNTEN--KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIP 127 (235)
T ss_dssp TTTCCEEEEEEEEECTTC--CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCC
T ss_pred CCCceEEEEEEEEEcCCC--EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCC
Confidence 568888777777776655 677766543 267888 5999999 664 799999999999964
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=92.18 E-value=0.089 Score=46.37 Aligned_cols=56 Identities=21% Similarity=0.450 Sum_probs=42.4
Q ss_pred ceeEEEEEEEEecCCC-CeEEEeeecCc------eecCCCccccCCCCh--------------------HHHHHHHHHhh
Q 039176 90 MRTSVEAILLVQEHNH-PHILLLQIGNT------FCKLPGGRLKPGENE--------------------IEGLKRKLTSK 142 (282)
Q Consensus 90 mRrSVegVLLVH~h~h-PHVLLLQ~~ns------ffkLPGGrLrpgE~e--------------------ieGLKRkL~~~ 142 (282)
.|.+.-.|++....+- ++|||+|...+ .|-+|||++.++|.+ ..+..|.+.|.
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 4555555555543333 89999997632 588999999999986 78999999999
Q ss_pred hCC
Q 039176 143 LGA 145 (282)
Q Consensus 143 L~~ 145 (282)
.|.
T Consensus 87 ~Gl 89 (232)
T 3qsj_A 87 IGW 89 (232)
T ss_dssp HSC
T ss_pred hCc
Confidence 986
No 73
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=91.98 E-value=0.33 Score=42.71 Aligned_cols=59 Identities=17% Similarity=0.284 Sum_probs=45.2
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeecC------ceecCCC-ccccCC------CCh---HHHHHHHHHhhhCCCC
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIGN------TFCKLPG-GRLKPG------ENE---IEGLKRKLTSKLGANS 147 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~n------sffkLPG-GrLrpg------E~e---ieGLKRkL~~~L~~~~ 147 (282)
+.|+.+.+-+|++....| .|||.|... ..|.+|+ |.+.+| |+. .++.+|+|.+.+|...
T Consensus 65 ~~g~~h~av~v~v~~~~g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~ 139 (246)
T 2pny_A 65 EKGLLHRAFSVVLFNTKN--RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPG 139 (246)
T ss_dssp TTTCCEEEEEEEEECTTC--CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCT
T ss_pred CCCcEEEEEEEEEEeCCC--EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCc
Confidence 568888777787776655 677766543 2577884 999999 776 8999999999999743
No 74
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=91.15 E-value=0.18 Score=46.46 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=33.8
Q ss_pred CeEEEeeecC-----ceecCCCccccCCCChHHHHHHHHHhhhCC
Q 039176 106 PHILLLQIGN-----TFCKLPGGRLKPGENEIEGLKRKLTSKLGA 145 (282)
Q Consensus 106 PHVLLLQ~~n-----sffkLPGGrLrpgE~eieGLKRkL~~~L~~ 145 (282)
-.|||.|... ..|.+|||.+.+| +..+++.|.+.+.++.
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl 295 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGL 295 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSC
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCC
Confidence 4799988763 4799999999999 9999999999998875
No 75
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=90.19 E-value=0.37 Score=41.66 Aligned_cols=92 Identities=13% Similarity=0.109 Sum_probs=58.3
Q ss_pred ceecCCCccccC-CCChHHHHHHHHHhhhCCCCCCCCCCeEeeeeeeeeeC-CCCCCCCCCCCCCCCCCcceeEEEEEEE
Q 039176 116 TFCKLPGGRLKP-GENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWR-PNFETIMYPYCPPHITKPKECKKLFLVH 193 (282)
Q Consensus 116 sffkLPGGrLrp-gE~eieGLKRkL~~~L~~~~~~~~~~WeVGe~Lg~WWR-PnFEt~~YPYlPpHITkPKE~kKLylV~ 193 (282)
..|.||||.+.+ ||+..++.+|.|.+..|-..+ ...|. .++.++- |. ...+...+|++.
T Consensus 95 ~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~--~~~l~---~l~~~~~~~g--------------~~~~~~~~f~a~ 155 (218)
T 3q91_A 95 VTVELCAGLVDQPGLSLEEVACKEAWEECGYHLA--PSDLR---RVATYWSGVG--------------LTGSRQTMFYTE 155 (218)
T ss_dssp EEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCC--GGGCE---EEEEEEEC-----------------CCEEEEEEEEE
T ss_pred eEEECCcceeCCCCCCHHHHHHHHHHHHhCCccc--cCceE---EEEEEecCCC--------------ccceEEEEEEEE
Confidence 367899999999 999999999999999996331 12232 3444321 11 235667788887
Q ss_pred ccceeeE-------eeCCCceEEeecchhhcccccccccee
Q 039176 194 LSEREYF-------AVPKNLKLLAVPLFELYDNVQIWASYF 227 (282)
Q Consensus 194 LPEk~~F-------~VPkN~KLlAVPLFELYdN~~~YGpiI 227 (282)
....... .=.....+.-+|+=|+.+-. .-|.|-
T Consensus 156 ~~~~~~~~~~~~~~d~~E~~ev~wv~l~el~~~i-~~g~i~ 195 (218)
T 3q91_A 156 VTDAQRSGPGGGLVEEGELIEVVHLPLEGAQAFA-DDPDIP 195 (218)
T ss_dssp ECGGGBCC---------CCEEEEEEEGGGHHHHH-HCTTSC
T ss_pred ECCcccccCCCCCCCCCcEEEEEEEEHHHHHHHH-HcCCCC
Confidence 6543211 11145677888888877654 446653
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=73.08 E-value=7.2 Score=35.80 Aligned_cols=66 Identities=15% Similarity=0.148 Sum_probs=45.6
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHhhh-CCCCCCCCCCeEeeeeeeeeeC
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKL-GANSPALVPDWQIGECVAIWWR 165 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~~L-~~~~~~~~~~WeVGe~Lg~WWR 165 (282)
..|.+-.| |+|+.++ -.|||. -.+. |.||||.+ +|++.++..|...+.. +- +-+++.+++.|=.
T Consensus 179 ~~~p~~~v-gaii~~~---g~vLL~-~~~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl-------~v~~~~L~~v~~~ 243 (321)
T 3rh7_A 179 AVEGEIRL-GAVLEQQ---GAVFLA-GNET-LSLPNCTV--EGGDPARTLAAYLEQLTGL-------NVTIGFLYSVYED 243 (321)
T ss_dssp HHHSCEEE-EEEEESS---SCEEEB-CSSE-EBCCEEEE--SSSCHHHHHHHHHHHHHSS-------CEEEEEEEEEEEC
T ss_pred ccCCcceE-EEEEEEC---CEEEEe-eCCC-ccCCcccC--CCChhHHHHHHHHHHhcCC-------EEeeceEEEEEEc
Confidence 34666666 6666665 357777 5567 99999866 5555557778877776 63 5678999998755
Q ss_pred CC
Q 039176 166 PN 167 (282)
Q Consensus 166 Pn 167 (282)
+.
T Consensus 244 ~~ 245 (321)
T 3rh7_A 244 KS 245 (321)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 77
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=68.52 E-value=7.3 Score=35.69 Aligned_cols=60 Identities=10% Similarity=0.022 Sum_probs=42.4
Q ss_pred hccceeEEEEE-EEEecCCCCeEEEeeecCc------ee-cCCCccccCCCChHHHHHHHHHhhhCCC
Q 039176 87 KEGMRTSVEAI-LLVQEHNHPHILLLQIGNT------FC-KLPGGRLKPGENEIEGLKRKLTSKLGAN 146 (282)
Q Consensus 87 k~GmRrSVegV-LLVH~h~hPHVLLLQ~~ns------ff-kLPGGrLrpgE~eieGLKRkL~~~L~~~ 146 (282)
..|+.+..--| +.+...+-..||+-|...+ .| ..+||.+.+||+..++..|.+.+.+|..
T Consensus 113 ~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~ 180 (300)
T 3dup_A 113 TFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLP 180 (300)
T ss_dssp GGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred ccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence 35766554444 4443333447776665532 34 5889999999999999999999999963
No 78
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=27.43 E-value=32 Score=27.80 Aligned_cols=37 Identities=30% Similarity=0.568 Sum_probs=26.7
Q ss_pred hccceeEEEEEEEEecCCCCeEEEeeecCceecCCCccccCCCChHHHHHHHHHh
Q 039176 87 KEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTS 141 (282)
Q Consensus 87 k~GmRrSVegVLLVH~h~hPHVLLLQ~~nsffkLPGGrLrpgE~eieGLKRkL~~ 141 (282)
+..++....+||++|-| |+|-..|.+.|++--+ +|.+
T Consensus 61 ~~Al~~~A~~vIl~HNH-----------------PSG~~~PS~~D~~~T~-~l~~ 97 (126)
T 2qlc_A 61 KAAIRESAHSIILVHNH-----------------PSGDVQPSNADKQVTS-ILKK 97 (126)
T ss_dssp HHHHHTTCSEEEEEEEC-----------------SSSCCSCCHHHHHHHH-HHHH
T ss_pred HHHHHcCCcEEEEEecC-----------------CCCCCCCCHHHHHHHH-HHHH
Confidence 34455566899999966 8999999988877443 4433
Done!